View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14728_high_2 (Length: 638)

Name: NF14728_high_2
Description: NF14728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14728_high_2
NF14728_high_2
[»] chr7 (2 HSPs)
chr7 (16-452)||(23021460-23021896)
chr7 (498-590)||(32749584-32749675)
[»] chr1 (4 HSPs)
chr1 (441-604)||(45455187-45455350)
chr1 (459-619)||(37823215-37823375)
chr1 (450-569)||(33167875-33167994)
chr1 (450-569)||(29524561-29524680)
[»] chr4 (1 HSPs)
chr4 (450-612)||(18468652-18468813)
[»] chr2 (4 HSPs)
chr2 (450-619)||(39490739-39490907)
chr2 (450-619)||(17928491-17928660)
chr2 (460-619)||(36208777-36208935)
chr2 (450-583)||(1308034-1308170)
[»] chr8 (5 HSPs)
chr8 (460-617)||(43523573-43523730)
chr8 (450-619)||(44150496-44150665)
chr8 (460-619)||(29732295-29732453)
chr8 (450-564)||(13783481-13783595)
chr8 (450-569)||(38204624-38204743)
[»] chr6 (1 HSPs)
chr6 (450-618)||(24349093-24349262)
[»] chr5 (2 HSPs)
chr5 (450-619)||(39009119-39009287)
chr5 (469-601)||(23090054-23090186)
[»] chr3 (2 HSPs)
chr3 (450-601)||(49026711-49026863)
chr3 (450-601)||(11908553-11908704)


Alignment Details
Target: chr7 (Bit Score: 356; Significance: 0; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 16 - 452
Target Start/End: Original strand, 23021460 - 23021896
Alignment:
Q  16 aatatccacttgatcaccatacatttattaaagttcagtctgatattgaataataatgtcatgtttgtctgtttcacctaatgcactagtaactttattt 115  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23021460 aatatccactggatcaccatacatttattaaagttcagtctgatattgaataataatgtcatgtttgtctgtttcacctaatgcactagtaactttattt 23021559  T
Q  116 gatgcttttgaaaggttatgagagtcgtacaacacacatgtgttatcttatgacacattgaaataatgcaaacatggatcattaaatttggagggaaatg 215  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23021560 gatgcttttgaaaggttctgagagtcgtacaacacacatgtgttatcttatgacacattgaaataatgcaaacatggatcattaaatttggagggaaatg 23021659  T
Q  216 aaggataacnnnnnnngagagaaaatgaaaatgaaggataactatcactatttacatgttgcgtcaggaagattaaaacatcaccaagtggcaagtacca 315  Q
    |||||||||       |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||    
T  23021660 aaggataacttttattgagagaaaatgaaaatgaaggataacaatcactatttacatgttgcg-caggaagattaaaacatcaccaagaggcaaggacca 23021758  T
Q  316 actactac-acaaaattggaaaaattacgttgtacttgtctactagtgatatcaaatggaaac---attaataaacggaaaaatatcagttggaaatggt 411  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  23021759 actactacaacaaaattggaaaaattacgttgtacttgtctactagtgatatcaaatggaaacattattaataaacggaaaaatatcagttggaaatggt 23021858  T
Q  412 ttgcagttaaagctctggaccaccaccaataatgcatcaga 452  Q
    ||||||||||||||||||   ||||||||||||||||||||    
T  23021859 ttgcagttaaagctctgg---accaccaataatgcatcaga 23021896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 498 - 590
Target Start/End: Complemental strand, 32749675 - 32749584
Alignment:
Q  498 cattggagaagggttattgaagatgatgtggatgaaagagatgataaaccaattcaacaagttgaaagtctgccaccgtatgccacgcgtcgc 590  Q
    ||||||||||| | ||||||| |||| |||||||||||||||||| ||| | ||||||| ||||||| ||||  |||| ||||||||||||||    
T  32749675 cattggagaagaggtattgaaaatgaggtggatgaaagagatgatgaactatttcaacatgttgaaattctg-aaccggatgccacgcgtcgc 32749584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 4e-61; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 441 - 604
Target Start/End: Original strand, 45455187 - 45455350
Alignment:
Q  441 taatgcatcagaccacctccaatggagttattgaaagccattttcaacttattgaatcattggagaagggttattgaagatgatgtggatgaaagagatg 540  Q
    |||||| | |||||||| ||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45455187 taatgcgttagaccacccccaatggggttattgaaagtcattttcaatttattgaaccattggagaagggttattgaagatgatgtggatgaaagagatg 45455286  T
Q  541 ataaaccaattcaacaagttgaaagtctgccaccgtatgccacgcgtcgcgtttctgttggttc 604  Q
    || |||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  45455287 atgaaccaattcaacaagttgaaagtctgccacggtatgccacgcagcgcgtttctgttggttc 45455350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 459 - 619
Target Start/End: Complemental strand, 37823375 - 37823215
Alignment:
Q  459 ccaatggagttattgaaagccattttcaacttattgaatcattggagaagggttattgaagatgatgtggatgaaagagatgataaaccaattcaacaag 558  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||    
T  37823375 ccaatggggttattgaaagtcattttcaacttattgaaccattggagaagggttattgaacatgatgtggatgaaagagatgatgaaccaattcaataag 37823276  T
Q  559 ttgaaagtctgccaccgtatgccacgcgtcgcgtttctgttggttcatttgggcgcgtgtg 619  Q
    |||||||| |||||| |||||||| ||   |||||||||||||||| ||| ||||||||||    
T  37823275 ttgaaagtttgccacggtatgccatgcagtgcgtttctgttggttctttttggcgcgtgtg 37823215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 450 - 569
Target Start/End: Complemental strand, 33167994 - 33167875
Alignment:
Q  450 agaccacctccaatggagttattgaaagccattttcaacttattgaatcattggagaagggttattgaagatgatgtggatgaaagagatgataaaccaa 549  Q
    |||||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  33167994 agaccacccccaatggggttattgaaagccattttcaacctattgaaccattggagaagggttattgaagatgatgtggatgaaagagatgatgaaccaa 33167895  T
Q  550 ttcaacaagttgaaagtctg 569  Q
    ||||||| ||||||| ||||    
T  33167894 ttcaacatgttgaaaatctg 33167875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 450 - 569
Target Start/End: Complemental strand, 29524680 - 29524561
Alignment:
Q  450 agaccacctccaatggagttattgaaagccattttcaacttattgaatcattggagaagggttattgaagatgatgtggatgaaagagatgataaaccaa 549  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||  |    
T  29524680 agaccacctccaatggggttattgaaagtcattttcaacctattgaaccattggagaaggcttattgaagatgatgtggatgaaagagatgatgaacata 29524581  T
Q  550 ttcaacaagttgaaagtctg 569  Q
    ||||||| ||||||| ||||    
T  29524580 ttcaacatgttgaaaatctg 29524561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 1e-55; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 450 - 612
Target Start/End: Original strand, 18468652 - 18468813
Alignment:
Q  450 agaccacctccaatggagttattgaaagccattttcaacttattgaatcattggagaagggttattgaagatgatgtggatgaaagagatgataaaccaa 549  Q
    ||||||||  |||||| |||||||||||||||||||||||  || || ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18468652 agaccacccacaatggggttattgaaagccattttcaactatttaaaccattggagaagggttattgaagatgatgtggatgaaagagatgatgaaccaa 18468751  T
Q  550 ttcaacaagttgaaagtctgccaccgtatgccacgcgtcgcgtttctgttggttcatttgggc 612  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||| ||| ||||||||    
T  18468752 ttcaacaagttgaaagtctgtca-cgtatgccacgcgtcgcgtttctgttcgttgatttgggc 18468813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 4e-55; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 450 - 619
Target Start/End: Complemental strand, 39490907 - 39490739
Alignment:
Q  450 agaccacctccaatggagttattgaaagccattttcaacttattgaatcattggagaagggttattgaagatgatgtggatgaaagagatgataaaccaa 549  Q
    ||||||||  |||||| |||||||||||||||||||||||  || || |||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  39490907 agaccacccacaatggggttattgaaagccattttcaactatttaaaccattagagaagggttattgaagatgatgtggatgaaagagatgatgaaccaa 39490808  T
Q  550 ttcaacaagttgaaagtctgccaccgtatgccacgcgtcgcgtttctgttggttcatttgggcgcgtgtg 619  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||| |||| ||| |||||||||||||||    
T  39490807 ttcaacaagttgaaagtttgcca-cgtatgccacgcgtcgcgtttatgttcgttgatttgggcgcgtgtg 39490739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 450 - 619
Target Start/End: Original strand, 17928491 - 17928660
Alignment:
Q  450 agaccacctccaatggagttattgaaagccattttcaacttattgaatc-attggagaaggg-ttattgaagatgatgtggatgaaagagatgataaacc 547  Q
    ||||||||  |||||| |||||||||||||||||||| || |||||| | |||||||||||| || ||||| ||||||||||||||||||||||| ||||    
T  17928491 agaccacccacaatggggttattgaaagccattttcatct-attgaaactattggagaaggggttgttgaaaatgatgtggatgaaagagatgatgaacc 17928589  T
Q  548 aattcaacaagttgaaagtctgccaccgtatgccacgcgtcgcgtttctgttggttcatttgggcgcgtgtg 619  Q
    | ||||||| |||||||||||| |||||||| ||||| ||||||||||||||||||| ||| ||||||||||    
T  17928590 atttcaacatgttgaaagtctg-caccgtataccacgtgtcgcgtttctgttggttctttttggcgcgtgtg 17928660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 460 - 619
Target Start/End: Original strand, 36208777 - 36208935
Alignment:
Q  460 caatggagttattgaaagccattttcaacttattgaatcattggagaagggttattgaagatgatgtggatgaaagagatgataaaccaattcaacaagt 559  Q
    |||||| |||||| ||||| ||||| ||||  || || ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36208777 caatggggttattaaaagctatttttaactatttaaaccattgaagaagggttattgaagatgatgtggatgaaagagatgatgaaccaattcaacaagt 36208876  T
Q  560 tgaaagtctgccaccgtatgccacgcgtcgcgtttctgttggttcatttgggcgcgtgtg 619  Q
    | ||||||| ||| || |||  |||||| ||||||||||| ||| |||||||||| ||||    
T  36208877 taaaagtctacca-cgcatgttacgcgttgcgtttctgttcgttgatttgggcgcatgtg 36208935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 450 - 583
Target Start/End: Original strand, 1308034 - 1308170
Alignment:
Q  450 agaccacctccaatggagttattgaaagccattttcaacttattgaatc-attggagaaggg----ttattgaagatgatgtggatgaaagagatgataa 544  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||| | ||||||||||||    ||| |||| |||||||| |||||||||||||| |    
T  1308034 agaccacccccaattgagttattgaaagccattttcaact-attgaaaccattggagaagggggggttactgaaaatgatgtgaatgaaagagatgatga 1308132  T
Q  545 accaattcaacaagttgaaagtctgccaccgtatgccac 583  Q
    |||| ||||||| ||||||| |||| |||||||||||||    
T  1308133 accatttcaacatgttgaaaatctg-caccgtatgccac 1308170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 9e-47; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 460 - 617
Target Start/End: Original strand, 43523573 - 43523730
Alignment:
Q  460 caatggagttattgaaagccattttcaacttattgaatc-attggagaaggg-ttattgaagatgatgtggatgaaagagatgataaaccaattcaacaa 557  Q
    |||||| ||||||||||||||||||||||| |||||| | |||||||||||| ||||| || ||||||||||||||||||||||| ||||| |||||||     
T  43523573 caatggggttattgaaagccattttcaact-attgaaaccattggagaaggggttattaaaaatgatgtggatgaaagagatgatgaaccatttcaacat 43523671  T
Q  558 gttgaaagtctgccaccgtatgccacgcgtcgcgtttctgttggttcatttgggcgcgtg 617  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  43523672 gttgaaagtctg-caccgtatgccacgcgtcgcgtttctgttggttcttttgggcgcgtg 43523730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 450 - 619
Target Start/End: Complemental strand, 44150665 - 44150496
Alignment:
Q  450 agaccacctccaatggagttattgaaagccattttcaacttattgaatc-attggagaaggg-ttattgaagatgatgtggatgaaagagatgataaacc 547  Q
    ||||||||| |||||| ||||||||||| ||||||||||| |||||| | |||||||||||| |||||||| ||||||| ||||||||||||||| ||||    
T  44150665 agaccaccttcaatggggttattgaaagtcattttcaact-attgaaaccattggagaaggggttattgaaaatgatgttgatgaaagagatgatgaacc 44150567  T
Q  548 aattcaacaagttgaaagtctgccaccgtatgccacgcgtcgcgtttctgttggttcatttgggcgcgtgtg 619  Q
    | |||||||  |||||| ||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  44150566 atttcaacatcttgaaaatctgc-accgtatgccacgcgtcgcgtttctgttggttcttttggacgcgtgtg 44150496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 460 - 619
Target Start/End: Complemental strand, 29732453 - 29732295
Alignment:
Q  460 caatggagttattgaaagccattttcaacttattgaatc-attggagaagggttattgaagatgatgtggatgaaagagatgataaaccaattcaacaag 558  Q
    |||||| |||||||||||| | |||||||| |||||| | |||||||||||| ||||||| |||| |||||||||||||||||| ||||| ||||||| |    
T  29732453 caatggggttattgaaagcaaatttcaact-attgaaaccattggagaaggggtattgaaaatgaggtggatgaaagagatgatgaaccatttcaacatg 29732355  T
Q  559 ttgaaagtctgccaccgtatgccacgcgtcgcgtttctgttggttcatttgggcgcgtgtg 619  Q
    ||||||||||||||||||| |||||| |||||||||||||| ||| |||||||||||||||    
T  29732354 ttgaaagtctgccaccgta-gccacgtgtcgcgtttctgttcgttgatttgggcgcgtgtg 29732295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 450 - 564
Target Start/End: Original strand, 13783481 - 13783595
Alignment:
Q  450 agaccacctccaatggagttattgaaagccattttcaacttattgaatcattggagaagggttattgaagatgatgtggatgaaagagatgataaaccaa 549  Q
    |||||||| ||||||| |||||||||||||||||||||| ||| ||  |||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  13783481 agaccacccccaatggggttattgaaagccattttcaacctatcgagccattggagaaggcttattgaagatgatgtggatgaaagagatgatgaaccaa 13783580  T
Q  550 ttcaacaagttgaaa 564  Q
    ||||||| |||||||    
T  13783581 ttcaacatgttgaaa 13783595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 450 - 569
Target Start/End: Original strand, 38204624 - 38204743
Alignment:
Q  450 agaccacctccaatggagttattgaaagccattttcaacttattgaatc-attggagaagggttattgaagatgatgtggatgaaagagatgataaacca 548  Q
    |||||||| ||||||| |||||||||||| | |||||||| |||||| | |||||||||| | ||||||| ||||||||||||||||||||||| |||||    
T  38204624 agaccacccccaatggggttattgaaagcaaatttcaact-attgaaaccattggagaagaggtattgaaaatgatgtggatgaaagagatgatgaacca 38204722  T
Q  549 attcaacaagttgaaagtctg 569  Q
     ||||||| ||||||| ||||    
T  38204723 tttcaacatgttgaaaatctg 38204743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 450 - 618
Target Start/End: Complemental strand, 24349262 - 24349093
Alignment:
Q  450 agaccacctccaatggagttattgaaagccattttcaacttattgaatc-attggagaag-ggttattgaagatgatgtggatgaaagagatgataaacc 547  Q
    |||||| | |||||||  |||||||||||||||||||||| |||||| | |||||||||| |||||||||||||||| ||||||||||||||||| ||||    
T  24349262 agaccatccccaatgggattattgaaagccattttcaact-attgaaaccattggagaagaggttattgaagatgatttggatgaaagagatgatgaacc 24349164  T
Q  548 aattcaacaagttgaaagtctgccaccgtatgccacgcgtcgcgtttctgttggttcatttgggcgcgtgt 618  Q
    | ||||||| ||||||||||||| || |||||||||||| ||||||||||||||||| ||| |||| ||||    
T  24349163 atttcaacatgttgaaagtctgctacggtatgccacgcggcgcgtttctgttggttctttttggcgtgtgt 24349093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 450 - 619
Target Start/End: Complemental strand, 39009287 - 39009119
Alignment:
Q  450 agaccacctccaatggagttattgaaagccattttcaacttattgaatc-attggagaaggg-ttattgaagatgatgtggatgaaagagatgataaacc 547  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||| | |||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  39009287 agaccacc-ccaatggggttattgaaagccattttcaact-attgaaaccattggagaaggggttattgaaaatgatgtggatgaaagagatgatgaacc 39009190  T
Q  548 aattcaacaagttgaaagtctgccaccgtatgccacgcgtcgcgtttctgttggttcatttgggcgcgtgtg 619  Q
    | |||| || ||||||| |||| ||| |||||||||||||||||||| ||||||||| ||| || |||||||    
T  39009189 atttcagcatgttgaaaatctg-cactgtatgccacgcgtcgcgtttttgttggttctttttggtgcgtgtg 39009119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 469 - 601
Target Start/End: Complemental strand, 23090186 - 23090054
Alignment:
Q  469 tattgaaagccattttcaacttattgaatcattggagaaggg-ttattgaagatgatgtggatgaaagagatgataaaccaattcaacaagttgaaagtc 567  Q
    |||||||||||||||||||||  |  || ||||||||||||| |||||||| |||||||||||||||||||| || ||||| ||||||| ||||||| ||    
T  23090186 tattgaaagccattttcaactactgaaaccattggagaaggggttattgaaaatgatgtggatgaaagagataatgaaccatttcaacatgttgaaaatc 23090087  T
Q  568 tgccaccgtatgccacgcgtcgcgtttctgttgg 601  Q
    || |||||||||||| | ||||||||||||||||    
T  23090086 tg-caccgtatgccatgtgtcgcgtttctgttgg 23090054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 450 - 601
Target Start/End: Original strand, 49026711 - 49026863
Alignment:
Q  450 agaccacctccaatggagttattgaaagccattttcaacttattgaatc-attggagaaggg-ttattgaagatgatgtggatgaaagagatgataaacc 547  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||| | ||| |||||||| |||||||| |||| |||||||||||||||||| ||||    
T  49026711 agaccacccccaatggggttattgaaagccattttcaact-attgaaaccattcgagaaggggttattgaaaatgacgtggatgaaagagatgatgaacc 49026809  T
Q  548 aattcaacaagttgaaagtctgccaccgtatgccacgcgtcgcgtttctgttgg 601  Q
    | ||||||| ||||||| |||| ||||| | ||||||||||||||| |||||||    
T  49026810 atttcaacatgttgaaaatctgacaccggaggccacgcgtcgcgttcctgttgg 49026863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 450 - 601
Target Start/End: Complemental strand, 11908704 - 11908553
Alignment:
Q  450 agaccacctccaatggagttattgaaagccattttcaacttattgaatc-attggagaaggg-ttattgaagatgatgtggatgaaagagatgataaacc 547  Q
    ||||||||  |||||| ||||||||||||||||||||||| |||||| | ||| |||||||| |||||||| ||||||||||||||||||||||| ||||    
T  11908704 agaccaccctcaatggggttattgaaagccattttcaact-attgaaaccattagagaaggggttattgaaaatgatgtggatgaaagagatgatgaacc 11908606  T
Q  548 aattcaacaagttgaaagtctgccaccgtatgccacgcgtcgcgtttctgttgg 601  Q
    | ||||||  ||||||| |||| |||| ||||||||| ||||||||||||||||    
T  11908605 atttcaacgtgttgaaaatctg-caccatatgccacgtgtcgcgtttctgttgg 11908553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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