View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1472_high_19 (Length: 240)
Name: NF1472_high_19
Description: NF1472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1472_high_19 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 6 - 225
Target Start/End: Complemental strand, 23118223 - 23118004
Alignment:
| Q |
6 |
aggaatatactaaaatatccgaaaagcagcggacttacctgtccatgcagaccccagccaaaagtaagaagagccccagtatctacaaaagcaatttata |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23118223 |
aggaatatactaaaatatccgaaaagcagcggacttacctgtccatgcagaccccagccaaaagtaagaagagccccagtatctacaaaagcaatttata |
23118124 |
T |
|
| Q |
106 |
aacaatgttagaatttcttttatcgagtgcttaattgaacttgcatatctattgagtgcttaattgaacttggatatctttgaacaacattgagaataga |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23118123 |
aacaatgttagaatttcttttatcgagtgcttaattgaacttgcatatctattgagtgcttaattgaacttggatatctttgaacaacattgagaataga |
23118024 |
T |
|
| Q |
206 |
catttagtaactgatataca |
225 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
23118023 |
catttagtaactgatataca |
23118004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University