View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14728_high_46 (Length: 239)
Name: NF14728_high_46
Description: NF14728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14728_high_46 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 41547293 - 41547073
Alignment:
| Q |
19 |
catgaatcatccttgtagaaaagaagcttaacccatatgttcatctaccaatggtcatttacaatgtgaagtccatgtttgtttctctttttgatatgcc |
118 |
Q |
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| T |
41547293 |
catgaatcatccttgtagtaaagaagcttaacccatatgttcatctaccaatggtcatttacaatgtgaagtccatgtttgtttctctttttgacatgcc |
41547194 |
T |
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| Q |
119 |
tcgcaaaaacatttgatttaaatttcatatttagtaatcctctaactagattgaacttgtttaattttgatatcattttcacgtttgcatgctccaatta |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41547193 |
tcgcaaaaacatttgatttaaatttcatatttagtaatcctctaactagattgaacttgtttaattttgatatcattttcacgtttgcatgctccaatta |
41547094 |
T |
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| Q |
219 |
tttgtgttatatccattgctc |
239 |
Q |
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||||||||||||||||||||| |
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| T |
41547093 |
tttgtgttatatccattgctc |
41547073 |
T |
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