View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14733_high_1 (Length: 500)

Name: NF14733_high_1
Description: NF14733
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14733_high_1
NF14733_high_1
[»] chr2 (1 HSPs)
chr2 (12-308)||(9692743-9693039)


Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 12 - 308
Target Start/End: Complemental strand, 9693039 - 9692743
Alignment:
Q  12 agaatatggaatcatatttctatataattgatccttccatgagcaattggatgctttgtaagctcaatagctgatctattgctcaccaataatctcatct 111  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9693039 agaaaatggaatcatatttctatatatttgatccttccatgagcaattggatgctttgcaagctcaatagctgatctattgctcaccaataatctcatct 9692940  T
Q  112 tcttatctttattcaaattcatctcttgcatcgacatgcttaaccattatatgcaaccactgaagatgcaatgtactctacctcacaggagtataaagct 211  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9692939 tcttatctttattcaaattcatctcttgcatcaacatgcttaaccattatatgcaaccactgaagatgcaatgtactctacctcacaagagtataaagct 9692840  T
Q  212 ataacatattccttatttgagcaccatgacattgtttcattcccataaatgaacacatatacaacaatgttttttctatcacttttgtctctgctca 308  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9692839 ataacacatttcttatttgagcaccatgacattgtttcattcccataaatgaacacatatacaacaatgttttttctatcacttttgtctctgctca 9692743  T

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