View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14731_high_3 (Length: 228)

Name: NF14731_high_3
Description: NF14731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14731_high_3
NF14731_high_3
[»] chr4 (1 HSPs)
chr4 (1-228)||(44262384-44262610)
[»] chr6 (45 HSPs)
chr6 (1-228)||(24942182-24942408)
chr6 (1-226)||(24934651-24934875)
chr6 (1-226)||(24738986-24739210)
chr6 (1-228)||(30135107-30135334)
chr6 (1-226)||(21160416-21160640)
chr6 (1-228)||(29949688-29949914)
chr6 (29-228)||(29953512-29953711)
chr6 (2-228)||(30149509-30149734)
chr6 (12-228)||(30053409-30053624)
chr6 (2-228)||(24898059-24898284)
chr6 (28-174)||(29366238-29366384)
chr6 (13-174)||(29348401-29348561)
chr6 (9-176)||(15726988-15727154)
chr6 (29-161)||(29898126-29898254)
chr6 (44-213)||(29887294-29887463)
chr6 (11-228)||(30577569-30577785)
chr6 (62-161)||(30118592-30118691)
chr6 (59-213)||(28926395-28926549)
chr6 (62-161)||(29905688-29905787)
chr6 (44-174)||(29835251-29835381)
chr6 (44-174)||(29866685-29866815)
chr6 (44-174)||(29894589-29894719)
chr6 (73-177)||(15714854-15714958)
chr6 (61-213)||(24730852-24731004)
chr6 (50-174)||(29073799-29073923)
chr6 (50-174)||(29078563-29078687)
chr6 (50-174)||(29106372-29106496)
chr6 (46-174)||(29929309-29929437)
chr6 (59-174)||(29357827-29357942)
chr6 (19-209)||(16701964-16702153)
chr6 (50-212)||(30126894-30127056)
chr6 (62-174)||(24890097-24890209)
chr6 (50-174)||(29211232-29211356)
chr6 (109-213)||(30061893-30061997)
chr6 (50-161)||(24263591-24263702)
chr6 (119-226)||(30029332-30029439)
chr6 (107-174)||(30060058-30060125)
chr6 (119-226)||(30154595-30154702)
chr6 (14-176)||(29889764-29889925)
chr6 (71-174)||(29116297-29116400)
chr6 (119-161)||(24271855-24271897)
chr6 (53-171)||(29882474-29882592)
chr6 (53-171)||(29909630-29909748)
chr6 (119-228)||(30029120-30029229)
chr6 (104-174)||(29099379-29099449)
[»] chr3 (4 HSPs)
chr3 (1-228)||(24226802-24227028)
chr3 (119-174)||(24219143-24219198)
chr3 (37-176)||(16351084-16351223)
chr3 (15-177)||(33997973-33998134)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-226)||(43660-43884)
[»] chr8 (1 HSPs)
chr8 (2-162)||(9782587-9782746)
[»] scaffold0572 (1 HSPs)
scaffold0572 (9-226)||(3217-3433)
[»] chr1 (1 HSPs)
chr1 (32-213)||(17251310-17251491)
[»] scaffold0019 (1 HSPs)
scaffold0019 (37-176)||(125949-126088)
[»] chr7 (1 HSPs)
chr7 (29-228)||(8651248-8651446)
[»] scaffold0429 (1 HSPs)
scaffold0429 (9-175)||(6231-6396)
[»] scaffold0573 (1 HSPs)
scaffold0573 (59-213)||(4134-4288)
[»] scaffold0014 (3 HSPs)
scaffold0014 (9-209)||(121279-121478)
scaffold0014 (37-174)||(104564-104701)
scaffold0014 (37-156)||(137428-137547)
[»] scaffold0652 (1 HSPs)
scaffold0652 (9-209)||(1094-1293)
[»] scaffold0308 (1 HSPs)
scaffold0308 (9-213)||(8992-9195)
[»] scaffold0177 (1 HSPs)
scaffold0177 (37-209)||(27354-27526)
[»] scaffold0237 (1 HSPs)
scaffold0237 (107-174)||(22379-22446)
[»] scaffold0654 (1 HSPs)
scaffold0654 (119-209)||(1128-1218)
[»] scaffold0086 (1 HSPs)
scaffold0086 (122-209)||(31225-31312)
[»] scaffold0051 (1 HSPs)
scaffold0051 (72-176)||(47764-47868)


Alignment Details
Target: chr4 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 44262384 - 44262610
Alignment:
Q  1 tgataaaccacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttg 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44262384 tgataaaccacttgtgcatccttaagtc-ttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttg 44262482  T
Q  101 atcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44262483 atcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgataacatcagcaggttggcctatat 44262582  T
Q  201 tatgcatctcatctataagatcccaaac 228  Q
    ||||||||||||||||||||||||||||    
T  44262583 tatgcatctcatctataagatcccaaac 44262610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 180; Significance: 2e-97; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 24942408 - 24942182
Alignment:
Q  1 tgataaaccacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttg 100  Q
    ||||||||| ||||||||| ||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24942408 tgataaaccgcttgtgcatgcttaaatc-ttccatttttgcatagtccatcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttg 24942310  T
Q  101 atcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatat 200  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||| |||    
T  24942309 atcttcattaataatgtaattgccttgtcaacctgatggtttttgaacaaagcatccaataaggaattgtacgtgatcacatcagcaggttggcctctat 24942210  T
Q  201 tatgcatctcatctataagatcccaaac 228  Q
    ||||||||||||||||||||||||||||    
T  24942209 tatgcatctcatctataagatcccaaac 24942182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 24934875 - 24934651
Alignment:
Q  1 tgataaaccacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttg 100  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24934875 tgataaaccgcttgtgcatccttaagtc-ttccatttttgcatagtccatcaacaagtatagtgtaagtataaatatttggctgaattccttggtctttg 24934777  T
Q  101 atcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatat 200  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||| |||    
T  24934776 atcttcgttattaatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaactgtaagtgatcacatcggcaggttggcctctat 24934677  T
Q  201 tatgcatctcatctataagatcccaa 226  Q
    |||||||||||| || ||||||||||    
T  24934676 tatgcatctcatttacaagatcccaa 24934651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 24738986 - 24739210
Alignment:
Q  1 tgataaaccacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttg 100  Q
    ||||||||| |||| || ||||| |||| |||||||||||||||  || ||||||||||| ||||| ||||| ||||  |||||||||||||||||||||    
T  24738986 tgataaacctcttgcgcgtccttgagtc-ttccatttttgcataaaccatcaacaagtattgtgtatgtatatatatccggctgaattccttggtctttg 24739084  T
Q  101 atcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatat 200  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  24739085 atcttcgtaagtaatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagcaggttggcctctat 24739184  T
Q  201 tatgcatctcatctataagatcccaa 226  Q
    |||||||||||| || ||||||||||    
T  24739185 tatgcatctcatttacaagatcccaa 24739210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 30135334 - 30135107
Alignment:
Q  1 tgataaaccacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttg 100  Q
    ||||||||| ||| |||||||||||||  ||||||||||||||| ||| ||||||||||  ||||| ||||||| |||||||||||| ||||||||||||    
T  30135334 tgataaaccgcttttgcatccttaagtt-ttccatttttgcatattccatcaacaagtaatgtgtatgtatacaaatttggctgaataccttggtctttg 30135236  T
Q  101 atcttcgttaataatgtgattgccttgtc-aacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctata 199  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| ||| |     
T  30135235 atcttcgttaataatgtgattgccttgtcaaacctgatggtttttgcacaaagcatccaataaagaattgtaagtgatcacattagcaggttgacctctt 30135136  T
Q  200 ttatgcatctcatctataagatcccaaac 228  Q
    | |||||||||||||||||||||||||||    
T  30135135 tcatgcatctcatctataagatcccaaac 30135107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 21160416 - 21160640
Alignment:
Q  1 tgataaaccacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttg 100  Q
    ||||| ||| |||| || |||||||||| |||||||||||||||  || ||||||||||| ||||| ||||| ||||  ||||||||||||||||||||     
T  21160416 tgatagacctcttgcgcgtccttaagtc-ttccatttttgcataaaccatcaacaagtattgtgtatgtatatatatacggctgaattccttggtctttt 21160514  T
Q  101 atcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatat 200  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  21160515 atcttcgtaaataatgtgattgccatgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagcaggttggcctctat 21160614  T
Q  201 tatgcatctcatctataagatcccaa 226  Q
    |||||||||||| || ||||||||||    
T  21160615 tatgcatctcatttacaagatcccaa 21160640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 29949688 - 29949914
Alignment:
Q  1 tgataaaccacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttg 100  Q
    ||||||| | |||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  29949688 tgataaatctcttgtgcatcctcaagtc-ttccatttttgcatagtccatcaacaagtatagtgtatgtatacatatttggctgaattccttggtctttt 29949786  T
Q  101 atcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatat 200  Q
    |||||  |||||||||  || |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||| |||| |||||||||||||||||    
T  29949787 atcttttttaataatgcaatcgccttgtcaacctgatggtttttgcataaagcatctaataaagaattgtaagtgatcacattagcaggttggcctatat 29949886  T
Q  201 tatgcatctcatctataagatcccaaac 228  Q
     |||||||||  | | ||||||||||||    
T  29949887 catgcatctcgacaagaagatcccaaac 29949914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 29 - 228
Target Start/End: Original strand, 29953512 - 29953711
Alignment:
Q  29 cttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgt 128  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||| |||||||||  || |||||||    
T  29953512 cttccatttttgcatagcccatcaacaagtatagtgtatgtatacatatttggctgaatcccttggtctttcatcttctttaataatgcaatcgccttgt 29953611  T
Q  129 caacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatctcatctataagatcccaaac 228  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||| | | ||||| | | |||||||||||||||||||||||||||||||    
T  29953612 caacctgatggtttttgcacaaagcatccaataaagaattgtaagtgatcacattaaccggttgacatctattatgcatctcatctataagatcccaaac 29953711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 2 - 228
Target Start/End: Complemental strand, 30149734 - 30149509
Alignment:
Q  2 gataaaccacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttga 101  Q
    |||||||  |||||||||||| ||||| |||| ||||||||||||||  ||| |||||||||||| | ||||||| ||||||||||||| ||||||||||    
T  30149734 gataaacttcttgtgcatcctcaagtc-ttccgtttttgcatagtccaacaaaaagtatagtgtatgaatacatacttggctgaattccctggtctttga 30149636  T
Q  102 tcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatatt 201  Q
    ||||  |||||||||  |||||| |||||||||||||||||||||||||  |||| ||||| |||||||||||||| |  || |  ||||| ||| |||     
T  30149635 tcttttttaataatgcaattgccctgtcaacctgatggtttttgcacaatccatcaaataaagaattgtaagtgattatgtcggttggttgacctctatc 30149536  T
Q  202 atgcatctcatctataagatcccaaac 228  Q
    ||||||||||||||||| |||||||||    
T  30149535 atgcatctcatctataaaatcccaaac 30149509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 30053624 - 30053409
Alignment:
Q  12 ttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaa 111  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||| | ||||| ||| |||||| |||||||||||||| |||||| |||||||||||    
T  30053624 ttgtgcatccttaagtc-ttccatttttgcatagtccatcaacaagtgttgtgtatgtaaacatatctggctgaattccttcgtctttcatcttcgttaa 30053526  T
Q  112 taatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatctca 211  Q
     || |  ||||||||||||||||||||||||||||||||  |||  ||||| |||||||||||||| | || ||| ||||| ||   |||||  || |||    
T  30053525 caacgcaattgccttgtcaacctgatggtttttgcacaatccatataataaagaattgtaagtgattatattagctggttgaccacaattataaatatca 30053426  T
Q  212 tctataagatcccaaac 228  Q
    |||||||||||||||||    
T  30053425 tctataagatcccaaac 30053409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 228
Target Start/End: Complemental strand, 24898284 - 24898059
Alignment:
Q  2 gataaaccacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttga 101  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||| |||||||| || ||||| ||  |||||| ||| | ||||||  |||||||||    
T  24898284 gataaacctcttgtgcatccttaagtc-ttccatttttgcatagtccatcaacaagcattgtgtatgtgaacatatctggttcaattccccggtctttga 24898186  T
Q  102 tcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatatt 201  Q
    ||||| | ||||| |  |||||||||||||| |||||||||||  |||| ||||||||||| ||  ||||| |||| |  |||||  |||| ||| |||     
T  24898185 tcttcttcaataacgcaattgccttgtcaacttgatggtttttaaacaatgcatccaataacgaggtgtaaatgattatgtcagcttgttgacctctatc 24898086  T
Q  202 atgcatctcatctataagatcccaaac 228  Q
    |||||| ||||||||||||||||||||    
T  24898085 atgcatatcatctataagatcccaaac 24898059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 28 - 174
Target Start/End: Original strand, 29366238 - 29366384
Alignment:
Q  28 ccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttg 127  Q
    ||||||||||||||||||||| ||||| | | | ||||| ||| | |||| ||| ||||||||||  ||||| ||||||||||| || |  |||||||||    
T  29366238 ccttccatttttgcatagtccatcaactaatgttgtgtatgtacaaatatctggttgaattccttcatctttcatcttcgttaacaacgcaattgccttg 29366337  T
Q  128 tcaacctgatggtttttgcacaaagcatccaataaggaattgtaagt 174  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||    
T  29366338 tcaacctgatggtttttgcataaagcatccaatatagaattgtaagt 29366384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 174
Target Start/End: Original strand, 29348401 - 29348561
Alignment:
Q  13 tgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaat 112  Q
    ||||||||||| |||| |||||  ||| || | ||| |||| ||| |||||||| || ||||||| ||| ||||||||||  ||||| |||||||||||     
T  29348401 tgtgcatcctttagtc-ttccacctttacacaatccatcaataagaatagtgtatgtgtacatatctggttgaattccttcatctttcatcttcgttaac 29348499  T
Q  113 aatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagt 174  Q
    || |  ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  29348500 aacgcaattgccttgtcaacctgatggtttttgcataaagcatccaatatagaattgtaagt 29348561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 176
Target Start/End: Original strand, 15726988 - 15727154
Alignment:
Q  9 cacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgt 108  Q
    |||||||||||||||||||| |||| | |||||||||||| || | ||||||| | || |||||||||| ||  ||||| || ||||||||||| ||| |    
T  15726988 cacttgtgcatccttaagtc-ttccttgtttgcatagtccatcgataagtatactatatgtatacatatctgattgaatgccctggtctttgattttctt 15727086  T
Q  109 taataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtga 176  Q
     | ||||   |||||||||||||| |||||||||||||| |||||||| | ||| |||||||||||||    
T  15727087 gactaatacaattgccttgtcaacgtgatggtttttgcataaagcatctattaacgaattgtaagtga 15727154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 29898254 - 29898126
Alignment:
Q  29 cttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgt 128  Q
    ||||||||||| |||||||| ||||||||| | ||||| ||| | |||| |||||||||||    |||||| ||||| ||||| || |||||||||||||    
T  29898254 cttccatttttccatagtccatcaacaagtgttgtgtatgtacaaatatctggctgaattc----gtctttaatctttgttaacaacgtgattgccttgt 29898159  T
Q  129 caacctgatggtttttgcacaaagcatccaata 161  Q
    ||||||||||||||||||| ||||||| |||||    
T  29898158 caacctgatggtttttgcataaagcattcaata 29898126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 213
Target Start/End: Complemental strand, 29887463 - 29887294
Alignment:
Q  44 agtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttt 143  Q
    ||||| |||| ||| |||||||| || |||||||||||  |||| || |||||||| |  || |||||||| |  |||||||||||||||||||||||||    
T  29887463 agtccatcaataagaatagtgtatgtgtacatatttggtcgaataccctggtctttcaaatttgttaataacgcaattgccttgtcaacctgatggtttt 29887364  T
Q  144 tgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatctcatc 213  Q
    |||| |||||||| ||||| ||| ||||||| || | |||||  ||||| ||| ||| ||||||||||||    
T  29887363 tgcataaagcatctaataaagaactgtaagtaattatatcaggtggttgacctctatcatgcatctcatc 29887294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 228
Target Start/End: Original strand, 30577569 - 30577785
Alignment:
Q  11 cttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgtta 110  Q
    |||||||||||||||||| ||||||||||||| ||||| |||||||||||| |||| |||  ||||||||||| || ||||| |||||||||||| || |    
T  30577569 cttgtgcatccttaagtc-ttccatttttgcacagtccatcaacaagtatattgtatgtaaccatatttggctcaaatcctttgtctttgatctttgtaa 30577667  T
Q  111 ataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatctc 210  Q
    ||| | | |||||| ||||||  |||    ||||||||||| |||  ||||| ||| |||| ||||| |||| ||| |   | ||| ||  | |||||||    
T  30577668 atattctaattgccgtgtcaaaatgaccacttttgcacaaaacatttaataaagaactgtatgtgatcacattagctgaccgacctgtagcacgcatctc 30577767  T
Q  211 atctataagatcccaaac 228  Q
    ||||||||||||||||||    
T  30577768 atctataagatcccaaac 30577785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 62 - 161
Target Start/End: Original strand, 30118592 - 30118691
Alignment:
Q  62 gtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaata 161  Q
    ||||| || ||||||||||| ||||||||  ||||||| |  || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  30118592 gtgtatgtgtacatatttggttgaattcccaggtctttcaattttgttaataatgtgattgccttgtcaacctgatagtttttgcataaagcatccaata 30118691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 59 - 213
Target Start/End: Original strand, 28926395 - 28926549
Alignment:
Q  59 atagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatcca 158  Q
    |||||||| || ||||||||||| ||||  || |||||||| |  || ||||||||||  |||||||||||||| |||||||||||||| ||||||||||    
T  28926395 atagtgtatgtgtacatatttggttgaagaccctggtctttcaattttgttaataatgcaattgccttgtcaacatgatggtttttgcataaagcatcca 28926494  T
Q  159 ataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatctcatc 213  Q
    |||  ||| ||||||| || | |||||  ||||| ||| ||| ||||||||||||    
T  28926495 atagagaactgtaagtaattatatcaggtggttgacctctatcatgcatctcatc 28926549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 161
Target Start/End: Complemental strand, 29905787 - 29905688
Alignment:
Q  62 gtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaata 161  Q
    ||||| || ||||||||||| ||||| ||  ||||||| |  || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  29905787 gtgtatgtgtacatatttggttgaatacccaggtctttcaattttgttaataatgtgattgccttgtcaacctgatagtttttgcataaagcatccaata 29905688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 174
Target Start/End: Complemental strand, 29835381 - 29835251
Alignment:
Q  44 agtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttt 143  Q
    ||||| |||| ||| |||||||| || |||||||||||  |||| || |||||||| |  || |||||||| |  |||||||||||||||||||||||||    
T  29835381 agtccatcaataagaatagtgtatgtgtacatatttggtcgaataccctggtctttcaattttgttaataacgcaattgccttgtcaacctgatggtttt 29835282  T
Q  144 tgcacaaagcatccaataaggaattgtaagt 174  Q
    |||| |||||||||||||  ||| |||||||    
T  29835281 tgcataaagcatccaatatagaactgtaagt 29835251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 174
Target Start/End: Complemental strand, 29866815 - 29866685
Alignment:
Q  44 agtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttt 143  Q
    ||||| |||| ||| |||||||| || |||||||||||  |||| || |||||||| |  || |||||||| |  |||||||||||||||||||||||||    
T  29866815 agtccatcaataagaatagtgtatgtgtacatatttggtcgaataccctggtctttcaaatttgttaataacgcaattgccttgtcaacctgatggtttt 29866716  T
Q  144 tgcacaaagcatccaataaggaattgtaagt 174  Q
    |||| |||||||||||||  ||| |||||||    
T  29866715 tgcataaagcatccaatatagaactgtaagt 29866685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 174
Target Start/End: Complemental strand, 29894719 - 29894589
Alignment:
Q  44 agtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttt 143  Q
    ||||| |||| ||| |||||||| || |||||||||||  |||| || |||||||| |  || |||||||| |  |||||||||||||||||||||||||    
T  29894719 agtccatcaataagaatagtgtatgtgtacatatttggtcgaataccctggtctttcaattttgttaataacgcaattgccttgtcaacctgatggtttt 29894620  T
Q  144 tgcacaaagcatccaataaggaattgtaagt 174  Q
    |||| |||||||||||||  ||| |||||||    
T  29894619 tgcataaagcatccaatatagaactgtaagt 29894589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 177
Target Start/End: Original strand, 15714854 - 15714958
Alignment:
Q  73 catatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaa 172  Q
    ||||||||| | |||||||||||||||||||||| | |  || |  |||||||||||||| ||||| |||||||| ||||||| |||||||||||||||     
T  15714854 catatttggttcaattccttggtctttgatcttcttgaccaaagcaattgccttgtcaacgtgatgatttttgcataaagcatgcaataaggaattgtat 15714953  T
Q  173 gtgat 177  Q
    |||||    
T  15714954 gtgat 15714958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 24731004 - 24730852
Alignment:
Q  61 agtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaat 160  Q
    |||||| || ||||||| |||  |||| || |||||||| |  || ||||||||||  |||||||||||||| |||||||||||||| ||||||||||||    
T  24731004 agtgtatgtgtacatatctggtcgaataccctggtctttcaaatttgttaataatgcaattgccttgtcaacatgatggtttttgcataaagcatccaat 24730905  T
Q  161 aaggaattgtaagtgatgacatcagcaggttggcctatattatgcatctcatc 213  Q
    |  ||||||||||| || | || ||  ||||| ||| ||| ||||||||||||    
T  24730904 atagaattgtaagttattatattaggtggttgacctctatcatgcatctcatc 24730852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 29073923 - 29073799
Alignment:
Q  50 tcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcaca 149  Q
    |||| ||| |||||||| || | |||| ||||  |||| ||||||||||| |  || ||||||||||  ||||||||||||||||||||||||||||| |    
T  29073923 tcaataagaatagtgtatgtgtgcatagttggtcgaataccttggtctttcaattttgttaataatgcaattgccttgtcaacctgatggtttttgcata 29073824  T
Q  150 aagcatccaataaggaattgtaagt 174  Q
    ||||||||||||  ||| |||||||    
T  29073823 aagcatccaatatagaactgtaagt 29073799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 29078687 - 29078563
Alignment:
Q  50 tcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcaca 149  Q
    |||| ||| |||||||| || | |||| ||||  |||| ||||||||||| |  || ||||||||||  ||||||||||||||||||||||||||||| |    
T  29078687 tcaataagaatagtgtatgtgtgcatagttggtcgaataccttggtctttcaattttgttaataatgcaattgccttgtcaacctgatggtttttgcata 29078588  T
Q  150 aagcatccaataaggaattgtaagt 174  Q
    ||||||||||||  ||| |||||||    
T  29078587 aagcatccaatatagaactgtaagt 29078563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 29106496 - 29106372
Alignment:
Q  50 tcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcaca 149  Q
    |||| ||| |||||||| || | |||| ||||  |||| ||||||||||| |  || ||||||||||  ||||||||||||||||||||||||||||| |    
T  29106496 tcaataagaatagtgtatgtgtgcatagttggtcgaataccttggtctttcaattttgttaataatgcaattgccttgtcaacctgatggtttttgcata 29106397  T
Q  150 aagcatccaataaggaattgtaagt 174  Q
    ||||||||||||  ||| |||||||    
T  29106396 aagcatccaatatagaactgtaagt 29106372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 174
Target Start/End: Complemental strand, 29929437 - 29929309
Alignment:
Q  46 tccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttg 145  Q
    |||||||| ||| |||||||| || |||| | |||| ||||| || ||||||||||  |||||||| ||||  ||||| ||||||||||||||| |||||    
T  29929437 tccgtcaataagaatagtgtatgtgtacacacttggttgaataccctggtctttgaatttcgttaacaatgcaattgctttgtcaacctgatgggttttg 29929338  T
Q  146 cacaaagcatccaataaggaattgtaagt 174  Q
    || |||||||| ||||  |||||||||||    
T  29929337 cataaagcatctaatatagaattgtaagt 29929309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 174
Target Start/End: Original strand, 29357827 - 29357942
Alignment:
Q  59 atagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatcca 158  Q
    |||||||| || ||||||||||| ||||| || |||| ||| ||||  |||||||| |  ||||| ||||||||||||||||||||||| ||||||||||    
T  29357827 atagtgtatgtgtacatatttggttgaataccctggtttttcatctgtgttaataacgcaattgcattgtcaacctgatggtttttgcataaagcatcca 29357926  T
Q  159 ataaggaattgtaagt 174  Q
    |||  ||| |||||||    
T  29357927 atatagaactgtaagt 29357942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 16701964 - 16702153
Alignment:
Q  19 tccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtg 118  Q
    |||||||||| |||| | |||||||||||| ||||||||| || | || || | ||||| ||| ||||| ||||||||||| |  ||  | |  ||||      
T  16701964 tccttaagtc-ttccttgtttgcatagtccatcaacaagtgtattatatgtgtgcatatctggttgaatgccttggtctttaaaattgttgaccaatgca 16702062  T
Q  119 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatct 209  Q
    |||||||||||||| ||||||||||| || |||||||  |||||||||||||||||||| ||||  | |||||||||| ||| | ||||||    
T  16702063 attgccttgtcaacatgatggtttttacataaagcatgtaataaggaattgtaagtgattacattgggaggttggcctctatcacgcatct 16702153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 212
Target Start/End: Original strand, 30126894 - 30127056
Alignment:
Q  50 tcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcaca 149  Q
    |||| ||| |||||||| || |||| | |||| ||||| || |||| ||| |  |||||||| ||||  ||||| ||||||||||||||||||||||| |    
T  30126894 tcaataagaatagtgtatgtgtacacacttggttgaataccctggtttttaaatttcgttaacaatgcaattgctttgtcaacctgatggtttttgcata 30126993  T
Q  150 aagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatctcat 212  Q
    ||||||||||||  ||||||||| | || | |||||  ||||| ||| ||| |||||||||||    
T  30126994 aagcatccaatatagaattgtaaataattatatcaggtggttgacctctatcatgcatctcat 30127056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 174
Target Start/End: Original strand, 24890097 - 24890209
Alignment:
Q  62 gtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaata 161  Q
    ||||| || ||||||| |||  |||| || |||||||| |  || ||||||||||  |||||||||||||| |||||||||||||| |||||||||||||    
T  24890097 gtgtatgtgtacatatctggtcgaataccctggtctttcaaatttgttaataatgcaattgccttgtcaacatgatggtttttgcataaagcatccaata 24890196  T
Q  162 aggaattgtaagt 174  Q
      ||| |||||||    
T  24890197 tagaactgtaagt 24890209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 29211232 - 29211356
Alignment:
Q  50 tcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcaca 149  Q
    |||| ||| |||||||| || | |||||||||  |||| ||||||||||| |  || ||||||||||  | ||||||||||||| ||||| ||||||| |    
T  29211232 tcaataagaatagtgtatgtgtgcatatttggtcgaataccttggtctttcaattttgttaataatgcaactgccttgtcaacccgatgggttttgcata 29211331  T
Q  150 aagcatccaataaggaattgtaagt 174  Q
    ||||||||||||  ||| |||||||    
T  29211332 aagcatccaatatagaactgtaagt 29211356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 213
Target Start/End: Original strand, 30061893 - 30061997
Alignment:
Q  109 taataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatc 208  Q
    |||||||||||||||||||||||  ||||||  |||||| |||||||||||||  ||||||||||| || | || ||  ||||| ||| ||| |||||||    
T  30061893 taataatgtgattgccttgtcaagatgatggcgtttgcataaagcatccaatatagaattgtaagtaattatattaggtggttgacctctatcatgcatc 30061992  T
Q  209 tcatc 213  Q
    |||||    
T  30061993 tcatc 30061997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 161
Target Start/End: Original strand, 24263591 - 24263702
Alignment:
Q  50 tcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcaca 149  Q
    |||| ||| |||||||| || |||||||||||  |||| || |||||||| |  ||  |||||||||  ||||||||||||||| ||||||||||||| |    
T  24263591 tcaataagaatagtgtatgtgtacatatttggtcgaataccctggtctttcaattttattaataatgcaattgccttgtcaaccagatggtttttgcata 24263690  T
Q  150 aagcatccaata 161  Q
    | ||||||||||    
T  24263691 aggcatccaata 24263702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 30029439 - 30029332
Alignment:
Q  119 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatctcatctataa 218  Q
    |||||||||||||  | |||||||||||||||| | || | ||||||| |||| ||||  |||| ||| ||||||||| |||  ||||||||||||||||    
T  30029439 attgccttgtcaagattatggtttttgcacaaaccgtctattaaggaagtgtatgtgaccacattagctggttggcctctatcgtgcatctcatctataa 30029340  T
Q  219 gatcccaa 226  Q
    ||| ||||    
T  30029339 gataccaa 30029332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 30060058 - 30060125
Alignment:
Q  107 gttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagt 174  Q
    ||||||||||  ||||||||||||||||||||||||||||| |||||||  ||||  |||||||||||    
T  30060058 gttaataatgcaattgccttgtcaacctgatggtttttgcataaagcatttaatatagaattgtaagt 30060125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 30154702 - 30154595
Alignment:
Q  119 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatctcatctataa 218  Q
    |||||||||||||  | |||||||||||||||| | || | ||||||| |||| ||||  |||| ||| ||||||||| |||  ||||||||||||||||    
T  30154702 attgccttgtcaagattatggtttttgcacaaaccgtctattaaggaagtgtatgtgaccacattagctggttggcctctatcgtgcatctcatctataa 30154603  T
Q  219 gatcccaa 226  Q
    ||| ||||    
T  30154602 gataccaa 30154595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 29889925 - 29889764
Alignment:
Q  14 gtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaata 113  Q
    |||||||||| |||| |||||  |||||| | ||| |||| ||| |||||||| || |||| |||||| ||||| |  |||||||| |  |||||| | |    
T  29889925 gtgcatcctttagtc-ttccacctttgcacaatccatcaataagaatagtgtatgtttacacatttggttgaatactctggtctttaaatttcgttgaca 29889827  T
Q  114 atgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtga 176  Q
    |||  ||||  ||||||||||||||| ||||||| |||||||| ||||  |||||||||||||    
T  29889826 atgcaattgttttgtcaacctgatgggttttgcataaagcatctaatatagaattgtaagtga 29889764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 29116400 - 29116297
Alignment:
Q  71 tacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgt 170  Q
    ||||||||||| ||||| || | |||||| |  |||||||| ||||  ||||| |||||||| |||||| ||||||| |||||||| ||||  |||||||    
T  29116400 tacatatttggttgaatacccttgtctttcaatttcgttaacaatgcaattgctttgtcaacttgatggattttgcataaagcatctaatatagaattgt 29116301  T
Q  171 aagt 174  Q
    ||||    
T  29116300 aagt 29116297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 24271855 - 24271897
Alignment:
Q  119 attgccttgtcaacctgatggtttttgcacaaagcatccaata 161  Q
    ||||||||||||||||||||||||||||| ||| |||||||||    
T  24271855 attgccttgtcaacctgatggtttttgcataaatcatccaata 24271897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 171
Target Start/End: Complemental strand, 29882592 - 29882474
Alignment:
Q  53 acaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaag 152  Q
    ||||| |||||||| || | ||||| |||  |||| |||||| |||| |  || ||||||||||  ||||| |||||||| ||||| |||||||| ||||    
T  29882592 acaagaatagtgtatgtgttcatatctggtcgaataccttggcctttcaattttgttaataatgcaattgctttgtcaacatgatgttttttgcataaag 29882493  T
Q  153 catccaataaggaattgta 171  Q
    |||||||||  ||||||||    
T  29882492 catccaatatagaattgta 29882474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 171
Target Start/End: Complemental strand, 29909748 - 29909630
Alignment:
Q  53 acaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaag 152  Q
    ||||| |||||||| || | ||||| |||  |||| |||||| |||| |  || ||||||||||  ||||| |||||||| ||||| |||||||| ||||    
T  29909748 acaagaatagtgtatgtgttcatatctggtcgaataccttggcctttcaattttgttaataatgcaattgctttgtcaacatgatgttttttgcataaag 29909649  T
Q  153 catccaataaggaattgta 171  Q
    |||||||||  ||||||||    
T  29909648 catccaatatagaattgta 29909630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 228
Target Start/End: Complemental strand, 30029229 - 30029120
Alignment:
Q  119 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatctcatctataa 218  Q
    |||||||||||||  | ||||||||||||||| || |||| ||||||| |||| ||||| |||| ||| | ||| ||| ||| |  ||||||||| ||||    
T  30029229 attgccttgtcaagattatggtttttgcacaacgcgtccattaaggaagtgtacgtgatcacattagctgcttgacctctatcacacatctcatcaataa 30029130  T
Q  219 gatcccaaac 228  Q
    ||||| ||||    
T  30029129 gatccaaaac 30029120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 29099449 - 29099379
Alignment:
Q  104 ttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagt 174  Q
    |||||||| ||||  ||||| |||||||| |||||| ||||||| |||||||| ||||  |||||||||||    
T  29099449 ttcgttaacaatgcaattgctttgtcaacttgatgggttttgcataaagcatctaatatagaattgtaagt 29099379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 4e-59; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 24227028 - 24226802
Alignment:
Q  1 tgataaaccacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttg 100  Q
    ||||||||| ||||||||||| |||||| ||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||| |||||||||| |  |||    
T  24227028 tgataaacctcttgtgcatccctaagtc-ttccatttttgcacagtccatcaacaagtatagtgtatgtatagatatttggccgaattccttgattcttg 24226930  T
Q  101 atcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatat 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||| ||||| |||||||||||||| |  | ||| ||||| ||| |||    
T  24226929 atcttcgttaacaatgtgattgccttgtcaacctgatggtttttgcacaatccatctaataaagaattgtaagtgattatgttagctggttgacctctat 24226830  T
Q  201 tatgcatctcatctataagatcccaaac 228  Q
     |||||||||| |||| | |||||||||    
T  24226829 catgcatctcacctatgaaatcccaaac 24226802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 24219143 - 24219198
Alignment:
Q  119 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagt 174  Q
    |||||||||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  24219143 attgccttgtcaacatgatggtttttgcataaagcatccaataaagaattgtaagt 24219198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 16351223 - 16351084
Alignment:
Q  37 tttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctga 136  Q
    |||||||||||| |||| ||||||| |||| ||  |||||||||| ||||| || || ||||| || ||| | | |||||  || ||||||||||| ||     
T  16351223 tttgcatagtccatcaataagtatattgtatgtgcacatatttggttgaatgccatgttctttaattttcttaactaatgcaatagccttgtcaacatgt 16351124  T
Q  137 tggtttttgcacaaagcatccaataaggaattgtaagtga 176  Q
    ||||||||||| ||| |||| |  || |||||||||||||    
T  16351123 tggtttttgcagaaaacatctatcaaagaattgtaagtga 16351084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 177
Target Start/End: Complemental strand, 33998134 - 33997973
Alignment:
Q  15 tgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaa-ta 113  Q
    |||||||| ||||| |||||| |||||||||||| ||||  ||| |||| || ||  | | |||||||||||| ||||||||||| || ||| ||||  |    
T  33998134 tgcatcctcaagtc-ttccatctttgcatagtccatcaattagtgtagtatatgtgcaaacatttggctgaataccttggtctttaat-ttccttaacca 33998037  T
Q  114 atgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgat 177  Q
    |||| ||||||| ||| |  ||||| |||||||| ||||||| |||||| ||||| ||||||||    
T  33998036 atgtaattgcctggtcgagatgatgatttttgcataaagcatgcaataaagaattataagtgat 33997973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 43660 - 43884
Alignment:
Q  1 tgataaaccacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttg 100  Q
    ||||||||| ||||||||||| |||||  ||||||||||||| ||||| ||||||||||||||||| ||||| |||| | |||||||||||||||  |||    
T  43660 tgataaacctcttgtgcatccctaagtt-ttccatttttgcacagtccatcaacaagtatagtgtatgtatagatatctagctgaattccttggttcttg 43758  T
Q  101 atcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatat 200  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||  |||| ||||| ||| |||||||||| |  |  || ||||| ||| |||    
T  43759 atcttcgttaacaaagtgattgccttgtcaacctgatggtttttgcacaatccatctaataaagaactgtaagtgataatgttcgctggttgacctctat 43858  T
Q  201 tatgcatctcatctataagatcccaa 226  Q
     ||||||||||||||||| |||||||    
T  43859 catgcatctcatctataaaatcccaa 43884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 9782746 - 9782587
Alignment:
Q  2 gataaaccacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttga 101  Q
    ||||||||  ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||| |||||| |||||||||||||| |||||| |    
T  9782746 gataaaccctttgtgcatccttaagtc-ttccatttttgcacagtccatcaacaagtatagtgtatgtacacatatctggctgaattccttcgtctttca 9782648  T
Q  102 tcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataa 162  Q
    |||| ||||| || |  ||||||||||||||||||||| ||||||||||||||||||||||    
T  9782647 tctttgttaacaacgcaattgccttgtcaacctgatggattttgcacaaagcatccaataa 9782587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 226
Target Start/End: Complemental strand, 3433 - 3217
Alignment:
Q  9 cacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgt 108  Q
    |||||||||||||||||| |||||| | |||||||||||| || | ||||||| |||| || ||||||| | | ||||| ||||||||||| || ||| |    
T  3433 cacttgtgcatccttaag-ccttccttgtttgcatagtccatcgataagtatattgtatgtgtacatatctagttgaatgccttggtctttaattttctt 3335  T
Q  109 taataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatc 208  Q
     | |||||  || ||||||||||| |||||||||||||| |||||||| | ||| |||||||||||||| | |||||| ||||| ||  ||| | |||||    
T  3334 gactaatgcaatagccttgtcaacatgatggtttttgcataaagcatctattaatgaattgtaagtgattatatcagctggttgaccactatcacgcatc 3235  T
Q  209 tcatctataagatcccaa 226  Q
    ||||| | ||| ||||||    
T  3234 tcatcaacaagctcccaa 3217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 32 - 213
Target Start/End: Complemental strand, 17251491 - 17251310
Alignment:
Q  32 ccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaa 131  Q
    |||| |||||| ||||| |||||||||||| |||| ||||||||||||| |||||| ||||| ||||| || ||| ||| |||||  |||||||| ||||    
T  17251491 ccatctttgcaaagtccatcaacaagtatattgtatgtatacatatttgcctgaataccttgatctttaattttctttagtaatgcaattgccttatcaa 17251392  T
Q  132 cctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatctcatc 213  Q
    | |||||| |||||||||||||||| |  || ||| ||||||| || |||| ||  ||||| ||| ||| ||||||||||||    
T  17251391 cttgatggcttttgcacaaagcatctatcaaagaagtgtaagttattacattaggtggttgacctctatcatgcatctcatc 17251310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 176
Target Start/End: Original strand, 125949 - 126088
Alignment:
Q  37 tttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctga 136  Q
    |||||||||||| |||| ||||||| |||| ||  |||||| ||| ||||| ||||| |||||||| ||| | | |||||  || |||||||||| ||||    
T  125949 tttgcatagtccatcaataagtatattgtatgtgcacatatctggttgaatgccttgatctttgattttcttaactaatgcaatagccttgtcaatctga 126048  T
Q  137 tggtttttgcacaaagcatccaataaggaattgtaagtga 176  Q
    ||||||||||| |||||||| | |||||||||||||||||    
T  126049 tggtttttgcataaagcatctattaaggaattgtaagtga 126088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 29 - 228
Target Start/End: Complemental strand, 8651446 - 8651248
Alignment:
Q  29 cttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgt 128  Q
    |||||||||||||||||||| ||||||||||  |||||  |  |||||| ||| | |||||  ||||||||||||||| | |||||||  |||||| |||    
T  8651446 cttccatttttgcatagtccatcaacaagtagtgtgtatatgaacatatatggttcaattctatggtctttgatcttcttcaataatgcaattgccatgt 8651347  T
Q  129 caacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatctcatctataagatcccaaac 228  Q
     ||||| |||||||||| |||| ||||| ||||| ||| |||||||||| |  |||||  |||| | | ||| |||||| ||||||||||||||| ||||    
T  8651346 aaaccttatggtttttgaacaatgcatcaaataaagaagtgtaagtgattatgtcagcttgttgacatctatcatgcat-tcatctataagatccaaaac 8651248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 6396 - 6231
Alignment:
Q  9 cacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgt 108  Q
    |||||||||||||||||| |||||| | |||||||||||| || | ||||||| |||| || ||||||||| | ||||| ||||||||||| || ||| |    
T  6396 cacttgtgcatccttaag-ccttccttgtttgcatagtccatcgataagtatattgtatgtgtacatatttagttgaatgccttggtctttaattttctt 6298  T
Q  109 taataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtg 175  Q
     | ||||   || ||||||||||| |||||||||||||| || ||||| | ||| ||||||||||||    
T  6297 gactaatacaatagccttgtcaacatgatggtttttgcataatgcatctattaaagaattgtaagtg 6231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 213
Target Start/End: Complemental strand, 4288 - 4134
Alignment:
Q  59 atagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatcca 158  Q
    |||||||| || ||||||||||| ||||  || |||||||| |  || ||||||||||  |||||||||||| |  ||||||||||||| ||||||||||    
T  4288 atagtgtatgtgtacatatttggttgaagaccctggtctttcaattttgttaataatgcaattgccttgtcacctggatggtttttgcataaagcatcca 4189  T
Q  159 ataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatctcatc 213  Q
    |||  ||| ||||||| || | |||||  ||||| ||| ||| ||||||||||||    
T  4188 atagagaactgtaagtaattatatcaggtggttgacctctatcatgcatctcatc 4134  T

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Target: scaffold0014 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 121279 - 121478
Alignment:
Q  9 cacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgt 108  Q
    ||||||||||| || ||||| |||| | |||||||||||| || | ||||||| |||| || |  ||||| || ||||| || || ||||| || ||| |    
T  121279 cacttgtgcattctcaagtc-ttccttctttgcatagtccatcgataagtatattgtatgtgttaatattgggttgaatgccctgatctttaattttctt 121377  T
Q  109 taataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatc 208  Q
     |  ||||  |||||||||||||| ||||| |||||||| ||||||| ||||||||||||||| ||||| | ||  |||||||| ||| ||| |||||||    
T  121378 gaccaatgcaattgccttgtcaacttgatgatttttgcataaagcatgcaataaggaattgtatgtgataatattggcaggttgacctctatcatgcatc 121477  T

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Target: scaffold0014; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 174
Target Start/End: Original strand, 104564 - 104701
Alignment:
Q  37 tttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctga 136  Q
    ||||||||  || |||| ||||||| |||| || ||||||| ||| ||||| ||||||||||| || ||| | | |||||| || || |||||||  |||    
T  104564 tttgcataacccatcaataagtatattgtatgtgtacatatctggttgaatgccttggtctttaattttcttgactaatgtcatagctttgtcaagatga 104663  T
Q  137 tggtttttgcacaaagcatccaataaggaattgtaagt 174  Q
    | ||||||||| |||||||| | ||| ||| |||||||    
T  104664 ttgtttttgcataaagcatctattaaagaactgtaagt 104701  T

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Target: scaffold0014; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 156
Target Start/End: Complemental strand, 137547 - 137428
Alignment:
Q  37 tttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctga 136  Q
    ||||||||  || |||| ||||||| |||| || ||||||||||| ||||| ||||||||||| || ||| | | |||||  || || |||||||  |||    
T  137547 tttgcataacccatcaataagtatattgtatgtgtacatatttggttgaatgccttggtctttaattttcttgactaatgcaatagctttgtcaagatga 137448  T
Q  137 tggtttttgcacaaagcatc 156  Q
    | ||||||||| ||||||||    
T  137447 ttgtttttgcataaagcatc 137428  T

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Target: scaffold0652 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 209
Target Start/End: Original strand, 1094 - 1293
Alignment:
Q  9 cacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgt 108  Q
    ||||||||||| || ||||| |||| | |||||||||||| || | ||||||| |||| || |  ||||| || ||||| || || ||||| || ||| |    
T  1094 cacttgtgcattctcaagtc-ttccttctttgcatagtccatcgataagtatactgtatgtgttaatattgggttgaatgccctgatctttaattttctt 1192  T
Q  109 taataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatc 208  Q
     |  ||||  |||||||||||||| ||||| ||||| || ||||| |  || ||||||||||||||||| ||||| |||||||| ||| ||| |||||||    
T  1193 gaccaatgcaattgccttgtcaacttgatgatttttacataaagcgtgtaagaaggaattgtaagtgatcacatcggcaggttgacctctatcatgcatc 1292  T

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Target: scaffold0308 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 213
Target Start/End: Complemental strand, 9195 - 8992
Alignment:
Q  9 cacttgtgcatccttaagtccttccatttttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgt 108  Q
    ||||||||| |||||||||| |||| | |||||||||||| || | ||||||| |||| || ||||||||||| |||||  || ||||||| |  ||| |    
T  9195 cacttgtgcgtccttaagtc-ttccttgtttgcatagtccatcgataagtatattgtatgtgtacatatttggttgaatgtctcggtctttaagtttctt 9097  T
Q  109 taataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatc 208  Q
     |  |||   |||||||||||||| ||| ||||||| || | ||| |  ||||| ||| || ||||||| ||||  |||||||| ||| ||| |||||||    
T  9096 gaccaattcaattgccttgtcaacatgacggtttttacatagagcgtgtaataatgaactgaaagtgattacattggcaggttgacctctatcatgcatc 8997  T
Q  209 tcatc 213  Q
    |||||    
T  8996 tcatc 8992  T

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Target: scaffold0177 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 209
Target Start/End: Complemental strand, 27526 - 27354
Alignment:
Q  37 tttgcatagtccgtcaacaagtatagtgtaagtatacatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctga 136  Q
    |||||||||||| || | ||||||| |||| || |  |||||||| ||||| ||||||||||| || ||| | |  ||||  | |||||||||||| ||     
T  27526 tttgcatagtccatcgataagtatattgtacgtgttaatatttggttgaatgccttggtctttaattttcttgaccaatgcaactgccttgtcaacttgg 27427  T
Q  137 tggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatct 209  Q
    |||||||| || ||||||| ||| |||||  |||| ||||| ||||| |||||||| ||| ||  ||||||||    
T  27426 tggtttttacataaagcatgcaagaaggaggtgtatgtgattacatcggcaggttgacctctagcatgcatct 27354  T

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Target: scaffold0237 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 22446 - 22379
Alignment:
Q  107 gttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagt 174  Q
    ||||||||||| ||||| ||||| || ||||| |||||||| |||||||||||||  |||||||||||    
T  22446 gttaataatgtaattgctttgtccacatgatgttttttgcataaagcatccaatatagaattgtaagt 22379  T

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Target: scaffold0654 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 1128 - 1218
Alignment:
Q  119 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatct 209  Q
    |||||||||||||| ||||||||||| || ||||| |  || ||||||||||||||||| ||||  ||| |||| ||| ||| ||||||||    
T  1128 attgccttgtcaacttgatggtttttacataaagcgtgtaagaaggaattgtaagtgatcacatttgcatgttgacctctatcatgcatct 1218  T

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Target: scaffold0086 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 209
Target Start/End: Original strand, 31225 - 31312
Alignment:
Q  122 gccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatgacatcagcaggttggcctatattatgcatct 209  Q
    ||||||||||| ||||||||||| || |||||||  ||||||||| | |||||||| ||||  | | |||||||| ||| ||||||||    
T  31225 gccttgtcaacatgatggtttttacataaagcatgtaataaggaagtataagtgattacattgggacgttggcctctatcatgcatct 31312  T

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Target: scaffold0051 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 176
Target Start/End: Original strand, 47764 - 47868
Alignment:
Q  72 acatatttggctgaattccttggtctttgatcttcgttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgta 171  Q
    |||||| ||| ||||| ||||| |||||||| ||  | | |||||  || |||||||||||||||| ||||||||| |||| ||  | ||| ||||||||    
T  47764 acatatctggttgaatcccttgatctttgattttattaactaatgcaatagccttgtcaacctgatagtttttgcataaagaatttattaaagaattgta 47863  T
Q  172 agtga 176  Q
    |||||    
T  47864 agtga 47868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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