View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14732_low_7 (Length: 251)

Name: NF14732_low_7
Description: NF14732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14732_low_7
NF14732_low_7
[»] chr7 (22 HSPs)
chr7 (1-119)||(31742671-31742789)
chr7 (120-234)||(767136-767250)
chr7 (119-220)||(24873750-24873851)
chr7 (119-219)||(24874527-24874627)
chr7 (120-234)||(767900-768014)
chr7 (120-169)||(41617980-41618029)
chr7 (186-234)||(27917761-27917809)
chr7 (117-164)||(46491692-46491739)
chr7 (120-162)||(30581272-30581314)
chr7 (119-152)||(34809005-34809038)
chr7 (119-164)||(41358975-41359020)
chr7 (120-169)||(41965776-41965825)
chr7 (120-156)||(17114145-17114181)
chr7 (120-164)||(41617192-41617236)
chr7 (120-164)||(42818557-42818601)
chr7 (111-158)||(3314946-3314993)
chr7 (117-156)||(41965109-41965148)
chr7 (119-164)||(28007156-28007201)
chr7 (125-158)||(36611556-36611589)
chr7 (120-164)||(36611498-36611542)
chr7 (122-158)||(44876944-44876980)
chr7 (119-159)||(46491009-46491049)
[»] chr3 (23 HSPs)
chr3 (120-234)||(14746836-14746949)
chr3 (120-234)||(14746041-14746155)
chr3 (182-234)||(35982557-35982609)
chr3 (178-220)||(41418818-41418860)
chr3 (120-230)||(43453439-43453549)
chr3 (119-227)||(16076209-16076317)
chr3 (120-158)||(20807937-20807975)
chr3 (121-158)||(54308454-54308491)
chr3 (120-164)||(15287567-15287611)
chr3 (119-163)||(53346501-53346545)
chr3 (119-163)||(54753576-54753620)
chr3 (121-164)||(9830573-9830616)
chr3 (120-167)||(47571196-47571243)
chr3 (120-167)||(49349676-49349723)
chr3 (120-155)||(49350283-49350318)
chr3 (120-158)||(4706966-4707004)
chr3 (120-158)||(20808617-20808655)
chr3 (120-216)||(43454114-43454209)
chr3 (116-169)||(41419618-41419671)
chr3 (122-155)||(48626127-48626160)
chr3 (119-168)||(53344741-53344790)
chr3 (120-164)||(53503-53547)
chr3 (117-165)||(53344014-53344062)
[»] chr8 (14 HSPs)
chr8 (120-234)||(36402959-36403073)
chr8 (120-220)||(44376643-44376743)
chr8 (119-164)||(22632972-22633017)
chr8 (114-158)||(26847091-26847135)
chr8 (119-167)||(42094008-42094056)
chr8 (121-164)||(22632323-22632366)
chr8 (120-158)||(4402297-4402335)
chr8 (120-158)||(16911056-16911094)
chr8 (119-168)||(202576-202625)
chr8 (119-168)||(317413-317462)
chr8 (120-169)||(5434032-5434081)
chr8 (120-218)||(36402201-36402299)
chr8 (120-156)||(5434781-5434817)
chr8 (120-164)||(9277786-9277830)
[»] chr1 (14 HSPs)
chr1 (120-164)||(27746162-27746206)
chr1 (119-164)||(26240875-26240920)
chr1 (120-168)||(16449555-16449603)
chr1 (120-168)||(16459129-16459177)
chr1 (120-234)||(13416269-13416383)
chr1 (120-230)||(31109239-31109349)
chr1 (120-220)||(5490511-5490610)
chr1 (119-158)||(24848436-24848475)
chr1 (119-158)||(26240113-26240152)
chr1 (119-158)||(27745555-27745594)
chr1 (120-158)||(24847783-24847821)
chr1 (119-168)||(21257917-21257966)
chr1 (120-230)||(31116622-31116732)
chr1 (120-164)||(12449316-12449360)
[»] chr5 (12 HSPs)
chr5 (120-162)||(29595600-29595642)
chr5 (120-158)||(23257319-23257357)
chr5 (120-158)||(27345929-27345967)
chr5 (119-168)||(2029047-2029096)
chr5 (119-168)||(39936254-39936302)
chr5 (120-164)||(24565573-24565617)
chr5 (120-164)||(24606609-24606653)
chr5 (120-164)||(39937910-39937954)
chr5 (120-164)||(40372164-40372208)
chr5 (120-158)||(23253496-23253534)
chr5 (119-169)||(35524121-35524171)
chr5 (119-164)||(39466884-39466929)
[»] chr6 (4 HSPs)
chr6 (178-223)||(709380-709425)
chr6 (119-163)||(5312240-5312284)
chr6 (178-230)||(10965288-10965340)
chr6 (120-164)||(16718998-16719042)
[»] chr4 (19 HSPs)
chr4 (119-164)||(34941501-34941546)
chr4 (119-234)||(21281095-21281210)
chr4 (120-162)||(51386456-51386498)
chr4 (119-168)||(34450814-34450863)
chr4 (120-168)||(47157379-47157427)
chr4 (119-158)||(14527586-14527625)
chr4 (125-168)||(47156638-47156681)
chr4 (120-158)||(24666129-24666167)
chr4 (119-157)||(26354243-26354281)
chr4 (120-158)||(42792775-42792813)
chr4 (120-166)||(52129421-52129467)
chr4 (120-169)||(13924793-13924842)
chr4 (119-164)||(13925653-13925698)
chr4 (124-169)||(18363652-18363697)
chr4 (124-169)||(36599231-36599276)
chr4 (189-230)||(45140523-45140564)
chr4 (120-164)||(6057003-6057047)
chr4 (119-155)||(24666865-24666901)
chr4 (120-156)||(25055109-25055145)
[»] chr2 (9 HSPs)
chr2 (119-168)||(127735-127784)
chr2 (120-164)||(127033-127077)
chr2 (119-158)||(20606931-20606970)
chr2 (113-156)||(24394897-24394940)
chr2 (120-165)||(18537496-18537541)
chr2 (121-158)||(34595944-34595981)
chr2 (125-158)||(44297424-44297457)
chr2 (120-164)||(7754971-7755015)
chr2 (114-150)||(10365525-10365561)
[»] scaffold0627 (1 HSPs)
scaffold0627 (119-158)||(6463-6502)
[»] scaffold0006 (1 HSPs)
scaffold0006 (177-234)||(285944-286001)


Alignment Details
Target: chr7 (Bit Score: 91; Significance: 3e-44; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 31742671 - 31742789
Alignment:
Q  1 gtttggtagttgaggtggaagagtaacggatagagaaatgatcaaggttttaaaaaaggtaagttatcgagaaaaaggctgtgacaaaaagatatagata 100  Q
    |||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||    
T  31742671 gtttggtagttgaggtggaagagtaaaggaatgagaaatgatcaaggttttaaaaaaggtaagttaccgagaaaaaggctgcgacaaaaagatatggata 31742770  T
Q  101 ccatttttccgtttttaca 119  Q
    |||||||| ||||||||||    
T  31742771 ccattttttcgtttttaca 31742789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 767136 - 767250
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcacgnnnnnnncaccattagattaaatacatggttcagatttattcaaattaaa 219  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||| || |       |||| |||||||||||||||||||||||||||||| |||||||    
T  767136 ggtggattctagggtgagggtccaattaagtccctcaccggtggatcatgaaaaaaacaccgttagattaaatacatggttcagatttattcgaattaaa 767235  T
Q  220 aatggaaacatatac 234  Q
    |||||||||||||||    
T  767236 aatggaaacatatac 767250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 24873750 - 24873851
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtggagcacgnnnnnnncaccattagattaaatacatggttcagatttattcaaattaa 218  Q
    ||||||||||||| |||||||| |||||| |||||||| ||||||| || |       ||||| |||||||||||  ||||| |||||||||||||||||    
T  24873750 aggtggattctagggtgagggtccaattaggtccctcatcagtggaccatgaaaaaaacaccaatagattaaataagtggtttagatttattcaaattaa 24873849  T
Q  219 aa 220  Q
    ||    
T  24873850 aa 24873851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 219
Target Start/End: Complemental strand, 24874627 - 24874527
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtggagcacgnnnnnnncaccattagattaaatacatggttcagatttattcaaattaa 218  Q
    ||||||||||||| ||||||||||||||| |||||||| | ||||| ||||        ||| |||||| ||||| |||||| |||||||||||||||||    
T  24874627 aggtggattctagggtgagggttcaattaggtccctcatcggtggaccacgagaaaaataccgttagataaaatagatggttaagatttattcaaattaa 24874528  T
Q  219 a 219  Q
    |    
T  24874527 a 24874527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 768014 - 767900
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcacgnnnnnnncaccattagattaaatacatggttcagatttattcaaattaaa 219  Q
    |||||||| ||| |||||||| ||||||||||||||||| ||||| ||||        || | ||||| ||||| |||| |||| |||||| ||||||||    
T  768014 ggtggattttagggtgagggtccaattaagtccctcaccggtggaccacgaaaaaaatacaagtagataaaatagatggatcaggtttatttaaattaaa 767915  T
Q  220 aatggaaacatatac 234  Q
    |||| ||||||||||    
T  767914 aatgaaaacatatac 767900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 41618029 - 41617980
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcacg 169  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| ||||    
T  41618029 ggtggattctagagtgagggtccaattaagtctctcaccagtggaccacg 41617980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 27917761 - 27917809
Alignment:
Q  186 attaaatacatggttcagatttattcaaattaaaaatggaaacatatac 234  Q
    |||||||||||| |||||||||||||||||||||||| | |||||||||    
T  27917761 attaaatacatgcttcagatttattcaaattaaaaataggaacatatac 27917809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 46491739 - 46491692
Alignment:
Q  117 acaggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    ||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  46491739 acaggtggattctagggtgagggttcaactaagtccctcaccggtgga 46491692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 30581314 - 30581272
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtg 162  Q
    |||| ||||||| ||||||||||||||||||||||||||||||    
T  30581314 ggtgaattctagggtgagggttcaattaagtccctcaccagtg 30581272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 152
Target Start/End: Complemental strand, 34809038 - 34809005
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtcc 152  Q
    ||||||||||||||||||||||||||||||||||    
T  34809038 aggtggattctagagtgagggttcaattaagtcc 34809005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 41359020 - 41358975
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||||    
T  41359020 aggtggattctagggtgagggatcaattaagtccatcaccagtgga 41358975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 41965825 - 41965776
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcacg 169  Q
    |||||||||||| |||||||| ||||||||||||||||| ||||| ||||    
T  41965825 ggtggattctagggtgagggtccaattaagtccctcaccggtggaccacg 41965776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 17114145 - 17114181
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctca 156  Q
    |||||||||||| ||||||||||||||||||||||||    
T  17114145 ggtggattctagggtgagggttcaattaagtccctca 17114181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 41617192 - 41617236
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    |||||||||||||||||| | |||||||||||||||||| |||||    
T  41617192 ggtggattctagagtgagtgatcaattaagtccctcaccggtgga 41617236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 42818601 - 42818557
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||    
T  42818601 ggtgaattctagggtgagggttcaattaagtccctcaccggtgga 42818557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 158
Target Start/End: Original strand, 3314946 - 3314993
Alignment:
Q  111 gtttttacaggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    |||||| | |||||||||||  ||||||||||||||||||||||||||    
T  3314946 gtttttgcgggtggattctacggtgagggttcaattaagtccctcacc 3314993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 156
Target Start/End: Original strand, 41965109 - 41965148
Alignment:
Q  117 acaggtggattctagagtgagggttcaattaagtccctca 156  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  41965109 acaggtggattctagggtgagggtccaattaagtccctca 41965148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 28007156 - 28007201
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    ||||||||||||| |||||||  ||||||||||||||||| |||||    
T  28007156 aggtggattctagggtgagggagcaattaagtccctcaccggtgga 28007201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 36611556 - 36611589
Alignment:
Q  125 attctagagtgagggttcaattaagtccctcacc 158  Q
    ||||||| ||||||||||||||||||||||||||    
T  36611556 attctagggtgagggttcaattaagtccctcacc 36611589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 36611542 - 36611498
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    |||||||||||| |||||||||||||||| || |||||| |||||    
T  36611542 ggtggattctagggtgagggttcaattaaatctctcaccggtgga 36611498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 44876980 - 44876944
Alignment:
Q  122 tggattctagagtgagggttcaattaagtccctcacc 158  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  44876980 tggattctagggtgagggatcaattaagtccctcacc 44876944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 46491009 - 46491049
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcacca 159  Q
    ||||||||| ||| |||||||||||||||||||| ||||||    
T  46491009 aggtggattgtagggtgagggttcaattaagtccatcacca 46491049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 14746949 - 14746836
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcacgnnnnnnncaccattagattaaatacatggttcagatttattcaaattaaa 219  Q
    |||||||||||| |||||||| ||||||||||||||| | ||||| ||||       |||| ||||||||||||||||||||| |||||||| |||||||    
T  14746949 ggtggattctag-gtgagggtccaattaagtccctcatcggtggaccacgaaaaaaacaccgttagattaaatacatggttcaaatttattcgaattaaa 14746851  T
Q  220 aatggaaacatatac 234  Q
    |||||||||||||||    
T  14746850 aatggaaacatatac 14746836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 14746041 - 14746155
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcacgnnnnnnncaccattagattaaatacatggttcagatttattcaaattaaa 219  Q
    |||||||||||| |||||||| ||||||| |||||| || ||||| ||||       | ||| ||||| ||||| |||| ||||||||||| ||||||||    
T  14746041 ggtggattctagggtgagggtccaattaaatccctccccggtggaccacgaaaaaaacgccactagatgaaatagatggatcagatttatttaaattaaa 14746140  T
Q  220 aatggaaacatatac 234  Q
    |||||||||||||||    
T  14746141 aatggaaacatatac 14746155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 35982557 - 35982609
Alignment:
Q  182 ttagattaaatacatggttcagatttattcaaattaaaaatggaaacatatac 234  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  35982557 ttagattaaatacatggttcagatttattcgaattaaaaatagaaacatatac 35982609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 41418818 - 41418860
Alignment:
Q  178 accattagattaaatacatggttcagatttattcaaattaaaa 220  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  41418818 accattagattaaataaatggttcagatttattcaaattaaaa 41418860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 43453439 - 43453549
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcacgnnnnnnncaccattagattaaatacatggttcagatttattcaaattaaa 219  Q
    |||||||||||| |||||||| ||||||| |||||||||  |||| ||||        |||| ||||||||||| |||||||| ||||||| ||||||||    
T  43453439 ggtggattctagggtgagggtccaattaaatccctcaccgctggaccacgagaaaaataccaatagattaaatagatggttcaaatttatttaaattaaa 43453538  T
Q  220 aatggaaacat 230  Q
    | ||| |||||    
T  43453539 attgggaacat 43453549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 227
Target Start/End: Original strand, 16076209 - 16076317
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtggagcacgnnnnnnncaccattagattaaatacatggttcagatttattcaaattaa 218  Q
    ||||||||||||| |||||||| |||||| ||||||||||| |||| ||||        | || ||||||||| |  ||||||||||||||| |||||||    
T  16076209 aggtggattctagggtgagggtccaattaggtccctcaccaatggaccacgagaaaaatatcaatagattaaacaagtggttcagatttatttaaattaa 16076308  T
Q  219 aaatggaaa 227  Q
    || ||||||    
T  16076309 aagtggaaa 16076317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 20807937 - 20807975
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  20807937 ggtggattctagggtgagggttcaattaagtccctcacc 20807975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 158
Target Start/End: Original strand, 54308454 - 54308491
Alignment:
Q  121 gtggattctagagtgagggttcaattaagtccctcacc 158  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  54308454 gtggattctagggtgagggttcaattaagtccctcacc 54308491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 15287567 - 15287611
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    |||||||||||| |||||||| ||||||||||||||||| |||||    
T  15287567 ggtggattctagggtgagggtccaattaagtccctcaccggtgga 15287611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 53346545 - 53346501
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtgg 163  Q
    ||||| |||||| ||||||||||||||||||||||||||| ||||    
T  53346545 aggtgaattctacagtgagggttcaattaagtccctcaccggtgg 53346501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 54753576 - 54753620
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtgg 163  Q
    ||||| ||||||  |||||||||||||||||||||||||||||||    
T  54753576 aggtgaattctacggtgagggttcaattaagtccctcaccagtgg 54753620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 9830573 - 9830616
Alignment:
Q  121 gtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    ||||||||| | |||||||||||||||||||||||||| |||||    
T  9830573 gtggattctcgggtgagggttcaattaagtccctcaccggtgga 9830616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 47571196 - 47571243
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagca 167  Q
    |||||||||||| ||||||| |||||||||||||||||| ||| ||||    
T  47571196 ggtggattctagggtgagggatcaattaagtccctcaccggtgaagca 47571243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 49349676 - 49349723
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagca 167  Q
    |||||||||||| ||||||| |||||||||||||||||| ||| ||||    
T  49349676 ggtggattctagggtgagggatcaattaagtccctcaccggtgaagca 49349723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 155
Target Start/End: Complemental strand, 49350318 - 49350283
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctc 155  Q
    |||||||||||| |||||||||||||||||||||||    
T  49350318 ggtggattctagggtgagggttcaattaagtccctc 49350283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 4707004 - 4706966
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  4707004 ggtggattctagggtgagggttctattaagtccctcacc 4706966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 20808655 - 20808617
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    |||||||||||| |||||||||||| |||||||||||||    
T  20808655 ggtggattctagggtgagggttcaagtaagtccctcacc 20808617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 43454209 - 43454114
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcacgnnnnnnncaccattagattaaatacatggttcagatttattcaaatt 216  Q
    |||||||||||| |||||||| |||||| |||||||||| ||||| ||||       ||||  | ||| ||||| ||||||||||||||||||||||    
T  43454209 ggtggattctagggtgagggtccaattaggtccctcacctgtggaccacg-agaaaacaccgatggataaaatagatggttcagatttattcaaatt 43454114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 41419671 - 41419618
Alignment:
Q  116 tacaggtggattctagagtgagggttcaattaagtccctcaccagtggagcacg 169  Q
    |||||||||||||||| |||||||  |||||| |||||||||| ||||| ||||    
T  41419671 tacaggtggattctagtgtgaggggccaattaggtccctcaccggtggaccacg 41419618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 48626160 - 48626127
Alignment:
Q  122 tggattctagagtgagggttcaattaagtccctc 155  Q
    |||||||||| |||||||||||||||||||||||    
T  48626160 tggattctagggtgagggttcaattaagtccctc 48626127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 53344790 - 53344741
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtggagcac 168  Q
    ||||||||||||| ||||||| ||||| |||||||||||| ||| |||||    
T  53344790 aggtggattctagggtgagggatcaatcaagtccctcaccggtgaagcac 53344741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 53503 - 53547
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    |||||||||||  ||||| ||||||| ||||||||||||||||||    
T  53503 ggtggattctatggtgagagttcaatcaagtccctcaccagtgga 53547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 53344014 - 53344062
Alignment:
Q  117 acaggtggattctagagtgagggttcaattaagtccctcaccagtggag 165  Q
    |||||||||||||||  |||||| ||||| |||||||||||| ||||||    
T  53344014 acaggtggattctaggatgagggatcaatcaagtccctcaccggtggag 53344062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 36403073 - 36402959
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcacgnnnnnnncaccattagattaaatacatggttcagatttattcaaattaaa 219  Q
    ||||||||||||||||||||| |||||| |||||||||| ||||| ||||       |||  |||||| ||||| |||||| ||||||||||||||||||    
T  36403073 ggtggattctagagtgagggtccaattaggtccctcaccggtggaccacgagaaaaacacagttagataaaatagatggttaagatttattcaaattaaa 36402974  T
Q  220 aatggaaacatatac 234  Q
    | ||  |||||||||    
T  36402973 agtgagaacatatac 36402959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 44376643 - 44376743
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcacgnnnnnnncaccattagattaaatacatggttcagatttattcaaattaaa 219  Q
    |||||||||||| | |||||| |||||| |||||||| | ||||| ||||        |||| || |||||||| |||||||||||||||||||||||||    
T  44376643 ggtggattctagggcgagggtccaattacgtccctcatcggtggaccacgaaaaaaataccaataaattaaatagatggttcagatttattcaaattaaa 44376742  T
Q  220 a 220  Q
    |    
T  44376743 a 44376743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 22633017 - 22632972
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    ||||||||||||| ||||||| |||||||||||||||||| |||||    
T  22633017 aggtggattctagggtgagggatcaattaagtccctcaccggtgga 22632972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 26847091 - 26847135
Alignment:
Q  114 tttacaggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||    
T  26847091 tttagaggtggattctagggtgagggtccaattaagtccctcacc 26847135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 42094008 - 42094056
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtggagca 167  Q
    ||||||||||||| ||||||| |||||||||||||||||| ||| ||||    
T  42094008 aggtggattctagggtgagggatcaattaagtccctcaccggtgaagca 42094056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 22632323 - 22632366
Alignment:
Q  121 gtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||    
T  22632323 gtggattctagggtgagggatcaattaagtccctcaccggtgga 22632366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 4402335 - 4402297
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  4402335 ggtggattctagggtgagggttctattaagtccctcacc 4402297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 16911094 - 16911056
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  16911094 ggtggattctagggtgagggctcaattaagtccctcacc 16911056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 202576 - 202625
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtggagcac 168  Q
    ||||| |||||||  ||||||||||||||||||||||||| ||| |||||    
T  202576 aggtgaattctaggatgagggttcaattaagtccctcaccggtgaagcac 202625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 317413 - 317462
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtggagcac 168  Q
    ||||| |||||||  ||||||||||||||||||||||||| ||| |||||    
T  317413 aggtgaattctaggatgagggttcaattaagtccctcaccggtgaagcac 317462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 5434032 - 5434081
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcacg 169  Q
    |||||||||||| |||||||| ||||||||||| ||||| ||||| ||||    
T  5434032 ggtggattctagggtgagggtccaattaagtccttcaccggtggaccacg 5434081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 36402201 - 36402299
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcacgnnnnnnncaccattagattaaatacatggttcagatttattcaaattaa 218  Q
    |||||||| ||| |||||||| |||||| ||||| |||| ||||| ||||       ||||| ||||||||||| |||||| | ||| |||||||||||    
T  36402201 ggtggattttagggtgagggtccaattaggtcccacaccggtggaccacgaaaaaaacaccaatagattaaataaatggtttaaattcattcaaattaa 36402299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 5434817 - 5434781
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctca 156  Q
    |||||||||||||||||| || |||||||||||||||    
T  5434817 ggtggattctagagtgagagtccaattaagtccctca 5434781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 9277830 - 9277786
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    |||||||||||| |||||||  |||||||||||||||||| ||||    
T  9277830 ggtggattctagggtgagggagcaattaagtccctcaccaatgga 9277786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 27746206 - 27746162
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  27746206 ggtggattctagcgtgagggttcaattaagtccctcaccagtgga 27746162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 26240920 - 26240875
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||    
T  26240920 aggtggattctagggtgagggttcaattaagtccctcaccggtgga 26240875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 16449555 - 16449603
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcac 168  Q
    |||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  16449555 ggtggattctagggtgagggttcaattaagtccctcaccggtgaagcac 16449603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 16459129 - 16459177
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcac 168  Q
    |||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  16459129 ggtggattctagggtgagggttcaattaagtccctcaccggtgaagcac 16459177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 234
Target Start/End: Complemental strand, 13416383 - 13416269
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcacgnnnnnnncaccattagattaaatacatggttcagatttattcaaattaaa 219  Q
    ||||||||||||  ||||||| |||||| ||||||| || ||||| ||||       |||| |||||| ||||| |||||| |||| |||||||||||||    
T  13416383 ggtggattctaggatgagggtccaattaggtccctcgccggtggaccacgagaaaaacaccgttagataaaatagatggttaagatatattcaaattaaa 13416284  T
Q  220 aatggaaacatatac 234  Q
    | ||  |||||||||    
T  13416283 agtgagaacatatac 13416269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 31109239 - 31109349
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcacgnnnnnnncaccattagattaaatacatggttcagatttattcaaattaaa 219  Q
    |||||||||||| |||||||| |||||| |||||||||| |||||  |||        |||| ||||||||| |  ||||||||||||||| ||||||||    
T  31109239 ggtggattctagggtgagggtccaattaggtccctcaccggtggactacgagaaaaataccaatagattaaacaagtggttcagatttatttaaattaaa 31109338  T
Q  220 aatggaaacat 230  Q
    | ||| |||||    
T  31109339 agtgggaacat 31109349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 5490511 - 5490610
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcacgnnnnnnncaccattagattaaatacatggttcagatttattcaaattaaa 219  Q
    |||||||||||| ||||||||||||||| ||| |||| | ||||| ||||       |||| ||| || ||||| |||||| ||||||||||||||||||    
T  5490511 ggtggattctag-gtgagggttcaattaggtctctcatcggtggaccacgagaaaaacaccgttaaataaaatagatggttaagatttattcaaattaaa 5490609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 24848475 - 24848436
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  24848475 aggtggattctagggtgagggttctattaagtccctcacc 24848436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 26240113 - 26240152
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  26240113 aggtggattctagggtgagggatcaattaagtccctcacc 26240152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 27745555 - 27745594
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  27745555 aggtggattctaaggtgagggttcaattaagtccctcacc 27745594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 24847783 - 24847821
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  24847783 ggtggattctagggtgagggttctattaagtccctcacc 24847821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 21257966 - 21257917
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtggagcac 168  Q
    ||||| ||||||  |||||||||||||||||| ||||||||||| |||||    
T  21257966 aggtgcattctaaggtgagggttcaattaagttcctcaccagtgaagcac 21257917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 230
Target Start/End: Complemental strand, 31116732 - 31116622
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcacgnnnnnnncaccattagattaaatacatggttcagatttattcaaattaaa 219  Q
    |||||||||||| |||||||| |||||| |||||||||| |||||  |||        |||| |||||||||||  |||| || ||||||| ||||||||    
T  31116732 ggtggattctagggtgagggtccaattaggtccctcaccggtggactacgagaaaaataccaatagattaaataagtggtacatatttatttaaattaaa 31116633  T
Q  220 aatggaaacat 230  Q
    | ||| |||||    
T  31116632 agtgggaacat 31116622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 12449360 - 12449316
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    |||||||| ||| ||||||| |||||||||||||||||| |||||    
T  12449360 ggtggattttagggtgagggatcaattaagtccctcaccggtgga 12449316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 29595642 - 29595600
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtg 162  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  29595642 ggtggattctagcgtgagggttcaattaagtccctcaccagtg 29595600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 23257319 - 23257357
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  23257319 ggtggattctagagtgagggtccaattaagtccctcacc 23257357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 27345967 - 27345929
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  27345967 ggtggattctagggtgagggttcaattaagtccctcacc 27345929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 2029096 - 2029047
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtggagcac 168  Q
    ||||||||||||| ||||||| |||||||||||||||||| ||| |||||    
T  2029096 aggtggattctagggtgagggctcaattaagtccctcaccggtgaagcac 2029047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 39936254 - 39936302
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtggagcac 168  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  39936254 aggtggattctaaggtgagggttcaattaagtccctcacca-tggagcac 39936302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 24565573 - 24565617
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||    
T  24565573 ggtggattctagggtgagggttcaattaaatccctcaccggtgga 24565617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 24606609 - 24606653
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||    
T  24606609 ggtggattctagggtgagggttcaattaaatccctcaccggtgga 24606653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 39937954 - 39937910
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||    
T  39937954 ggtggattctagggtgagggttcagttaagtccctcaccggtgga 39937910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 40372208 - 40372164
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    |||||||||||| |||||||||||||||||| ||||||| |||||    
T  40372208 ggtggattctagggtgagggttcaattaagttcctcaccggtgga 40372164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 23253534 - 23253496
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  23253534 ggtggattctagggtgagggtccaattaagtccctcacc 23253496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 169
Target Start/End: Original strand, 35524121 - 35524171
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtggagcacg 169  Q
    |||||||||||||  |||| |||||||||||||||||||| ||||| ||||    
T  35524121 aggtggattctaggatgagagttcaattaagtccctcaccggtggaccacg 35524171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 39466884 - 39466929
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    ||||| ||||||| |||||||| ||||||||||||||||| |||||    
T  39466884 aggtgaattctagggtgagggtccaattaagtccctcaccggtgga 39466929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 709380 - 709425
Alignment:
Q  178 accattagattaaatacatggttcagatttattcaaattaaaaatg 223  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||    
T  709380 accaatagattaaatagatggttcagatttattcaaattaaaaatg 709425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 5312240 - 5312284
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtgg 163  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||    
T  5312240 aggtgaattctacagtgagggttcaattaagtccctcaccagtgg 5312284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 10965288 - 10965340
Alignment:
Q  178 accattagattaaatacatggttcagatttattcaaattaaaaatggaaacat 230  Q
    |||||||||||||||| |||||||| ||||||| ||||||||| |||||||||    
T  10965288 accattagattaaatagatggttcaaatttatttaaattaaaagtggaaacat 10965340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 16719042 - 16718998
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    |||||||||||| |||| || |||||||||||||||||| |||||    
T  16719042 ggtggattctagggtgacggatcaattaagtccctcaccggtgga 16718998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 34941501 - 34941546
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  34941501 aggtggattctagggtgagggttcaattaagtccctcactagtgga 34941546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 21281210 - 21281095
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtggagcacgnnnnnnncaccattagattaaatacatggttcagatttattcaaattaa 218  Q
    ||||||||||||| |||||||| ||||||  ||||||| | ||||| ||||       |||| |||||| ||||| |||||| | |||||||||||||||    
T  21281210 aggtggattctagggtgagggtccaattagatccctcatcggtggaccacgagaaaaacaccgttagataaaatagatggttaaaatttattcaaattaa 21281111  T
Q  219 aaatggaaacatatac 234  Q
    || ||  |||||||||    
T  21281110 aagtgagaacatatac 21281095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 162
Target Start/End: Original strand, 51386456 - 51386498
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtg 162  Q
    |||||||| ||| ||||||||||||||||||||||||||||||    
T  51386456 ggtggattttagggtgagggttcaattaagtccctcaccagtg 51386498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 34450814 - 34450863
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtggagcac 168  Q
    ||||| ||||||| ||||||| |||||||||||||||||| |||||||||    
T  34450814 aggtgaattctagggtgagggatcaattaagtccctcaccggtggagcac 34450863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 47157427 - 47157379
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcac 168  Q
    |||| ||||||| |||||||||||||||| ||||||||| |||||||||    
T  47157427 ggtgaattctagggtgagggttcaattaaatccctcaccggtggagcac 47157379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 14527625 - 14527586
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  14527625 aggtggattctagggtgagggatcaattaagtccctcacc 14527586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 168
Target Start/End: Original strand, 47156638 - 47156681
Alignment:
Q  125 attctagagtgagggttcaattaagtccctcaccagtggagcac 168  Q
    ||||||| |||||||||||||||||||||||| | |||||||||    
T  47156638 attctagggtgagggttcaattaagtccctcatcggtggagcac 47156681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 24666129 - 24666167
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  24666129 ggtggattctagggtgagggatcaattaagtccctcacc 24666167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 157
Target Start/End: Complemental strand, 26354281 - 26354243
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcac 157  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  26354281 aggtgggttctagggtgagggttcaattaagtccctcac 26354243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 42792775 - 42792813
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  42792775 ggtggattctagggtgagggtccaattaagtccctcacc 42792813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 52129421 - 52129467
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagc 166  Q
    |||||||||||  |||||||||||||||||||||||||  |||||||    
T  52129421 ggtggattctaaggtgagggttcaattaagtccctcactggtggagc 52129467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 13924793 - 13924842
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggagcacg 169  Q
    |||||||||||| ||||||| |||||||| ||||||||| ||||| ||||    
T  13924793 ggtggattctagggtgagggctcaattaaatccctcaccggtggaccacg 13924842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 13925698 - 13925653
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    |||||||||||| |||||||| |||| ||||||||||||| |||||    
T  13925698 aggtggattctaaagtgagggatcaactaagtccctcaccggtgga 13925653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 18363697 - 18363652
Alignment:
Q  124 gattctagagtgagggttcaattaagtccctcaccagtggagcacg 169  Q
    |||||||| |||||||||||||||||| ||||||| ||||| ||||    
T  18363697 gattctagggtgagggttcaattaagttcctcaccggtggaccacg 18363652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 36599231 - 36599276
Alignment:
Q  124 gattctagagtgagggttcaattaagtccctcaccagtggagcacg 169  Q
    |||||||| |||||||||||||||||| ||||||| ||||| ||||    
T  36599231 gattctagggtgagggttcaattaagttcctcaccggtggaccacg 36599276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 45140523 - 45140564
Alignment:
Q  189 aaatacatggttcagatttattcaaattaaaaatggaaacat 230  Q
    ||||| |||||||||||||||||||||||||| ||| |||||    
T  45140523 aaatagatggttcagatttattcaaattaaaagtgggaacat 45140564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 6057047 - 6057003
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    |||||||||||| |||||||||| | ||||||||||||| |||||    
T  6057047 ggtggattctagggtgagggttctactaagtccctcaccggtgga 6057003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 155
Target Start/End: Complemental strand, 24666901 - 24666865
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctc 155  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  24666901 aggtggattatagggtgagggttcaattaagtccctc 24666865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 25055109 - 25055145
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctca 156  Q
    |||||||||||| |||||||||||||||||| |||||    
T  25055109 ggtggattctagggtgagggttcaattaagttcctca 25055145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 127784 - 127735
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcaccagtggagcac 168  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||| |||||    
T  127784 aggtggattctagggtgagggttcaattaagtccttcaccggtgaagcac 127735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 127033 - 127077
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    |||||||||||| |||||||||||| ||||||||||| |||||||    
T  127033 ggtggattctagggtgagggttcaactaagtccctcatcagtgga 127077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 20606970 - 20606931
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  20606970 aggtgaattctagggtgagggttcaattaagtccctcacc 20606931  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 24394940 - 24394897
Alignment:
Q  113 ttttacaggtggattctagagtgagggttcaattaagtccctca 156  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||    
T  24394940 ttttataggtggattctagagtgggggatcaattaagtccctca 24394897  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 18537541 - 18537496
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtggag 165  Q
    |||||||||||   ||||||||||||||||||||||||| ||||||    
T  18537541 ggtggattctatgatgagggttcaattaagtccctcaccggtggag 18537496  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 34595981 - 34595944
Alignment:
Q  121 gtggattctagagtgagggttcaattaagtccctcacc 158  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  34595981 gtggattctagagtgagggttcaactaaatccctcacc 34595944  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 44297457 - 44297424
Alignment:
Q  125 attctagagtgagggttcaattaagtccctcacc 158  Q
    ||||||| ||||||||||||||||||||||||||    
T  44297457 attctagggtgagggttcaattaagtccctcacc 44297424  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 7755015 - 7754971
Alignment:
Q  120 ggtggattctagagtgagggttcaattaagtccctcaccagtgga 164  Q
    |||||||||||| ||||||| |||||||||||| ||||| |||||    
T  7755015 ggtggattctagggtgagggatcaattaagtccttcaccggtgga 7754971  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 10365561 - 10365525
Alignment:
Q  114 tttacaggtggattctagagtgagggttcaattaagt 150  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  10365561 tttacaggtggattctagggtgagggatcaattaagt 10365525  T

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Target: scaffold0627 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 6463 - 6502
Alignment:
Q  119 aggtggattctagagtgagggttcaattaagtccctcacc 158  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  6463 aggtgggttctagggtgagggttcaattaagtccctcacc 6502  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Complemental strand, 286001 - 285944
Alignment:
Q  177 caccattagattaaatacatggttcagatttattcaaattaaaaatggaaacatatac 234  Q
    |||| |||||| ||||| |||||| ||||||||||||||||||| ||  |||||||||    
T  286001 caccgttagataaaatagatggttaagatttattcaaattaaaagtgagaacatatac 285944  T

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