View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14730_high_24 (Length: 206)
Name: NF14730_high_24
Description: NF14730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14730_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 154; Significance: 7e-82; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 25 - 190
Target Start/End: Complemental strand, 49921552 - 49921388
Alignment:
| Q |
25 |
tagtgaaaacaataaggaaagtttactccaaataagaggagattttatttgaatagattttggtttacatattacaaccaataaggaaagttcacaattt |
124 |
Q |
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| T |
49921552 |
tagtgaaaacaataaggaaagtttactccaaataagaggagattttgtttgaatagattttggtttacatattacaaccaataaggaaagttcacaattt |
49921453 |
T |
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| Q |
125 |
ttgaatctatacatagttttcttttcatgctaggtctttgcaccgtgcgaccaccatagatgatgc |
190 |
Q |
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| T |
49921452 |
ttgaatctatacatag-tttcttttcatgctaggtctttgcaccgtgcgaccaccatagatgatgc |
49921388 |
T |
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