View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14728_low_33 (Length: 296)
Name: NF14728_low_33
Description: NF14728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14728_low_33 |
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Alignment Details
Target: chr6 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 13 - 280
Target Start/End: Original strand, 24881185 - 24881460
Alignment:
| Q |
13 |
attattctattttgtgtttgaagatttttcattccttgttagacttaactaccgactcatatgataaggattttgataactttaatccaaaaatagtatg |
112 |
Q |
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| T |
24881185 |
attattctattttgtgtttgaagatttttcattccttgttagacttaactaccgactcatatgataaggactttgataactttaatccaaaaatagtatg |
24881284 |
T |
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| Q |
113 |
attcatgttaggaggcaggagctacgactatggagtattattgaatatacattgattttaccaaaaccactaactataagacatcaactgaaaaccttca |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24881285 |
attcatgttaggaggcaggagctacgactatggagtattttttaatatacattgattttaccaaaaccactaactataagacatcaactgaaaaccttct |
24881384 |
T |
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| Q |
213 |
taaaga--------aaaaagatatcaactaataacaatatttggctggttggttcttgttccatcattgtttattg |
280 |
Q |
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| T |
24881385 |
taaagaatctctatatatagacatcaactaataacaatatttggctgcttggttcatgttccatcattgtttattg |
24881460 |
T |
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