View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14728_low_30 (Length: 313)
Name: NF14728_low_30
Description: NF14728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14728_low_30 |
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Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 308
Target Start/End: Complemental strand, 35757691 - 35757380
Alignment:
| Q |
1 |
tcagaatgagacgatcccatgagcatattgatagagacattgtataatatatgcagggatcagagttggtcatcccacttattccaccttaaaaatgtgg |
100 |
Q |
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| T |
35757691 |
tcagaatgagacgatcccgtgagcatattgatagagacattgcataatatatgcagggatcagagttggtcatcccacttattccaccttaaaaatgtgg |
35757592 |
T |
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| Q |
101 |
atttctaaccactc-aactacttgataaaaaagaaaagaaccaatataannnnnnnnn-ctacaataaatgaaccaatatcgtcttaattgcgtttaatc |
198 |
Q |
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| T |
35757591 |
atttctaacccccccaactacttggtaaaaaagaaaagaaccaatataattttttttttctagaataaatgaaccaatatcgtcttaattgcgtttaatc |
35757492 |
T |
|
| Q |
199 |
aaattggattttatcaagaaagcaatctaaatcaaat--aagctcatgatataagataatgagtctttgtctcaaactaatccaaactaaaacataaaca |
296 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35757491 |
aaattggattttatcaagaaagcaatctaaatcaaattgaagctcatgttataagataatgagtctttgtctcaaactaatccaaactaaaacataaaca |
35757392 |
T |
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| Q |
297 |
ctgatgatgtcc |
308 |
Q |
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|||||| ||||| |
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| T |
35757391 |
ctgatgttgtcc |
35757380 |
T |
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