View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14732_low_2 (Length: 601)

Name: NF14732_low_2
Description: NF14732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14732_low_2
NF14732_low_2
[»] chr3 (58 HSPs)
chr3 (194-592)||(19868941-19869339)
chr3 (194-417)||(25492036-25492259)
chr3 (196-571)||(27054850-27055230)
chr3 (477-593)||(30158072-30158188)
chr3 (477-593)||(2784079-2784195)
chr3 (477-576)||(25888513-25888612)
chr3 (477-574)||(42354456-42354553)
chr3 (477-593)||(10963365-10963481)
chr3 (477-593)||(10966874-10966990)
chr3 (477-571)||(20536628-20536722)
chr3 (477-574)||(6173396-6173493)
chr3 (477-570)||(9157969-9158062)
chr3 (477-565)||(4225896-4225984)
chr3 (477-593)||(10959858-10959974)
chr3 (477-592)||(2279663-2279778)
chr3 (489-592)||(16314645-16314748)
chr3 (489-592)||(16414811-16414914)
chr3 (489-592)||(18495639-18495742)
chr3 (477-592)||(18883172-18883287)
chr3 (477-592)||(4250344-4250459)
chr3 (489-576)||(5887040-5887127)
chr3 (489-576)||(5897024-5897111)
chr3 (489-592)||(18515785-18515888)
chr3 (489-592)||(23374785-23374888)
chr3 (477-571)||(28327423-28327517)
chr3 (477-571)||(28330748-28330842)
chr3 (487-574)||(9154792-9154879)
chr3 (477-571)||(18551648-18551742)
chr3 (489-592)||(29233644-29233746)
chr3 (487-565)||(54736183-54736262)
chr3 (477-571)||(3305829-3305923)
chr3 (477-575)||(36037000-36037097)
chr3 (194-307)||(20536337-20536452)
chr3 (243-404)||(22032373-22032535)
chr3 (194-255)||(3306147-3306209)
chr3 (199-272)||(26822048-26822120)
chr3 (363-532)||(26822189-26822358)
chr3 (198-278)||(30157805-30157885)
chr3 (535-592)||(44508767-44508824)
chr3 (194-310)||(11138574-11138688)
chr3 (194-310)||(22626316-22626430)
chr3 (198-305)||(46731585-46731691)
chr3 (248-326)||(35366486-35366562)
chr3 (194-255)||(4225621-4225681)
chr3 (200-251)||(31549573-31549625)
chr3 (194-237)||(5886751-5886794)
chr3 (194-237)||(5896735-5896778)
chr3 (194-237)||(6173117-6173160)
chr3 (485-548)||(11271060-11271122)
chr3 (194-237)||(16314357-16314400)
chr3 (194-237)||(16414523-16414566)
chr3 (194-237)||(18495351-18495394)
chr3 (194-237)||(23374497-23374540)
chr3 (284-326)||(18551895-18551937)
chr3 (198-278)||(13979643-13979722)
chr3 (194-278)||(28327720-28327802)
chr3 (194-278)||(28331045-28331127)
chr3 (202-262)||(35366573-35366632)
[»] chr5 (35 HSPs)
chr5 (197-521)||(1810197-1810521)
chr5 (194-571)||(2499766-2500147)
chr5 (194-326)||(21680586-21680717)
chr5 (196-571)||(33320685-33321063)
chr5 (194-317)||(33921333-33921455)
chr5 (198-571)||(9690742-9691117)
chr5 (477-593)||(26548051-26548167)
chr5 (477-593)||(26551610-26551726)
chr5 (477-593)||(28562404-28562520)
chr5 (477-593)||(28565972-28566088)
chr5 (477-593)||(40799961-40800077)
chr5 (477-592)||(19686128-19686243)
chr5 (477-592)||(34652800-34652915)
chr5 (477-574)||(2453259-2453356)
chr5 (477-574)||(3195070-3195167)
chr5 (477-576)||(4731876-4731975)
chr5 (491-592)||(17944609-17944710)
chr5 (477-592)||(19689511-19689626)
chr5 (282-570)||(26337963-26338256)
chr5 (194-310)||(34405975-34406090)
chr5 (385-561)||(35432442-35432619)
chr5 (198-533)||(36330741-36331074)
chr5 (489-592)||(26726904-26727007)
chr5 (505-592)||(25185345-25185432)
chr5 (360-532)||(36335037-36335210)
chr5 (198-272)||(14616437-14616510)
chr5 (198-310)||(7649950-7650060)
chr5 (194-237)||(26727252-26727295)
chr5 (477-521)||(20077653-20077697)
chr5 (282-325)||(35432330-35432373)
chr5 (200-233)||(20056160-20056193)
chr5 (552-592)||(1810528-1810568)
chr5 (194-310)||(15532204-15532318)
chr5 (194-310)||(15542386-15542500)
chr5 (215-278)||(19686443-19686506)
[»] chr7 (50 HSPs)
chr7 (197-571)||(6964266-6964644)
chr7 (194-565)||(38431378-38431753)
chr7 (196-571)||(3540930-3541307)
chr7 (198-592)||(16546961-16547359)
chr7 (198-592)||(16618303-16618701)
chr7 (477-594)||(2349415-2349532)
chr7 (477-594)||(22232672-22232789)
chr7 (477-594)||(22253950-22254067)
chr7 (477-594)||(22257214-22257331)
chr7 (477-593)||(11825400-11825516)
chr7 (477-594)||(748086-748203)
chr7 (477-594)||(8257632-8257749)
chr7 (477-594)||(20100600-20100717)
chr7 (477-592)||(8257846-8257961)
chr7 (477-593)||(8397802-8397918)
chr7 (477-592)||(23467213-23467328)
chr7 (477-593)||(5826753-5826869)
chr7 (477-571)||(43549172-43549266)
chr7 (194-310)||(6967274-6967389)
chr7 (194-310)||(17866357-17866472)
chr7 (489-592)||(2251829-2251932)
chr7 (489-592)||(23598820-23598923)
chr7 (194-272)||(17857884-17857962)
chr7 (477-592)||(26182260-26182375)
chr7 (489-576)||(26460439-26460526)
chr7 (491-592)||(22083502-22083603)
chr7 (489-571)||(710074-710156)
chr7 (477-571)||(44017837-44017931)
chr7 (363-570)||(26153131-26153342)
chr7 (198-337)||(17152173-17152310)
chr7 (396-574)||(26808694-26808871)
chr7 (477-555)||(42606279-42606356)
chr7 (477-562)||(6214420-6214505)
chr7 (481-563)||(23775868-23775950)
chr7 (194-255)||(709787-709847)
chr7 (199-312)||(28577687-28577798)
chr7 (198-286)||(36842945-36843032)
chr7 (194-237)||(2252177-2252220)
chr7 (194-237)||(23598532-23598575)
chr7 (198-272)||(24783573-24783646)
chr7 (239-312)||(17601877-17601950)
chr7 (428-532)||(28577913-28578017)
chr7 (195-310)||(294987-295101)
chr7 (198-237)||(20100950-20100989)
chr7 (485-532)||(42859008-42859054)
chr7 (477-515)||(30058196-30058234)
chr7 (487-548)||(17601686-17601747)
chr7 (200-237)||(26460771-26460808)
chr7 (194-326)||(9765912-9766042)
chr7 (194-278)||(23759613-23759696)
[»] chr1 (34 HSPs)
chr1 (194-569)||(34552442-34552821)
chr1 (200-571)||(18392372-18392747)
chr1 (196-571)||(6205859-6206239)
chr1 (194-335)||(49716589-49716731)
chr1 (194-323)||(49720083-49720213)
chr1 (477-573)||(17902833-17902929)
chr1 (477-574)||(49716349-49716446)
chr1 (477-574)||(49719831-49719928)
chr1 (477-593)||(28918332-28918448)
chr1 (477-593)||(37641825-37641941)
chr1 (477-592)||(20981318-20981433)
chr1 (477-571)||(50197004-50197098)
chr1 (194-310)||(10765046-10765161)
chr1 (194-310)||(13493389-13493504)
chr1 (477-571)||(33898305-33898399)
chr1 (466-592)||(20964415-20964540)
chr1 (489-576)||(16838991-16839078)
chr1 (489-576)||(16848921-16849008)
chr1 (489-592)||(24200301-24200404)
chr1 (477-571)||(23441329-23441423)
chr1 (477-569)||(3087770-3087862)
chr1 (196-278)||(50196721-50196803)
chr1 (198-310)||(13496114-13496224)
chr1 (194-237)||(17902557-17902600)
chr1 (194-237)||(20981665-20981708)
chr1 (215-307)||(16190203-16190295)
chr1 (198-237)||(24200017-24200056)
chr1 (194-237)||(37642167-37642210)
chr1 (477-515)||(5317893-5317931)
chr1 (194-256)||(32505861-32505922)
chr1 (200-237)||(16838709-16838746)
chr1 (200-237)||(16848639-16848676)
chr1 (196-236)||(14546487-14546527)
chr1 (203-271)||(15297492-15297559)
[»] chr8 (32 HSPs)
chr8 (194-571)||(39659716-39660096)
chr8 (215-571)||(13332068-13332428)
chr8 (194-336)||(9467283-9467425)
chr8 (194-337)||(453803-453947)
chr8 (194-564)||(5828013-5828387)
chr8 (477-592)||(20262514-20262629)
chr8 (477-592)||(21049144-21049259)
chr8 (477-594)||(14187958-14188075)
chr8 (477-594)||(22654219-22654336)
chr8 (477-593)||(5964214-5964330)
chr8 (477-592)||(30645432-30645547)
chr8 (477-591)||(27863599-27863713)
chr8 (489-592)||(17013089-17013192)
chr8 (477-592)||(18696020-18696135)
chr8 (489-592)||(17544009-17544112)
chr8 (489-574)||(24903541-24903626)
chr8 (477-592)||(31981307-31981422)
chr8 (491-582)||(24435000-24435091)
chr8 (491-582)||(24445046-24445137)
chr8 (477-562)||(587302-587387)
chr8 (477-562)||(626535-626620)
chr8 (477-532)||(31986294-31986349)
chr8 (196-307)||(12575306-12575416)
chr8 (194-237)||(24903254-24903297)
chr8 (477-515)||(453624-453662)
chr8 (199-255)||(5980067-5980124)
chr8 (194-233)||(17012801-17012840)
chr8 (194-233)||(17544361-17544400)
chr8 (194-236)||(22654570-22654612)
chr8 (233-326)||(12820690-12820782)
chr8 (200-233)||(17931296-17931329)
chr8 (477-521)||(31468169-31468213)
[»] chr4 (37 HSPs)
chr4 (194-571)||(13979113-13979493)
chr4 (198-571)||(15851152-15851529)
chr4 (194-322)||(33400079-33400207)
chr4 (194-571)||(19928859-19929238)
chr4 (477-593)||(18859736-18859852)
chr4 (477-574)||(10247792-10247889)
chr4 (477-574)||(11702632-11702729)
chr4 (489-574)||(14701882-14701967)
chr4 (489-592)||(3719553-3719656)
chr4 (489-576)||(49636581-49636668)
chr4 (196-310)||(647209-647322)
chr4 (477-571)||(23653254-23653348)
chr4 (477-571)||(26703536-26703630)
chr4 (196-272)||(650481-650557)
chr4 (196-337)||(37176855-37176993)
chr4 (466-592)||(10385899-10386018)
chr4 (489-576)||(3734287-3734374)
chr4 (489-576)||(49639874-49639961)
chr4 (496-598)||(33400392-33400494)
chr4 (477-554)||(17670309-17670386)
chr4 (477-565)||(11560799-11560886)
chr4 (492-562)||(24605307-24605377)
chr4 (477-562)||(7394916-7395000)
chr4 (194-310)||(12172099-12172214)
chr4 (194-237)||(3719265-3719308)
chr4 (485-532)||(39050602-39050649)
chr4 (194-307)||(2542012-2542124)
chr4 (215-272)||(21217359-21217416)
chr4 (363-464)||(21217499-21217600)
chr4 (194-255)||(8871474-8871537)
chr4 (198-307)||(26062698-26062808)
chr4 (194-237)||(3734619-3734662)
chr4 (194-237)||(14702212-14702255)
chr4 (236-307)||(24605051-24605121)
chr4 (194-237)||(49639586-49639629)
chr4 (194-268)||(48013158-48013233)
chr4 (201-237)||(11561123-11561159)
[»] scaffold0273 (1 HSPs)
scaffold0273 (196-570)||(19515-19894)
[»] chr6 (51 HSPs)
chr6 (235-569)||(35026932-35027270)
chr6 (194-592)||(12746764-12747169)
chr6 (194-326)||(11410990-11411123)
chr6 (194-571)||(28894239-28894620)
chr6 (196-323)||(33678947-33679076)
chr6 (477-592)||(34502301-34502416)
chr6 (477-598)||(5618262-5618383)
chr6 (477-574)||(11410741-11410838)
chr6 (477-593)||(14966188-14966304)
chr6 (477-582)||(14969679-14969784)
chr6 (194-310)||(14790745-14790860)
chr6 (477-592)||(17231814-17231929)
chr6 (477-592)||(28117798-28117913)
chr6 (477-594)||(3826863-3826980)
chr6 (477-565)||(31123418-31123506)
chr6 (477-571)||(15578960-15579054)
chr6 (477-571)||(33679234-33679328)
chr6 (477-574)||(9313830-9313927)
chr6 (194-310)||(14795773-14795888)
chr6 (492-592)||(22920487-22920587)
chr6 (477-592)||(2331240-2331355)
chr6 (489-571)||(7560232-7560314)
chr6 (489-571)||(11296195-11296277)
chr6 (477-571)||(2330609-2330703)
chr6 (477-549)||(7560144-7560216)
chr6 (477-571)||(17696569-17696664)
chr6 (485-562)||(20189483-20189560)
chr6 (485-562)||(22146431-22146508)
chr6 (477-529)||(13095764-13095816)
chr6 (491-562)||(16731362-16731433)
chr6 (194-237)||(2331588-2331631)
chr6 (198-307)||(19664674-19664782)
chr6 (198-255)||(22221903-22221959)
chr6 (198-255)||(22247738-22247794)
chr6 (198-310)||(1838602-1838712)
chr6 (545-593)||(14969625-14969673)
chr6 (239-307)||(15535184-15535252)
chr6 (282-326)||(15578763-15578807)
chr6 (200-255)||(23842565-23842621)
chr6 (194-237)||(22920835-22920878)
chr6 (477-518)||(26390970-26391011)
chr6 (477-521)||(6856612-6856656)
chr6 (194-310)||(13017193-13017307)
chr6 (200-255)||(23848073-23848129)
chr6 (198-278)||(27649259-27649338)
chr6 (194-237)||(17232161-17232204)
chr6 (194-278)||(28974140-28974226)
chr6 (198-286)||(17696849-17696936)
chr6 (194-307)||(32427429-32427540)
chr6 (485-521)||(28974433-28974469)
chr6 (215-278)||(34502614-34502677)
[»] chr2 (31 HSPs)
chr2 (196-571)||(38315807-38316186)
chr2 (194-337)||(29435965-29436109)
chr2 (208-339)||(13572059-13572192)
chr2 (477-593)||(11056299-11056415)
chr2 (477-574)||(29435727-29435824)
chr2 (477-593)||(11059757-11059873)
chr2 (477-574)||(1503478-1503575)
chr2 (477-574)||(1506682-1506779)
chr2 (477-574)||(4577801-4577898)
chr2 (476-592)||(30719733-30719849)
chr2 (477-592)||(15704015-15704130)
chr2 (477-592)||(15719319-15719434)
chr2 (477-593)||(13518262-13518377)
chr2 (489-576)||(18938868-18938955)
chr2 (489-592)||(22592472-22592575)
chr2 (477-571)||(40677817-40677911)
chr2 (358-532)||(40139140-40139314)
chr2 (477-594)||(18011907-18012016)
chr2 (486-574)||(38326319-38326413)
chr2 (198-307)||(23673353-23673461)
chr2 (194-272)||(36327090-36327167)
chr2 (194-307)||(32575689-32575801)
chr2 (198-286)||(16295048-16295135)
chr2 (194-287)||(24384929-24385023)
chr2 (194-326)||(32074160-32074293)
chr2 (194-237)||(18939200-18939243)
chr2 (194-237)||(22592819-22592862)
chr2 (477-511)||(25925175-25925209)
chr2 (477-518)||(40778988-40779029)
chr2 (194-310)||(31528517-31528631)
chr2 (194-278)||(40677532-40677614)
[»] scaffold0068 (1 HSPs)
scaffold0068 (194-326)||(33734-33865)
[»] scaffold0401 (1 HSPs)
scaffold0401 (194-592)||(4217-4619)
[»] scaffold0043 (3 HSPs)
scaffold0043 (196-571)||(13571-13950)
scaffold0043 (196-337)||(11467-11607)
scaffold0043 (477-516)||(5631-5670)
[»] scaffold0360 (2 HSPs)
scaffold0360 (477-574)||(2430-2527)
scaffold0360 (477-574)||(6262-6359)
[»] scaffold0062 (2 HSPs)
scaffold0062 (477-592)||(52927-53042)
scaffold0062 (477-592)||(67876-67991)
[»] scaffold0134 (1 HSPs)
scaffold0134 (492-592)||(7196-7296)
[»] scaffold0214 (3 HSPs)
scaffold0214 (477-592)||(13565-13679)
scaffold0214 (477-592)||(27581-27695)
scaffold0214 (477-592)||(20014-20129)
[»] scaffold0007 (1 HSPs)
scaffold0007 (385-560)||(92423-92601)
[»] scaffold0012 (2 HSPs)
scaffold0012 (489-592)||(26935-27039)
scaffold0012 (194-237)||(26647-26690)
[»] scaffold0083 (3 HSPs)
scaffold0083 (477-592)||(29280-29395)
scaffold0083 (477-592)||(53077-53192)
scaffold0083 (194-438)||(42716-42961)
[»] scaffold0045 (1 HSPs)
scaffold0045 (198-325)||(90306-90432)
[»] scaffold1048 (1 HSPs)
scaffold1048 (489-574)||(1378-1463)
[»] scaffold0175 (2 HSPs)
scaffold0175 (477-574)||(28704-28801)
scaffold0175 (194-237)||(28428-28471)
[»] scaffold0067 (2 HSPs)
scaffold0067 (489-582)||(27330-27423)
scaffold0067 (200-237)||(27668-27705)
[»] scaffold0352 (1 HSPs)
scaffold0352 (198-307)||(2627-2734)
[»] scaffold0014 (1 HSPs)
scaffold0014 (477-532)||(228652-228707)
[»] scaffold0766 (1 HSPs)
scaffold0766 (229-307)||(3635-3713)
[»] scaffold0002 (1 HSPs)
scaffold0002 (385-513)||(468418-468544)
[»] scaffold0264 (1 HSPs)
scaffold0264 (198-272)||(24193-24266)
[»] scaffold1431 (1 HSPs)
scaffold1431 (477-520)||(475-518)


Alignment Details
Target: chr3 (Bit Score: 303; Significance: 1e-170; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 194 - 592
Target Start/End: Complemental strand, 19869339 - 19868941
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    ||||||||||||||||||| |||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19869339 agatatttggcaagtgtactaaaatctatcaaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 19869240  T
Q  294 ggatgtagtaaatttatgggttgctctaggcagctgaatttggtgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacaga 393  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19869239 ggatgtagtaaatttatgggttgccttaggcagctgaatttggtgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacata 19869140  T
Q  394 taatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaactaaatagtttt 493  Q
    ||||||||||||||||||||||||||||| | ||||||||||| ||  |||||| ||| |||||||||||||||||||| |  |||||||||||||||||    
T  19869139 taatcaagcctttgaatcctctattgttcacggtgaataattttctcatcttctctctcaatgttcacctaactctatgacggattaactaaatagtttt 19869040  T
Q  494 gatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttattcat 592  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| || ||||||    
T  19869039 gatcaatctcttgactcaaaactctttcctaagttataactttttaatctcttaaaccaattgaataaccgcggaagcaataacagaacgttaattcat 19868941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 194 - 417
Target Start/End: Complemental strand, 25492259 - 25492036
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    ||||| ||| |||||||||||||| ||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  25492259 agataattgacaagtgtaccaaaagctatcaaaatagtaataaagttcgtatccacgaggatcgttgttaatttctacttagcaagttcattaaaataaa 25492160  T
Q  294 ggatgtagtaaatttatgggttgctctaggcagctgaatttggtgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacaga 393  Q
     ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25492159 agatgtagtaaatttatgggttgccctaggcacctgaatttggtgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacaga 25492060  T
Q  394 taatcaagcctttgaatcctctat 417  Q
    |||||||| |||||||||||||||    
T  25492059 taatcaagtctttgaatcctctat 25492036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 196 - 571
Target Start/End: Complemental strand, 27055230 - 27054850
Alignment:
Q  196 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 295  Q
    ||||||||||||  |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  27055230 atatttggcaagcataccaaaa-ctatcgaagtagtaataaatttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaag 27055132  T
Q  296 atgtagtaaa-tttat-gggttgctctaggcagctgaatttg-gtgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacag 392  Q
    |||||||||| ||||| ||||||| |||||||| || |||||  |  |||||| |||||  | |  ||| |||| | |||||  | ||  | ||||||||    
T  27055131 atgtagtaaattttatggggttgccctaggcagttggatttgattttataaaacgtaaa-caaagtcaa-taaaatagtttgataattggattaaaacag 27055034  T
Q  393 ataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaata 488  Q
    || ||||||||||| ||||||||||||| || |||||| |||||||    |||||| ||| || |   || ||||| || || | || ||||||||| |     
T  27055033 atgatcaagcctttcgaatcctctattgctcaccgtgagtaatttggctctcttctctctcaaagaaattaacctagctttacgacaaattaactaagtg 27054934  T
Q  489 gttttgatcaatctcttgactc-aaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  27054933 gttttgatcaatctcttgactcaaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagc 27054850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 477 - 593
Target Start/End: Original strand, 30158072 - 30158188
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  30158072 attaactaagtagatttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 30158171  T
Q  577 cagaacatttattcatg 593  Q
     ||||| || |||||||    
T  30158172 aagaacgttaattcatg 30158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 477 - 593
Target Start/End: Complemental strand, 2784195 - 2784079
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| | ||||||||||    
T  2784195 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccacagaagcgataa 2784096  T
Q  577 cagaacatttattcatg 593  Q
     ||||| || |||||||    
T  2784095 aagaacgttaattcatg 2784079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 477 - 576
Target Start/End: Original strand, 25888513 - 25888612
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  25888513 attaactaagtagttttgatcaatctcttgactcaaaaccatttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 25888612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 477 - 574
Target Start/End: Original strand, 42354456 - 42354553
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||||||    
T  42354456 attaactaattagttttgatcaatctcttgactcaaaaccctttcttaagttaaaaccttttaatctcttaaaccgattgaataaccgcagaagcgat 42354553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 477 - 593
Target Start/End: Complemental strand, 10963481 - 10963365
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||||| |||||||||||||    
T  10963481 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataactgcggaagcgataa 10963382  T
Q  577 cagaacatttattcatg 593  Q
     || || || |||||||    
T  10963381 aagtacgttaattcatg 10963365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 477 - 593
Target Start/End: Complemental strand, 10966990 - 10966874
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||||| |||||||||||||    
T  10966990 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataactgcggaagcgataa 10966891  T
Q  577 cagaacatttattcatg 593  Q
     || || || |||||||    
T  10966890 aagtacgttaattcatg 10966874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 477 - 571
Target Start/End: Original strand, 20536628 - 20536722
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||| ||||    
T  20536628 attaactaaatagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcgaaagc 20536722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 477 - 574
Target Start/End: Original strand, 6173396 - 6173493
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  6173396 attatctaagtagttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgat 6173493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 477 - 570
Target Start/End: Complemental strand, 9158062 - 9157969
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaag 570  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||| |||||||||||||||||||    
T  9158062 attaactaattagttttgatcaatctcttgactcaaaaccctttcttaatttataaccttttaatctcttaaactgattgaataaccgcggaag 9157969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 477 - 565
Target Start/End: Original strand, 4225896 - 4225984
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgc 565  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||    
T  4225896 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgc 4225984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 477 - 593
Target Start/End: Complemental strand, 10959974 - 10959858
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||||| |||||||||||||    
T  10959974 attaattaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataactgcggaagcgataa 10959875  T
Q  577 cagaacatttattcatg 593  Q
     || || || |||||||    
T  10959874 aagtacgttaattcatg 10959858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 477 - 592
Target Start/End: Original strand, 2279663 - 2279778
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||  |||||||| |||||||||||||||||| |||||||||||      
T  2279663 attaactaagtagttttgatcaatctcttgaatcaaaaccctttcctaagttataaccctttaatctcttaaaccgattgaataactgcggaagcgatgt 2279762  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  2279763 cagaacgttaattcat 2279778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 489 - 592
Target Start/End: Original strand, 16314645 - 16314748
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 588  Q
    ||||||||||||||||||| |||||||||| || ||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||| || ||    
T  16314645 gttttgatcaatctcttgaatcaaaaccctatcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataaaagaacgttaat 16314744  T
Q  589 tcat 592  Q
    ||||    
T  16314745 tcat 16314748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 489 - 592
Target Start/End: Original strand, 16414811 - 16414914
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 588  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||| || ||    
T  16414811 gtttttatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataaaagaacgttaat 16414910  T
Q  589 tcat 592  Q
    ||||    
T  16414911 tcat 16414914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 489 - 592
Target Start/End: Original strand, 18495639 - 18495742
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 588  Q
    ||||||||||||||||||| |||||||||| || ||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||| || ||    
T  18495639 gttttgatcaatctcttgaatcaaaaccctatcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataaaagaacgttaat 18495738  T
Q  589 tcat 592  Q
    ||||    
T  18495739 tcat 18495742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 18883287 - 18883172
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| || |||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||||||| |||||||||      
T  18883287 attaactaattaattttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccaattgaataaccgtggaagcgatgt 18883188  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  18883187 cagaacgttaattcat 18883172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 4250459 - 4250344
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| | |||||||||||||||||||||||||||||||||  |||||||||| ||||||||| |||||||||||||||||||| |||||| ||      
T  4250459 attaactaagtggttttgatcaatctcttgactcaaaaccctttccgaagttataaccttttaatctcttaaaccgattgaataaccgtggaagctatgt 4250360  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  4250359 cagaacgttaattcat 4250344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 489 - 576
Target Start/End: Original strand, 5887040 - 5887127
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  5887040 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataa 5887127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 489 - 576
Target Start/End: Original strand, 5897024 - 5897111
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  5897024 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataa 5897111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 489 - 592
Target Start/End: Original strand, 18515785 - 18515888
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 588  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||| || ||    
T  18515785 gtttttatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaacgttaat 18515884  T
Q  589 tcat 592  Q
    ||||    
T  18515885 tcat 18515888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 489 - 592
Target Start/End: Original strand, 23374785 - 23374888
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 588  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| |||| ||||| || ||    
T  23374785 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagctataaaagaacgttaat 23374884  T
Q  589 tcat 592  Q
    ||||    
T  23374885 tcat 23374888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 477 - 571
Target Start/End: Complemental strand, 28327517 - 28327423
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||||||| |||||||||    
T  28327517 attaactaagtggttttgatcaatctcttgacacaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataatcgcggaagc 28327423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 477 - 571
Target Start/End: Complemental strand, 28330842 - 28330748
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||||||| |||||||||    
T  28330842 attaactaagtggttttgatcaatctcttgacacaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataatcgcggaagc 28330748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 487 - 574
Target Start/End: Complemental strand, 9154879 - 9154792
Alignment:
Q  487 tagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||  ||||||||    
T  9154879 tagttttgatcaatctcttgactcaaaatcctttcctaagttataaccttttaatctcttaaaccgattgaataaccgttgaagcgat 9154792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 477 - 571
Target Start/End: Complemental strand, 18551742 - 18551648
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||| | |||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| | ||||||    
T  18551742 attaactaagtggttttgatcaatctcttgtctcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataacagtggaagc 18551648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 489 - 592
Target Start/End: Original strand, 29233644 - 29233746
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 588  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| |||||| ||||||||||| || |||||||||| ||||| || ||    
T  29233644 gttttgatcaatctcttgagtcaaaaccctttct-aagttataaccttttaatctcttaaactgattgaataactgcagaagcgataaaagaacgttaat 29233742  T
Q  589 tcat 592  Q
    ||||    
T  29233743 tcat 29233746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 487 - 565
Target Start/End: Original strand, 54736183 - 54736262
Alignment:
Q  487 tagttttgatcaatctcttgactcaaaa-ccctttcttaagttataactttttaatcttttaaaccgattgaataaccgc 565  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| |||||||||||||||||||||    
T  54736183 tagttttgatcaatctcttgactcaaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgc 54736262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 477 - 571
Target Start/End: Complemental strand, 3305923 - 3305829
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||   ||||||||| ||||||||| ||||| ||||||||||| |||||||||    
T  3305923 attaactaagtggttttgatcaatctcttgacacaaaaccctttccggagttataaccttttaatctcttaaatcgattgaataatcgcggaagc 3305829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 477 - 575
Target Start/End: Original strand, 36037000 - 36037097
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgata 575  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||| || |||||||| ||||||||| ||||||||| ||||||||   ||||||||||    
T  36037000 attaacttattagctttgatcaatctcttgactcaaaaccctttcctaggttataaccttttaatctcttaaaccga-tgaataactttggaagcgata 36037097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 20536337 - 20536452
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaat--aaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaata 291  Q
    |||||||||| |||||||||||||||||| ||| ||||||   |||| |||||||||||||||| ||  |||| |||||||||| || ||| |||  | |    
T  20536337 agatatttggaaagtgtaccaaaaactattgaagtagtaaataaaagatcgtatccacgaggactgtatttaacttctacttagaaatttcattattaaa 20536436  T
Q  292 aaggatgtagtaaatt 307  Q
    ||||||||||||||||    
T  20536437 aaggatgtagtaaatt 20536452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 243 - 404
Target Start/End: Original strand, 22032373 - 22032535
Alignment:
Q  243 tatccacgaggaccgttgttaatttcta-cttagcaagttcgttaaaataaaggatgtagtaaattt-atgggttgctctaggcagctgaatttggtgca 340  Q
    |||||||||||||  ||||||| || || || | ||| ||||||||||||| |||| || ||||||| || | |||| ||||||||   |||||||||||    
T  22032373 tatccacgaggactattgttaagttttaactcaacaatttcgttaaaataa-ggatataataaattttatagtttgccctaggcagtcaaatttggtgca 22032471  T
Q  341 taaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagataatcaagcct 404  Q
    ||||||||||||   | |||||||| |||||||| |||||||| ||||||| || || ||||||    
T  22032472 taaaatgtaaatagaacgcaattaacttggtttgaaatttatactaaaacatatgattaagcct 22032535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 3306209 - 3306147
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagt-aataaagttcgtatccacgaggac 255  Q
    |||||||||||||||||||||| |||||||||| || | ||| ||||||||||||||||||||    
T  3306209 agatatttggcaagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggac 3306147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 199 - 272
Target Start/End: Original strand, 26822048 - 26822120
Alignment:
Q  199 tttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact 272  Q
    ||||| ||||||||||||| |||||||| || ||||||| ||||||||||| ||||||| ||||||||| ||||    
T  26822048 tttggaaagtgtaccaaaa-ctatcgaagtaataataaaattcgtatccacaaggaccgctgttaatttttact 26822120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 363 - 532
Target Start/End: Original strand, 26822189 - 26822358
Alignment:
Q  363 taaattggtttggaatttataataaaacagataatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacc 462  Q
    ||||||||||||  | ||| | ||||| | || ||||||||||  |||| |||||||  | | ||||||||||||||  |||||| ||| ||||||||||    
T  26822189 taaattggtttgagaattagattaaaataaatgatcaagccttcaaatcatctattgcacactgtgaataatttgctcctcttctttctcaatgttcacc 26822288  T
Q  463 taactctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 532  Q
    ||  | ||   |  ||||||  |||||||||||||||| |||||| ||||||| ||||| ||||||||||    
T  26822289 tagttttacaactgattaacctaatagttttgatcaatttcttgagtcaaaactctttcctaagttataa 26822358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 198 - 278
Target Start/End: Original strand, 30157805 - 30157885
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagt-aataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 278  Q
    |||||||||||||||||| |||||||||| || | ||| |||||||||||||||||||| | ||||||| || |||||||||    
T  30157805 atttggcaagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggactg-tgttaatctcaacttagcaa 30157885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 535 - 592
Target Start/End: Complemental strand, 44508824 - 44508767
Alignment:
Q  535 ttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttattcat 592  Q
    ||||||||| ||||||||||||||||||||||||||||||  |||||| || ||||||    
T  44508824 ttttaatctcttaaaccgattgaataaccgcggaagcgatgtcagaacgttaattcat 44508767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 310
Target Start/End: Original strand, 11138574 - 11138688
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||| ||||||  | |||||| || ||| ||||||||| ||||||||||| ||  |||| ||||||||||||| ||| |||  | |||    
T  11138574 agatatttggcaagtgaaccaaattcgatcgaagtaataa-aaagttcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaa 11138672  T
Q  294 ggatgtagtaaatttat 310  Q
    ||||||| |||||||||    
T  11138673 ggatgta-taaatttat 11138688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 310
Target Start/End: Original strand, 22626316 - 22626430
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||| ||||||  | |||||| || ||| ||||||||| ||||||||||| ||  |||| ||||||||||||| ||| |||  | |||    
T  22626316 agatatttggcaagtgaaccaaattcgatcgaagtaataa-aaagttcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaa 22626414  T
Q  294 ggatgtagtaaatttat 310  Q
    ||||||| |||||||||    
T  22626415 ggatgta-taaatttat 22626430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 305
Target Start/End: Complemental strand, 46731691 - 46731585
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagt-aataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagga 296  Q
    |||||||||||| || ||||||||||||| || | |||||| || ||||||||||||||||||||||| ||||||| ||||| ||| |||  | ||||||    
T  46731691 atttggcaagtgaac-aaaaactatcgaagtaatgaataaattt-gtatccacgaggaccgttgttaacttctactcagcaatttctttatcaaaaagga 46731594  T
Q  297 tgtagtaaa 305  Q
    |||| ||||    
T  46731593 tgtattaaa 46731585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 326
Target Start/End: Complemental strand, 35366562 - 35366486
Alignment:
Q  248 acgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaatttatgggttgctctaggcag 326  Q
    ||||||||||||||||| ||||||||||||| ||| ||| || |||||||||| ||||||| | |||||| ||||||||    
T  35366562 acgaggaccgttgttaacttctacttagcaatttcattataa-aaaggatgtattaaattt-taggttgccctaggcag 35366486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 4225621 - 4225681
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggac 255  Q
    |||||||||||||||||||| || ||||||||| ||||||||||| | ||||||| ||||||    
T  4225621 agatatttggcaagtgtacc-aatactatcgaagtagtaataaagattgtatccatgaggac 4225681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 251
Target Start/End: Complemental strand, 31549625 - 31549573
Alignment:
Q  200 ttggcaagtgtaccaaaaactatcgaattagtaata-aagttcgtatccacga 251  Q
    ||||||||||||||||||||||||||| || ||| | ||||||||||||||||    
T  31549625 ttggcaagtgtaccaaaaactatcgaagtaataaaataagttcgtatccacga 31549573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 5886751 - 5886794
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||    
T  5886751 agataattggcaagtgtaccaataactatcgaagtagtaataaa 5886794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 5896735 - 5896778
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||    
T  5896735 agataattggcaagtgtaccaataactatcgaagtagtaataaa 5896778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 6173117 - 6173160
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||    
T  6173117 agatagttggcaagtgtaccaataactatcgaagtagtaataaa 6173160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 548
Target Start/End: Complemental strand, 11271122 - 11271060
Alignment:
Q  485 aatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaa 548  Q
    |||||||||||||||||| || | ||||||||||||| ||||||||||| | ||||||| ||||    
T  11271122 aatagttttgatcaatct-ttaagtcaaaaccctttcctaagttataacctcttaatctcttaa 11271060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 16314357 - 16314400
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||    
T  16314357 agatatttggcaagtgtaccaataactatggaagtagtaataaa 16314400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 16414523 - 16414566
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||    
T  16414523 agatatttggcaagtgtaccaataactatggaagtagtaataaa 16414566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 18495351 - 18495394
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||    
T  18495351 agatatttggcaagtgtaccaataactatggaagtagtaataaa 18495394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 23374497 - 23374540
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||    
T  23374497 agataattggcaagtgtaccaataactatcgaaatagtaataaa 23374540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 326
Target Start/End: Complemental strand, 18551937 - 18551895
Alignment:
Q  284 ttaaaataaaggatgtagtaaatttatgggttgctctaggcag 326  Q
    ||||||| ||||||||  |||||||||||||||||||||||||    
T  18551937 ttaaaattaaggatgtgttaaatttatgggttgctctaggcag 18551895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 198 - 278
Target Start/End: Complemental strand, 13979722 - 13979643
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 278  Q
    |||||||||||| ||||||| |||||||| || |||  ||  ||| |||||||||||| | |||||||||||||| |||||    
T  13979722 atttggcaagtgaaccaaaa-ctatcgaagtaataaataaaatcgaatccacgaggactgctgttaatttctactcagcaa 13979643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 28327802 - 28327720
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 278  Q
    ||||| |||||||||||||||| |||||||||| |||||| |||  ||||  |||||||||| | |||||||||| | |||||||    
T  28327802 agataattggcaagtgtaccaataactatcgaagtagtaa-aaatatcgttcccacgaggactg-tgttaatttcaatttagcaa 28327720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 28331127 - 28331045
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 278  Q
    ||||| |||||||||||||||| |||||||||| |||||| |||  ||||  |||||||||| | |||||||||| | |||||||    
T  28331127 agataattggcaagtgtaccaataactatcgaagtagtaa-aaatatcgttcccacgaggactg-tgttaatttcaatttagcaa 28331045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 35366632 - 35366573
Alignment:
Q  202 ggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgtt 262  Q
    ||||||||||||||||   |||||| || || ||||| |||||||||||||||||||||||    
T  35366632 ggcaagtgtaccaaaata-atcgaagtaatattaaagatcgtatccacgaggaccgttgtt 35366573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 261; Significance: 1e-145; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 197 - 521
Target Start/End: Original strand, 1810197 - 1810521
Alignment:
Q  197 tatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagga 296  Q
    |||||| |||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1810197 tatttgacaagtgtaccaaaagctatcgaagtagtaataaagttcgtattcacgaggaccgttgttaatttctacttaacaagttcgttaaaataaagga 1810296  T
Q  297 tgtagtaaatttatgggttgctctaggcagctgaatttggtgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagataa 396  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1810297 tgtagtaaatttatgggttgccctaggcagctgaatttggtgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagataa 1810396  T
Q  397 tcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaactaaatagttttgat 496  Q
    ||||||||||||||||||||| |||| ||||||||||||||||  | |||||||| |||||||||||||||||| | |  ||||||||||||||||||||    
T  1810397 tcaagcctttgaatcctctatcgttcaccgtgaataatttgctccttttctatctcaatgttcacctaactctacgacggattaactaaatagttttgat 1810496  T
Q  497 caatctcttgactcaaaaccctttc 521  Q
    |||||||||||||||||||||||||    
T  1810497 caatctcttgactcaaaaccctttc 1810521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 194 - 571
Target Start/End: Original strand, 2499766 - 2500147
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2499766 agatatttggcaagtgtaccaaaagatatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 2499865  T
Q  294 ggatgtagtaaatttatgggttgctctaggcagctgaatttgg-tgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacag 392  Q
    |||||||||||||||||||||||| ||| |||| || |||||| |||||||||  | |||   | | || |||| |||||||  | ||  | ||||| ||    
T  2499866 ggatgtagtaaatttatgggttgccctaagcagttggatttggttgcataaaa-cttaatacaaagtaaataaaatggtttgataattggattaaaatag 2499964  T
Q  393 ataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaata 488  Q
    || |||||||||||  |||||||||||| || | |||| ||||||||   |||||| ||| || |   || |||||  |||| | || ||||||||| |     
T  2499965 atgatcaagcctttcaaatcctctattgctcacagtgagtaatttgcctctcttctctctcaaagaaattaacctaggtctacgacaaattaactaagtg 2500064  T
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||| ||||||||||||||||||||    
T  2500065 gttttgatcaatctcttgactcaaaaccctttcataagttataaccttttaatttcttaaactgattgaataaccgcggaagc 2500147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 194 - 326
Target Start/End: Complemental strand, 21680717 - 21680586
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21680717 agatatttggcaagtgtaccaaaa-ctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 21680619  T
Q  294 ggatgtagtaaatttatgggttgctctaggcag 326  Q
    ||||||| |||||||||||||||| ||||||||    
T  21680618 ggatgtactaaatttatgggttgccctaggcag 21680586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 196 - 571
Target Start/End: Original strand, 33320685 - 33321063
Alignment:
Q  196 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 295  Q
    |||||||||||||||||||||| |||||||| || |||||||||||||||||||  |||| | | | ||||||||||  ||||   ||||||||||||||    
T  33320685 atatttggcaagtgtaccaaaagctatcgaagtaataataaagttcgtatccacagggactgct-tcaatttctactcggcaaaagcgttaaaataaagg 33320783  T
Q  296 atgtagtaaatttatgggttgctctaggcagctgaatttggt-gcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagat 394  Q
    ||||| |||||||||||||  | ||||||| ||| ||||||| |||  ||| |||||| | | | || |||| |||||||  | ||  | ||||||  ||    
T  33320784 atgtattaaatttatgggtcaccctaggcaactggatttggttgcaataaaagtaaataaca-gaaaataaaatggtttgataattggattaaaactaat 33320882  T
Q  395 aatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagt 490  Q
     ||||||||||| ||||||||||||| ||   |||| ||||||||   |||||| ||| || |   || ||||| || || | |  ||||||||| | ||    
T  33320883 tatcaagcctttcgaatcctctattgctcattgtgagtaatttgcctctcttctctctcaaagaaattaacctagctttacgacggattaactaagtggt 33320982  T
Q  491 tttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  33320983 tttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagc 33321063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 194 - 317
Target Start/End: Complemental strand, 33921455 - 33921333
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    ||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  33921455 agatattcggcaagtgtaccaaaa-ctatcgaagtagtaataaagttcgtatccacgaggaccgttgtgaatttctacttagcaagttcgttaaaattaa 33921357  T
Q  294 ggatgtagtaaatttatgggttgc 317  Q
    ||||||| ||||||||||||||||    
T  33921356 ggatgtattaaatttatgggttgc 33921333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 198 - 571
Target Start/End: Complemental strand, 9691117 - 9690742
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 297  Q
    |||||||||||||||||||| | |||||| ||||||||||||||||||||||   ||  ||| | ||||||||||  ||||   ||||||||||||||||    
T  9691117 atttggcaagtgtaccaaaacc-atcgaagtagtaataaagttcgtatccacagagattgtt-tcaatttctactcggcaaaagcgttaaaataaaggat 9691020  T
Q  298 gtagtaaatttatgggttgctctaggcagctgaatttggt-gca-taaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagata 395  Q
    ||| |||||||||||||||| |||||||| |  || || | ||| ||||| |||||| | | | || |||| |||||||  | ||  | ||||||||||     
T  9691019 gtattaaatttatgggttgccctaggcagtttgatctgattgcaataaaaagtaaataaca-gaaaataaaatggtttgataattggattaaaacagatg 9690921  T
Q  396 atcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagtt 491  Q
    ||||||||||| ||||||||||||| || | |||| ||||||||   |||||| ||| ||     || ||||| || || | |  ||||||||| | |||    
T  9690920 atcaagcctttcgaatcctctattgctcactgtgagtaatttgcctttcttctctctcaaataaattaacctagct-tacgacggattaactaagtggtt 9690822  T
Q  492 ttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  9690821 ttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgtggaagc 9690742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 477 - 593
Target Start/End: Complemental strand, 26548167 - 26548051
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||  |||||||||||    
T  26548167 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaagttataaccttttaatctcttaaaccgattgaataaccatggaagcgataa 26548068  T
Q  577 cagaacatttattcatg 593  Q
     ||||| || |||||||    
T  26548067 aagaacgttaattcatg 26548051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 477 - 593
Target Start/End: Complemental strand, 26551726 - 26551610
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||  |||||||||||    
T  26551726 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaagttataaccttttaatctcttaaaccgattgaataaccatggaagcgataa 26551627  T
Q  577 cagaacatttattcatg 593  Q
     ||||| || |||||||    
T  26551626 aagaacgttaattcatg 26551610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 477 - 593
Target Start/End: Original strand, 28562404 - 28562520
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  28562404 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccacggaagcgataa 28562503  T
Q  577 cagaacatttattcatg 593  Q
     ||||| || |||||||    
T  28562504 aagaacgttaattcatg 28562520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 477 - 593
Target Start/End: Original strand, 28565972 - 28566088
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  28565972 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccacggaagcgataa 28566071  T
Q  577 cagaacatttattcatg 593  Q
     ||||| || |||||||    
T  28566072 aagaacgttaattcatg 28566088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 477 - 593
Target Start/End: Original strand, 40799961 - 40800077
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  40799961 attaactaagtagttttgatcaatctcttaactcaaaaccctttcctaagttataactttttaatctcttaaaccgattgaataaccgcggaagcgatag 40800060  T
Q  577 cagaacatttattcatg 593  Q
     ||||| || |||||||    
T  40800061 aagaacgttaattcatg 40800077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 19686243 - 19686128
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||      
T  19686243 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgatgt 19686144  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  19686143 cagaacgttaattcat 19686128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 477 - 592
Target Start/End: Original strand, 34652800 - 34652915
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||      
T  34652800 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataacattttaatctcttaaaccgattgaataaccgcggaagcgatgt 34652899  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  34652900 cagaacgttaattcat 34652915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 477 - 574
Target Start/End: Complemental strand, 2453356 - 2453259
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  2453356 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataactttttaatctcttaaaccgattgaataaccgtggaagcgat 2453259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 477 - 574
Target Start/End: Complemental strand, 3195167 - 3195070
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  3195167 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgat 3195070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 477 - 576
Target Start/End: Original strand, 4731876 - 4731975
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||| ||| ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  4731876 attaattaagtagttttgatcaatctcttgactcaaaactctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 4731975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 491 - 592
Target Start/End: Complemental strand, 17944710 - 17944609
Alignment:
Q  491 tttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttattc 590  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||| || ||||    
T  17944710 tttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgatgtcagaacgttaattc 17944611  T
Q  591 at 592  Q
    ||    
T  17944610 at 17944609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 19689626 - 19689511
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||| |||||||||||||||||||  |||||||||      
T  19689626 attaactaattagttttgatcaatctcttgactcaaaaccctttactaagttataaccttttaatctcttaaaccgattgaataaccatggaagcgatgt 19689527  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  19689526 cagaacgttaattcat 19689511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 282 - 570
Target Start/End: Complemental strand, 26338256 - 26337963
Alignment:
Q  282 cgttaaaataaaggatgtagtaaatttatgggttgctctaggcagctgaatttggt-gca-taaaatgtaaatgagatgcaattaaattggtttggaatt 379  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||| || ||||||| ||| ||||| |||||| | | | || |||| |||||||  | |    
T  26338256 cgttagaataaaggatgtattaaatttatgggttgccctaggcagttggatttggttgcaataaaaagtaaataaca-gaaaataaaatggtttgataat 26338158  T
Q  380 tataataaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgt---tcacctaactctatggca 475  Q
    |  | |||||||||| ||||||||||| ||||||||||||| || | |||| ||||||||   |||| | ||| || |    | |||||  | || | |     
T  26338157 tggattaaaacagatgatcaagcctttcgaatcctctattgctcactgtgagtaatttgcctctcttatctctcaaagaaaataacctaggtttacgacg 26338058  T
Q  476 tattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaag 570  Q
     ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||| |||||    
T  26338057 gattaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaagccgattgaataaccgtggaag 26337963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 194 - 310
Target Start/End: Complemental strand, 34406090 - 34405975
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||  |||| ||| |||  | |||    
T  34406090 agatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggaccgttgttaatttctactcggcaatttctttatcaaaaa 34405991  T
Q  294 ggatgtagtaaatttat 310  Q
    ||||||| |||||||||    
T  34405990 ggatgta-taaatttat 34405975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 385 - 561
Target Start/End: Original strand, 35432442 - 35432619
Alignment:
Q  385 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaact 483  Q
    |||||||||| ||||||||||| ||||| ||||||| || ||||||||||||||||  ||||   ||| ||||| ||||||||| || | |  |||||||    
T  35432442 taaaacagatgatcaagcctttcgaatcatctattgctcaccgtgaataatttgctcctctttgctctcaatgtccacctaactttacgacggattaact 35432541  T
Q  484 aaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataa 561  Q
     | |||||||||||||||||||||||||||| ||||||  | |||||||| | ||||||| ||||| |||||||||||    
T  35432542 tattagttttgatcaatctcttgactcaaaatcctttccaaggttataacctcttaatctcttaaatcgattgaataa 35432619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 198 - 533
Target Start/End: Complemental strand, 36331074 - 36330741
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 297  Q
    ||||| |||||||||| ||  |||||||| || ||||||| || | ||||||||||||||||||||||||||||| | ||| || |||||  ||||||||    
T  36331074 atttgacaagtgtacctaat-ctatcgaagtaataataaaatttgcatccacgaggaccgttgttaatttctactcaacaattttgttaacttaaaggat 36330976  T
Q  298 gtagtaaatttatgggttgctctaggcagctgaatttggtgcataaaatgtaaatgaga-tgcaattaaattggtttggaatttataataaaacagataa 396  Q
     |  ||||||    |||||| |||||||| || ||  | ||||| |||  |  || | |  | ||||||||||||||| || ||| | |||||||||| |    
T  36330975 atgttaaattgggtggttgcactaggcagttggatcggttgcattaaactt--attacacggtaattaaattggtttgaaaattagattaaaacagatga 36330878  T
Q  397 tcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaactaaatagttttgat 496  Q
     ||| | || ||||||||| |||  | | ||||||||||||||  |||||| ||| ||||||||||||||| || | |  ||||||  ||||||||||||    
T  36330877 acaaactttcgaatcctctgttgcgcactgtgaataatttgctcctcttctctctcaatgttcacctaactttacgacggattaacctaatagttttgat 36330778  T
Q  497 caatctcttgactcaaaaccctttcttaagttataac 533  Q
    |||||| ||||||||||||  |||| |||||||||||    
T  36330777 caatcttttgactcaaaactatttcctaagttataac 36330741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 489 - 592
Target Start/End: Complemental strand, 26727007 - 26726904
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 588  Q
    ||||| ||||||||||||| ||||||| || || ||||||||||| ||||||||| |||||||||||||||||  ||||||||||||| ||||| || ||    
T  26727007 gttttaatcaatctcttgaatcaaaactctgtcctaagttataaccttttaatctcttaaaccgattgaataattgcggaagcgataaaagaacgttaat 26726908  T
Q  589 tcat 592  Q
    ||||    
T  26726907 tcat 26726904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 505 - 592
Target Start/End: Complemental strand, 25185432 - 25185345
Alignment:
Q  505 tgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttattcat 592  Q
    ||||||||||||||||| ||||||||||| ||||||||| ||||| ||| ||||||| ||||||||||| |||||||| || ||||||    
T  25185432 tgactcaaaaccctttcctaagttataaccttttaatctcttaaatcgaatgaataatcgcggaagcgacaacagaacgttaattcat 25185345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 360 - 532
Target Start/End: Original strand, 36335037 - 36335210
Alignment:
Q  360 aattaaattggtttggaatttataataaaa-cagataatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgtt 458  Q
    ||||||||||||||| || ||| | ||||| ||||| |||||||||| |||||||| | ||| |   ||||||||||| ||  |||||| ||| ||||||    
T  36335037 aattaaattggtttgaaaattagattaaaaacagatgatcaagccttcgaatcctcaagtgtgcattgtgaataattttctcatcttctctctcaatgtt 36335136  T
Q  459 cacctaactctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 532  Q
    |||||| || || |     |||||  |||||||||||| |||||||||||||||||||||||| ||||||||||    
T  36335137 cacctagctttacgatgatttaacctaatagttttgataaatctcttgactcaaaaccctttcctaagttataa 36335210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 14616437 - 14616510
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact 272  Q
    |||||||||||| ||||||| |||||||| || |||  || ||||||||||||||||||||||||||||||||||    
T  14616437 atttggcaagtgaaccaaaa-ctatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctact 14616510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 310
Target Start/End: Original strand, 7649950 - 7650060
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 297  Q
    ||||| |||||| ||||||| |||||||| || |||  || ||||||| |||||||||||||||||||||||||| | ||| ||| |||  | |||||||    
T  7649950 atttgacaagtgaaccaaaa-ctatcgaagtaataaataaattcgtattcacgaggaccgttgttaatttctactcaacaatttctttatcaaaaaggat 7650048  T
Q  298 gtagtaaatttat 310  Q
    ||| |||||||||    
T  7650049 gta-taaatttat 7650060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 26727295 - 26727252
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  26727295 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 26727252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 477 - 521
Target Start/End: Complemental strand, 20077697 - 20077653
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttc 521  Q
    |||||| |||||||||||||||||||||||| |||||||| ||||    
T  20077697 attaacaaaatagttttgatcaatctcttgaatcaaaaccttttc 20077653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 325
Target Start/End: Original strand, 35432330 - 35432373
Alignment:
Q  282 cgttaaaataaaggatgtagtaaatttatgggttgctctaggca 325  Q
    |||||||||||| |||||| |||||||||||||||| |||||||    
T  35432330 cgttaaaataaatgatgtattaaatttatgggttgccctaggca 35432373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 20056193 - 20056160
Alignment:
Q  200 ttggcaagtgtaccaaaaactatcgaattagtaa 233  Q
    ||||||||||||||||||||||||||| ||||||    
T  20056193 ttggcaagtgtaccaaaaactatcgaagtagtaa 20056160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 552 - 592
Target Start/End: Original strand, 1810528 - 1810568
Alignment:
Q  552 gattgaataaccgcggaagcgataacagaacatttattcat 592  Q
    ||||||||||||||||||||||||||| ||| || ||||||    
T  1810528 gattgaataaccgcggaagcgataacaaaacgttaattcat 1810568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 310
Target Start/End: Original strand, 15532204 - 15532318
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||| ||| ||||||  | |||||| || ||| ||| ||||| ||||||||||| ||  |||| ||||||||||||| ||| |||  | |||    
T  15532204 agatatttggcatgtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaa 15532302  T
Q  294 ggatgtagtaaatttat 310  Q
    ||||||| |||||||||    
T  15532303 ggatgta-taaatttat 15532318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 310
Target Start/End: Original strand, 15542386 - 15542500
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||| ||||||  | |||||| || ||| ||| ||||| ||||||||||| ||  |||| ||||||||| ||| ||| |||  | |||    
T  15542386 agatatttggcaagtgaaccaaattcgatcgaagtaataa-aaaattcgtttccacgaggactgtatttaacttctacttaacaatttcattattaaaaa 15542484  T
Q  294 ggatgtagtaaatttat 310  Q
    ||||||| |||||||||    
T  15542485 ggatgta-taaatttat 15542500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 19686506 - 19686443
Alignment:
Q  215 aaaactatcgaattagtaata-aagttcgtatccacgaggaccgttgttaatttctacttagcaa 278  Q
    |||||||||||| |||||| | |||||||||||||||||||| | ||||||| || |||||||||    
T  19686506 aaaactatcgaagtagtaaaataagttcgtatccacgaggactg-tgttaatctcaacttagcaa 19686443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 2e-81; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 197 - 571
Target Start/End: Complemental strand, 6964644 - 6964266
Alignment:
Q  197 tatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagga 296  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6964644 tatttggtaagtgtaccaaaaactatcgaagtagtaatgaagttcgtatccacgagggccgttgttaatttctacttagcaagttcgttaaaataaagga 6964545  T
Q  297 tgtagtaaatttatgggttgctctaggcagctgaatttggt-gcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagata 395  Q
    ||||||||||||||||||||| ||||| || || ||||||| ||||||||  | |||   | | || |||| |||||||  | ||  | ||||||||||     
T  6964544 tgtagtaaatttatgggttgccctaggtagttggatttggtcgcataaaa-cttaatacaaagtaaataaaatggtttgataattggattaaaacagatg 6964446  T
Q  396 atcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagtt 491  Q
    ||||||||||| ||||||||||||| || | |||| ||||||||   |||||| ||| || |   || ||||| || || | || | ||||||| | |||    
T  6964445 atcaagcctttcgaatcctctattgctcacagtgagtaatttgcctctcttctctctcaaagaaattaacctagctttacgacaaaataactaagtggtt 6964346  T
Q  492 ttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  6964345 ttgatcaatctcttgactcaaaatcctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagc 6964266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 194 - 565
Target Start/End: Complemental strand, 38431753 - 38431378
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  38431753 agatatttggaaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccatgaggaccgttgttaatttctacttagcaagttagttaaaataaa 38431654  T
Q  294 ggatgtagtaaatttatgggttgctctaggcagctgaatttgg-tgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacag 392  Q
    |||||||||||||||||||||||| |||||||| || |||||| |||||||||  | |||   | | || |||| |||||||  | ||| | ||||||||    
T  38431653 ggatgtagtaaatttatgggttgccctaggcagttggatttggttgcataaaa-cttaatataaagtaaataaaatggtttgataattagattaaaacag 38431555  T
Q  393 ataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaata 488  Q
    || ||||||||||| ||||||||||||| || | |||  |||||| |   |||||| ||| || |   || ||||| || || | || ||||||||| |     
T  38431554 atgatcaagcctttcgaatcctctattgctcacagtgggtaattttcctctcttctctctcaaagaaattaacctagctttacgacaaattaactaagtg 38431455  T
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgc 565  Q
    |||||||||||||||||||||||||||| |||| | ||||||||| ||||||||| |||||||||||||||||||||    
T  38431454 gttttgatcaatctcttgactcaaaaccatttcctcagttataaccttttaatctcttaaaccgattgaataaccgc 38431378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 196 - 571
Target Start/End: Original strand, 3540930 - 3541307
Alignment:
Q  196 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 295  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  3540930 atatttggcaagtgtaccaaaa-ctatcaaagtagtaataaagttcgtatccacgaggaccgttgtgaacttctacttagcaagttcgttaaaataaagg 3541028  T
Q  296 atgtagtaaatttatgggttgctctaggcagctgaatttgg-tgc-ataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacaga 393  Q
    ||||| | |||||||||||||| ||| |||| || |||||| ||| |||||| |||||| | |   || |||| |||||||  | ||  | ||||| |||    
T  3541029 atgta-ttaatttatgggttgccctaagcagttggatttggttgcaataaaaagtaaataaca-aaaaataaaatggtttgataattggattaaaataga 3541126  T
Q  394 taatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagt 490  Q
    | ||||||| || ||||||||||||| ||   |||| ||||||||   |||||| ||| || |   || ||||| || || | |  |||||| || | ||    
T  3541127 tgatcaagctttcgaatcctctattgctcattgtgagtaatttgcctctcttctctctcaaagaaattaacctagctttacgacggattaaccaagtggt 3541226  T
Q  491 tttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| | |||| ||||||||||||| ||||||    
T  3541227 tttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctctgaaactgattgaataaccgtggaagc 3541307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 198 - 592
Target Start/End: Complemental strand, 16547359 - 16546961
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 297  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||  ||| | ||||||||||  ||||   ||||||||||||||||    
T  16547359 atttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggattgtt-tcaatttctactcggcaaaagcgttaaaataaaggat 16547261  T
Q  298 gtagtaaatttatgggttgctctaggcagctgaatttggt-gca-taaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagata 395  Q
    ||| |||||||| ||||||| |||||||| || ||||||| ||| ||||| |||||| | |   ||  |||| ||||||  | ||  | ||||| | ||     
T  16547260 gtattaaatttaagggttgccctaggcagttggatttggttgcaataaaaagtaaataacagagaacaaaat-ggtttgacaattggactaaaaaaaatg 16547162  T
Q  396 atcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagtt 491  Q
    ||||||||||| ||||||||||||| || | ||||  |||||||   |||||| ||  || |   || ||||| || || | |  ||||||||| |||||    
T  16547161 atcaagcctttcgaatcctctattgctcactgtgaggaatttgcctctcttctctcacaaagaaattaacctagctttacgacggattaactaagtagtt 16547062  T
Q  492 ttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttattca 591  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||| |||||| ||  |||||| || |||||    
T  16547061 ttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaactgattgaataaccgtggaagctatgtcagaacgttaattca 16546962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 198 - 592
Target Start/End: Original strand, 16618303 - 16618701
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 297  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||  ||| | ||||||||||  ||||   ||||||||||||||||    
T  16618303 atttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggattgtt-tcaatttctactcggcaaaagcgttaaaataaaggat 16618401  T
Q  298 gtagtaaatttatgggttgctctaggcagctgaatttggt-gca-taaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagata 395  Q
    ||| |||||||| ||||||| |||||||| || ||||||| ||| ||||| |||||| | |   ||  |||| ||||||  | ||  | ||||| | ||     
T  16618402 gtattaaatttaagggttgccctaggcagttggatttggttgcaataaaaagtaaataacagagaacaaaat-ggtttgacaattggactaaaaaaaatg 16618500  T
Q  396 atcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagtt 491  Q
    ||||||||||| ||||||||||||| || | ||||  |||||||   |||||| ||  || |   || ||||| || || | |  ||||||||| |||||    
T  16618501 atcaagcctttcgaatcctctattgctcactgtgaggaatttgcctctcttctctcacaaagaaattaacctagctttacgacggattaactaagtagtt 16618600  T
Q  492 ttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttattca 591  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||| |||||| ||  |||||| || |||||    
T  16618601 ttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaactgattgaataaccgtggaagctatgtcagaacgttaattca 16618700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 477 - 594
Target Start/End: Complemental strand, 2349532 - 2349415
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2349532 attaactaagtagttttgatcaatctctcgactcaaaaccctttcctaagttataactttttaatctcttaaaccgattgaataaccgcggaagcgataa 2349433  T
Q  577 cagaacatttattcatgt 594  Q
     ||||| || ||||||||    
T  2349432 aagaacgttaattcatgt 2349415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 477 - 594
Target Start/End: Original strand, 22232672 - 22232789
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  22232672 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 22232771  T
Q  577 cagaacatttattcatgt 594  Q
     || || || ||||||||    
T  22232772 aagtacgttaattcatgt 22232789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 477 - 594
Target Start/End: Complemental strand, 22254067 - 22253950
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  22254067 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 22253968  T
Q  577 cagaacatttattcatgt 594  Q
     || || || ||||||||    
T  22253967 aagtacgttaattcatgt 22253950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 477 - 594
Target Start/End: Complemental strand, 22257331 - 22257214
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  22257331 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 22257232  T
Q  577 cagaacatttattcatgt 594  Q
     || || || ||||||||    
T  22257231 aagtacgttaattcatgt 22257214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 477 - 593
Target Start/End: Original strand, 11825400 - 11825516
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11825400 attaactaagtagatttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatcttttaaaccgattgaataaccgcggaagcgataa 11825499  T
Q  577 cagaacatttattcatg 593  Q
     ||||| || |||||||    
T  11825500 aagaacgttaattcatg 11825516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 477 - 594
Target Start/End: Original strand, 748086 - 748203
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  748086 attaactaagtagttttgatcaatctcctgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 748185  T
Q  577 cagaacatttattcatgt 594  Q
     ||||| || ||||||||    
T  748186 aagaacgttaattcatgt 748203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 477 - 594
Target Start/End: Original strand, 8257632 - 8257749
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  8257632 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcaataa 8257731  T
Q  577 cagaacatttattcatgt 594  Q
    |||||||||  |||||||    
T  8257732 cagaacattatttcatgt 8257749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 477 - 594
Target Start/End: Complemental strand, 20100717 - 20100600
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  20100717 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 20100618  T
Q  577 cagaacatttattcatgt 594  Q
     || || || ||||||||    
T  20100617 aagtacgttaattcatgt 20100600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 8257961 - 8257846
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||      
T  8257961 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcagaagcgatgt 8257862  T
Q  577 cagaacatttattcat 592  Q
    ||||||||| ||||||    
T  8257861 cagaacattaattcat 8257846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 477 - 593
Target Start/End: Complemental strand, 8397918 - 8397802
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  8397918 attaactaagtagatttgatcaatctcttgactcaaaaccctttcctaagctataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 8397819  T
Q  577 cagaacatttattcatg 593  Q
     ||||| || |||||||    
T  8397818 aagaacgttaattcatg 8397802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 477 - 592
Target Start/End: Original strand, 23467213 - 23467328
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||| |||||||      
T  23467213 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcgaaagcgatgt 23467312  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  23467313 cagaaccttaattcat 23467328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 477 - 593
Target Start/End: Original strand, 5826753 - 5826869
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||| ||||||||||    
T  5826753 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataaccgcagaagcgataa 5826852  T
Q  577 cagaacatttattcatg 593  Q
     || || || |||||||    
T  5826853 aagtacgttaattcatg 5826869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 477 - 571
Target Start/End: Complemental strand, 43549266 - 43549172
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  43549266 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataacattttaatctcttaaaccgattgaataaccgcggaagc 43549172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 194 - 310
Target Start/End: Complemental strand, 6967389 - 6967274
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| ||| |||  | |||    
T  6967389 agatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaa 6967290  T
Q  294 ggatgtagtaaatttat 310  Q
    ||||||| |||||||||    
T  6967289 ggatgta-taaatttat 6967274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 194 - 310
Target Start/End: Original strand, 17866357 - 17866472
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| ||| |||  | |||    
T  17866357 agatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaa 17866456  T
Q  294 ggatgtagtaaatttat 310  Q
    ||||||| |||||||||    
T  17866457 ggatgta-taaatttat 17866472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 489 - 592
Target Start/End: Complemental strand, 2251932 - 2251829
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 588  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||| || ||    
T  2251932 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaacgttaat 2251833  T
Q  589 tcat 592  Q
    ||||    
T  2251832 tcat 2251829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 489 - 592
Target Start/End: Original strand, 23598820 - 23598923
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 588  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||| || ||    
T  23598820 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaacgttaat 23598919  T
Q  589 tcat 592  Q
    ||||    
T  23598920 tcat 23598923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 17857884 - 17857962
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact 272  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17857884 agatatttggcaagtgtaccaaaagctatcgaaatagtaataaagttcgtatccacgaggaccgttgttaatttctact 17857962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 26182375 - 26182260
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    |||||| || ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||| || ||||||||||    
T  26182375 attaacaaattagttttgatcaatctcttgagtcaaaaccctttcctaagttataaccttttaatctcttaaactgattgaataactgcagaagcgataa 26182276  T
Q  577 cagaacatttattcat 592  Q
     ||||| || ||||||    
T  26182275 aagaacgttaattcat 26182260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 489 - 576
Target Start/End: Complemental strand, 26460526 - 26460439
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  26460526 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataa 26460439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 491 - 592
Target Start/End: Original strand, 22083502 - 22083603
Alignment:
Q  491 tttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttattc 590  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| | |||||||||||||||||||||||  |||||| || ||||    
T  22083502 tttgatcaatctcttgactcaaaaccctttcctaagttataacattttaatctcttaagcagattgaataaccgcggaagcgatgtcagaacgttaattc 22083601  T
Q  591 at 592  Q
    ||    
T  22083602 at 22083603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 489 - 571
Target Start/End: Original strand, 710074 - 710156
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  710074 gttttgatcaatctcttgaatcaaaaccttttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagc 710156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 477 - 571
Target Start/End: Original strand, 44017837 - 44017931
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| ||| ||||||| ||||||||| ||||||||||||||||| |||||||||    
T  44017837 attaactaagtggttttgatcaatctcttgacacaaaaccctttcctaaattataaccttttaatctcttaaaccgattgaataatcgcggaagc 44017931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 363 - 570
Target Start/End: Complemental strand, 26153342 - 26153131
Alignment:
Q  363 taaattggtttggaatttataataaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---tt 458  Q
    |||| ||||||| || ||| | |||||||||| ||||||||||| |||| |||||||| || |||||| ||||||||   |||||| ||| || |   ||    
T  26153342 taaaatggtttgaaaattagattaaaacagatgatcaagccttttgaattctctattgctcaccgtgagtaatttgcctctcttctctctcaaagaaatt 26153243  T
Q  459 cacctaactctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaa 558  Q
     ||||| || || | |  ||||||||| | |||||||| |||||||||||||||||||||||| ||||| ||||| ||||||||| |||||| |||||||    
T  26153242 aacctagctttacgacggattaactaagtggttttgattaatctcttgactcaaaaccctttcctaagtcataaccttttaatctcttaaactgattgaa 26153143  T
Q  559 taaccgcggaag 570  Q
    |||| |||||||    
T  26153142 taactgcggaag 26153131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 198 - 337
Target Start/End: Complemental strand, 17152310 - 17152173
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 297  Q
    ||||| |||||||||||||| |||||||| ||||||||||||| ||||||||   ||| ||| | ||||||||||  ||||   ||||||||||||||||    
T  17152310 atttgacaagtgtaccaaaa-ctatcgaagtagtaataaagtttgtatccacagagactgtt-tcaatttctactcggcaaaagcgttaaaataaaggat 17152213  T
Q  298 gtagtaaatttatgggttgctctaggcagctgaatttggt 337  Q
    ||| |||||||||||||||| |||||||| || |||||||    
T  17152212 gtattaaatttatgggttgccctaggcagttggatttggt 17152173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 396 - 574
Target Start/End: Original strand, 26808694 - 26808871
Alignment:
Q  396 atcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaactaaatagttttga 495  Q
    |||||||||| ||||||||||||| || ||||| ||||||||||  ||||   ||  ||||||||||||||| || | |  ||||||| | |||||||||    
T  26808694 atcaagccttcgaatcctctattgctcaccgtgcataatttgctcctctttgctcccaatgttcacctaactttacgacggattaacttattagttttga 26808793  T
Q  496 tcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    ||||||| ||||||||||| |||||  || |||||||| | ||||||| || ||  ||||||||||| | |||||||||    
T  26808794 tcaatcttttgactcaaaatccttttctaggttataacctcttaatctctt-aagtgattgaataactgtggaagcgat 26808871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 477 - 555
Target Start/End: Complemental strand, 42606356 - 42606279
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgatt 555  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| || ||||||||| ||||| |||||    
T  42606356 attaactaagtagttttgatcaatctcttgactcaaaaccctttcttaaattat-accttttaatctcttaaatcgatt 42606279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 477 - 562
Target Start/End: Original strand, 6214420 - 6214505
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataac 562  Q
    ||||||| | ||| |||||||||||||||||||||||  |||||| || |||||||| ||||||||| ||||||||||||||||||    
T  6214420 attaacttattagctttgatcaatctcttgactcaaagtcctttcctaggttataaccttttaatctcttaaaccgattgaataac 6214505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 481 - 563
Target Start/End: Complemental strand, 23775950 - 23775868
Alignment:
Q  481 actaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataacc 563  Q
    ||||| || |||| ||| |||||||||| |||||| ||||| |||||||||||  |||||||| ||||||| |||||||||||    
T  23775950 actaattaattttcatctatctcttgacacaaaactctttcctaagttataacaatttaatctcttaaaccaattgaataacc 23775868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 709787 - 709847
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggac 255  Q
    |||||||||||||||||||||| |||||||||| ||||||||||  |||| |||||||||||    
T  709787 agatatttggcaagtgtaccaataactatcgaagtagtaataaatatcgt-tccacgaggac 709847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 199 - 312
Target Start/End: Original strand, 28577687 - 28577798
Alignment:
Q  199 tttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatg 298  Q
    ||||||||||||||||||| ||||||||  | |||| || ||| |||| ||||||||||||||||| ||||||| |  || ||| |||| ||||| ||||    
T  28577687 tttggcaagtgtaccaaaa-ctatcgaagcaataatcaaattcatatctacgaggaccgttgttaacttctactcaataatttcattaacataaa-gatg 28577784  T
Q  299 tagtaaatttatgg 312  Q
    || |||||||||||    
T  28577785 tattaaatttatgg 28577798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 286
Target Start/End: Original strand, 36842945 - 36843032
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgtta 286  Q
    |||||||||||| |||||||  ||||||| || |||  ||| ||| |||||| |||||||||||||||||||||| ||||| |||||||    
T  36842945 atttggcaagtgaaccaaaat-tatcgaagtaataaataagatcgaatccacaaggaccgttgttaatttctactcagcaatttcgtta 36843032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 2252220 - 2252177
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  2252220 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 2252177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 23598532 - 23598575
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  23598532 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 23598575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 272
Target Start/End: Complemental strand, 24783646 - 24783573
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact 272  Q
    ||||| |||||| ||||||| |||||||| || |||  || || |||||||||||||||||||||||||||||||    
T  24783646 atttgacaagtgaaccaaaa-ctatcgaagtaataaataaatttgtatccacgaggaccgttgttaatttctact 24783573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 239 - 312
Target Start/End: Complemental strand, 17601950 - 17601877
Alignment:
Q  239 ttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaatttatgg 312  Q
    ||||||||||| |||||  ||||||||||||| | | ||| || |||||| ||||||||||| |||||||||||    
T  17601950 ttcgtatccacaaggactattgttaatttctaatcatcaattttgttaaactaaaggatgtattaaatttatgg 17601877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 428 - 532
Target Start/End: Original strand, 28577913 - 28578017
Alignment:
Q  428 gaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagt 527  Q
    |||||||||||   |||||| ||| || ||| ||||| || |||| |  ||||||  ||||||||||||||||||||||| ||||||| ||||| || ||    
T  28577913 gaataatttgcccctcttctctctcaaagttaacctagctttatgacggattaacctaatagttttgatcaatctcttgagtcaaaactctttcctaggt 28578012  T
Q  528 tataa 532  Q
    |||||    
T  28578013 tataa 28578017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 310
Target Start/End: Complemental strand, 295101 - 294987
Alignment:
Q  195 gatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaag 294  Q
    ||||||||||||||| ||||||  | |||||| || ||| ||| || || ||||||||||| ||  |||| ||||||||||||| ||| |||  | ||||    
T  295101 gatatttggcaagtgaaccaaattcaatcgaagtaataaaaaattt-gtgtccacgaggactgtatttaacttctacttagcaatttcattattaaaaag 295003  T
Q  295 gatgtagtaaatttat 310  Q
    |||||| |||||||||    
T  295002 gatgtaataaatttat 294987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 237
Target Start/End: Complemental strand, 20100989 - 20100950
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  20100989 atttggcaagtgtaccaataactatcgaagtagtaataaa 20100950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 485 - 532
Target Start/End: Complemental strand, 42859054 - 42859008
Alignment:
Q  485 aatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 532  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||||||    
T  42859054 aatagttttgatcaatctcttgagtcaaaa-cctttcctaagttataa 42859008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 515
Target Start/End: Original strand, 30058196 - 30058234
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaac 515  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  30058196 attaacaaaatagttttgatcaatcccttgactcaaaac 30058234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 487 - 548
Target Start/End: Complemental strand, 17601747 - 17601686
Alignment:
Q  487 tagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaa 548  Q
    ||||||||||||||||| | | ||||||||| ||| ||||||||||| | ||||||| ||||    
T  17601747 tagttttgatcaatctcctaagtcaaaacccgttcctaagttataacctcttaatctcttaa 17601686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 26460808 - 26460771
Alignment:
Q  200 ttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  26460808 ttggcaagtgtaccaataactatcgaagtagtaataaa 26460771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 326
Target Start/End: Complemental strand, 9766042 - 9765912
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||  ||||||| |||||||| || |||  ||| ||| |||||  ||| |||||||||||||||||| ||||  ||| |||    |||    
T  9766042 agatatttggcaagttaaccaaaa-ctatcgaagtaataaataagatcgaatccataagggccgttgttaatttctactcagcattttctttatcgaaaa 9765944  T
Q  294 ggatgtagtaaatttatgggttgctctaggcag 326  Q
    ||||||| ||||||| | |||||| ||||||||    
T  9765943 ggatgtattaaatttct-ggttgccctaggcag 9765912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 23759613 - 23759696
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 278  Q
    |||||||||||||||| ||||||  | |||||| || ||| ||||||||| || |||||||| ||  |||| |||||||||||||    
T  23759613 agatatttggcaagtgaaccaaattcaatcgaagtaataa-aaagttcgtttctacgaggactgtatttaacttctacttagcaa 23759696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 1e-76; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 194 - 569
Target Start/End: Original strand, 34552442 - 34552821
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34552442 agatatttgacaagtgtaccaaaa-ctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagtttgttaaaataaa 34552540  T
Q  294 ggatgtagtaaa-tttat-gggttgctctaggcagctgaatttgg-tgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaac 390  Q
    |||||||||||| ||||| ||||||| |||||||| || |||||| |  |||||| |||||    | | || |||| |||||||  | ||  | |||| |    
T  34552541 ggatgtagtaaattttatggggttgccctaggcagttggatttggttttataaaacgtaaa--caaagtaaataaaatggtttgataattggattaaagc 34552638  T
Q  391 agataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaa 486  Q
    |||| ||||||||||| ||||||||||||| || |||||| ||||||||   |||||| |||||| |   || ||||| || || | || |||||||||     
T  34552639 agatgatcaagcctttcgaatcctctattgctcaccgtgagtaatttgcctctcttctctcttaaagaaattaacctagctttacgacaaattaactaag 34552738  T
Q  487 tagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaa 569  Q
    | |||||||||||||||||||||||||||||||||  |||||||||| ||||||||| |||||||||||||||||||||||||    
T  34552739 tggttttgatcaatctcttgactcaaaaccctttccaaagttataaccttttaatctcttaaaccgattgaataaccgcggaa 34552821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 200 - 571
Target Start/End: Complemental strand, 18392747 - 18392372
Alignment:
Q  200 ttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgt 299  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  18392747 ttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagtttgttaaaataaaggatct 18392648  T
Q  300 agtaaa-tttat-gggttgctctaggcagctgaatttgg-tgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagataa 396  Q
    |||||| ||||| ||||||| |||| ||| || |||||| |  |||||| |||||    | | || |||| |||||||  | ||  | |||||||||| |    
T  18392647 agtaaattttatggggttgccctagccagttggatttggttttataaaacgtaaa--caaagtaaataaaatggtttgataattggattaaaacagatga 18392550  T
Q  397 tcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagttt 492  Q
    |||||||||| ||||||||||||| || || ||| ||||||||   |||||| ||| || |   || ||||| || || | || ||||||||| | ||||    
T  18392549 tcaagcctttcgaatcctctattgctcaccatgagtaatttgcctatcttctctctcaaagaaattaacctagctttacgacaaattaactaagtggttt 18392450  T
Q  493 tgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||| || |||||||||||||||||||||||||||    
T  18392449 tgatcaatctcttgactcaaaaccctttcctaagttataaccttttaa-ctcttaaaccgattgaataaccgcggaagc 18392372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 196 - 571
Target Start/End: Complemental strand, 6206239 - 6205859
Alignment:
Q  196 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 295  Q
    |||||| |||||||||| ||||  ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  6206239 atatttagcaagtgtactaaaat-tatcgaagtagtaataaagttcgtatccacgagaaccgttgttaatttctacttaacaagttcgttaaaataaagg 6206141  T
Q  296 atgtagtaaattt--atgggttgctctaggcagctgaatttgg-tgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacag 392  Q
    |||||||||||||    ||||||| ||||| || |  |||||| |  |||||| |||||    | | || |||| |||||||  | ||  | ||||||||    
T  6206140 atgtagtaaatttgacagggttgccctaggtagttcgatttggttttataaaacgtaaa--caaagtaaataaaatggtttgataattggattaaaacag 6206043  T
Q  393 ataatcaagcc-tttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaata 488  Q
    || |||||||| |||||||||||||||| || |||||| |||||||    |||||| ||| || |   || ||||| || || | || ||||||||| |     
T  6206042 atgatcaagccttttgaatcctctattgctcaccgtgagtaatttggctctcttctctctcaaagaaattaacctagctttacgacaaattaactaagtg 6205943  T
Q  489 gttttgatcaatctcttgactc-aaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
     ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6205942 attttgatcaatctcttgactcaaaaaccctttcctaagttataactttttaatctcttaaaccgattgaataaccgcggaagc 6205859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 194 - 335
Target Start/End: Complemental strand, 49716731 - 49716589
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    ||||| ||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49716731 agataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 49716632  T
Q  294 ggatgtagtaaa-tttatgggttgctctaggcagctgaatttg 335  Q
    |||||||||||| |||||||||||| |||||||| || |||||    
T  49716631 ggatgtagtaaattttatgggttgccctaggcagttggatttg 49716589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 194 - 323
Target Start/End: Complemental strand, 49720213 - 49720083
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    ||||| ||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49720213 agataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 49720114  T
Q  294 ggatgtagtaaa-tttatgggttgctctagg 323  Q
    || ||||||||| |||||||||||| |||||    
T  49720113 gggtgtagtaaattttatgggttgccctagg 49720083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 477 - 573
Target Start/End: Original strand, 17902833 - 17902929
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcga 573  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  17902833 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcga 17902929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 477 - 574
Target Start/End: Complemental strand, 49716446 - 49716349
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  49716446 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataaccgcggaagcgat 49716349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 477 - 574
Target Start/End: Complemental strand, 49719928 - 49719831
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  49719928 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataaccgcggaagcgat 49719831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 477 - 593
Target Start/End: Complemental strand, 28918448 - 28918332
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||||||| |||||     
T  28918448 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataaccgcggaaacgatac 28918349  T
Q  577 cagaacatttattcatg 593  Q
     ||||| || |||||||    
T  28918348 aagaacgttaattcatg 28918332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 477 - 593
Target Start/End: Complemental strand, 37641941 - 37641825
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| || |||||||| || |||||| ||||||||||||||||||||||||||||||||    
T  37641941 attaactaagtagatttgatcaatctcttgactcaaaaccctttcctaggttataaccttgtaatctcttaaaccgattgaataaccgcggaagcgataa 37641842  T
Q  577 cagaacatttattcatg 593  Q
     ||||| || |||||||    
T  37641841 aagaacgttaattcatg 37641825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 20981433 - 20981318
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||| |||||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| |||     
T  20981433 attaactaagtagttttgatcaatctcttgaatcaaaatcctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcaatat 20981334  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  20981333 cagaacgttaattcat 20981318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 477 - 571
Target Start/End: Original strand, 50197004 - 50197098
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  50197004 attaactaaatggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgtggaagc 50197098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 194 - 310
Target Start/End: Complemental strand, 10765161 - 10765046
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| ||| |||  | |||    
T  10765161 agatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaa 10765062  T
Q  294 ggatgtagtaaatttat 310  Q
    ||||||| |||||||||    
T  10765061 ggatgta-taaatttat 10765046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 194 - 310
Target Start/End: Complemental strand, 13493504 - 13493389
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| ||| |||  | |||    
T  13493504 agatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaa 13493405  T
Q  294 ggatgtagtaaatttat 310  Q
    ||||||| |||||||||    
T  13493404 ggatgta-taaatttat 13493389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 477 - 571
Target Start/End: Complemental strand, 33898399 - 33898305
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||    
T  33898399 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagc 33898305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 466 - 592
Target Start/End: Complemental strand, 20964540 - 20964415
Alignment:
Q  466 ctctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgc 565  Q
    ||||||| || ||||||||| ||||||||||||||||||||| ||||| ||||||| ||||||||||| ||||||||| ||||||| |||||||||| ||    
T  20964540 ctctatgacaaattaactaagtagttttgatcaatctcttgaatcaaa-ccctttcctaagttataaccttttaatctcttaaaccaattgaataactgc 20964442  T
Q  566 ggaagcgataacagaacatttattcat 592  Q
    |||||| ||| |||||| || ||||||    
T  20964441 ggaagcaatatcagaacgttaattcat 20964415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 489 - 576
Target Start/End: Original strand, 16838991 - 16839078
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| ||||    
T  16838991 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcaataa 16839078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 489 - 576
Target Start/End: Original strand, 16848921 - 16849008
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| ||||    
T  16848921 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcaataa 16849008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 489 - 592
Target Start/End: Original strand, 24200301 - 24200404
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 588  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||  |||| |||| |||||||||||||||||| ||||||||||||| ||||| || ||    
T  24200301 gttttgatcaatctcttgaatcaaaaccctttcctaagttataatctttttatctcttaaaccgattgaataactgcggaagcgataaaagaacgttaat 24200400  T
Q  589 tcat 592  Q
    ||||    
T  24200401 tcat 24200404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 477 - 571
Target Start/End: Original strand, 23441329 - 23441423
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||| ||||||| |||||||||    
T  23441329 attaactaagtggttttgatcaatctcttgacacaaaaccctttcctaagttataaccttttaatctcttaaaccgaatgaataatcgcggaagc 23441423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 477 - 569
Target Start/End: Original strand, 3087770 - 3087862
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaa 569  Q
    ||||||||| | |||||||||||||||| |||||||||| ||||  ||||||||||| ||||||||| |||||||||||||||||| ||||||    
T  3087770 attaactaagtggttttgatcaatctctcgactcaaaactctttactaagttataaccttttaatctcttaaaccgattgaataactgcggaa 3087862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 196 - 278
Target Start/End: Original strand, 50196721 - 50196803
Alignment:
Q  196 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 278  Q
    ||||||||||||||||||||||||||| ||| || ||||||| || |||||||||||||||||||||||| || |||||||||    
T  50196721 atatttggcaagtgtaccaaaaactattgaagtaataataaaatttgtatccacgaggaccgttgttaatctcaacttagcaa 50196803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 198 - 310
Target Start/End: Complemental strand, 13496224 - 13496114
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 297  Q
    ||||| |||||| ||||||| |||||||| || |||  || ||||||||||||||||||||||||||||||||||  |||| ||| |||  | |||||||    
T  13496224 atttgacaagtgaaccaaaa-ctatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaaggat 13496126  T
Q  298 gtagtaaatttat 310  Q
    ||| |||||||||    
T  13496125 gta-taaatttat 13496114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 17902557 - 17902600
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  17902557 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 17902600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 20981708 - 20981665
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  20981708 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 20981665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 16190203 - 16190295
Alignment:
Q  215 aaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaatt 307  Q
    |||||||||||| || |||  || ||||||||||||||||| ||||||||||| || |   |||   ||||||||||||||||||| ||||||    
T  16190203 aaaactatcgaagtaataaataaattcgtatccacgaggactgttgttaatttttattcgacaaaaacgttaaaataaaggatgtattaaatt 16190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 24200017 - 24200056
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  24200017 atttggcaagtgtaccaataactatcgaagtagtaataaa 24200056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 37642210 - 37642167
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    ||||||||| |||||||||||| |||||||||| ||||||||||    
T  37642210 agatatttgacaagtgtaccaataactatcgaagtagtaataaa 37642167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 515
Target Start/End: Original strand, 5317893 - 5317931
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaac 515  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  5317893 attaacaaaatagttttgatcaatctcttgaatcaaaac 5317931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 32505861 - 32505922
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggacc 256  Q
    |||||||||||||||| ||||||| |||||||| || |||  ||| |||||||||||||||||    
T  32505861 agatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtatccacgaggacc 32505922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 16838709 - 16838746
Alignment:
Q  200 ttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  16838709 ttggcaagtgtaccaataactatcgaagtagtaataaa 16838746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 16848639 - 16848676
Alignment:
Q  200 ttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  16848639 ttggcaagtgtaccaataactatcgaagtagtaataaa 16848676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 14546487 - 14546527
Alignment:
Q  196 atatttggcaagtgtaccaaaaactatcgaattagtaataa 236  Q
    |||||||||||||||| ||||||||||||||  ||||||||    
T  14546487 atatttggcaagtgtatcaaaaactatcgaagaagtaataa 14546527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 15297559 - 15297492
Alignment:
Q  203 gcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctac 271  Q
    ||||||||||||||| |||||||| ||||||   | ||| |||||||| ||||||||||||| ||||||    
T  15297559 gcaagtgtaccaaaa-ctatcgaagtagtaaatgaattcatatccacggggaccgttgttaacttctac 15297492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 128; Significance: 7e-66; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 194 - 571
Target Start/End: Original strand, 39659716 - 39660096
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39659716 agatatttggcaagtgtaccgaaa-ctatcgaagtagtaataaagttcgtatccacgaggaccattgttaatttctacttagcaagttcgttaaaataaa 39659814  T
Q  294 ggatgtagtaaa-tttat-gggttgctctaggcagctgaatttgg-tgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaac 390  Q
    |||||||||||| ||||| ||||||| |||||||| || |||||| |  |||||| |||||    | | || |||| |||||||  | ||  | ||||||    
T  39659815 ggatgtagtaaattttatggggttgccctaggcagttggatttggttttataaaacgtaaa--caaagtaaataaaatggtttgataattggattaaaac 39659912  T
Q  391 agataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaa 486  Q
    |||| ||| ||||||| ||||||||||||| || |||||| |||||||    |||||| ||| || |   || ||||| || || | || ||| ||| |     
T  39659913 agatgatctagcctttcgaatcctctattgctcaccgtgagtaatttggctctcttctctctcaaagaaattaacctagctttacgacaaatt-acttag 39660011  T
Q  487 tagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  39660012 tggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcagaagc 39660096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 215 - 571
Target Start/End: Complemental strand, 13332428 - 13332068
Alignment:
Q  215 aaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaa-tttat-gg 312  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||    
T  13332428 aaaactatcgaagtagtaataaagtttgtatccatgaggaccgttgttaatttatacttagcaagttcgttaaaataaaggatgtagtaaattttatggg 13332329  T
Q  313 gttgctctaggcagctgaatttg-gtgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagataatcaagccttt-gaat 410  Q
    ||||| |||||||| || |||||  |  |||||| |||||    | | || |||| |||||||  | ||  | ||||||| || ||||||||||| ||||    
T  13332328 gttgccctaggcagttggatttgattttataaaacgtaaa--caaagtaaataaaatggtttgataattgaattaaaacatatgatcaagcctttcgaat 13332231  T
Q  411 cctctattgttcgccgtgaataatttgctagtcttctatct--taatgttcacctaactctatggcatattaactaaatagttttgatcaatctcttgac 508  Q
    ||||||||| || |||||| ||||||  |  |||||| |||   ||  || ||||| || || | || ||||||||| | ||||||||||||||||||||    
T  13332230 cctctattgctcaccgtgagtaattttgttctcttctctctcaaaaaattaacctagctttacgacaaattaactaagtggttttgatcaatctcttgac 13332131  T
Q  509 tcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  13332130 tcaaaaccctttcctaagttataacattttaatctcttaaaccgattgaataaccgcggaagc 13332068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 194 - 336
Target Start/End: Complemental strand, 9467425 - 9467283
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9467425 agatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttcttcttagcaagttcgttaaaataaa 9467326  T
Q  294 ggatgtagtaaatttatgggttgctctaggcagctgaatttgg 336  Q
    |||||||||||||||||   |||| |||||||| || ||||||    
T  9467325 ggatgtagtaaatttatcaattgccctaggcagttggatttgg 9467283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 194 - 337
Target Start/End: Complemental strand, 453947 - 453803
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    ||||||||| ||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  453947 agatatttgacaagtgtaccaaaaactatggaagtactaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 453848  T
Q  294 ggatgtagtaaa-tttatgggttgctctaggcagctgaatttggt 337  Q
    |||| ||||||| |||||||||||| | |||||| || |||||||    
T  453847 ggatttagtaaattttatgggttgccccaggcagttggatttggt 453803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 194 - 564
Target Start/End: Complemental strand, 5828387 - 5828013
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||  |||| ||| | ||||||||||   |||   ||||||||||||    
T  5828387 agatatttggcaagtgtaccaaaagctatcgaagtagtagtaaagttcgtatccacatggactgtt-tcaatttctactcgtcaaaagcgttaaaataaa 5828289  T
Q  294 ggatgtagtaaatttatgggttgctctaggcagctgaatttggt-gca-taaaatgtaaatgagatgcaattaaattggtttggaatttataataaaaca 391  Q
    ||||| | |||||||||||||||| |||||||| || ||||||| ||| ||||| |||||| | | | || |||| |||||||  | ||  | |||||||    
T  5828288 ggatgcattaaatttatgggttgccctaggcagttggatttggttgcaataaaaagtaaataaca-gaaaataaaatggtttgataattggattaaaaca 5828190  T
Q  392 gataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaat 487  Q
     || ||||||||||| ||||||||||||| ||   |||| ||||||||   |||||| ||| || |   || ||||| || ||      ||||||||| |    
T  5828189 tatcatcaagcctttcgaatcctctattgctcagtgtgagtaatttgcctctcttctctctcaaagaaattaacctagctttacaaaggattaactaagt 5828090  T
Q  488 agttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccg 564  Q
     ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||    
T  5828089 ggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccg 5828013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 20262629 - 20262514
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||      
T  20262629 attaactaattagttttgatcaatctcttgactcaaaaccctttcttaagttataaccttttaatctcttaatccgattgaataaccgcggaagcgatgt 20262530  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  20262529 cagaacgttaattcat 20262514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 21049259 - 21049144
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||      
T  21049259 attaactaattagttttgatcaatctcttgactcaaaaccctttcttaagttataaccttttaatctcttaatccgattgaataaccgcggaagcgatgt 21049160  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  21049159 cagaacgttaattcat 21049144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 477 - 594
Target Start/End: Complemental strand, 14188075 - 14187958
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  14188075 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagccataa 14187976  T
Q  577 cagaacatttattcatgt 594  Q
     || || || ||||||||    
T  14187975 aagtacgttaattcatgt 14187958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 477 - 594
Target Start/End: Complemental strand, 22654336 - 22654219
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  22654336 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaaattataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 22654237  T
Q  577 cagaacatttattcatgt 594  Q
     || || || ||||||||    
T  22654236 aagtacgttaattcatgt 22654219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 477 - 593
Target Start/End: Complemental strand, 5964330 - 5964214
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  5964330 attaactaagtagatttgatcaatctcttgactcaaaaccatttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 5964231  T
Q  577 cagaacatttattcatg 593  Q
     ||||| || |||||||    
T  5964230 aagaacgttaattcatg 5964214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 30645547 - 30645432
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||| |||||||||      
T  30645547 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttctaaccttttaatcttttaaaccgattgaataaccgtggaagcgatgt 30645448  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  30645447 cagaacgttaattcat 30645432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 477 - 591
Target Start/End: Original strand, 27863599 - 27863713
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| || ||||| |||||    
T  27863599 attaactaaatagttttgatcaatctcttgactcaaaaccctttcctaagttataacattttaatctcttaaaccgattgaataatcgtggaagagataa 27863698  T
Q  577 cagaacatttattca 591  Q
     ||||| || |||||    
T  27863699 aagaacgttaattca 27863713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 489 - 592
Target Start/End: Original strand, 17013089 - 17013192
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 588  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||||| ||    
T  17013089 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaacattaat 17013188  T
Q  589 tcat 592  Q
    ||||    
T  17013189 tcat 17013192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 477 - 592
Target Start/End: Original strand, 18696020 - 18696135
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||| |||      
T  18696020 attaactaagtagttttgatcaatctcttgactcgaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagagatgt 18696119  T
Q  577 cagaacatttattcat 592  Q
    ||||||||| ||||||    
T  18696120 cagaacattaattcat 18696135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 489 - 592
Target Start/End: Complemental strand, 17544112 - 17544009
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 588  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||||| ||    
T  17544112 gttttgatcaatatcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaacattaat 17544013  T
Q  589 tcat 592  Q
    ||||    
T  17544012 tcat 17544009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 489 - 574
Target Start/End: Original strand, 24903541 - 24903626
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||||||    
T  24903541 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataatcgcggaagcgat 24903626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 31981422 - 31981307
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||| ||||| || |  ||||||||| ||||||||||||||||||| || |||||||      
T  31981422 attaactaattagttttgatcaatctcttgattcaaaaccctttcataagtaatgatcttttaatctcttaaaccgattgaataaccacgaaagcgatgt 31981323  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  31981322 cagaacgttaattcat 31981307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 491 - 582
Target Start/End: Complemental strand, 24435091 - 24435000
Alignment:
Q  491 tttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaac 582  Q
    |||| |||||||||||| |||||||| |||| || |||||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  24435091 tttggtcaatctcttgaatcaaaaccttttcctaggttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaac 24435000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 491 - 582
Target Start/End: Complemental strand, 24445137 - 24445046
Alignment:
Q  491 tttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaac 582  Q
    |||| |||||||||||| |||||||| |||| || |||||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  24445137 tttggtcaatctcttgaatcaaaaccttttcctaggttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaac 24445046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 477 - 562
Target Start/End: Complemental strand, 587387 - 587302
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataac 562  Q
    ||||||| | ||| ||||||||||||||||||||||| ||||||| || |||||||| ||||||||| ||||| ||||||||||||    
T  587387 attaacttattagctttgatcaatctcttgactcaaagccctttcctaggttataaccttttaatctcttaaatcgattgaataac 587302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 477 - 562
Target Start/End: Original strand, 626535 - 626620
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataac 562  Q
    ||||||| | ||| ||||||||||||||||||||||| ||||||| || |||||||| ||||||||| ||||| ||||||||||||    
T  626535 attaacttattagctttgatcaatctcttgactcaaagccctttcctaggttataaccttttaatctcttaaatcgattgaataac 626620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 477 - 532
Target Start/End: Complemental strand, 31986349 - 31986294
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 532  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  31986349 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagtaataa 31986294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 307
Target Start/End: Original strand, 12575306 - 12575416
Alignment:
Q  196 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 295  Q
    |||||||||||||||||||||  | |||||| || |||  || ||||||||||||||||| |||||||| ||||||| | ||||||| |||  | |||||    
T  12575306 atatttggcaagtgtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggactgttgttaacttctactcaacaagttcattattaaaaagg 12575404  T
Q  296 atgtagtaaatt 307  Q
    ||||| ||||||    
T  12575405 atgtattaaatt 12575416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 24903254 - 24903297
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  24903254 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 24903297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 477 - 515
Target Start/End: Complemental strand, 453662 - 453624
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaac 515  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  453662 attaactaagtagttttgatcaatctcttgactcaaaac 453624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 5980067 - 5980124
Alignment:
Q  199 tttggcaagtgtaccaaaaactatcgaattagtaata-aagttcgtatccacgaggac 255  Q
    |||| ||||||||||||||||||||||| || ||| | ||||||||||||||||||||    
T  5980067 tttgacaagtgtaccaaaaactatcgaagtaataacataagttcgtatccacgaggac 5980124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 233
Target Start/End: Original strand, 17012801 - 17012840
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaa 233  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  17012801 agatatttggcaagtgtaccaataactatcgaagtagtaa 17012840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 17544400 - 17544361
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaa 233  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  17544400 agatatttggcaagtgtaccaataactatcgaagtagtaa 17544361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 22654612 - 22654570
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataa 236  Q
    |||||||||||||||||| ||| |||||||||| |||||||||    
T  22654612 agatatttggcaagtgtatcaataactatcgaagtagtaataa 22654570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 326
Target Start/End: Original strand, 12820690 - 12820782
Alignment:
Q  233 ataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaatttatgggttgctctaggcag 326  Q
    |||||||||||||||||  |||| ||| | ||||||||||  ||||    |||||||||||||||||  ||| |||||||||||| ||||||||    
T  12820690 ataaagttcgtatccacatggactgtt-tcaatttctactcggcaaagatgttaaaataaaggatgtgttaagtttatgggttgccctaggcag 12820782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 17931329 - 17931296
Alignment:
Q  200 ttggcaagtgtaccaaaaactatcgaattagtaa 233  Q
    ||||||||||||||||||||||||||| ||||||    
T  17931329 ttggcaagtgtaccaaaaactatcgaagtagtaa 17931296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 477 - 521
Target Start/End: Original strand, 31468169 - 31468213
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttc 521  Q
    ||||||| ||||||||| ||||||||||||| ||||||| |||||    
T  31468169 attaactcaatagttttcatcaatctcttgagtcaaaacactttc 31468213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 7e-66; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 194 - 571
Target Start/End: Complemental strand, 13979493 - 13979113
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    ||||||||||||||||||| || ||||| |||| ||||||||||  | || ||||| |||||||||||||||| |||||||||||||||||| | |||||    
T  13979493 agatatttggcaagtgtactaataactaacgaagtagtaataaatattgt-tccacaaggaccgttgttaattcctacttagcaagttcgttgacataaa 13979395  T
Q  294 ggatgtagtaaatttatgggttgctctaggcagctgaatttgg-tgc-ataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaaca 391  Q
    |||||||||||||||||||||| | |||||||| || |||||| ||| |||||| |||||| | | | || |||| |||||||  | ||  | |||||||    
T  13979394 ggatgtagtaaatttatgggttaccctaggcagttggatttggttgcaataaaaagtaaataaca-gaaaataaaatggtttgataattggattaaaaca 13979296  T
Q  392 gataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatctta--atgttcacctaactctatggcatattaactaaata 488  Q
    ||| ||||||||||| |||||||||||||||| | |||| ||||||||   |||||| ||| |  |  || ||||| || || | |  ||||||||| |     
T  13979295 gatgatcaagcctttcgaatcctctattgttcactgtgagtaatttgcctctcttctctctcaagaaattaacctagctttacgacggattaactaagtg 13979196  T
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  13979195 gttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcagaagc 13979113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 198 - 571
Target Start/End: Complemental strand, 15851529 - 15851152
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 297  Q
    |||||||||||||||||||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15851529 atttggcaagtgtaccaaaa-ctatcgaagtaatagtaaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 15851431  T
Q  298 gtagtaaa-tttat-gggttgctctaggcagctgaatttgg-tgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagat 394  Q
    |||||||| ||||| ||||||| |||||| | || |||||| |  |||||| |||||    | | || |||| |||||||  | ||    ||||||||||    
T  15851430 gtagtaaattttatggggttgccctaggctgttggatttggttttataaaacgtaaa--caaagtaaataaaatggtttgataattgggttaaaacagat 15851333  T
Q  395 aatcaagcc-tttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagt 490  Q
     |||||||| |||||||||||||||| || |||||| |||||||    |||||| ||| || |   || ||||| || || | || ||||||||| | ||    
T  15851332 gatcaagccttttgaatcctctattgctctccgtgagtaatttggctctcttctctctcaaagaaattaacctagctttacgacaaattaactaagtggt 15851233  T
Q  491 tttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    |||||||||||| |||||||||||||||||| ||||||||||| ||||||||| |||||| |||||||||| |||||||||    
T  15851232 tttgatcaatcttttgactcaaaaccctttcctaagttataaccttttaatctcttaaacagattgaataatcgcggaagc 15851152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 194 - 322
Target Start/End: Original strand, 33400079 - 33400207
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  33400079 agatatttggcaagtgtaccaaaagctatcgaggtagtaataaagttcgtatccacgagaaccgttgttaatttctgcttagcaagttcgttaaaataaa 33400178  T
Q  294 ggatgtagtaaatttatgggttgctctag 322  Q
    ||||||| |||||||||||||||| ||||    
T  33400179 ggatgtaataaatttatgggttgccctag 33400207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 194 - 571
Target Start/End: Complemental strand, 19929238 - 19928859
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||||||||| |||||||||| ||||||||||  |||| |||||||||||||||||||||||||||||||||||||| || | |||||    
T  19929238 agatatttggcaagtgtaccaataactatcgaagtagtaataaatatcgt-tccacgaggaccgttgttaatttctacttagcaagttctttgacataaa 19929140  T
Q  294 ggatgtagtaaattt-atgggttgctctaggcagctgaatttggtgcataaaatgtaaatgagatgcaattaaattggtttggaatttataat-aaaaca 391  Q
    |||||| |||||||| ||  ||  ||  ||||||  |  ||  ||||||||||  ||||| | | | || |||| |||||||  | ||  | | ||||||    
T  19929139 ggatgt-gtaaattttataagtgcctg-aggcagtaggtttgtgtgcataaaaattaaataaca-gaaaataaaatggtttgataattggatttaaaaca 19929043  T
Q  392 gataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaat 487  Q
    ||| ||||||||||| ||||||||||||| || | |||| ||||||||   |||||| ||| || |   || |||||||| || | |  ||||||||| |    
T  19929042 gatgatcaagcctttcgaatcctctattgctcactgtgagtaatttgcctctcttctctctcaaagaaattaacctaactttacgacggattaactaagt 19928943  T
Q  488 agttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
     ||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||    
T  19928942 ggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatatcttaaaccgattgaataaccgcggaagc 19928859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 477 - 593
Target Start/End: Complemental strand, 18859852 - 18859736
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  18859852 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 18859753  T
Q  577 cagaacatttattcatg 593  Q
     ||| | || |||||||    
T  18859752 aagatcgttaattcatg 18859736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 477 - 574
Target Start/End: Complemental strand, 10247889 - 10247792
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  10247889 attaactaattagttttgatcaatctcttgactcaaaaccatttcctaagttataaccttttaatcttttaaactggttgaataaccgcggaagcgat 10247792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 477 - 574
Target Start/End: Original strand, 11702632 - 11702729
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||||| |||||||||||||||||||||||    
T  11702632 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttaaaaccttttaatctcttaaactgattgaataaccgcggaagcgat 11702729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 489 - 574
Target Start/End: Complemental strand, 14701967 - 14701882
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  14701967 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgat 14701882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 489 - 592
Target Start/End: Original strand, 3719553 - 3719656
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 588  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||| || ||    
T  3719553 gttttgatcaatctcttcaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaacgttaat 3719652  T
Q  589 tcat 592  Q
    ||||    
T  3719653 tcat 3719656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 489 - 576
Target Start/End: Original strand, 49636581 - 49636668
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  49636581 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataa 49636668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 196 - 310
Target Start/End: Original strand, 647209 - 647322
Alignment:
Q  196 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 295  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||  |||| ||| |||  | |||||    
T  647209 atatttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaagg 647308  T
Q  296 atgtagtaaatttat 310  Q
    ||||| |||||||||    
T  647309 atgta-taaatttat 647322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 477 - 571
Target Start/End: Complemental strand, 23653348 - 23653254
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||| |||||||||||||| | |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  23653348 attaactaattagttttgatcaattttttgactcaaaaccctttcctaagttataacattttaatctcttaaaccgattgaataaccgtggaagc 23653254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 477 - 571
Target Start/End: Original strand, 26703536 - 26703630
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||| | ||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||    
T  26703536 attaactaagtggttttgatcaatctcttgactcaaaactctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagc 26703630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 196 - 272
Target Start/End: Original strand, 650481 - 650557
Alignment:
Q  196 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact 272  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  650481 atatttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctact 650557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 196 - 337
Target Start/End: Complemental strand, 37176993 - 37176855
Alignment:
Q  196 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 295  Q
    |||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||||| ||| | ||||||||||  ||||   | ||||||||||||    
T  37176993 atatttggcaagtgtaccaaaagctatcga--tagtaataaagttcgtatccacaaggactgtt-tcaatttctactcggcaaaagctttaaaataaagg 37176897  T
Q  296 atgtagtaaatttatgggttgctctaggcagctgaatttggt 337  Q
    ||||| |||||||||||||||| |||| ||| || |||||||    
T  37176896 atgtattaaatttatgggttgccctagacagttggatttggt 37176855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 466 - 592
Target Start/End: Complemental strand, 10386018 - 10385899
Alignment:
Q  466 ctctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgc 565  Q
    ||||||| || ||||||||| |||||||||||||||||||||||||||||||||||       ||||| ||||||||| |||||||||||||||||||||    
T  10386018 ctctatgacaaattaactaattagttttgatcaatctcttgactcaaaaccctttc-------ataaccttttaatctcttaaaccgattgaataaccgc 10385926  T
Q  566 ggaagcgataacagaacatttattcat 592  Q
     ||||||||  |||||| || ||||||    
T  10385925 agaagcgatgtcagaacgttaattcat 10385899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 489 - 576
Target Start/End: Complemental strand, 3734374 - 3734287
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||  |||||||||||||    
T  3734374 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaactgattgaataattgcggaagcgataa 3734287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 489 - 576
Target Start/End: Original strand, 49639874 - 49639961
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||  |||||||||||||    
T  49639874 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaactgattgaataattgcggaagcgataa 49639961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 496 - 598
Target Start/End: Original strand, 33400392 - 33400494
Alignment:
Q  496 tcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttattcatgtc 595  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||||| || |||||||||||||| ||||||||||||  |||||  || |||||||||    
T  33400392 tcaatctcttgactcaaaactctttcctaagttataaccttttaatctcttcaaccgattgaataatcgcggaagcgatgtcagaatgttaattcatgtc 33400491  T
Q  596 ata 598  Q
    |||    
T  33400492 ata 33400494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 477 - 554
Target Start/End: Complemental strand, 17670386 - 17670309
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgat 554  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| | ||||||||||    
T  17670386 attaattaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatatcttaaaccgat 17670309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 477 - 565
Target Start/End: Complemental strand, 11560886 - 11560799
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgc 565  Q
    ||||||||| |||||| ||||||||| |||||||||||| ||||| ||||||||||| | ||||||| |||||||||||||| ||||||    
T  11560886 attaactaattagttt-gatcaatcttttgactcaaaactctttcctaagttataacctattaatctcttaaaccgattgaacaaccgc 11560799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 492 - 562
Target Start/End: Original strand, 24605307 - 24605377
Alignment:
Q  492 ttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataac 562  Q
    |||||||||||||||| ||||| ||||||| || |||||||| ||||||||| ||||||||||||||||||    
T  24605307 ttgatcaatctcttgaatcaaagccctttcctaggttataaccttttaatctcttaaaccgattgaataac 24605377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 477 - 562
Target Start/End: Original strand, 7394916 - 7395000
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataac 562  Q
    ||||||| | ||| ||||||||||||||||||||||| |||| |||| ||||||||| ||||||||| ||||||||||||| ||||    
T  7394916 attaacttattagctttgatcaatctcttgactcaaagccctatctt-agttataaccttttaatctcttaaaccgattgattaac 7395000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 310
Target Start/End: Complemental strand, 12172214 - 12172099
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||| ||||||  | |||||| || ||| |||| |||| ||||||||||| ||  |||| ||||||||||||| ||| |||  | |||    
T  12172214 agatatttggcaagtgaaccaaattcgatcgaagtaataaaaaagatcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaa 12172115  T
Q  294 ggatgtagtaaatttat 310  Q
    ||||||| |||||||||    
T  12172114 ggatgta-taaatttat 12172099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 3719265 - 3719308
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  3719265 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 3719308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 485 - 532
Target Start/End: Complemental strand, 39050649 - 39050602
Alignment:
Q  485 aatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 532  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||||||    
T  39050649 aatagttttgatcaatcttttgagtcaaaaccctttcttaaattataa 39050602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 2542124 - 2542012
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||||||||||  | |||||| || |||  || ||||||||||||||||| ||  |||| ||||||| ||||| ||| |||  | |||    
T  2542124 agatatttggcaagtgtaccaaagtcaatcgaagtaataaataa-ttcgtatccacgaggactgtatttaacttctactgagcaatttcattattaaaaa 2542026  T
Q  294 ggatgtagtaaatt 307  Q
    ||||||| ||||||    
T  2542025 ggatgtattaaatt 2542012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 21217359 - 21217416
Alignment:
Q  215 aaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact 272  Q
    ||||||||| || || ||||||| ||||||| ||||||||||||| ||||||||||||    
T  21217359 aaaactatcaaagtaataataaaattcgtattcacgaggaccgttattaatttctact 21217416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 464
Target Start/End: Original strand, 21217499 - 21217600
Alignment:
Q  363 taaattggtttggaatttataataaaacagataatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacc 462  Q
    |||||||||||| || ||| | |||||||||||||||| ||||  ||||||||||||  | | |||||||||||| |  |||||| ||| |||||| |||    
T  21217499 taaattggtttgaaaattagattaaaacagataatcaatccttcaaatcctctattgcgcactgtgaataatttgattttcttctctctcaatgttaacc 21217598  T
Q  463 ta 464  Q
    ||    
T  21217599 ta 21217600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 8871474 - 8871537
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaa--taaagttcgtatccacgaggac 255  Q
    |||||| |||||||||||||||||||||||||| ||||||   |||| |||| |||||||||||    
T  8871474 agatatctggcaagtgtaccaaaaactatcgaagtagtaaagaaaagatcgtctccacgaggac 8871537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 307
Target Start/End: Original strand, 26062698 - 26062808
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgagga--ccgttgttaatttctacttagcaagttcgttaaaataaagg 295  Q
    |||||||||||| ||||||| |||||||| || |||  || ||||||||||||||||  |||||||||| ||||||| | ||| ||| |||  | |||||    
T  26062698 atttggcaagtgaaccaaaa-ctatcgaaataataaataaattcgtatccacgaggaccccgttgttaacttctactcaacaatttctttatcaaaaagg 26062796  T
Q  296 atgtagtaaatt 307  Q
    ||||| ||||||    
T  26062797 atgtattaaatt 26062808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 3734662 - 3734619
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||    
T  3734662 agataattggcaagtgtaccaataactatcgaagtagtaataaa 3734619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 14702255 - 14702212
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    ||||||||||||| |||||||| |||||||||| ||||||||||    
T  14702255 agatatttggcaaatgtaccaataactatcgaagtagtaataaa 14702212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 307
Target Start/End: Original strand, 24605051 - 24605121
Alignment:
Q  236 aagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaatt 307  Q
    |||||||||||||| ||||| ||| | ||||||||||| ||||   ||||||||||||||||||| ||||||    
T  24605051 aagttcgtatccacaaggactgtt-tcaatttctacttggcaaaaacgttaaaataaaggatgtattaaatt 24605121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 49639586 - 49639629
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||    
T  49639586 agataattggcaagtgtaccaataactatcgaagtagtaataaa 49639629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 48013158 - 48013233
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaatta--gtaataaagttcgtatccacgaggaccgttgttaatttc 268  Q
    |||| ||| |||||||||| ||||||||||||| ||   |||||||||| || ||||||||||||| ||||||||||    
T  48013158 agatgtttagcaagtgtactaaaaactatcgaagtaatataataaagtttgtttccacgaggaccg-tgttaatttc 48013233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 237
Target Start/End: Complemental strand, 11561159 - 11561123
Alignment:
Q  201 tggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  11561159 tggcaagtgtacaaaaaactatcgaagtagtaataaa 11561123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 125; Significance: 4e-64; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 196 - 570
Target Start/End: Original strand, 19515 - 19894
Alignment:
Q  196 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 295  Q
    |||||||||||||||||||||| || || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19515 atatttggcaagtgtaccaaaa-ctgtcaaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 19613  T
Q  296 atgtagtaaa-tttat-gggttgctctaggcagctgaatttgg-tgc-ataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaaca 391  Q
    |||||||||| ||||| ||||||| |||||||| || |||||| ||| |||||| || ||| | | | || |||| |||||||  | ||  | |||||||    
T  19614 atgtagtaaattttatggggttgccctaggcagttggatttggttgcaataaaaagt-aataaca-gaaaataaaatggtttgataattggattaaaaca 19711  T
Q  392 gataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaat 487  Q
    ||| |||||| |||| |||| |||||||| || |  ||| ||||||||   |||||| ||| || |   || ||||| || || |    ||||||||| |    
T  19712 gatgatcaagactttcgaatactctattgctcacaatgagtaatttgcctctcttctctctcaaagaaattaacctagctttacgaagaattaactaagt 19811  T
Q  488 agttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaag 570  Q
     ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  19812 ggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaag 19894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 1e-58; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 235 - 569
Target Start/End: Original strand, 35026932 - 35027270
Alignment:
Q  235 aaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaatttatgggttgctctaggcagctgaattt 334  Q
    ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||| || ||||    
T  35026932 aaagttcgtatccacaaggaacgttgttaatttctacttaacaagttcgttaaaataaaggatgtattaaatttatgggttgccctaggcagttggattt 35027031  T
Q  335 gg-tgc-ataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacagataatcaagccttt-gaatcctctattgttcgccgtgaat 431  Q
    || ||| |||||| ||||   |   | || |||| |||||||  | ||  | |||||||||| ||||||||||| ||||||||||||| || |  ||| |    
T  35027032 ggttgcaataaaaagtaa--taacggaaaataaaatggtttgataattggattaaaacagatgatcaagcctttcgaatcctctattgctcactatgagt 35027129  T
Q  432 aatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagtt 528  Q
    |||||||   |||||| ||| || |   || ||||| || || | || ||||||||| | ||||||||||||||||||||||||||||||||| ||||||    
T  35027130 aatttgcctctcttctctctcaaagaaattaacctagctttacgacagattaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagtt 35027229  T
Q  529 ataactttttaatcttttaaaccgattgaataaccgcggaa 569  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  35027230 ataaccttttaatctcttaaaccgattgaataaccgcggaa 35027270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 194 - 592
Target Start/End: Complemental strand, 12747169 - 12746764
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||| ||| | ||||||||||  ||||   ||||||||||||    
T  12747169 agatatttgacaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggactgtt-tcaatttctactcggcaaaagcgttaaaataaa 12747071  T
Q  294 ggatgtagtaaatttatgggttgctctaggcagctgaatttgg-tgc-ataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaaca 391  Q
    ||||||| |||||||||||||||| |||||||| || |||||| ||| |||||| || ||| | | | || |||| |||||||  | ||  | |||||||    
T  12747070 ggatgtattaaatttatgggttgccctaggcagttggatttggttgcaataaaaagtgaataaca-gaaaataaaatggtttgataattggattaaaaca 12746972  T
Q  392 gataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaat 487  Q
    ||| |||||||||||  |||||||||||| ||   |||| ||||||||   |||||| ||| || |   || ||||| || || | |  ||||||||| |    
T  12746971 gatgatcaagcctttcaaatcctctattgctcattgtgagtaatttgcctctcttctctctcaaagaaattaacctagctttacgacggattaactaagt 12746872  T
Q  488 agttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatc---ttttaaaccgattgaataaccgcggaagcgataacagaacat 584  Q
     ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||   | |||||||||||||||||||| |||||| ||  |||||| |    
T  12746871 ggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttattaaaccgattgaataaccgtggaagctatgtcagaacgt 12746772  T
Q  585 ttattcat 592  Q
    | ||||||    
T  12746771 taattcat 12746764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 194 - 326
Target Start/End: Complemental strand, 11411123 - 11410990
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    ||||| ||| ||||||||||||||||||||||| || |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  11411123 agataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgagtaccattgttaatttctacttagcaagttcgttaaaataaa 11411024  T
Q  294 ggatgtagtaaa-tttatgggttgctctaggcag 326  Q
    |||||||||||| |||||||||||| ||||||||    
T  11411023 ggatgtagtaaattttatgggttgccctaggcag 11410990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 194 - 571
Target Start/End: Original strand, 28894239 - 28894620
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    ||||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||  |||| ||| | ||||||||||  ||||   ||||||||||||    
T  28894239 agatatttgacaagtgtaacaaaagctatcgaagtagtaataaagttcgtatccacatggactgtt-tcaatttctactcggcaaaaacgttaaaataaa 28894337  T
Q  294 ggatgtagtaaatttatgggttgctctaggcagctgaatttgg-tgc-ataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaaca 391  Q
    ||||||| |||||||||||||||| |||||||| |  |||||| ||| |||||| |||||| | | | || |||| |||||||  | ||  | |||||||    
T  28894338 ggatgtattaaatttatgggttgccctaggcagttagatttggttgcaataaaaagtaaataaca-gaaaataaaatggtttgataattggattaaaaca 28894436  T
Q  392 gataatcaagc-ctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaat 487  Q
    ||| |||||||  ||||||| |||||||| || | |||| ||||||||   |||||| ||| || |   || ||||| || || ||   ||||||||  |    
T  28894437 gatgatcaagcattttgaattctctattgctcactgtgagtaatttgcctctcttctctctcaaagaaattaacctagctttacggtggattaactatgt 28894536  T
Q  488 agttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
     ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||| |||||    
T  28894537 ggttttgatcaatctcttgactcaaaaccctttcctaagttataacattttaatctcttaaaccaattgaataaccgcagaagc 28894620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 196 - 323
Target Start/End: Original strand, 33678947 - 33679076
Alignment:
Q  196 atatttggcaagtgtaccaaaa--actatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    ||||||||||||||||||||||  ||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  33678947 atatttggcaagtgtaccaaaaaaactatcgaagtagtactaaagttcatatccacgaggaccgttgttaatttctacttaacaagttagttaaaataaa 33679046  T
Q  294 ggatgtagtaaatttatgggttgctctagg 323  Q
    |||||||  ||||||||||||||| |||||    
T  33679047 ggatgtatgaaatttatgggttgccctagg 33679076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 34502416 - 34502301
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||      
T  34502416 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgatgt 34502317  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  34502316 cagaacgttaattcat 34502301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 477 - 598
Target Start/End: Original strand, 5618262 - 5618383
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||      
T  5618262 attaactaattagttttgatcaatctcttcactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcagaagcgatgt 5618361  T
Q  577 cagaacatttattcatgtcata 598  Q
    |||||| || |||||| |||||    
T  5618362 cagaacgttaattcatatcata 5618383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 477 - 574
Target Start/End: Complemental strand, 11410838 - 11410741
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    |||||||||  |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  11410838 attaactaaggagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgat 11410741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 477 - 593
Target Start/End: Complemental strand, 14966304 - 14966188
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  14966304 attaactaagtagatttgatcaatctcttgactcaaacccctttcctaggttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 14966205  T
Q  577 cagaacatttattcatg 593  Q
     ||||| || |||||||    
T  14966204 aagaacgttaattcatg 14966188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 477 - 582
Target Start/End: Complemental strand, 14969784 - 14969679
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  14969784 attaactaagtagatttgatcaatctcttgactcaaaatcctttcataggttataaccttttaatctcttaaaccgattgaataaccgcggaagcgataa 14969685  T
Q  577 cagaac 582  Q
     |||||    
T  14969684 aagaac 14969679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 194 - 310
Target Start/End: Complemental strand, 14790860 - 14790745
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||| ||| |||  | |||    
T  14790860 agatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaa 14790761  T
Q  294 ggatgtagtaaatttat 310  Q
    ||||||| |||||||||    
T  14790760 ggatgta-taaatttat 14790745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 17231929 - 17231814
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| ||||||  ||||||||||||||||||||||      
T  17231929 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagtcataaccttttaatctcttaaactaattgaataaccgcggaagcgatgt 17231830  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  17231829 cagaacgttaattcat 17231814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 28117913 - 28117798
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||      
T  28117913 attaacttattagctttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcagaagcgatgt 28117814  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  28117813 cagaacgttaattcat 28117798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 477 - 594
Target Start/End: Original strand, 3826863 - 3826980
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||||||||  ||| |||||    
T  3826863 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataaccgcaaaagggataa 3826962  T
Q  577 cagaacatttattcatgt 594  Q
     || || || ||||||||    
T  3826963 aagtacgttaattcatgt 3826980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 477 - 565
Target Start/End: Complemental strand, 31123506 - 31123418
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgc 565  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||    
T  31123506 attaactaattagttttgatcaatctcttaactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgc 31123418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 477 - 571
Target Start/End: Original strand, 15578960 - 15579054
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||||||||||| |||||||    
T  15578960 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataatcttttaatctcttaaaccgattgaataaccacggaagc 15579054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 477 - 571
Target Start/End: Original strand, 33679234 - 33679328
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||| | ||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||    
T  33679234 attaactaagtggttttgatcaatctcttaactcaaaaccctttcgtaagttataacattttaatctcttaaaccgattgaataactgcggaagc 33679328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 477 - 574
Target Start/End: Original strand, 9313830 - 9313927
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||| |||||||||||    
T  9313830 attaacttattagctttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatatcttaaaccgattgaataactgcggaagcgat 9313927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 194 - 310
Target Start/End: Complemental strand, 14795888 - 14795773
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||||||||||||  |||| ||| |||  | |||    
T  14795888 agatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtacctacgaggaccgttgttaatttctactcggcaatttctttatcaaaaa 14795789  T
Q  294 ggatgtagtaaatttat 310  Q
    ||||||| |||||||||    
T  14795788 ggatgta-taaatttat 14795773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 492 - 592
Target Start/End: Complemental strand, 22920587 - 22920487
Alignment:
Q  492 ttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttattca 591  Q
    |||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| || |||||||||| ||||| || |||||    
T  22920587 ttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcagaagcgataaaagaacgttaattca 22920488  T
Q  592 t 592  Q
    |    
T  22920487 t 22920487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 2331355 - 2331240
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| || ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||||| |||||||||||| |||||||| ||      
T  2331355 attaactaagtacttttgatcaatctcttgactcaaaaccatttcctaagttataaccttttaatctcttaaatcgattgaataactgcggaagctatgt 2331256  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  2331255 cagaacgttaattcat 2331240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 571
Target Start/End: Original strand, 7560232 - 7560314
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||||||||||||||||||||| ||||| |||| |||||| ||||||||| |||||||||||||||||| ||||||||    
T  7560232 gttttgatcaatctcttgactcaaaactctttcctaagctataaccttttaatctcttaaaccgattgaataactgcggaagc 7560314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 489 - 571
Target Start/End: Original strand, 11296195 - 11296277
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||||||||||||| |||||||||||||| || ||||||| ||||||||| | |||||||||||||||||||||||||    
T  11296195 gttttgatcaatctcttgattcaaaaccctttctcaaattataacattttaatctctaaaaccgattgaataaccgcggaagc 11296277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 477 - 571
Target Start/End: Complemental strand, 2330703 - 2330609
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||| || ||||||| |||||||||||| |||||| |||| ||||||||||| ||||||||| |||||||||||||||||| ||| ||||    
T  2330703 attaactaagtacttttgattaatctcttgactgaaaaccatttcataagttataaccttttaatctattaaaccgattgaataactgcgaaagc 2330609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 477 - 549
Target Start/End: Original strand, 7560144 - 7560216
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaa 549  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |||||    
T  7560144 attaactaattagttttgatcaatctcttgactcaaaactctttcctaagttataaccttttaatctcttaaa 7560216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 477 - 571
Target Start/End: Complemental strand, 17696664 - 17696569
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataact-ttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||| | | ||||||||||||||||||||||||||||||  |||||||||||| | ||||||| | || | ||||||||||||||||||||    
T  17696664 attaactaagtggctttgatcaatctcttgactcaaaaccctttactaagttataactctattaatctctaaatcagattgaataaccgcggaagc 17696569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 485 - 562
Target Start/End: Original strand, 20189483 - 20189560
Alignment:
Q  485 aatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataac 562  Q
    ||||| ||||||||||| ||||||||||| | ||||| || |||||||| ||||||||| ||||||||||||||||||    
T  20189483 aatagctttgatcaatcacttgactcaaatcactttcctaggttataaccttttaatctcttaaaccgattgaataac 20189560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 485 - 562
Target Start/End: Complemental strand, 22146508 - 22146431
Alignment:
Q  485 aatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataac 562  Q
    ||||| ||||||||||| ||||||||||| | ||||| || |||||||| ||||||||| ||||||||||||||||||    
T  22146508 aatagctttgatcaatcacttgactcaaatcactttcctaggttataaccttttaatctcttaaaccgattgaataac 22146431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 477 - 529
Target Start/End: Original strand, 13095764 - 13095816
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagtta 529  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  13095764 attaactaaatagttttgatcaatctcttaactcaaaaccctttcctaagtta 13095816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 491 - 562
Target Start/End: Complemental strand, 16731433 - 16731362
Alignment:
Q  491 tttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataac 562  Q
    |||||||||||||||||||||||  |||||| || |||||||| ||||||||| |||| |||||||||||||    
T  16731433 tttgatcaatctcttgactcaaagtcctttcctaggttataaccttttaatctcttaagccgattgaataac 16731362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 2331631 - 2331588
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  2331631 agatatttggcaagtgtaccaaaaactatcgaagtagtaataaa 2331588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 198 - 307
Target Start/End: Original strand, 19664674 - 19664782
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 297  Q
    |||||||||||| ||||||| |||||||| || |||  || || ||||||||||||||||||||| ||||||||| | ||| ||| |||  | |||||||    
T  19664674 atttggcaagtgaaccaaaa-ctatcgaagtaataaataaatttgtatccacgaggaccgttgtttatttctactcaacaatttctttatcaaaaaggat 19664772  T
Q  298 gtagtaaatt 307  Q
    ||| ||||||    
T  19664773 gtattaaatt 19664782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 22221959 - 22221903
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggac 255  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||| |||||||||||    
T  22221959 atttggcaagtgtaccaaaagctatcgaagtagtaataaa-ttcgtttccacgaggac 22221903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 22247794 - 22247738
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggac 255  Q
    |||||||||||||||||||| |||||||| |||||||||| ||||| |||||||||||    
T  22247794 atttggcaagtgtaccaaaagctatcgaagtagtaataaa-ttcgtttccacgaggac 22247738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 310
Target Start/End: Complemental strand, 1838712 - 1838602
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 297  Q
    |||||||||||| |||||||  ||||||| || |||  || ||||||||||| ||||||||||||||||||||||  |||| ||| |||  | |||||||    
T  1838712 atttggcaagtgaaccaaaat-tatcgaagtaataaataaattcgtatccacaaggaccgttgttaatttctactcggcaatttctttatcaaaaaggat 1838614  T
Q  298 gtagtaaatttat 310  Q
    ||| |||||||||    
T  1838613 gta-taaatttat 1838602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 545 - 593
Target Start/End: Complemental strand, 14969673 - 14969625
Alignment:
Q  545 ttaaaccgattgaataaccgcggaagcgataacagaacatttattcatg 593  Q
    |||||||||||||||||||||||||||||||| ||||| || |||||||    
T  14969673 ttaaaccgattgaataaccgcggaagcgataaaagaacgttaattcatg 14969625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 239 - 307
Target Start/End: Complemental strand, 15535252 - 15535184
Alignment:
Q  239 ttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaatt 307  Q
    |||||||||||||||||||||||||| ||||||| ||| | ||| ||| || |||||||||| ||||||    
T  15535252 ttcgtatccacgaggaccgttgttaacttctactcagccatttctttataaaaaaggatgtattaaatt 15535184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 326
Target Start/End: Original strand, 15578763 - 15578807
Alignment:
Q  282 cgttaaaataaaggatgtagtaaatttatgggttgctctaggcag 326  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||    
T  15578763 cgttaaaataaaggatgtattaaatttatgggttgccctaggcag 15578807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 23842565 - 23842621
Alignment:
Q  200 ttggcaagtgtaccaaaaactatcgaattagtaata-aagttcgtatccacgaggac 255  Q
    ||||||||||||||||||||||||||| || ||| | ||||||||||||||||||||    
T  23842565 ttggcaagtgtaccaaaaactatcgaaataataaaataagttcgtatccacgaggac 23842621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 22920878 - 22920835
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  22920878 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 22920835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 477 - 518
Target Start/End: Complemental strand, 26391011 - 26390970
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccct 518  Q
    |||||| |||||||||||||||||||||||| ||||||||||    
T  26391011 attaacaaaatagttttgatcaatctcttgattcaaaaccct 26390970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 477 - 521
Target Start/End: Complemental strand, 6856656 - 6856612
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttc 521  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||    
T  6856656 attaacttaataattttgatcaatctcttgattcaaaaccctttc 6856612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 310
Target Start/End: Original strand, 13017193 - 13017307
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||| ||||||  | |||||| || ||| ||||||||| |||||||||||  |  |||| ||||||||||||| ||| |||  | |||    
T  13017193 agatatttggcaagtgaaccaaattcgatcgaagtaataa-aaagttcgtttccacgaggactatatttaacttctacttagcaatttcattattaaaaa 13017291  T
Q  294 ggatgtagtaaatttat 310  Q
    ||||||| |||||||||    
T  13017292 ggatgta-taaatttat 13017307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 23848129 - 23848073
Alignment:
Q  200 ttggcaagtgtaccaaaaactatcgaattagtaata-aagttcgtatccacgaggac 255  Q
    ||||||||||||||||||||||||||  || ||| | ||||||||||||||||||||    
T  23848129 ttggcaagtgtaccaaaaactatcgacataataaaataagttcgtatccacgaggac 23848073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 278
Target Start/End: Complemental strand, 27649338 - 27649259
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 278  Q
    |||||||||||| || |||| |||||||| || |||  ||| ||| ||||||||||||||||||||||| ||||| |||||    
T  27649338 atttggcaagtgaactaaaa-ctatcgaagtaataaataagatcgaatccacgaggaccgttgttaattcctactcagcaa 27649259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 17232204 - 17232161
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    ||||||||| |||||||||||| |||||||||| ||||||||||    
T  17232204 agatatttgacaagtgtaccaataactatcgaagtagtaataaa 17232161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 28974140 - 28974226
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataa--agttcgtatccacgaggaccgttgttaatttctacttagcaa 278  Q
    |||||||||||||||||| | |||||||||||| || ||||||  | |  |||||||||||||  ||||||||| || |||||||||    
T  28974140 agatatttggcaagtgtatccaaaactatcgaagtaataataataaatctgtatccacgaggattgttgttaatgtcaacttagcaa 28974226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 286
Target Start/End: Complemental strand, 17696936 - 17696849
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact-tagcaagttcgtta 286  Q
    |||||||||||||||||  |||||||||| ||||||||||  |||| ||||| ||||| | |||||||||| | | ||||||||||||||    
T  17696936 atttggcaagtgtaccaccaactatcgaagtagtaataaatatcgt-tccacaaggactg-tgttaatttcaattctagcaagttcgtta 17696849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 32427540 - 32427429
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||| ||||| ||||||| |||||||| || |||  || || ||||| ||||||||||||||||| ||||||| ||||| ||| |||  | |||    
T  32427540 agatatttggtaagtgaaccaaaa-ctatcgaagtaataaataaatttgtatctacgaggaccgttgttaa-ttctactcagcaatttctttatcaaaaa 32427443  T
Q  294 ggatgtagtaaatt 307  Q
     |||||| ||||||    
T  32427442 agatgtattaaatt 32427429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 521
Target Start/End: Original strand, 28974433 - 28974469
Alignment:
Q  485 aatagttttgatcaatctcttgactcaaaaccctttc 521  Q
    |||||||||||||||||||| || |||||||||||||    
T  28974433 aatagttttgatcaatctctagagtcaaaaccctttc 28974469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 278
Target Start/End: Complemental strand, 34502677 - 34502614
Alignment:
Q  215 aaaactatcgaattagtaata-aagttcgtatccacgaggaccgttgttaatttctacttagcaa 278  Q
    |||||||||||| |||||| | |||||||||||||||||||| | ||||||| || |||||||||    
T  34502677 aaaactatcgaagtagtaaaataagttcgtatccacgaggactg-tgttaatctcaacttagcaa 34502614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 4e-55; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 196 - 571
Target Start/End: Original strand, 38315807 - 38316186
Alignment:
Q  196 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 295  Q
    |||||||| ||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  38315807 atatttggtaagtgtatcaaaa-ctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaa-ttctacttagcaagttcgttaaaattaagg 38315904  T
Q  296 atgtagtaaattt--atgggttgctctaggcagctgaatttgg-tgcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacag 392  Q
    |||||||||||||    ||||||  |||||||| || |||||| |||||||||  | |||   | | || |||| |||||||  | ||  | ||||||||    
T  38315905 atgtagtaaattttacggggttgtcctaggcagttggatttggttgcataaaa-cttaatacaaagtaaataaaatggtttgataattggattaaaacag 38316003  T
Q  393 ataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaata 488  Q
    || ||||||||||| ||||||||||||| || | |||| ||||||||   |||||| ||| || |   || || || || || | || ||||||||| |     
T  38316004 atgatcaagcctttcgaatcctctattgctcacagtgagtaatttgcctctcttctctctcaaagaaattaacttagctttacgacaaattaactaagtg 38316103  T
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    || |||||||||||||| ||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||| ||||||||    
T  38316104 gtattgatcaatctcttcactcaaaaccctttcctaagttataaccttttaatatcttaaaccgattgaataactgcggaagc 38316186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 194 - 337
Target Start/End: Complemental strand, 29436109 - 29435965
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    ||||| ||| |||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29436109 agataattgacaagtgtatcaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 29436010  T
Q  294 ggatgtagtaaa-tttatgggttgctctaggcagctgaatttggt 337  Q
    |||||||||||| |||||||||||| |||||||| || |||||||    
T  29436009 ggatgtagtaaattttatgggttgcactaggcagttggatttggt 29435965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 208 - 339
Target Start/End: Original strand, 13572059 - 13572192
Alignment:
Q  208 tgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaattt--ctacttagcaagttcgttaaaataaaggatgtagtaaa 305  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||| ||    
T  13572059 tgtaccaaaagctatcgaagtagtaataaagttcgtatctacgaggaccgttgttaatttttctacttagcaaattcgttaaaataaaggatgtagtgaa 13572158  T
Q  306 tttatgggttgctctaggcagctgaatttggtgc 339  Q
    |||||||||||| |||||||| || ||| |||||    
T  13572159 tttatgggttgcactaggcagttggattaggtgc 13572192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 477 - 593
Target Start/End: Complemental strand, 11056415 - 11056299
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  11056415 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaatcgattgaataaccgcggaagcgataa 11056316  T
Q  577 cagaacatttattcatg 593  Q
     ||||| || |||||||    
T  11056315 aagaacgttaattcatg 11056299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 477 - 574
Target Start/End: Complemental strand, 29435824 - 29435727
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  29435824 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataacattttaatctcttaaaccgattgaataaccgcggaagcgat 29435727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 477 - 593
Target Start/End: Complemental strand, 11059873 - 11059757
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  11059873 attaactaagtagatttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaagcgattgaataaccgcggaagcgataa 11059774  T
Q  577 cagaacatttattcatg 593  Q
     ||||| || |||||||    
T  11059773 aagaacgttaattcatg 11059757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 477 - 574
Target Start/End: Original strand, 1503478 - 1503575
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||    
T  1503478 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttaaaaccttttaatctcttaaaccgattgaataaccgcggaagcgat 1503575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 477 - 574
Target Start/End: Original strand, 1506682 - 1506779
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||    
T  1506682 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttaaaacattttaatctcttaaaccgattgaataaccgcggaagcgat 1506779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 477 - 574
Target Start/End: Complemental strand, 4577898 - 4577801
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| || |||||| ||||||||||||||||||||||||||||||    
T  4577898 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttataatctcttaaaccgattgaataaccgcggaagcgat 4577801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 476 - 592
Target Start/End: Complemental strand, 30719849 - 30719733
Alignment:
Q  476 tattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgata 575  Q
    |||||||| | ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||     
T  30719849 tattaacttattagctttgatcaatctcttgactcaaaaccctttcctaagttataacattttaatctcttaaaccgattgaataaccgcggaagcgatg 30719750  T
Q  576 acagaacatttattcat 592  Q
     |||||| || ||||||    
T  30719749 tcagaacgttaattcat 30719733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 477 - 592
Target Start/End: Original strand, 15704015 - 15704130
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||| |||      
T  15704015 attaactaagtagttttgatcaatctcttgactcgaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagagatgt 15704114  T
Q  577 cagaacatttattcat 592  Q
    ||||||||| ||||||    
T  15704115 cagaacattaattcat 15704130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 477 - 592
Target Start/End: Original strand, 15719319 - 15719434
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| || ||||||||||||||| |||||||||||      
T  15719319 attaactaagtagttttgatcaatctcttgactcgaaaccctttcctaagttataaccttttaatctcttcaaccgattgaataactgcggaagcgatgt 15719418  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  15719419 cagaacgttaattcat 15719434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 477 - 593
Target Start/End: Complemental strand, 13518377 - 13518262
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| |||| |||||||||| ||||||||||||||||    
T  13518377 attaactaagtagatttgatcaatctcttgactcaaacccctttcctaagttataaccttttaatctcttaagccgattgaat-accgcggaagcgataa 13518279  T
Q  577 cagaacatttattcatg 593  Q
     ||||| || |||||||    
T  13518278 aagaacgttaattcatg 13518262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 489 - 576
Target Start/End: Complemental strand, 18938955 - 18938868
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  18938955 gttttgatcaatctcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgataa 18938868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 489 - 592
Target Start/End: Complemental strand, 22592575 - 22592472
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttat 588  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||| || ||    
T  22592575 gttttgatcaatctcttgagtcaaaaccctttcctaagtcataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaacgttaat 22592476  T
Q  589 tcat 592  Q
    ||||    
T  22592475 tcat 22592472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 477 - 571
Target Start/End: Original strand, 40677817 - 40677911
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||| | |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||||||| |||||||||    
T  40677817 attaactaagtggttttgatcaatctcttgacacaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataatcgcggaagc 40677911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 358 - 532
Target Start/End: Complemental strand, 40139314 - 40139140
Alignment:
Q  358 gcaattaaattggtttggaatttataataaaacagataatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgt 457  Q
    |||||||| |||||||| || ||||| ||||||| || |||||||||| ||||||||||||| || | |||||||||||| |  ||||||  || |||||    
T  40139314 gcaattaagttggtttgaaaattatattaaaacaaatgatcaagccttcgaatcctctattgctcactgtgaataatttgttcctcttcttgctcaatgt 40139215  T
Q  458 tcacctaactctatggcatattaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 532  Q
    ||| |||  | || | || ||||||  ||||||||||||||||||||||| ||||||| ||||  ||||||||||    
T  40139214 tcatctagttttacgacagattaacacaatagttttgatcaatctcttgagtcaaaactcttttctaagttataa 40139140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 477 - 594
Target Start/End: Complemental strand, 18012016 - 18011907
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| ||||||||||       |||||||||||||||    
T  18012016 attaactaagtagttttgatcaatctcttgactc-aaaccctttcctaagttataaccttttaatctcttaaaccgat-------ccgcggaagcgataa 18011925  T
Q  577 cagaacatttattcatgt 594  Q
     ||||| || ||||||||    
T  18011924 aagaacgttaattcatgt 18011907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 486 - 574
Target Start/End: Original strand, 38326319 - 38326413
Alignment:
Q  486 atagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttt------taaaccgattgaataaccgcggaagcgat 574  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |      |||||||||||||||||||||||||||||    
T  38326319 atagttttgatcaatctcttgactcaaaactctttcctaagttataaccttttaatctcttaaacctaaaccgattgaataaccgcggaagcgat 38326413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 198 - 307
Target Start/End: Original strand, 23673353 - 23673461
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 297  Q
    |||||||||||| ||||||| |||||||| || |||  || |||||||||||||||||||||||||||||||||| | ||| ||| |||  | |||||||    
T  23673353 atttggcaagtgaaccaaaa-ctatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcaacaatttctttatcaaaaaggat 23673451  T
Q  298 gtagtaaatt 307  Q
    ||| ||||||    
T  23673452 gtattaaatt 23673461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 36327167 - 36327090
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact 272  Q
    |||||||||||||||| ||||||| |||||||| || |||  || |||||||||||||||||||||||||| |||||||    
T  36327167 agatatttggcaagtgaaccaaaa-ctatcgaagtaataaataaattcgtatccacgaggaccgttgttaacttctact 36327090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 32575689 - 32575801
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||| ||||| | |||| ||| || |||  || |||||||||||||||||||||||||| ||||||| | | | ||||||| ||||||    
T  32575689 agatatttggcaagtgaaccaaca-ctattgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactcaacgatttcgttataataaa 32575787  T
Q  294 ggatgtagtaaatt 307  Q
     |||||| ||||||    
T  32575788 tgatgtattaaatt 32575801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 198 - 286
Target Start/End: Complemental strand, 16295135 - 16295048
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgtta 286  Q
    |||||||||||| ||||||| |||||||| || |||  ||| ||  ||||||||||||||||||||||||||||| ||||| |||||||    
T  16295135 atttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcaaatccacgaggaccgttgttaatttctactcagcaatttcgtta 16295048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 287
Target Start/End: Original strand, 24384929 - 24385023
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaata--aagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaa 287  Q
    |||||||||||||||||||||||| |||||||| || ||| |  || ||||||| ||||| ||| ||| |||||||||||||||||| ||| ||||    
T  24384929 agatatttggcaagtgtaccaaaa-ctatcgaagtaataaaattaaattcgtattcacgatgactgttattaatttctacttagcaatttctttaa 24385023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 326
Target Start/End: Original strand, 32074160 - 32074293
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataa--agttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaata 291  Q
    ||||||||| ||||| ||||||||  ||||||| || ||||||  | || |||||||||| |   ||||||||||||||||||| || ||| ||||  ||    
T  32074160 agatatttgacaagtataccaaaat-tatcgaagtaataataataaatttgtatccacgatggttgttgttaatttctacttagaaatttcattaatgta 32074258  T
Q  292 aaggatgtagtaaatttatgggttgctctaggcag 326  Q
    ||||||||| |||| || |||||||| ||||||||    
T  32074259 aaggatgtattaaaattgtgggttgccctaggcag 32074293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 18939243 - 18939200
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    ||||| |||||||||||||||| |||||||||| ||||||||||    
T  18939243 agataattggcaagtgtaccaataactatcgaagtagtaataaa 18939200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 22592862 - 22592819
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||    
T  22592862 agatatttggtaagtgtaccaataactatcgaagtagtaataaa 22592819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 477 - 511
Target Start/End: Original strand, 25925175 - 25925209
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactca 511  Q
    |||||| ||||||||||||||||||||||||||||    
T  25925175 attaacaaaatagttttgatcaatctcttgactca 25925209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 518
Target Start/End: Original strand, 40778988 - 40779029
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccct 518  Q
    |||||| |||||| | ||||||||||||||||||||||||||    
T  40778988 attaacaaaatagatctgatcaatctcttgactcaaaaccct 40779029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 310
Target Start/End: Complemental strand, 31528631 - 31528517
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||| ||||||  | |||||| || ||| ||| || || ||||||||||| ||  |||| ||||||||||||| ||| |||  | |||    
T  31528631 agatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattt-gtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaa 31528533  T
Q  294 ggatgtagtaaatttat 310  Q
    ||||||| |||||||||    
T  31528532 ggatgta-taaatttat 31528517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 278
Target Start/End: Original strand, 40677532 - 40677614
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 278  Q
    ||||| |||||||||||||||| |||||||||| |||||| |||  ||||  |||||||||| | |||||||||| | |||||||    
T  40677532 agataattggcaagtgtaccaataactatcgaagtagtaa-aaatatcgttcccacgaggactg-tgttaatttcaatttagcaa 40677614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 109; Significance: 2e-54; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 194 - 326
Target Start/End: Original strand, 33734 - 33865
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33734 agatatttggcaagtgtaccaaaa-ctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 33832  T
Q  294 ggatgtagtaaatttatgggttgctctaggcag 326  Q
    ||||||| |||||||||||||||| ||||||||    
T  33833 ggatgtactaaatttatgggttgccctaggcag 33865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 194 - 592
Target Start/End: Complemental strand, 4619 - 4217
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||  |||| ||  | ||||||||||  | ||   ||||||||||||    
T  4619 agatatttggcaagtgtacaaaaaactatcgaagtagtaataaagtttgtatccacagggactgta-tcaatttctactcggaaaaagcgttaaaataaa 4521  T
Q  294 ggatgtagtaaatttatgggttgctctaggcagctgaatttggt-gca-taaaatgtaaatgagatgcaattaaattggtttggaatttataataaaaca 391  Q
    ||||||| |||||||||||||||| ||||| |  || ||||||| ||| ||||| |||||| | ||  ||| |||| ||||||  | ||  | |||||||    
T  4520 ggatgtattaaatttatgggttgccctaggaaattggatttggttgcaataaaaagtaaataacataaaataaaat-ggtttgataattggattaaaaca 4422  T
Q  392 gataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaat 487  Q
    ||| ||||||||||| ||||||||||||| || | || | ||||||||  ||||||| ||| || |   || ||||| || |||| |  ||||||||| |    
T  4421 gatgatcaagcctttcgaatcctctattgctcactgtaagtaatttgcctgtcttctctctcaaagaaattaacctagctttatgacggattaactaagt 4322  T
Q  488 agttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacattta 587  Q
     |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| |||||| ||  |||||| || |    
T  4321 ggttttgatcaatcttttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataaccgtggaagctatgtcagaacgttaa 4222  T
Q  588 ttcat 592  Q
    |||||    
T  4221 ttcat 4217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 101; Significance: 9e-50; HSPs: 3)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 196 - 571
Target Start/End: Complemental strand, 13950 - 13571
Alignment:
Q  196 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 295  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||  |||| ||| | ||||||||||  ||||   ||||||||||||||    
T  13950 atatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacagggactgtt-tcaatttctactcggcaaaagcgttaaaataaagg 13852  T
Q  296 atgtagtaaatttatgggttgctctaggcagctgaatttggt--gcataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaacaga 393  Q
    ||||| |||||| ||||||||| |||||||| || |||||||    |||||| |||||| | | | || |||| |||||||  | ||  | |||||||||    
T  13851 atgtattaaattgatgggttgccctaggcagttggatttggttaaaataaaaagtaaataaca-gaaaataaaatggtttgataattggattaaaacaga 13753  T
Q  394 taatcaagcctt-tgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg---ttcacctaactctatggcatattaactaaatag 489  Q
    | ||||||||||  ||||||||||||| || |  ||| ||||||||   |||||| ||| || |   || ||||| || || | |  ||||||||| | |    
T  13752 tgatcaagccttccgaatcctctattgctcactatgagtaatttgcctctcttctctctcaaagaaattaacctagctttacgacggattaactaagtgg 13653  T
Q  490 ttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagc 571  Q
    ||||||||||||| |||||||||||||||||| ||||||||| | ||||||||| |||||||||||||||||||| ||||||    
T  13652 ttttgatcaatctattgactcaaaaccctttcctaagttatacccttttaatctcttaaaccgattgaataaccgtggaagc 13571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 196 - 337
Target Start/End: Complemental strand, 11607 - 11467
Alignment:
Q  196 atatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagg 295  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||||||||||  |||| ||| | ||||| ||||  ||||   ||||||||||||||    
T  11607 atatttggcaagtgtaccaaaagctatcgaagcagtaataaagttcgtatccacagggactgtt-tcaatttatactcggcaaaagcgttaaaataaagg 11509  T
Q  296 atgtagtaaatttatgggttgctctaggcagctgaatttggt 337  Q
    ||||| |||||||||||||| | |||||||| || |||||||    
T  11508 atgtattaaatttatgggtttccctaggcagttggatttggt 11467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 516
Target Start/End: Complemental strand, 5670 - 5631
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaacc 516  Q
    ||||||||| | ||||||||||||||||||||||||||||    
T  5670 attaactaagtggttttgatcaatctcttgactcaaaacc 5631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 78; Significance: 5e-36; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 477 - 574
Target Start/End: Complemental strand, 2527 - 2430
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||||||    
T  2527 attaactaagtagttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataatcgcggaagcgat 2430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 477 - 574
Target Start/End: Complemental strand, 6359 - 6262
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||||||||    
T  6359 attaattaagtagttttgatcaatctcttgactcaaaatcctttcctaagttataaccttttaatctcttaaaccgattaaataatcgcggaagcgat 6262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 76; Significance: 8e-35; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 477 - 592
Target Start/End: Original strand, 52927 - 53042
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| |||||||||||||||||| ||||||| |||      
T  52927 attaactaagtagttttgatcaatctcttgactcgaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagagatgt 53026  T
Q  577 cagaacatttattcat 592  Q
    ||||||||| ||||||    
T  53027 cagaacattaattcat 53042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 477 - 592
Target Start/End: Original strand, 67876 - 67991
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| || ||||||||||||||| |||||||||||      
T  67876 attaactaagtagttttgatcaatctcttgactcgaaaccctttcctaagttataaccttttaatctcttcaaccgattgaataactgcggaagcgatgt 67975  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  67976 cagaacgttaattcat 67991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 492 - 592
Target Start/End: Complemental strand, 7296 - 7196
Alignment:
Q  492 ttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacatttattca 591  Q
    ||||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||| || |||||    
T  7296 ttgatcaatctcttgactcaaaaccttttcctaagttataacattttaatctcttaaaccgattgaataaccgcggaagcgatgtcagaacgttaattca 7197  T
Q  592 t 592  Q
    |    
T  7196 t 7196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 68; Significance: 4e-30; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 13679 - 13565
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||  ||||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||      
T  13679 attaactaattagtttc-atcaatctcttgactcaaaactctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgatgt 13581  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  13580 cagaacgttaattcat 13565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 27695 - 27581
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| ||||||  ||||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||      
T  27695 attaactaattagtttc-atcaatctcttgactcaaaactctttcctaagttataaccttttaatctcttaaaccgattgaataaccgcggaagcgatgt 27597  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  27596 cagaacgttaattcat 27581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 20129 - 20014
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    |||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||  ||||||||||||||||||||| ||||| ||      
T  20129 attaacaaattagttttgatcaatctcttgactcaaaactctttcctaagttataaccttttaatcgcttaaaccgattgaataaccgcagaagccatgt 20030  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  20029 cagaacgttaattcat 20014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 385 - 560
Target Start/End: Complemental strand, 92601 - 92423
Alignment:
Q  385 taaaacagataatcaagccttt-gaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatg--ttcacctaactctatggcatattaa 481  Q
    |||||||||| ||||||||||| |||||||||||||||| | |||| ||||||||   |||||| ||| ||    || ||||| || || | |  |||||    
T  92601 taaaacagatgatcaagcctttcgaatcctctattgttcactgtgagtaatttgcctctcttctctctcaagaaattaacctagctttacgacggattaa 92502  T
Q  482 ctaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaata 560  Q
    |||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||    
T  92501 ctaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaata 92423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 489 - 592
Target Start/End: Original strand, 26935 - 27039
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataac-tttttaatcttttaaaccgattgaataaccgcggaagcgataacagaacattta 587  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||| |||||||||| |||||||||||||||||| ||||||||||||| ||||| || |    
T  26935 gttttgatcaatctcttgagtcaaaaccctttcctaagtcataacctttttaatctcttaaaccgattgaataactgcggaagcgataaaagaacgttaa 27034  T
Q  588 ttcat 592  Q
    |||||    
T  27035 ttcat 27039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 26647 - 26690
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  26647 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 26690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 64; Significance: 1e-27; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 29395 - 29280
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |  ||||||||||||||||||| |||||| ||      
T  29395 attaactaagtggttttgatcaatctcttgactcaaaaccctttcctaagttataaccttttaatttcctaaaccgattgaataaccgtggaagctatgt 29296  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  29295 cagaacgttaattcat 29280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 53192 - 53077
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataa 576  Q
    ||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| |||| |||| | |||||||||||||||| | |||||| ||      
T  53192 attaactaagtggttttgatcaatctcttgactcaaaaccccttcttaagttataaccttttcatctctcaaaccgattgaataactgtggaagctatgt 53093  T
Q  577 cagaacatttattcat 592  Q
    |||||| || ||||||    
T  53092 cagaacgttaattcat 53077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 194 - 438
Target Start/End: Complemental strand, 42961 - 42716
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaa 293  Q
    ||||||||| |||||||||||||| |||||||| | |||||||||||||||| |||  |||| ||| | || |||||||  ||||   ||||||||||||    
T  42961 agatatttgtcaagtgtaccaaaagctatcgaagtcgtaataaagttcgtattcacagggactgtt-tcaacttctactcggcaaaaacgttaaaataaa 42863  T
Q  294 ggatgtagtaaatttatgggttgctctaggcagctgaatttgg-tgc-ataaaatgtaaatgagatgcaattaaattggtttggaatttataataaaaca 391  Q
    ||||||| ||||||||||| || | |||||||  || |||||| ||| |||||| |||||| | | | || |||| |||||||  | ||  | |||||||    
T  42862 ggatgtattaaatttatggatttccctaggcatttggatttggttgcaataaaaagtaaataaca-gaaaataaaatggtttgataattggattaaaaca 42764  T
Q  392 gataatcaagccttt-gaatcctctattgttcgccgtgaataatttgc 438  Q
    ||| ||||||||||| ||||||||||||| || | |||| ||||||||    
T  42763 gatgatcaagcctttcgaatcctctattgctcactgtgagtaatttgc 42716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 198 - 325
Target Start/End: Original strand, 90306 - 90432
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 297  Q
    |||||||||||||||||||| |||||||| || |||||||||||||||||||  |||| ||| | ||||||||||  ||||   ||||||||||||||||    
T  90306 atttggcaagtgtaccaaaagctatcgaagtactaataaagttcgtatccacatggactgtt-tcaatttctactcggcaaaagcgttaaaataaaggat 90404  T
Q  298 gtagtaaatttatgggttgctctaggca 325  Q
    ||| |||||||||||||||| |||||||    
T  90405 gtattaaatttatgggttgccctaggca 90432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1048 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold1048
Description:

Target: scaffold1048; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 489 - 574
Target Start/End: Complemental strand, 1463 - 1378
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  1463 gttttgatcaatatcttgaatcaaaaccctttcctaagttataaccttttaatctcttaaaccgattgaataactgcggaagcgat 1378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 477 - 574
Target Start/End: Original strand, 28704 - 28801
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgat 574  Q
    |||||| || || ||||||| |||||||||| ||||||||||||| ||||||||||| ||||||| | |||||| |||||||||||||||||||||||    
T  28704 attaacaaattaattttgataaatctcttgaatcaaaaccctttcctaagttataaccttttaatgtcttaaacagattgaataaccgcggaagcgat 28801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 28428 - 28471
Alignment:
Q  194 agatatttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  28428 agatatttggcaagtgtaccaataactatcgaagtagtaataaa 28471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 489 - 582
Target Start/End: Complemental strand, 27423 - 27330
Alignment:
Q  489 gttttgatcaatctcttgactcaaaaccctttcttaagttataactttttaatcttttaaaccgattgaataaccgcggaagcgataacagaac 582  Q
    |||||| |||||||||||| |||||||| |||| || |||||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  27423 gttttgttcaatctcttgaatcaaaaccttttcctaggttataaccttttaatctcttaaaccgattgaataactgcggaagcgataaaagaac 27330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 27705 - 27668
Alignment:
Q  200 ttggcaagtgtaccaaaaactatcgaattagtaataaa 237  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  27705 ttggcaagtgtaccaataactatcgaagtagtaataaa 27668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 198 - 307
Target Start/End: Original strand, 2627 - 2734
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggat 297  Q
    |||||||||||| ||||||| |||||||| || |||  ||| ||||||||||||||||||||||||| ||||||| ||||| |||||||  | |||||||    
T  2627 atttggcaagtggaccaaaa-ctatcgaagtaataaataagatcgtatccacgaggaccgttgttaacttctactcagcaatttcgttatca-aaaggat 2724  T
Q  298 gtagtaaatt 307  Q
    ||| ||||||    
T  2725 gtattaaatt 2734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 477 - 532
Target Start/End: Complemental strand, 228707 - 228652
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaaccctttcttaagttataa 532  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  228707 attaactaattagttttgatcaatctcttgactcaaaaccctttcctaagtaataa 228652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 229 - 307
Target Start/End: Complemental strand, 3713 - 3635
Alignment:
Q  229 agtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaatt 307  Q
    ||||||||| || ||||||||||||||||||||||| ||||||| ||||| ||  |||| ||||| |||||| ||||||    
T  3713 agtaataaaatttgtatccacgaggaccgttgttaacttctactcagcaatttaattaagataaatgatgtattaaatt 3635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 385 - 513
Target Start/End: Original strand, 468418 - 468544
Alignment:
Q  385 taaaacagataatcaagcctttgaatcctctattgttcgccgtgaataatttgctagtcttctatcttaatgttcacctaactctatggcatattaacta 484  Q
    ||||||| || |||||||||| ||||  ||||||| || | ||||||||||||||  |||||| ||  ||||||||||||  | || | || ||||||      
T  468418 taaaacatatgatcaagccttcgaattgtctattgctcactgtgaataatttgctcctcttctctc--aatgttcacctagttttacgacagattaaccc 468515  T
Q  485 aatagttttgatcaatctcttgactcaaa 513  Q
    ||||||||||||||||||||||| |||||    
T  468516 aatagttttgatcaatctcttgaatcaaa 468544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 272
Target Start/End: Original strand, 24193 - 24266
Alignment:
Q  198 atttggcaagtgtaccaaaaactatcgaattagtaataaagttcgtatccacgaggaccgttgttaatttctact 272  Q
    |||||||||||||||||||| |||||||| |||||||||| || || ||||||||||| ||  |||| |||||||    
T  24193 atttggcaagtgtaccaaaagctatcgaagtagtaataaa-tttgtttccacgaggactgtatttaacttctact 24266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 520
Target Start/End: Original strand, 475 - 518
Alignment:
Q  477 attaactaaatagttttgatcaatctcttgactcaaaacccttt 520  Q
    |||||| |||||||||||||||||||||||| |||||| |||||    
T  475 attaacaaaatagttttgatcaatctcttgagtcaaaatccttt 518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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