View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14730_high_5 (Length: 437)
Name: NF14730_high_5
Description: NF14730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14730_high_5 |
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Alignment Details
Target: chr5 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 47 - 372
Target Start/End: Complemental strand, 41117374 - 41117049
Alignment:
| Q |
47 |
ctgtgaagaatccatttccattgaaatcatcgtaagctgagctagaaggaatagatcatgataagcccaaagtgcaatgaacttgaagtagaaatcaaga |
146 |
Q |
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| T |
41117374 |
ctgtgaagaatccatttccattgaaatcatcgtaagctgagctagaaggaatagatcatgataagcccaaagtgcaatgaacttgaagtagaaatcaaga |
41117275 |
T |
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| Q |
147 |
acttaatcaaggtatggctcaaagtcctagcttcactatcttactgttatttcatatcctcaaacattccaaaaggcatattaaggtttctgtccttgtc |
246 |
Q |
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| T |
41117274 |
acttaatcaaggtatggctcaaagtcctagcttcactatcttactgttatttcatatcctcaaacattccaaaaggcatattaaggtttctgtccttgtc |
41117175 |
T |
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| Q |
247 |
tccaattttttacctcttcaccatcctaccatttcaactctctttagttctcccaataggtatcacttccttcttcattacttggctcacaaacttcaaa |
346 |
Q |
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| T |
41117174 |
tccaattttttacctcttcaccatcctaccatttcaactctctttagttctcccaataggtatcacttccttcttcattacttggctcacaaacttcaaa |
41117075 |
T |
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| Q |
347 |
cttctccttttcacctttgatttggg |
372 |
Q |
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|||||||||||||||||||||||||| |
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| T |
41117074 |
cttctccttttcacctttgatttggg |
41117049 |
T |
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