View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14726_low_33 (Length: 248)
Name: NF14726_low_33
Description: NF14726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14726_low_33 |
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Alignment Details
Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 49704201 - 49704422
Alignment:
| Q |
18 |
agaaagatatcttgtatttccgattttattattctatagctgtataaagtttgatcattcatttaaaatccttggataccaagcttaggtgatgagaatg |
117 |
Q |
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| T |
49704201 |
agaaagatatcttgtatttccgattttattattctatagctgtataaagtttgatcattcatttaaaatccttggataccaagcttaggtgatgagaatg |
49704300 |
T |
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| Q |
118 |
gtaaattacttgattgttcttcacacttactgtaaaacattttccatttttattttcaacaatattgtgttaaatataatttgctaacaaaaaagataat |
217 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49704301 |
gtaaattacttgattgttcgtcacacttactgtaaaacattttccatttttattttcaacaatattgtgttaaatataatttgctaacaaaaaagataat |
49704400 |
T |
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| Q |
218 |
aattgttcctaacatttcatct |
239 |
Q |
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|||||||||||||||||||||| |
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| T |
49704401 |
aattgttcctaacatttcatct |
49704422 |
T |
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