View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14735_low_4 (Length: 300)
Name: NF14735_low_4
Description: NF14735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14735_low_4 |
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| [»] chr3 (29 HSPs) |
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| [»] scaffold0078 (1 HSPs) |
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| [»] scaffold0195 (2 HSPs) |
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| [»] scaffold0266 (2 HSPs) |
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| [»] scaffold0175 (1 HSPs) |
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| [»] scaffold0023 (2 HSPs) |
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| [»] chr1 (16 HSPs) |
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| [»] scaffold0141 (2 HSPs) |
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| [»] scaffold0124 (1 HSPs) |
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| [»] scaffold0413 (1 HSPs) |
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| [»] scaffold0302 (1 HSPs) |
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| [»] scaffold0001 (2 HSPs) |
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| [»] scaffold0077 (1 HSPs) |
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| [»] scaffold0025 (3 HSPs) |
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| [»] chr6 (16 HSPs) |
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| [»] scaffold0106 (1 HSPs) |
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| [»] scaffold0218 (1 HSPs) |
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| [»] scaffold0018 (1 HSPs) |
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| [»] scaffold0008 (2 HSPs) |
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| [»] scaffold0049 (1 HSPs) |
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| [»] scaffold0011 (1 HSPs) |
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| [»] scaffold0009 (1 HSPs) |
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| [»] scaffold0162 (2 HSPs) |
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| [»] scaffold0012 (1 HSPs) |
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| [»] scaffold0498 (1 HSPs) |
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| [»] scaffold0132 (1 HSPs) |
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| [»] scaffold0026 (3 HSPs) |
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| [»] scaffold0125 (1 HSPs) |
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| [»] scaffold1542 (1 HSPs) |
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| [»] scaffold0772 (1 HSPs) |
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| [»] scaffold0075 (1 HSPs) |
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| [»] scaffold0028 (4 HSPs) |
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| [»] scaffold0529 (1 HSPs) |
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| [»] scaffold0215 (2 HSPs) |
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| [»] scaffold0369 (1 HSPs) |
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| [»] scaffold0076 (1 HSPs) |
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| [»] scaffold0420 (1 HSPs) |
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| [»] scaffold0116 (1 HSPs) |
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| [»] scaffold0022 (2 HSPs) |
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| [»] scaffold0622 (1 HSPs) |
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| [»] scaffold1711 (1 HSPs) |
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| [»] scaffold0139 (2 HSPs) |
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| [»] scaffold0104 (1 HSPs) |
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| [»] scaffold0361 (1 HSPs) |
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| [»] scaffold0066 (1 HSPs) |
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| [»] scaffold1560 (1 HSPs) |
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| [»] scaffold0456 (2 HSPs) |
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| [»] scaffold0123 (1 HSPs) |
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| [»] scaffold0084 (1 HSPs) |
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| [»] scaffold0058 (1 HSPs) |
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| [»] scaffold0409 (2 HSPs) |
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| [»] scaffold0151 (1 HSPs) |
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| [»] scaffold0032 (1 HSPs) |
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| [»] scaffold0970 (1 HSPs) |
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| [»] scaffold0389 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 244; Significance: 1e-135; HSPs: 29)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 10 - 300
Target Start/End: Complemental strand, 16744377 - 16744086
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16744377 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactacaacatttattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
16744278 |
T |
 |
| Q |
110 |
caactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt |
208 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||| ||| ||| ||||||||||||||||||||||| |
|
|
| T |
16744277 |
caactataacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttatt |
16744178 |
T |
 |
| Q |
209 |
atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16744177 |
atcaattcatggatacaaacatatcatcaaagttggagcacgaatttaacaacaatcatccataatcaaaattcatacaacatttgaaaatt |
16744086 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 17912744 - 17912483
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| |||||| |||| ||| |||||||||||||||| |
|
|
| T |
17912744 |
catcatcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcgattgaacatgaatcatagctcaatt |
17912645 |
T |
 |
| Q |
110 |
caactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt |
208 |
Q |
| |
|
|||||||||||| ||||||||||| |||| |||||||||||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| |||| |
|
|
| T |
17912644 |
caactacaacatatcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatc |
17912545 |
T |
 |
| Q |
209 |
atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
17912544 |
atcaattcatgcatacaaacatatcatc-aagttggagcacgaatttagcaacaattatccat |
17912483 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 10 - 300
Target Start/End: Complemental strand, 14842824 - 14842532
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| | |||||| |||| ||||||||| |||||||| |||| |||| | ||||||||||| |||||||||| | ||||| | |
|
|
| T |
14842824 |
catcatcaatccatgaatatgcaaacccaatcaattattcatcaatcataacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat |
14842725 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||||||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
14842724 |
taacaacaacttagcaaaattcaccaattgagcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattat |
14842625 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||| |
|
|
| T |
14842624 |
cttcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatt |
14842532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 10 - 297
Target Start/End: Complemental strand, 15859287 - 15858996
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| ||||||| |
|
|
| T |
15859287 |
catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatt |
15859188 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| | ||||||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
15859187 |
caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattat |
15859088 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa |
297 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || ||||||||||||||| |||||| |
|
|
| T |
15859087 |
catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaa |
15858996 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 21 - 300
Target Start/End: Original strand, 13838905 - 13839186
Alignment:
| Q |
21 |
catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca |
120 |
Q |
| |
|
|||||| ||| |||||||| ||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| |||||| |||| ||||| |
|
|
| T |
13838905 |
catgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatccaaccacaact |
13839004 |
T |
 |
| Q |
121 |
tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat |
218 |
Q |
| |
|
| |||| |||| | ||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| |||||||||| |
|
|
| T |
13839005 |
tagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat |
13839104 |
T |
 |
| Q |
219 |
gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
|
|
| T |
13839105 |
gcatacaaacatatcatcacagttggagcacgaatttagcaacaattattcataatcaaaattcatacaacatttgaaaatt |
13839186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 2449404 - 2449238
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||| | |
|
|
| T |
2449404 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat |
2449305 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
2449304 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
2449238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 281
Target Start/End: Complemental strand, 51158282 - 51158008
Alignment:
| Q |
9 |
acatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat |
108 |
Q |
| |
|
||||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| |||||| |
|
|
| T |
51158282 |
acatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaat |
51158183 |
T |
 |
| Q |
109 |
tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||| |
|
|
| T |
51158182 |
ctaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta |
51158083 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaatt |
281 |
Q |
| |
|
| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
51158082 |
tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaatt |
51158008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 10 - 297
Target Start/End: Complemental strand, 12030410 - 12030121
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| |||||||||||||||||||||||| |||||||| |||| || | | | ||||||||| |||||||||| | |||| | |
|
|
| T |
12030410 |
catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccataacatcaattaacaaccatagcatcaattgaacaagaatcaaatatcaaat |
12030311 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| | ||| | |||| |||| | ||| |||||| ||||| ||||| ||| || ||||||||| |||||| ||| | |||||||||| |||| |||| |
|
|
| T |
12030310 |
taacaataacttagcaaaattcaccaattgagcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattat |
12030211 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaa |
297 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| |
|
|
| T |
12030210 |
catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaagtcatacaacatttgaaa |
12030121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 10 - 297
Target Start/End: Original strand, 2049810 - 2050099
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | | ||||||||| |||| ||||| | ||||| | |
|
|
| T |
2049810 |
catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaaaaatcaaatctcaaat |
2049909 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| || || |||| | ||||||||| |||||| ||| | |||||||||| |||| |||| |
|
|
| T |
2049910 |
taacaacaacttagcaaaattcaccaattgagcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattat |
2050009 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaa |
297 |
Q |
| |
|
||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| |
|
|
| T |
2050010 |
catcaattcaggcatacaaacatatcgtcacagttggagcacgaatttagcaacaattatccataagcaaaattgatacaacatttgaaa |
2050099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 15936890 - 15936634
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| |||| || ||||| ||||||||| | |||||| |||| |||| | ||||||||||| |||||||||| | ||||| | |
|
|
| T |
15936890 |
catcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat |
15936791 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | ||||| |||| | ||| |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
15936790 |
taacaacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattat |
15936691 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat |
264 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||||||||| |||||| |
|
|
| T |
15936690 |
catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat |
15936634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 13 - 264
Target Start/End: Complemental strand, 15938729 - 15938476
Alignment:
| Q |
13 |
catcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaa |
112 |
Q |
| |
|
|||||||||||||| ||| |||| || ||||| ||||||||| | |||||| |||| |||| | ||||||||||| |||||||||| | ||||| | || |
|
|
| T |
15938729 |
catcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaattaa |
15938630 |
T |
 |
| Q |
113 |
ctacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattat |
210 |
Q |
| |
|
| ||||| | ||||| |||| | ||| |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| || |
|
|
| T |
15938629 |
caacaacttatcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcat |
15938530 |
T |
 |
| Q |
211 |
caattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat |
264 |
Q |
| |
|
||||||||| |||||||||||||| | |||||||||||| |||||| |||||| |
|
|
| T |
15938529 |
caattcatgattacaaacatatcattacagttggagcacgtatttagtaacaat |
15938476 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 13975853 - 13975722
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
||||||| |||||||||| |||||| ||| |||||||||||| ||| ||||||||||||||| | || | |||||||||||||||| ||||||||||| |
|
|
| T |
13975853 |
gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa |
13975755 |
T |
 |
| Q |
239 |
agttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |
|
|
| T |
13975754 |
agttggagcacgaatttagcaacaattatccat |
13975722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 271
Target Start/End: Original strand, 45860937 - 45861068
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
||||||| |||||||||| |||||| ||| |||||||||||| ||| ||||||||||||||| | || | |||||||||||||||| ||||||||||| |
|
|
| T |
45860937 |
gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa |
45861035 |
T |
 |
| Q |
239 |
agttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |
|
|
| T |
45861036 |
agttggagcacgaatttagcaacaattatccat |
45861068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 13955021 - 13954890
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
||||||| ||||||||| |||||| ||| |||||||||||| ||| ||||||||||||||| | || | |||||||||||||||| ||||||||||| |
|
|
| T |
13955021 |
gcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa |
13954923 |
T |
 |
| Q |
239 |
agttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |
|
|
| T |
13954922 |
agttggagcacgaatttagcaacaattatccat |
13954890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 209 - 300
Target Start/End: Original strand, 19231982 - 19232075
Alignment:
| Q |
209 |
atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
19231982 |
atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt |
19232075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 227
Target Start/End: Original strand, 15614838 - 15615053
Alignment:
| Q |
14 |
atcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac |
113 |
Q |
| |
|
|||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||||||| ||||||||| | | ||| | ||| |
|
|
| T |
15614838 |
atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaattaac |
15614937 |
T |
 |
| Q |
114 |
tacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc |
211 |
Q |
| |
|
| ||| | | ||||||| | ||| |||| || |||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||| |
|
|
| T |
15614938 |
aataacttagcaaaattcaccaattgagcaccatattcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatc |
15615037 |
T |
 |
| Q |
212 |
aattcatgcatacaaa |
227 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
15615038 |
aattcatgcatacaaa |
15615053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 16821139 - 16821369
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||| |||||||||| ||| | ||||||||||| ||||||||| |||| ||| | || ||| | ||||||||||| ||| |||||| | ||||| | |
|
|
| T |
16821139 |
catcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat |
16821238 |
T |
 |
| Q |
110 |
caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
|||| ||||| | | ||||||| | |||| ||||||| ||||| ||| ||||| ||||||||| |||||| ||| | ||||||||||||||| ||| |
|
|
| T |
16821239 |
caacaacaacttaggagaaattcaccaatttagcacaatactcatagcttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaatta |
16821338 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatca |
237 |
Q |
| |
|
| ||||||| ||||||||||||||| ||||| |
|
|
| T |
16821339 |
tcatcaatttatgcatacaaacataacatca |
16821369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 19260869 - 19260796
Alignment:
| Q |
225 |
aaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaa |
298 |
Q |
| |
|
||||||||||||| | || ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
19260869 |
aaacatatcatcataattagagcacgaatttagcaacaattatccataaaaaaaattcatacaacatttgaaaa |
19260796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 55316351 - 55316471
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| || ||||||||||||||||||||||| ||||| |
|
|
| T |
55316351 |
gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac |
55316450 |
T |
 |
| Q |
239 |
agttggagcacgaatttagca |
259 |
Q |
| |
|
|| |||||||||||||||| |
|
|
| T |
55316451 |
agcaagagcacgaatttagca |
55316471 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 41270207 - 41270327
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
||||||| |||||||||| |||||| | ||||| | |||||| ||| ||||||||||||||| || ||||||||||||||||||||||| ||||| |
|
|
| T |
41270207 |
gcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac |
41270306 |
T |
 |
| Q |
239 |
agttggagcacgaatttagca |
259 |
Q |
| |
|
|| |||||||||||||||| |
|
|
| T |
41270307 |
agcaagagcacgaatttagca |
41270327 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 47984650 - 47984759
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| ||||||||| ||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||| | |||||| |
|
|
| T |
47984650 |
catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc |
47984749 |
T |
 |
| Q |
110 |
caactacaac |
119 |
Q |
| |
|
|||| ||||| |
|
|
| T |
47984750 |
caacaacaac |
47984759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 48003224 - 48003333
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| ||||||||| ||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||| | |||||| |
|
|
| T |
48003224 |
catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc |
48003323 |
T |
 |
| Q |
110 |
caactacaac |
119 |
Q |
| |
|
|||| ||||| |
|
|
| T |
48003324 |
caacaacaac |
48003333 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 14080715 - 14080756
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
14080715 |
ttcatgcatacaaacatatcatcatagttggagcacgaattt |
14080756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 47993937 - 47994046
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| ||||||||| ||||||||||||| | || ||| |||| || ||| ||||||||||| ||| |||||| | |||||| |
|
|
| T |
47993937 |
catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc |
47994036 |
T |
 |
| Q |
110 |
caactacaac |
119 |
Q |
| |
|
|||| ||||| |
|
|
| T |
47994037 |
caacaacaac |
47994046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 48012510 - 48012619
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| ||||||||| ||||||||||||| | || ||| |||| || ||| ||||||||||| ||| |||||| | |||||| |
|
|
| T |
48012510 |
catcatcaattcatgaatatgcatacccaagtcatgattcatcaacaacaaaatcaattaacaacaaaaacatcaattgaacatgaatcacatctcaatc |
48012609 |
T |
 |
| Q |
110 |
caactacaac |
119 |
Q |
| |
|
|||| ||||| |
|
|
| T |
48012610 |
caacaacaac |
48012619 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 15468596 - 15468520
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaat |
86 |
Q |
| |
|
|||||||||| |||||| ||| |||||||||||||||||||| || |||||||| ||| || |||||||||||| |
|
|
| T |
15468596 |
catcatcaattcatgaatatgcatacccaagcaatgattcattcacaataacatcagttaacaataacaacatcaat |
15468520 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 11986245 - 11986173
Alignment:
| Q |
192 |
acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat |
264 |
Q |
| |
|
||||||||||| |||| || || ||||||| || || ||| ||||| |||| ||||||||||||| ||||||| |
|
|
| T |
11986245 |
acaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaat |
11986173 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 22275209 - 22275285
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaat |
86 |
Q |
| |
|
|||||||||| |||||| ||| ||||| |||||||||||||| || |||||||| ||| || |||||||||||| |
|
|
| T |
22275209 |
catcatcaattcatgaatatgcatacctaagcaatgattcattcacaataacatcagttaacaataacaacatcaat |
22275285 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 54651642 - 54651714
Alignment:
| Q |
192 |
acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat |
264 |
Q |
| |
|
||||||||||| |||| ||||||||||||| | || ||| ||||| || ||||||||||||||||||||| |
|
|
| T |
54651642 |
acaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaat |
54651714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 21)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 22907476 - 22907214
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22907476 |
catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
22907377 |
T |
 |
| Q |
110 |
caactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt |
208 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| ||||| |
|
|
| T |
22907376 |
caactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattatt |
22907277 |
T |
 |
| Q |
209 |
atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
22907276 |
atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
22907214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 9 - 300
Target Start/End: Complemental strand, 16193980 - 16193687
Alignment:
| Q |
9 |
acatcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat |
108 |
Q |
| |
|
||||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||| | ||||| |
|
|
| T |
16193980 |
acatcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaa |
16193881 |
T |
 |
| Q |
109 |
tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
| ||| |||| || |||| |||| | ||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||||||| ||| |
|
|
| T |
16193880 |
ttaacaacaatttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaatta |
16193781 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
16193780 |
tcatcaattcatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataagcaaaattcatacaatatttgaaaatt |
16193687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 5238184 - 5238350
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
5238184 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
5238283 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
5238284 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
5238350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 24661414 - 24661248
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
24661414 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
24661315 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
24661314 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
24661248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 43685643 - 43685809
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
43685643 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
43685742 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
43685743 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
43685809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 21 - 300
Target Start/End: Complemental strand, 24929043 - 24928762
Alignment:
| Q |
21 |
catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca |
120 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||| | |||||| |||| || | | ||| ||||||| |||||| |||| |||||| |||| ||||| |
|
|
| T |
24929043 |
catgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacaaccataacctcaattgaacaagagacataactcaatccaaccacaact |
24928944 |
T |
 |
| Q |
121 |
tgtc-aaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat |
218 |
Q |
| |
|
| | ||||||| | ||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||| |
|
|
| T |
24928943 |
tagcgaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat |
24928844 |
T |
 |
| Q |
219 |
gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
24928843 |
gcatacaaacatataatcacagttggagcacgaatttagcaacaattatccataatcaaaattcatacaacatttgaaaatt |
24928762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 10 - 300
Target Start/End: Complemental strand, 16405235 - 16404944
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| || ||||||||||| |||||||||||||| |||||| |||| || ||| ||||||||||| |||||||||||| |||||| |
|
|
| T |
16405235 |
catcatcaattcatgaatttgcatacccaagcagtgattcatcaactaaaacatcaattaacaacaataacatcaattgaacaagaatcatatgtcaatt |
16405136 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||| | |||| |||| | ||| |||||||||||| ||||| ||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
16405135 |
taac---aacttagcaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat |
16405039 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
16405038 |
catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaataattatccatcatgcaaaaattcatacaacatttgaaaatt |
16404944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 10 - 297
Target Start/End: Complemental strand, 43373731 - 43373440
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| ||||||||||||| |||||||||| | |||||| |||| || | | | ||||||||| |||||||||| | ||||| | |
|
|
| T |
43373731 |
catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccatagcatcaattgaacaagaatcaaatctcaaat |
43373632 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | |||| |
|
|
| T |
43373631 |
taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattat |
43373532 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa |
297 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||||||||||||| ||| |||||| || |||||||||||||||||||||| |
|
|
| T |
43373531 |
catcaattcatgcatacaaacgtatcatcacagttggagcacgaatttagcattaattatccattatacaaaaattcatacaacatttgaaa |
43373440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 21 - 271
Target Start/End: Original strand, 17345581 - 17345832
Alignment:
| Q |
21 |
catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca |
120 |
Q |
| |
|
|||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| || ||||| || |||||||||||| ||||||||| | | ||| |
|
|
| T |
17345581 |
catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataatatcaactgaacaagaatcataactcaattca-caataact |
17345679 |
T |
 |
| Q |
121 |
tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat |
218 |
Q |
| |
|
| |||| || ||| ||| ||||||||||||||||||| ||||| |||||| || |||||| || | ||||||||||||||| |||| |||||||||| |
|
|
| T |
17345680 |
tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat |
17345779 |
T |
 |
| Q |
219 |
gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
||||| ||||||| ||||| |||| |||||||||||| |||||||| |||||| |
|
|
| T |
17345780 |
gcatataaacataacatcacagttagagcacgaatttcgcaacaattatccat |
17345832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 6774505 - 6774258
Alignment:
| Q |
14 |
atcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac |
113 |
Q |
| |
|
|||||| |||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| ||||||||||| ||||||||| | ||||| | ||| |
|
|
| T |
6774505 |
atcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaac |
6774406 |
T |
 |
| Q |
114 |
tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc |
211 |
Q |
| |
|
| ||| | |||| |||| | ||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||| |
|
|
| T |
6774405 |
aataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc |
6774306 |
T |
 |
| Q |
212 |
aattcatgcatacaaacatatcatcaaagttggagcacgaatttagca |
259 |
Q |
| |
|
|||||||||||||||||||| ||||| ||| |||||||||| ||||| |
|
|
| T |
6774305 |
aattcatgcatacaaacataacatcacagtaagagcacgaatctagca |
6774258 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 24548986 - 24549233
Alignment:
| Q |
14 |
atcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac |
113 |
Q |
| |
|
|||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||||||| ||||||||| | | ||| | ||| |
|
|
| T |
24548986 |
atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatcccaaattaac |
24549085 |
T |
 |
| Q |
114 |
tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc |
211 |
Q |
| |
|
| ||| | |||| |||| | ||| |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||| |
|
|
| T |
24549086 |
aataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc |
24549185 |
T |
 |
| Q |
212 |
aattcatgcatacaaacatatcatcaaagttggagcacgaatttagca |
259 |
Q |
| |
|
|||||||||||||||||||| ||||| ||| |||||||||| ||||| |
|
|
| T |
24549186 |
aattcatgcatacaaacataacatcacagtaagagcacgaatctagca |
24549233 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 255
Target Start/End: Complemental strand, 21844692 - 21844576
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| ||||| |
|
|
| T |
21844692 |
gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac |
21844593 |
T |
 |
| Q |
239 |
agttggagcacgaattt |
255 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
21844592 |
agcaagagcacgaattt |
21844576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 255
Target Start/End: Complemental strand, 21852217 - 21851969
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||| ||||| ||||| ||| | ||||||||||| ||||||||| |||| ||| | || ||| | ||||||| ||| |||||||||| | ||||| | |
|
|
| T |
21852217 |
catcaacaatcaatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacatctcaaat |
21852118 |
T |
 |
| Q |
110 |
caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | | ||||||| | ||| ||||||| |||||||||| |||||| ||||||||||||||| ||| | ||||||||||||||| | | |
|
|
| T |
21852117 |
taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatca |
21852018 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
| ||||||||||||||||||||||| ||||| || |||||||||||| |
|
|
| T |
21852017 |
tcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt |
21851969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 259
Target Start/End: Original strand, 30120722 - 30120974
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||| ||||| ||| | ||||||||||| ||||||||| |||| ||| | || ||| | ||||||||||| ||| |||||| | ||||| | |
|
|
| T |
30120722 |
catcatcaatcgatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat |
30120821 |
T |
 |
| Q |
110 |
caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | | ||||||| | ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| || |
|
|
| T |
30120822 |
taacaacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta |
30120921 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca |
259 |
Q |
| |
|
|| |||||||||||||||||||| ||||| || |||||||||||||||| |
|
|
| T |
30120922 |
acataaattcatgcatacaaacataacatcacagcaagagcacgaatttagca |
30120974 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 16674512 - 16674392
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| || || |||||||||||| ||||||| ||||| |
|
|
| T |
16674512 |
gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcac |
16674413 |
T |
 |
| Q |
239 |
agttggagcacgaatttagca |
259 |
Q |
| |
|
|| |||||||||||||||| |
|
|
| T |
16674412 |
agaaagagcacgaatttagca |
16674392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 222943 - 222754
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| ||||||||| |||| ||| | || ||| | ||||||| ||| |||||||||| | ||||| | |
|
|
| T |
222943 |
catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat |
222844 |
T |
 |
| Q |
110 |
caactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat |
196 |
Q |
| |
|
||| ||||| | | ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |
|
|
| T |
222843 |
taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat |
222754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 736566 - 736377
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| ||||||||| |||| ||| | || ||| | ||||||| ||| |||||||||| | ||||| | |
|
|
| T |
736566 |
catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat |
736467 |
T |
 |
| Q |
110 |
caactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat |
196 |
Q |
| |
|
||| ||||| | | ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |
|
|
| T |
736466 |
taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat |
736377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 860461 - 860272
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| ||||||||| |||| ||| | || ||| | ||||||| ||| |||||||||| | ||||| | |
|
|
| T |
860461 |
catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat |
860362 |
T |
 |
| Q |
110 |
caactacaac--atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaat |
196 |
Q |
| |
|
||| ||||| | | ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| |
|
|
| T |
860361 |
taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat |
860272 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 23837219 - 23837308
Alignment:
| Q |
32 |
atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat |
121 |
Q |
| |
|
|||||||||| |||| |||||||| | |||||| |||||| ||||||||||||||| ||| || || || | ||||||||| ||||||| |
|
|
| T |
23837219 |
atacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacat |
23837308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 23149985 - 23150026
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
||||||||| |||||||||||||| | ||||||||||||||| |
|
|
| T |
23149985 |
ttcatgcattcaaacatatcatcataattggagcacgaattt |
23150026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 23226117 - 23226076
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||| ||||| |
|
|
| T |
23226117 |
ttcatgcatacaaacatatcatcatagttagagcacaaattt |
23226076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 21)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 10 - 271
Target Start/End: Original strand, 26680201 - 26680463
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26680201 |
catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
26680300 |
T |
 |
| Q |
110 |
caactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt |
208 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||||||||||||| |||||| |||||||||||||||| ||| ||||||||||||||||| ||||| |
|
|
| T |
26680301 |
caactacaacatgtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattatt |
26680400 |
T |
 |
| Q |
209 |
atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26680401 |
atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
26680463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 10 - 298
Target Start/End: Complemental strand, 15675352 - 15675060
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||| |
|
|
| T |
15675352 |
catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt |
15675253 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|||| ||||| | |||| |||| | ||| |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
15675252 |
caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat |
15675153 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaa |
298 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||| |
|
|
| T |
15675152 |
catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaa |
15675060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 10488659 - 10488825
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||| | |
|
|
| T |
10488659 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat |
10488758 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10488759 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
10488825 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 16328092 - 16327926
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||| | |
|
|
| T |
16328092 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat |
16327993 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
16327992 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
16327926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 300
Target Start/End: Complemental strand, 54118507 - 54118213
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| || ||| |
|
|
| T |
54118507 |
catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaactataacatcaattgaacaagaatcataactaaatc |
54118408 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| ||||| ||| || | | ||||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
54118407 |
taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcatacaattat |
54118308 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
54118307 |
catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt |
54118213 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 10 - 300
Target Start/End: Original strand, 13246430 - 13246724
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| |||||| |
|
|
| T |
13246430 |
catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatc |
13246529 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
13246530 |
taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat |
13246629 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
|| |||||||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
13246630 |
cattaattcatgcatacaaacatatcatcacagttgtagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatt |
13246724 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 139 - 300
Target Start/End: Original strand, 122020 - 122181
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
|||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
122020 |
gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac |
122119 |
T |
 |
| Q |
239 |
agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
122120 |
agttggagcacaaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatt |
122181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 244
Target Start/End: Original strand, 31115629 - 31115865
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||| |
|
|
| T |
31115629 |
catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt |
31115728 |
T |
 |
| Q |
110 |
caactacaacat-gtcaaattcatccatt-tgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|||| ||||| | | ||||||| | ||| ||| |||||||| |||||| ||||| |||||| | |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
31115729 |
caacaacaacttaggaaaattcaccaattgagcataattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaattat |
31115828 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttgg |
244 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |
|
|
| T |
31115829 |
catcaattcatgcatacaaacatatcatcacagttgg |
31115865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 74 - 298
Target Start/End: Complemental strand, 10104449 - 10104221
Alignment:
| Q |
74 |
caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatat |
171 |
Q |
| |
|
||||||||||||||| ||| |||||||| ||||||||||| ||||| | |||| |||| | ||| |||||||||||| |||||| ||||| |||||| |
|
|
| T |
10104449 |
caacaacatcaattgaacatgaatcatatctcaattcaacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataa |
10104350 |
T |
 |
| Q |
172 |
ttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca- |
270 |
Q |
| |
|
|| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||| |
|
|
| T |
10104349 |
ttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacggatttagcaacaattatccaa |
10104250 |
T |
 |
| Q |
271 |
-taatcaaaattcatacaacatttgaaaa |
298 |
Q |
| |
|
|| ||||||||||| ||||||||||| |
|
|
| T |
10104249 |
ttatgaaaaattcataccacatttgaaaa |
10104221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 13048353 - 13048221
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
||||||| |||||||||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || ||||| ||||||||||||||||||||| | |
|
|
| T |
13048353 |
gcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcatacaaacatatcattga |
13048254 |
T |
 |
| Q |
239 |
agttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||| |
|
|
| T |
13048253 |
agttggagcatgaatttagcaacaattatccat |
13048221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 255
Target Start/End: Original strand, 10644219 - 10644467
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||||| ||||||||| |||| ||| | || ||| | ||||||||||| ||| |||||| | ||||| | |
|
|
| T |
10644219 |
catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat |
10644318 |
T |
 |
| Q |
110 |
caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
|||| ||||| | | ||||||| | |||| ||||||| ||||||||| ||||| ||||||||| |||||| ||| | || |||||||||||| ||| |
|
|
| T |
10644319 |
caacaacaacttaggagaaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaatta |
10644418 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
| ||||||||||||||||||||||| ||||| || |||||||||||| |
|
|
| T |
10644419 |
tcatcaattcatgcatacaaacataacatcacagcaagagcacgaattt |
10644467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 33240901 - 33240992
Alignment:
| Q |
209 |
atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaa |
298 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||| |
|
|
| T |
33240901 |
atcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaa |
33240992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 259
Target Start/End: Original strand, 47357654 - 47357906
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| || |||||||| |||| ||||||||| |||| ||| | || ||| | ||||||| ||| |||||||||| | ||||| | |
|
|
| T |
47357654 |
catcatcaatccatgaatatacatacccaatcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat |
47357753 |
T |
 |
| Q |
110 |
caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | | ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| ||||| || |
|
|
| T |
47357754 |
taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta |
47357853 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca |
259 |
Q |
| |
|
|||||| |||||||||||||||| ||||| || |||||||||||||||| |
|
|
| T |
47357854 |
acatcaatccatgcatacaaacataacatcacagcaagagcacgaatttagca |
47357906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 111395 - 111493
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat |
108 |
Q |
| |
|
|||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| |||||| |
|
|
| T |
111395 |
catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaat |
111493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 255
Target Start/End: Complemental strand, 40885753 - 40885570
Alignment:
| Q |
74 |
caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacata- |
170 |
Q |
| |
|
||||||||||||||| ||| |||||||| ||||||||||| | ||| | |||| |||| | ||| ||| ||||| |||||||| ||||| |||||| |
|
|
| T |
40885753 |
caacaacatcaattgaacatgaatcatatctcaattcaacaataacttagcaaagttcaccaattgagcataattt-cataacttgacatttatacatac |
40885655 |
T |
 |
| Q |
171 |
tttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
||| |||||| ||| | |||||||| ||| || |||| | ||||||||||||||||||||| || || |||||||| |||||||| |
|
|
| T |
40885654 |
tttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttggagtacgaattt |
40885570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 10104494 - 10104449
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaac |
55 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
10104494 |
catcatcaattcatgaatatgtatacccaagcaatgattcatcaac |
10104449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 41166172 - 41166083
Alignment:
| Q |
32 |
atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat |
121 |
Q |
| |
|
|||||||||| ||||||||||||| | |||||| |||||| ||||||||||||||| ||| || || | | ||||||||| ||||||| |
|
|
| T |
41166172 |
atacccaagccatgattcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacat |
41166083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 7186068 - 7185981
Alignment:
| Q |
34 |
acccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat |
121 |
Q |
| |
|
|||||||| |||| |||||||| |||| |||| |||||| |||||||||||||| ||| ||||| | | ||||||||| ||||||| |
|
|
| T |
7186068 |
acccaagccatgaatcatcaacaataatatctcttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacat |
7185981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 15044851 - 15044938
Alignment:
| Q |
34 |
acccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat |
121 |
Q |
| |
|
|||||||| |||| |||||| | | |||||| |||||| ||||||||||||||| ||| ||||| || | ||||||||| ||||||| |
|
|
| T |
15044851 |
acccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat |
15044938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 31132545 - 31132606
Alignment:
| Q |
239 |
agttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaa |
298 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||| |
|
|
| T |
31132545 |
agttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaa |
31132606 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 13809551 - 13809511
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaatt |
254 |
Q |
| |
|
||||||||| |||||||||||||| | |||||||||||||| |
|
|
| T |
13809551 |
ttcatgcattcaaacatatcatcataattggagcacgaatt |
13809511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0078 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: scaffold0078
Description:
Target: scaffold0078; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 37328 - 37066
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37328 |
catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatc |
37229 |
T |
 |
| Q |
110 |
caactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt |
208 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||| ||||| |
|
|
| T |
37228 |
caactacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattatt |
37129 |
T |
 |
| Q |
209 |
atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37128 |
atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
37066 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 21)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 10 - 271
Target Start/End: Original strand, 7293017 - 7293279
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7293017 |
catcatcaatccatgaatatgtatacccaagcaatgattcatcaactacaacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
7293116 |
T |
 |
| Q |
110 |
caactacaacatgtcaaattcatcca-tttgcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatt |
208 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| ||||| |
|
|
| T |
7293117 |
caacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattatt |
7293216 |
T |
 |
| Q |
209 |
atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
7293217 |
attaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
7293279 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 11516324 - 11516490
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
11516324 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
11516423 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
11516424 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
11516490 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 15441730 - 15441564
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
15441730 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
15441631 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
15441630 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
15441564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 30262295 - 30262129
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
30262295 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
30262196 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
30262195 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
30262129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 15 - 300
Target Start/End: Complemental strand, 11580997 - 11580707
Alignment:
| Q |
15 |
tcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaact |
114 |
Q |
| |
|
||||| |||||| |||||||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| |||||| ||| |
|
|
| T |
11580997 |
tcaattcatgaatatgtatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaaca |
11580898 |
T |
 |
| Q |
115 |
acaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatca |
212 |
Q |
| |
|
||||| | |||| |||| | ||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||| |
|
|
| T |
11580897 |
acaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatca |
11580798 |
T |
 |
| Q |
213 |
attcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat---caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||||||||||||||| ||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
11580797 |
attcatgcatacaaacatattatcacagttggagcacgaatttagcaataattatccattatgcaaaaaattcatacaacatttgaaaatt |
11580707 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 12 - 297
Target Start/End: Original strand, 16211768 - 16212055
Alignment:
| Q |
12 |
tcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattca |
111 |
Q |
| |
|
|||| ||| |||||| ||| ||||||||||||||| |||||||| | |||||| |||| || | | |||||||||| |||||||||| | ||||| | | |
|
|
| T |
16211768 |
tcattaattcatgaatatgcatacccaagcaatgaatcatcaaccacaacatcaattaacaaccataacatcaatttaacaagaatcaaatctcaaatta |
16211867 |
T |
 |
| Q |
112 |
actacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatta |
209 |
Q |
| |
|
|| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | || ||||||| |||| |||| | |
|
|
| T |
16211868 |
acaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatca |
16211967 |
T |
 |
| Q |
210 |
tcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaa |
297 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
16211968 |
tcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattgtccataagcaaaattcatacaacatttgaaa |
16212055 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 47481294 - 47481031
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| | | | ||||||||||| |||||||||||| ||||||| |
|
|
| T |
47481294 |
catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaaaaacatcaattaagagcgataacatcaattgaacaagaatcataactcaatt |
47481195 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
|||| ||||| | |||| |||| ||| ||| ||||||||||| ||||| |||||| ||||||||| |||||| ||| | || |||||||||||| ||| |
|
|
| T |
47481194 |
caacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaatta |
47481096 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| |||||| |
|
|
| T |
47481095 |
tcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat |
47481031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 10 - 300
Target Start/End: Complemental strand, 13037277 - 13036983
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | ||||| ||||| |||||||||||| |||||| |
|
|
| T |
13037277 |
catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatattcataacattaattgaacaagaatcataactcaatc |
13037178 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| |||| |
|
|
| T |
13037177 |
taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattat |
13037078 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
13037077 |
catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt |
13036983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 10 - 300
Target Start/End: Original strand, 3059966 - 3060258
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | ||||||||||| |||||||||||| |||||| |
|
|
| T |
3059966 |
catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatc |
3060065 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | |||| |||| ||||||| || |||||||| || || |||||| ||||||||| |||||| ||| | ||||||| | |||| ||| |
|
|
| T |
3060066 |
taacaacaacttaacaaaattca-ccatttgagcataattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaatta |
3060164 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
| ||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| |
|
|
| T |
3060165 |
tcatcaattaatgcatacaaatatattatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatataacatttgaaaatt |
3060258 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 10 - 297
Target Start/End: Original strand, 36052667 - 36052955
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| ||||||||||||| |||||||||| | |||||| |||| || | ||||||||||||| |||||||||| | ||||| | |
|
|
| T |
36052667 |
catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccacaacatcaattgaacaagaatcaaatctcaaat |
36052766 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||| | |||| |||| | ||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||| | |||| |
|
|
| T |
36052767 |
taac---aacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattat |
36052863 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa |
297 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||| | |||||||||||||| |||||| || |||||||||||||||||||||| |
|
|
| T |
36052864 |
catcaattcatgcatacaaacgtatcatcacagttggagtataaatttagcaacaattatccattatacaaaaattcatacaacatttgaaa |
36052955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 10 - 264
Target Start/End: Complemental strand, 18254098 - 18253842
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| |||| || ||||| ||||||||| | |||||| |||| |||| | ||||||||||| |||||||||| | ||||| | |
|
|
| T |
18254098 |
catcatcaatccatgaatatgcatactcaggcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat |
18253999 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
18253998 |
taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattat |
18253899 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat |
264 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||||||||| |||||| |
|
|
| T |
18253898 |
catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat |
18253842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 10 - 270
Target Start/End: Original strand, 13321014 - 13321278
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| || | ||||||| ||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||| |
|
|
| T |
13321014 |
catcatcaattcatgaatgtgcaaacccaagtcatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt |
13321113 |
T |
 |
| Q |
110 |
caacta-caacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||| | |||| | |||| |||| | ||| ||||||||| |||||||| ||||| |||||| || ||||||| ||| | ||||||||||||||| | |
|
|
| T |
13321114 |
caacaatcaacttagcaaaattcaccaattgagcacaattt-cataacttgacatttatacatactttgaaacatgtaatttcaccaacaatcatacaat |
13321212 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca |
270 |
Q |
| |
|
||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| ||||| |
|
|
| T |
13321213 |
tatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatcca |
13321278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 10 - 253
Target Start/End: Complemental strand, 16479213 - 16478968
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| ||||||||||| ||||||||| | ||||| | |
|
|
| T |
16479213 |
catcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaat |
16479114 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|| | ||| | |||| |||| | ||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
16479113 |
taaaaataacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat |
16479014 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaat |
253 |
Q |
| |
|
||||||||||||||||||||||| |||| ||| |||||||||| |
|
|
| T |
16479013 |
catcaattcatgcatacaaacataacatcgcagtaagagcacgaat |
16478968 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 25292470 - 25292338
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
||||||| |||||| ||| || ||| |||||||||||||||| ||| | ||||||||||||||| | || | |||||||| ||||||||||||||||||| |
|
|
| T |
25292470 |
gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaa |
25292371 |
T |
 |
| Q |
239 |
agttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
||||||||||| |||||||||||||| |||||| |
|
|
| T |
25292370 |
agttggagcacaaatttagcaacaattatccat |
25292338 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 255
Target Start/End: Original strand, 13572808 - 13572924
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||| ||| | || ||||||||||||||||||||||| ||||| |
|
|
| T |
13572808 |
gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatcac |
13572907 |
T |
 |
| Q |
239 |
agttggagcacgaattt |
255 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
13572908 |
agcaagagcacgaattt |
13572924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 259
Target Start/End: Complemental strand, 13911277 - 13911024
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| | ||||||| ||| ||||||||| |||| ||| | || ||| | ||||||||||| ||| |||||| | ||||| | |
|
|
| T |
13911277 |
catcatcaatccatgaatatgcaaacccaagaaattattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat |
13911178 |
T |
 |
| Q |
110 |
caactacaacat---gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt |
205 |
Q |
| |
|
|||| ||||| | | ||||||| | ||| ||| ||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| || |
|
|
| T |
13911177 |
caacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaatt |
13911078 |
T |
 |
| Q |
206 |
attatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca |
259 |
Q |
| |
|
| ||||||||||||||||||||||| ||||| | |||||||||||||||| |
|
|
| T |
13911077 |
aacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagca |
13911024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 259
Target Start/End: Original strand, 10989410 - 10989661
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||||| ||||||||| |||| ||| | || ||| | ||||||| ||| |||||||||| | ||||| | |
|
|
| T |
10989410 |
catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat |
10989509 |
T |
 |
| Q |
110 |
caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
| | ||||| | | ||||||| | ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| || |
|
|
| T |
10989510 |
ta-caacaacttaggagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta |
10989608 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||| || |||||||||||||||| |
|
|
| T |
10989609 |
acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca |
10989661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 2437590 - 2437710
Alignment:
| Q |
140 |
cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaa |
239 |
Q |
| |
|
|||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| || ||||||||||||||||||||||| ||||| | |
|
|
| T |
2437590 |
cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcaca |
2437689 |
T |
 |
| Q |
240 |
gttggagcacgaatttagcaa |
260 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
2437690 |
acaagagcacgaatttagcaa |
2437710 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 299
Target Start/End: Complemental strand, 296094 - 295936
Alignment:
| Q |
143 |
aattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagtt |
242 |
Q |
| |
|
|||||| |||||||||||||| |||||| || |||||| ||| | ||||||||||||| |||| ||| ||||||||| ||||||||| || | | || |
|
|
| T |
296094 |
aatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaatt |
295995 |
T |
 |
| Q |
243 |
ggagcacgaatttagcaacaatcatccataat-caaaa-ttcatacaacatttgaaaat |
299 |
Q |
| |
|
|| |||||||||||||||||| || ||| || ||||| ||||||||| ||||||||| |
|
|
| T |
295994 |
agaacacgaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaat |
295936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 14114031 - 14113989
Alignment:
| Q |
229 |
atatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14114031 |
atatcatcaaagttggagcacgaatttagcaacaattatccat |
14113989 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 14423681 - 14423639
Alignment:
| Q |
229 |
atatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14423681 |
atatcatcaaagttggagcacgaatttagcaacaattatccat |
14423639 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0195 (Bit Score: 136; Significance: 6e-71; HSPs: 2)
Name: scaffold0195
Description:
Target: scaffold0195; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 10 - 300
Target Start/End: Original strand, 19206 - 19500
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||| |
|
|
| T |
19206 |
catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaatt |
19305 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |
|
|
| T |
19306 |
caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattat |
19405 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
19406 |
catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt |
19500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0195; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 10 - 271
Target Start/End: Original strand, 21290 - 21553
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||| |
|
|
| T |
21290 |
catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacaggaatcataactcaatt |
21389 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |
|
|
| T |
21390 |
caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattat |
21489 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
21490 |
catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat |
21553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 133; Significance: 4e-69; HSPs: 16)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 10 - 297
Target Start/End: Complemental strand, 19794967 - 19794676
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||| | || ||||||||||| |||||||||||| ||||||| |
|
|
| T |
19794967 |
catcatcaatccatgaatatgcatacccaagcaatgattcatcaactataacatcaattaacggaaataacatcaattgaacaagaatcataactcaatt |
19794868 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
19794867 |
caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat |
19794768 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa |
297 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| |||||| || |||||||||||||||||||||| |
|
|
| T |
19794767 |
tatcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacgacaattatccattatgcaaaaattcatacaacatttgaaa |
19794676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 300
Target Start/End: Complemental strand, 36982704 - 36982410
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| |||||||| ||||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||| |
|
|
| T |
36982704 |
catcatcaattcatgaatatgcatacccaaacaatgattcatcaacaacaacatcaattaacaacaataacatcaattgaacaggaatcataactcaatt |
36982605 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|||| ||||| || |||| |||| | ||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||| ||||| |||| |||| |
|
|
| T |
36982604 |
caacaacaacttggcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaattat |
36982505 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
36982504 |
catcaattcatgaatacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt |
36982410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 19689567 - 19689401
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
19689567 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
19689468 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
19689467 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
19689401 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 23820168 - 23820334
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
23820168 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
23820267 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
23820268 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
23820334 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 14906606 - 14906440
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||| | |
|
|
| T |
14906606 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat |
14906507 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14906506 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
14906440 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 15 - 300
Target Start/End: Original strand, 462743 - 463030
Alignment:
| Q |
15 |
tcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaact |
114 |
Q |
| |
|
||||| |||||| ||| ||||||||||||||||||||||| | ||||| |||| || | | ||||||||||| |||||||||||| |||||| ||| |
|
|
| T |
462743 |
tcaattcatgaatatgcatacccaagcaatgattcatcaatcacgacatcaattaacagccataacatcaattgaacaagaatcataactcaatctaaca |
462842 |
T |
 |
| Q |
115 |
acaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc |
211 |
Q |
| |
|
||||| | |||| |||| ||| ||| ||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| ||| |
|
|
| T |
462843 |
acaacttagcaaaattca-ccaattgaacacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatc |
462941 |
T |
 |
| Q |
212 |
aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
462942 |
aattcatgcatacaaatatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatt |
463030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 20015108 - 20015274
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||| ||| | |
|
|
| T |
20015108 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaat |
20015207 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
20015208 |
tattatcaattcatgcatgcaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
20015274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 10 - 298
Target Start/End: Complemental strand, 24341652 - 24341360
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||||||||||||| |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||| |
|
|
| T |
24341652 |
catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaggaacatcaattaacaacaataacatcaattgaacatgaatcatatctcaatt |
24341553 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|||| ||||| | |||| |||| | ||| |||||||||||| |||||| ||||| |||||| || ||||| ||| | ||||||||||||||| |||| |
|
|
| T |
24341552 |
caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaattat |
24341453 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaa |
298 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| ||||| || ||||||||||| ||||||||||| |
|
|
| T |
24341452 |
catcaattcatgcatacaaacatatcatcacagttgaagcatgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaa |
24341360 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 10 - 300
Target Start/End: Original strand, 8891242 - 8891536
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||| ||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| | | | ||||||||||| |||||||||||| |||||| |
|
|
| T |
8891242 |
catcctcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaatc |
8891341 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||||||||||||| |||| |
|
|
| T |
8891342 |
taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattat |
8891441 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
8891442 |
catcaattcatgcatacaaacatattatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt |
8891536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 10 - 300
Target Start/End: Complemental strand, 43643220 - 43642926
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| ||||||||||| |||||||||||||| |||||| |||| || ||| | ||||||||| |||||||||||| ||||| | |
|
|
| T |
43643220 |
catcatcaattcatgaatatgcatacccaagcagtgattcatcaactacaacatcaattaacagcaatagcatcaattgaacaagaatcatatctcaaat |
43643121 |
T |
 |
| Q |
110 |
caactacaac-atgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|| ||||| | | ||||||| | ||| |||||||||||| ||||| ||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
43643120 |
taataacaactaagaaaaattcaccaattgagcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat |
43643021 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||| |||||||||||||| ||||| || ||||||||||||||||||||||||| |
|
|
| T |
43643020 |
catcaattcatgcatacaaacatatcatcacaattggagcacaaatttagcaacaattatccactatgcaaaaattcatacaacatttgaaaatt |
43642926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 10 - 300
Target Start/End: Complemental strand, 20627576 - 20627284
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||| ||||| |||||| || |||||||||||||||||||||||| | |||| | |||| || | | || |||||||| |||||||| | | ||||| | |
|
|
| T |
20627576 |
catcctcaattcatgaatatccatacccaagcaatgattcatcaaccacaacaccaattaacaaccataaaatcaattgaacaagaattaaatctcaaat |
20627477 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| || || |||||| ||||||||| ||||| ||| | ||||||||||||||| |||| |
|
|
| T |
20627476 |
taacaacaacttaacaaaattcaccaattgagcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattat |
20627377 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
20627376 |
catcaattcgtgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccataatcataattcatacaatatttgaaaatt |
20627284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 25265653 - 25265390
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| |||||||||| ||||||||| ||| | |||||| |||| || ||||||||||||||| ||| | || | | |||| |
|
|
| T |
25265653 |
catcatcaattcatgaatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt |
25265554 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|||| ||||||| |||| |||| | ||| |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
25265553 |
caacaacaacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat |
25265454 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
25265453 |
catcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat |
25265390 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 17396784 - 17396653
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
||||||| |||||||||| |||||| ||| |||||||||||| ||| | ||||||||||||||| | || | |||||||||||||| ||||||||||||| |
|
|
| T |
17396784 |
gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatac-aacatatcatcaa |
17396686 |
T |
 |
| Q |
239 |
agttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |
|
|
| T |
17396685 |
agttggagcacgaatttagcaacaattatccat |
17396653 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 7508107 - 7507894
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgca-caagaatcatagctcaat |
108 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| |||||||||| | || |||||||| |||||| |
|
|
| T |
7508107 |
catcatcaatccatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaat |
7508008 |
T |
 |
| Q |
109 |
tcaactacaacat-gtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt |
205 |
Q |
| |
|
| ||| ||||| | | |||||||| ||| ||| ||||||||||||||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| || |
|
|
| T |
7508007 |
t-aacaacaacttagccaaattca-ccaattgaacacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaatt |
7507910 |
T |
 |
| Q |
206 |
attatcaattcatgca |
221 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
7507909 |
atcatcaattcatgca |
7507894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 259
Target Start/End: Complemental strand, 19886913 - 19886661
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| ||||||||| |||| ||| | || ||| | ||||||| ||| |||||||||| | ||||| | |
|
|
| T |
19886913 |
catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat |
19886814 |
T |
 |
| Q |
110 |
caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | | ||||||| | ||| ||||||| |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| ||||| || |
|
|
| T |
19886813 |
taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaacta |
19886714 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||| || |||||||||||||||| |
|
|
| T |
19886713 |
acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca |
19886661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 19669335 - 19669279
Alignment:
| Q |
32 |
atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattg |
88 |
Q |
| |
|
|||||||||| |||| |||||||| |||||||| |||||| ||||||||||||||| |
|
|
| T |
19669335 |
atacccaagccatgaatcatcaacaataacatcacttagcaacaacaacatcaattg |
19669279 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0266 (Bit Score: 129; Significance: 9e-67; HSPs: 2)
Name: scaffold0266
Description:
Target: scaffold0266; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 10 - 300
Target Start/End: Original strand, 1124 - 1416
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| | ||||||||||| |||||||||| | || ||| |||| || | | ||||||||||| |||||||||| | ||||| | |
|
|
| T |
1124 |
catcatcaattcatgaatatgcacacccaagcaattattcatcaaccacaatatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat |
1223 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
1224 |
taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat |
1323 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
1324 |
tatcaattcatgcatactaacatatcatcaaagttggagcacgaatttagcaacaattatccataagaaaaattcatacaacatttgaaaatt |
1416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0266; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 12 - 300
Target Start/End: Complemental strand, 3843 - 3553
Alignment:
| Q |
12 |
tcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattca |
111 |
Q |
| |
|
|||||||||||| || ||| ||||||||||||| |||| |||| | |||||| |||| |||| | ||||||||||| |||||||||| | ||||| | | |
|
|
| T |
3843 |
tcatcaatccatcaatatgcatacccaagcaattattcctcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaatta |
3744 |
T |
 |
| Q |
112 |
actacaacatgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttatta |
209 |
Q |
| |
|
|| ||||| | |||| | ||| ||| ||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| | |
|
|
| T |
3743 |
acaacaacttagcaaaatttaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatca |
3644 |
T |
 |
| Q |
210 |
tcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||| |
|
|
| T |
3643 |
tcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatctataatcaaaattcatacaacttttgaaaatt |
3553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0175 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: scaffold0175
Description:
Target: scaffold0175; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 10 - 300
Target Start/End: Complemental strand, 1218 - 927
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| ||||||||| ||||||| |||| |||| | ||||||| ||| |||||||| | | ||||||| |
|
|
| T |
1218 |
catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacataaattaacatccataacatcacttgaacaagaataaaatctcaatt |
1119 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||||| ||| |||||||||||| ||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
1118 |
-aacaacaacttagcaaaattcatcaattgagcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattat |
1020 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||| |
|
|
| T |
1019 |
catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatt |
927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 127; Significance: 1e-65; HSPs: 27)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 20623066 - 20623232
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
20623066 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
20623165 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
20623166 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
20623232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 21233694 - 21233528
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
21233694 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
21233595 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
21233594 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
21233528 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 10 - 297
Target Start/End: Original strand, 23506965 - 23507254
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| ||||||||||||| |||||||||| | |||||| |||| || | | ||||||||||| |||||||||| | ||||| | |
|
|
| T |
23506965 |
catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat |
23507064 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
23507065 |
taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattat |
23507164 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaa |
297 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
23507165 |
catcaattcatgcatacaaacatatcatcacaaatggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaa |
23507254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 109 - 271
Target Start/End: Original strand, 37052844 - 37053007
Alignment:
| Q |
109 |
tcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| ||| ||||||||||||||||| |||| |
|
|
| T |
37052844 |
tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattat |
37052943 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37052944 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
37053007 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 10 - 298
Target Start/End: Complemental strand, 18531330 - 18531038
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| |||||||||| ||||||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||| |
|
|
| T |
18531330 |
catcatcaattcatgaatatgtatacccgagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaatt |
18531231 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
|||| ||||| | |||| |||| ||| ||| ||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||| |
|
|
| T |
18531230 |
caacaacaacttagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatta |
18531132 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc-ataatcaaa-attcatacaacatttgaaaa |
298 |
Q |
| |
|
| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| || || ||| |||||||| ||||||||||| |
|
|
| T |
18531131 |
tcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaacattcataccacatttgaaaa |
18531038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 16536294 - 16536460
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||| | |
|
|
| T |
16536294 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat |
16536393 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
16536394 |
tattataaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
16536460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 10 - 298
Target Start/End: Complemental strand, 22054096 - 22053804
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||||| |||||||||||||||||||||| | |||||| |||| || ||| ||||||||||| ||| |||||||| ||||||| |
|
|
| T |
22054096 |
catcatcaattcatgaatatgtagacccaagcaatgattcatcaacaacaacatcaattaacagcaataacatcaattgaacatgaatcatatctcaatt |
22053997 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|||| ||||| | |||| |||| | ||| |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||| |
|
|
| T |
22053996 |
caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaactat |
22053897 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca--taatcaaaattcatacaacatttgaaaa |
298 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||| |
|
|
| T |
22053896 |
catcaattcatacatacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatgaaaaattcataccacatttgaaaa |
22053804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 10 - 300
Target Start/End: Complemental strand, 27182810 - 27182516
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| |||| ||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| |||||| |
|
|
| T |
27182810 |
catcatcaattcatgaatatgcatactcaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaatc |
27182711 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| |||| |
|
|
| T |
27182710 |
taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattat |
27182611 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
27182610 |
catcagttcatgcatacaaacatatcatcacagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt |
27182516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 106 - 269
Target Start/End: Complemental strand, 25900571 - 25900408
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||| |||||||||||||||||| |||||| ||||||| |||||| ||| ||||||||||||||||| | |
|
|
| T |
25900571 |
aattcaacaacaacatgtcaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaat |
25900473 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc |
269 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
25900472 |
tatcatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatcc |
25900408 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 271
Target Start/End: Original strand, 34939289 - 34939540
Alignment:
| Q |
21 |
catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca |
120 |
Q |
| |
|
|||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| |||||||| || |||||||||||| ||||||||| | | || |
|
|
| T |
34939289 |
catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacagcaataacatcaactgaacaagaatcataactcaattca-caatgact |
34939387 |
T |
 |
| Q |
121 |
tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat |
218 |
Q |
| |
|
| |||| || ||| ||| ||||||||||||||||||| ||||| |||||| || |||||| || | ||||||||||||||| |||| |||||||||| |
|
|
| T |
34939388 |
tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat |
34939487 |
T |
 |
| Q |
219 |
gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
||||||||||||| ||||| |||| ||||||||||||||||||| | |||||| |
|
|
| T |
34939488 |
gcatacaaacataacatcacagttagagcacgaatttagcaacagttatccat |
34939540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 29188404 - 29188284
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
|||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |
|
|
| T |
29188404 |
gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac |
29188305 |
T |
 |
| Q |
239 |
agttggagcacgaatttagca |
259 |
Q |
| |
|
||| |||||||||| ||||| |
|
|
| T |
29188304 |
agtaagagcacgaatctagca |
29188284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 259
Target Start/End: Complemental strand, 4200237 - 4199985
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||| ||||||| ||| | ||||||||||| ||||||||| |||| ||| | || ||| | ||||||||||| ||| |||||| | ||||| | |
|
|
| T |
4200237 |
catcatcaacccatgaatatgcaaacccaagcaatcattcatcaatcataatatcaaataacattcataacatcaattgaacatgaatcacatctcaaat |
4200138 |
T |
 |
| Q |
110 |
caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
|||| ||||||| | ||||||| | |||| ||| ||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| || |
|
|
| T |
4200137 |
caacaacaacataagagaaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta |
4200038 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||| | |||||||||||||||| |
|
|
| T |
4200037 |
acatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagca |
4199985 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 259
Target Start/End: Complemental strand, 22366733 - 22366481
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| ||||||||| |||| ||| | || ||| | ||||||| ||| ||||| |||| | ||||| | |
|
|
| T |
22366733 |
catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagcatcacaactcaaat |
22366634 |
T |
 |
| Q |
110 |
caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | | ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| ||||| || |
|
|
| T |
22366633 |
taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta |
22366534 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||| || |||||||||||||||| |
|
|
| T |
22366533 |
acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca |
22366481 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 259
Target Start/End: Original strand, 25426628 - 25426880
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| ||||||||| |||| ||| | || ||| | ||||||| ||| |||||||||| | ||||| | |
|
|
| T |
25426628 |
catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat |
25426727 |
T |
 |
| Q |
110 |
caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | | ||||||| | ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| ||||| || |
|
|
| T |
25426728 |
taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta |
25426827 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||| || |||||||||||||||| |
|
|
| T |
25426828 |
acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca |
25426880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 256
Target Start/End: Complemental strand, 18778244 - 18777995
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| ||||||||| |||| ||| | || || | ||||||| ||| |||||||||| | ||||| | |
|
|
| T |
18778244 |
catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataatattcataacatcatttgaacaagaatcacaactcaaat |
18778145 |
T |
 |
| Q |
110 |
caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | | ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| ||||| || |
|
|
| T |
18778144 |
taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta |
18778045 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta |
256 |
Q |
| |
|
||||||||||||||||||||||| ||||| || ||||||||||||| |
|
|
| T |
18778044 |
acatcaattcatgcatacaaacataacatcacagcaagagcacgaattta |
18777995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 255
Target Start/End: Original strand, 27009975 - 27010089
Alignment:
| Q |
141 |
acaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaag |
240 |
Q |
| |
|
||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||| ||||||| | || ||||||||||||||||||||||| ||||| || |
|
|
| T |
27009975 |
acaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatcacag |
27010074 |
T |
 |
| Q |
241 |
ttggagcacgaattt |
255 |
Q |
| |
|
|||||||||||| |
|
|
| T |
27010075 |
caagagcacgaattt |
27010089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 259
Target Start/End: Original strand, 12374 - 12626
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| ||||||||| |||| ||| | || ||| | ||||||| ||| |||||||||| | ||||| | |
|
|
| T |
12374 |
catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat |
12473 |
T |
 |
| Q |
110 |
caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | | ||||||| | ||| ||||||| |||||||||| ||| || | ||||| | |||||| ||| | ||||||||| ||||| || |
|
|
| T |
12474 |
taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaacta |
12573 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||| || |||||||||||||||| |
|
|
| T |
12574 |
acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca |
12626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 256
Target Start/End: Complemental strand, 43443647 - 43443398
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||||| ||||||||| |||| ||| | || ||| | ||||||| ||| |||||| ||| | ||||| | |
|
|
| T |
43443647 |
catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagactcacatctcaaat |
43443548 |
T |
 |
| Q |
110 |
caactacaacatgtca--aattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
|||| ||||| | | |||||| | ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| || |
|
|
| T |
43443547 |
caacaacaacttagaagaaattcaccaattgagcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaacta |
43443448 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaattta |
256 |
Q |
| |
|
||||||||||||||||||||||| ||||| || ||||||||||||| |
|
|
| T |
43443447 |
acatcaattcatgcatacaaacataacatcacagcaagagcacgaattta |
43443398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 259
Target Start/End: Original strand, 19499899 - 19500151
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| ||||| ||||||| ||| ||||| |||| ||| | || ||| | ||||||| ||| |||||||||| | ||||| | |
|
|
| T |
19499899 |
catcatcaatccatgaatatgcataccaaagcaattattaatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat |
19499998 |
T |
 |
| Q |
110 |
caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | | ||||||| | ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| ||||| || |
|
|
| T |
19499999 |
taacaacaacttaggagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta |
19500098 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca |
259 |
Q |
| |
|
||||||||||||||||||||||| ||||| || |||||||||||||||| |
|
|
| T |
19500099 |
acatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca |
19500151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 259
Target Start/End: Complemental strand, 21073847 - 21073595
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| ||||||||| |||| ||| | || ||| | ||||||| ||| |||||||||| | ||||| | |
|
|
| T |
21073847 |
catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattgataacatcatttgaacaagaatcacaactcaaat |
21073748 |
T |
 |
| Q |
110 |
caactacaacatgtca--aattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | | |||||| | ||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| ||||| || |
|
|
| T |
21073747 |
taacaacaacttagaagaaattcaccactttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta |
21073648 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca |
259 |
Q |
| |
|
||| ||||||||||||||||||| ||||| || |||||||||||||||| |
|
|
| T |
21073647 |
acatccattcatgcatacaaacataacatcacagcaagagcacgaatttagca |
21073595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 29190522 - 29190478
Alignment:
| Q |
14 |
atcaatccatgaacatgtatacccaagcaatgattcatcaactat |
58 |
Q |
| |
|
|||||| |||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
29190522 |
atcaattcatgaatatgcatacccaagcaatgattcatcaactat |
29190478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 19862232 - 19862319
Alignment:
| Q |
34 |
acccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat |
121 |
Q |
| |
|
||||||| |||| |||||||| |||| ||| |||||| ||||||||||||||||||| || || || | ||||||||| ||||||| |
|
|
| T |
19862232 |
acccaagtcatgaatcatcaacaataatatcacttagcaacaacaacatcaattgcacatgattcttatcacaattcaacaacaacat |
19862319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 23493942 - 23494029
Alignment:
| Q |
34 |
acccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaacat |
121 |
Q |
| |
|
|||||||| |||| |||||| | | |||||| |||||| ||||||||||||||| ||| ||||| || | ||||||||| ||||||| |
|
|
| T |
23493942 |
acccaagccatgaatcatcatcaacaacatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacat |
23494029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 21310750 - 21310709
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
||||||||| |||||||||||||| |||| |||||||||||| |
|
|
| T |
21310750 |
ttcatgcattcaaacatatcatcatagttagagcacgaattt |
21310709 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 23981557 - 23981516
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
|||||||||||||||||||||||| | || |||||||||||| |
|
|
| T |
23981557 |
ttcatgcatacaaacatatcatcataattagagcacgaattt |
23981516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 17471844 - 17471768
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaat |
86 |
Q |
| |
|
|||||||||| |||||| ||| ||||||||||||||||||| || |||||||| ||| || |||||||||||| |
|
|
| T |
17471844 |
catcatcaattcatgaatatgcgtacccaagcaatgattcattcacaataacatcagttaacaataacaacatcaat |
17471768 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 32950879 - 32950951
Alignment:
| Q |
192 |
acaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat |
264 |
Q |
| |
|
||||||||||| |||| ||||| |||| || || || ||| ||||| |||| ||||||||||||| ||||||| |
|
|
| T |
32950879 |
acaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaat |
32950951 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 300
Target Start/End: Original strand, 48598 - 48890
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| | | | ||||||||||| |||||||||||| |||||| |
|
|
| T |
48598 |
catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaatagccataacatcaattgaacaagaatcataactcaatc |
48697 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
| | ||||| | |||| |||| | | | |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
48698 |
tagcaacaacttagcaaaattcaccaactgagcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattat |
48797 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
48798 |
catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatt |
48890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 237
Target Start/End: Original strand, 36093 - 36323
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||||| ||||||||| ||| ||| | || ||| | |||||| |||| ||| |||||| | ||||| | |
|
|
| T |
36093 |
catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcatattatcaaataacattcataacatctattgaacatgaatcacatctcaaat |
36192 |
T |
 |
| Q |
110 |
caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | | ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | || ||| ||| | ||||||||||||||| || |
|
|
| T |
36193 |
taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaacta |
36292 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatca |
237 |
Q |
| |
|
|||||||||| |||||||||||| ||||| |
|
|
| T |
36293 |
acatcaattcatacatacaaacataacatca |
36323 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 10 - 300
Target Start/End: Original strand, 41394222 - 41394514
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| |||||||| || |||||||||||| | |||||| | || || ||| ||||||||||| ||||||||| | ||||| |
|
|
| T |
41394222 |
catcatcaatccatgaatatgcatacccaatcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaca |
41394321 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| | ||| | |||| |||| | ||| |||||||||||| ||||| |||||| ||||||||| |||||| || | ||||||||||||||| |||| |
|
|
| T |
41394322 |
taacaataacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattat |
41394421 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41394422 |
catcaatttatgcatacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
41394514 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 51452589 - 51452755
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||||||||||| | |
|
|
| T |
51452589 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaat |
51452688 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
51452689 |
tattatcaattcatgcatacaaacatatcatcaaagttgaagcacgaatttagcaacaattatccat |
51452755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 300
Target Start/End: Original strand, 20931345 - 20931637
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||| ||| |||||| ||| ||||||||| ||| |||||||||| | |||||| |||| || | | ||||||||||| |||||||||| | ||||| | |
|
|
| T |
20931345 |
catcattaattcatgaatatgcatacccaagaaattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat |
20931444 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| |||| | |||| |||| | |||| |||||||||||||||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| |||| |
|
|
| T |
20931445 |
taacaacaatttagcaaaattcaccaatttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattat |
20931544 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||||||||| ||||||||| |
|
|
| T |
20931545 |
catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaacttcatacaacaattgaaaatt |
20931637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 300
Target Start/End: Original strand, 20445679 - 20445973
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||| ||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||||||| ||||||||||| | ||||| |
|
|
| T |
20445679 |
catcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaatt |
20445778 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|||| ||||| | |||| |||| | ||| |||||||||||| |||| |||||| | | || || |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
20445779 |
caacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattat |
20445878 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
20445879 |
catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt |
20445973 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 10 - 300
Target Start/End: Original strand, 20531444 - 20531738
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||| ||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||||||| ||||||||||| | ||||| |
|
|
| T |
20531444 |
catcctcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacagccataacatcaattgatcaagaatcataacacaatt |
20531543 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|||| ||||| | |||| |||| | ||| |||||||||||| |||| |||||| | | || || |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
20531544 |
caacaacaacttagcaaaattcaccaattgagcacaattttcaccacttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaattat |
20531643 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
|||||||||||||||||||||||| |||| | |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
20531644 |
catcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt |
20531738 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 10 - 300
Target Start/End: Original strand, 20913037 - 20913322
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| ||||||||||||| |||||||||| | || ||| |||| || | | ||||||||||| |||||||||| |||| |
|
|
| T |
20913037 |
catcatcaattcatgaatatgcatacccaagcaattattcatcaaccacaagatcaattaacaaccataacatcaattgaacaagaatca------aatt |
20913130 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||||||||| |||||| ||||||| | |||||| ||| | |||||||||| |||| |||| |
|
|
| T |
20913131 |
-aacaacaactttgcaaaattcaccaattgagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattat |
20913229 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||| ||||||||| |
|
|
| T |
20913230 |
catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccgtaagcaaaattcatacaacaattgaaaatt |
20913322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 300
Target Start/End: Complemental strand, 20893889 - 20893595
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| ||||| ||| |||||||| ||||||||||||||| | |||||| |||| || | ||||||||||| |||||||||||| ||||| |
|
|
| T |
20893889 |
catcatcaatttatgaatatgcatacccaaacaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataaatcaatc |
20893790 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | | ||||||||||||| |||| |
|
|
| T |
20893789 |
taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattat |
20893690 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
20893689 |
catcaattcatgcatacaaacatatcatcacagttggagcaagaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt |
20893595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 300
Target Start/End: Complemental strand, 37844714 - 37844419
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||| ||||| |||||| ||| ||||||||||||||| |||||||| | |||||| |||| || | | ||||||||||| |||||||||||| |||||| |
|
|
| T |
37844714 |
catcctcaattcatgaatatgcatacccaagcaatgactcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataactcaatc |
37844615 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttca-taacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | |||| ||||| ||| |||||||||||| || || |||||| | | || || |||||| ||| | ||||||||||||||| ||| |
|
|
| T |
37844614 |
taacaacaacttagcaaaattcattaattgagcacaattttcactattttatcatttgttcctacttgaacatgtaatttcaccaacaatcatacaatta |
37844515 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
37844514 |
tcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt |
37844419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 260
Target Start/End: Original strand, 22227809 - 22228061
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||||| ||||||||| |||||||| |||| ||| | ||||||||||| |||||||||| | ||||| | |
|
|
| T |
22227809 |
catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat |
22227908 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| | ||||||||||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||| |
|
|
| T |
22227909 |
taacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattat |
22228008 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaa |
260 |
Q |
| |
|
||||||||||||| | || ||| ||||| || ||||||||||||||||| |
|
|
| T |
22228009 |
catcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaa |
22228061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 260
Target Start/End: Original strand, 22232506 - 22232758
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||||| ||||||||| |||||||| |||| ||| | ||||||||||| |||||||||| | ||||| | |
|
|
| T |
22232506 |
catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat |
22232605 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| | ||||||||||||||||| |||||| ||||||||| |||||| ||| | || |||||||||||| |||| |
|
|
| T |
22232606 |
taacaacaacttagcaaaattcaacaattggacacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattat |
22232705 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaa |
260 |
Q |
| |
|
||||||||||||| | || ||| ||||| || ||||||||||||||||| |
|
|
| T |
22232706 |
catcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaa |
22232758 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 259
Target Start/End: Original strand, 2116258 - 2116506
Alignment:
| Q |
14 |
atcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagc-tcaattcaa |
112 |
Q |
| |
|
|||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||||||| ||||||||| | |||| | || |
|
|
| T |
2116258 |
atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaaatatcaaattaa |
2116357 |
T |
 |
| Q |
113 |
ctacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattat |
210 |
Q |
| |
|
| | ||| | |||| |||| | ||| |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| || |
|
|
| T |
2116358 |
caataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcat |
2116457 |
T |
 |
| Q |
211 |
caattcatgcatacaaacatatcatcaaagttggagcacgaatttagca |
259 |
Q |
| |
|
||||||||||||||||||||| ||||| ||| ||||||||| ||||| |
|
|
| T |
2116458 |
caattcatgcatacaaacataacatcacagtaaaagcacgaatctagca |
2116506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 45051554 - 45051674
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
|||||||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| |||||||||||||||||||| || ||||| |
|
|
| T |
45051554 |
gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac |
45051653 |
T |
 |
| Q |
239 |
agttggagcacgaatttagca |
259 |
Q |
| |
|
||| || ||||||| ||||| |
|
|
| T |
45051654 |
agtaagaacacgaatctagca |
45051674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 5072508 - 5072388
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| || ||||||||||||||| ||||||| ||||| |
|
|
| T |
5072508 |
gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcac |
5072409 |
T |
 |
| Q |
239 |
agttggagcacgaatttagca |
259 |
Q |
| |
|
|| |||||||||||||||| |
|
|
| T |
5072408 |
agcaagagcacgaatttagca |
5072388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 18601238 - 18601118
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| || ||||||||||||||||||||||| ||||| |
|
|
| T |
18601238 |
gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac |
18601139 |
T |
 |
| Q |
239 |
agttggagcacgaatttagca |
259 |
Q |
| |
|
|| ||||| |||||||||| |
|
|
| T |
18601138 |
agcaagagcatgaatttagca |
18601118 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 45051446 - 45051496
Alignment:
| Q |
14 |
atcaatccatgaacatgtatacccaagcaatgattcatcaactataacatc |
64 |
Q |
| |
|
|||||| |||||| ||| ||||||||||| |||||||||||| |||||||| |
|
|
| T |
45051446 |
atcaattcatgaatatgcatacccaagcagtgattcatcaacaataacatc |
45051496 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 22143402 - 22143361
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
|||||||||||||||| ||||||| |||| |||||||||||| |
|
|
| T |
22143402 |
ttcatgcatacaaacacatcatcatagttagagcacgaattt |
22143361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0141 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0141
Description:
Target: scaffold0141; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 106 - 271
Target Start/End: Original strand, 26892 - 27058
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||| | |
|
|
| T |
26892 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat |
26991 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26992 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
27058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0141; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 106 - 264
Target Start/End: Original strand, 22637 - 22796
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||| | |
|
|
| T |
22637 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat |
22736 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat |
264 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22737 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat |
22796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0124 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0124
Description:
Target: scaffold0124; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 1748 - 1582
Alignment:
| Q |
106 |
aattcaactacaacatgtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacact |
204 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||| ||||||||||||||||| | |
|
|
| T |
1748 |
aattcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaat |
1649 |
T |
 |
| Q |
205 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
1648 |
tattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccat |
1582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0413 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0413
Description:
Target: scaffold0413; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 10 - 300
Target Start/End: Complemental strand, 6326 - 6035
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| ||||||||| |||||| |||| |||| | ||||||| ||| |||||||||| | ||||||| |
|
|
| T |
6326 |
catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataacaaaaattaacatccataacatcacttgaacaagaatcaaatctcaatt |
6227 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||| | ||||| | |||| ||||||||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
6226 |
-aacaacaacttagcaaaattcaccaattcagcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattat |
6128 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||| |
|
|
| T |
6127 |
catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatcacaattcatacaacatttgagaatt |
6035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0302 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0302
Description:
Target: scaffold0302; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 297
Target Start/End: Original strand, 12115 - 12403
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| |||||| || |||||||| |||| ||| | ||||||||||| |||||||||| | ||||||| |
|
|
| T |
12115 |
catcatcaatccatgaatatgcatacccaagcaattattcatgaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaatt |
12214 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|| ||||| | |||| |||| | |||| |||||||||||| ||||| |||||| |||| ||||||||||| | | | ||||||||||||||| |||| |
|
|
| T |
12215 |
--acaacaacttaacaaaattcaccaatttagcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattat |
12312 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaa-ttcatacaacatttgaaa |
297 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||| ||||||||| |
|
|
| T |
12313 |
catcaattcatgcatacaaacatatcatcacagttagagcacgaatttagcaacaattatccataatcaaaatttcatacagcatttgaaa |
12403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 21 - 300
Target Start/End: Original strand, 171916 - 172197
Alignment:
| Q |
21 |
catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca |
120 |
Q |
| |
|
|||||| ||| ||||| |||||||||||||||||| | |||||| |||| || | | ||||||||||| ||||||||| || ||||||||||| ||||| |
|
|
| T |
171916 |
catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact |
172015 |
T |
 |
| Q |
121 |
tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat |
218 |
Q |
| |
|
| |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| |||||||||| |
|
|
| T |
172016 |
tagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat |
172115 |
T |
 |
| Q |
219 |
gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||||| |
|
|
| T |
172116 |
ccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatt |
172197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 21 - 300
Target Start/End: Original strand, 177619 - 177900
Alignment:
| Q |
21 |
catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca |
120 |
Q |
| |
|
|||||| ||| ||||| |||||||||||||||||| | |||||| |||| || | | ||||||||||| ||||||||| || ||||||||||| ||||| |
|
|
| T |
177619 |
catgaatatgcatacctaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcgtaactcaattcaaccacaact |
177718 |
T |
 |
| Q |
121 |
tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat |
218 |
Q |
| |
|
| |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | |||| |||||||||| |||| |||||||||| |
|
|
| T |
177719 |
tagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcat |
177818 |
T |
 |
| Q |
219 |
gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||||| |
|
|
| T |
177819 |
ccatacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatcaaaatttatacaacatttgaaaatt |
177900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0077 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0077
Description:
Target: scaffold0077; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 297
Target Start/End: Complemental strand, 37176 - 36885
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||| ||||||| |||||| ||||| |||||| |
|
|
| T |
37176 |
catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacgtcaattgaacaagattcataactcaatc |
37077 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|||| ||||| | |||| |||| | |||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||| | |||| |||| |
|
|
| T |
37076 |
caaccacaacttagcaaaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattat |
36977 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa |
297 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| || |||||||||||||||||||||| |
|
|
| T |
36976 |
catcaattcatgcatacaaacatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaa |
36885 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0025 (Bit Score: 115; Significance: 2e-58; HSPs: 3)
Name: scaffold0025
Description:
Target: scaffold0025; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 10 - 270
Target Start/End: Original strand, 8849 - 9111
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||||||||||||| | |||||| |||| | ||| ||||||||||| ||| ||||||| ||||||| |
|
|
| T |
8849 |
catcatcaattcatgaatatgtatacccaagcaatgattcatcaacaacaacatcaattaatagcaataacatcaattgaacattaatcatatctcaatt |
8948 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|||| ||||| | |||| |||| | ||| |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
8949 |
caacaacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat |
9048 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcca |
270 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| |
|
|
| T |
9049 |
catcaattcatgcatacaaacatatcatcacagatggagcacgaatttagcaacaattatcca |
9111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0025; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 10 - 297
Target Start/End: Original strand, 148721 - 149012
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| || |||||||||||||||||||||||| | ||| || |||| || | | ||||||||||| |||||||||| | ||||| | |
|
|
| T |
148721 |
catcatcaattcatgaatatacatacccaagcaatgattcatcaaccacaacttcaattaacaaccataacatcaattgaacaagaatcaaatctcaaat |
148820 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| ||||||||| |||||| ||| | |||||||||| |||| |||| |
|
|
| T |
148821 |
taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattat |
148920 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaa |
297 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||| || || |||||||||||||||||||||| |
|
|
| T |
148921 |
catcaattcatgcatacaaacatatcatcacagttggagcacaaatttaacaacaattatcaattatgcaaaaattcatacaacatttgaaa |
149012 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0025; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 300
Target Start/End: Original strand, 146838 - 146893
Alignment:
| Q |
245 |
agcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
|||| |||||||| |||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
146838 |
agcatgaatttaggaacaattatccataagcaaaattcatacaacatttgaaaatt |
146893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 111; Significance: 5e-56; HSPs: 16)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 14 - 300
Target Start/End: Complemental strand, 14626377 - 14626089
Alignment:
| Q |
14 |
atcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac |
113 |
Q |
| |
|
|||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||||||| ||||||||| | ||||| | ||| |
|
|
| T |
14626377 |
atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcaattgagcaagaatcaaatctcaagttaac |
14626278 |
T |
 |
| Q |
114 |
tacaacatgtca-aattcatccatttgcaca--attttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattat |
210 |
Q |
| |
|
||||| | || |||||| ||| ||||||| ||||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| || |
|
|
| T |
14626277 |
aacaacttagcataattca-ccaattgcacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcat |
14626179 |
T |
 |
| Q |
211 |
caattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||| |||||| ||||||||||| |||| |
|
|
| T |
14626178 |
caattcatgcatacaaacataacatcacagcaagagcacgaatttagcaataattatccataatcacaattcaaacaacatttgagaatt |
14626089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 21 - 300
Target Start/End: Original strand, 23153458 - 23153741
Alignment:
| Q |
21 |
catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca |
120 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||| | |||||| |||| || | | || |||||||| |||||||||||| |||||| ||| ||||| |
|
|
| T |
23153458 |
catgaatatgtatacccaagtaatgattcatcaaccacaacatcaattaacagccataatatcaattgaacaagaatcataactcaatctaacaacaact |
23153557 |
T |
 |
| Q |
121 |
tgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat |
218 |
Q |
| |
|
| |||| |||| | ||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |||||||||| |
|
|
| T |
23153558 |
tagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcat |
23153657 |
T |
 |
| Q |
219 |
gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| |||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
23153658 |
gcatacaaacatatcatcacagttggagcacgaatttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatt |
23153741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 35009702 - 35009439
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || ||||||||||||||| ||| | || | | |||| |
|
|
| T |
35009702 |
catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt |
35009603 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|||| ||||||| |||| |||| | ||| |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
35009602 |
caacaacaacatagcaaaattcaccaattgagcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat |
35009503 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||||||||||||||||||| || ||||| |||| ||||||||||||||||||||| |||||| |
|
|
| T |
35009502 |
catcaattcatgcatacaaacttaacatcacagttagagcacgaatttagcaacaattatccat |
35009439 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 21 - 271
Target Start/End: Complemental strand, 1657999 - 1657748
Alignment:
| Q |
21 |
catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca |
120 |
Q |
| |
|
|||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| |||||||| || |||||||||||| ||||||||| | | ||| |
|
|
| T |
1657999 |
catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattaacaacaataacatcaactgaacaagaatcataactcaattca-caataact |
1657901 |
T |
 |
| Q |
121 |
tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat |
218 |
Q |
| |
|
| |||| || ||| ||| ||||||||||||||||||| ||||| |||||| || |||||| || | ||||||||||||||| |||| |||||||||| |
|
|
| T |
1657900 |
tagcaaaatccatcaattgagcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat |
1657801 |
T |
 |
| Q |
219 |
gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
|||| |||||||| ||||| |||| ||||||||||||||||||||| |||||| |
|
|
| T |
1657800 |
gcatccaaacataacatcacagttagagcacgaatttagcaacaattatccat |
1657748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 21 - 271
Target Start/End: Original strand, 15862484 - 15862734
Alignment:
| Q |
21 |
catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca |
120 |
Q |
| |
|
|||||| ||| ||||||||||| |||||||||||| | |||||| |||| || ||| ||||| ||| | |||||||||||| ||||||||| | | ||| |
|
|
| T |
15862484 |
catgaatatgcatacccaagcagtgattcatcaacaacaacatcaattatcagcaataacataaat-gaacaagaatcataactcaattca-caataact |
15862581 |
T |
 |
| Q |
121 |
tgtcaaattc-atccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat |
218 |
Q |
| |
|
| |||| || ||| ||| ||||||||||||||||||| ||||| |||||| || |||||| || | ||||||||||||||| |||| |||||||||| |
|
|
| T |
15862582 |
tagcaaaatccatcaattgagcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcat |
15862681 |
T |
 |
| Q |
219 |
gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
||||||||||||| ||||| |||| |||||||||||||| |||||| |||||| |
|
|
| T |
15862682 |
gcatacaaacataacatcacagttagagcacgaatttagtaacaattatccat |
15862734 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 259
Target Start/End: Complemental strand, 1650352 - 1650105
Alignment:
| Q |
14 |
atcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac |
113 |
Q |
| |
|
|||||| |||||| ||| ||||||||||| |||||||||||| | |||||| | || || ||| ||||||||||| ||||||||| | ||||| | ||| |
|
|
| T |
1650352 |
atcaattcatgaatatgcatacccaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattgagcaagaatcaaatctcaaattaac |
1650253 |
T |
 |
| Q |
114 |
tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc |
211 |
Q |
| |
|
| ||| | |||| |||| | ||| |||||||||||| ||||| ||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||| |
|
|
| T |
1650252 |
cataacttagcaaaattcaccaattgagcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc |
1650153 |
T |
 |
| Q |
212 |
aattcatgcatacaaacatatcatcaaagttggagcacgaatttagca |
259 |
Q |
| |
|
||||||||||||||||| || ||||| ||| |||||||||| ||||| |
|
|
| T |
1650152 |
aattcatgcatacaaacgtaacatcacagtaagagcacgaatctagca |
1650105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 259
Target Start/End: Original strand, 25175563 - 25175815
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| ||||||||| |||| ||| | || ||| | ||||||| ||| |||||||||| | ||||| | |
|
|
| T |
25175563 |
catcatcaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcatttgaacaagaatcacaactcaaat |
25175662 |
T |
 |
| Q |
110 |
caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | | ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| ||||| || |
|
|
| T |
25175663 |
taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta |
25175762 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca |
259 |
Q |
| |
|
||||||||||||||||||||||| || || || |||||||||||||||| |
|
|
| T |
25175763 |
acatcaattcatgcatacaaacataacaacacagcaagagcacgaatttagca |
25175815 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 259
Target Start/End: Complemental strand, 27654235 - 27653983
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||| |||||||||| ||| ||||||||||||| ||||||||| |||| ||| | || ||| | ||||||| | | |||||||||| | ||||| | |
|
|
| T |
27654235 |
catcattaatccatgaatatgcatacccaagcaattattcatcaatcataatatcaaataacattcataacatcattggaacaagaatcacaactcaaat |
27654136 |
T |
 |
| Q |
110 |
caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | | ||||||| | |||| ||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| ||||| || |
|
|
| T |
27654135 |
taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaacta |
27654036 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca |
259 |
Q |
| |
|
|||||||||||||||||| |||| ||||| || |||||||||||||||| |
|
|
| T |
27654035 |
acatcaattcatgcatacaagcataacatcacagcaagagcacgaatttagca |
27653983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 27751605 - 27751688
Alignment:
| Q |
188 |
accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
||||||||||||||| || | ||||||||||||||||||||||| ||||| | || ||||||||||||||| ||| | |||||| |
|
|
| T |
27751605 |
accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccat |
27751688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 16825874 - 16825752
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatca--tacacttattatcaattcatgcatacaaacatatcatc |
236 |
Q |
| |
|
||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||| | |||| || ||||||||||||||||||||||| |||| |
|
|
| T |
16825874 |
gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacataacatc |
16825775 |
T |
 |
| Q |
237 |
aaagttggagcacgaatttagca |
259 |
Q |
| |
|
| || |||||||||||||||| |
|
|
| T |
16825774 |
acagcaagagcacgaatttagca |
16825752 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 271
Target Start/End: Original strand, 29665937 - 29666137
Alignment:
| Q |
74 |
caacaacatcaattgcacaagaatcatagctcaattcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatat |
171 |
Q |
| |
|
||||||||||||||| ||| |||||||| |||| |||||| ||||| | |||| |||| | ||| | ||||||| |||||||| ||||| | |||| |
|
|
| T |
29665937 |
caacaacatcaattgaacatgaatcatatctcatttcaacaacaacttagcaaaattcaccaattgagtacaattt-cataacttgacatttatgcatac |
29666035 |
T |
 |
| Q |
172 |
tt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatcc |
269 |
Q |
| |
|
|| ||||||| ||| | ||| ||||||||||| |||| |||||||||| |||| || ||| ||||| || | ||||||||||||| ||||||| |||| |
|
|
| T |
29666036 |
tttgaaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatcc |
29666135 |
T |
 |
| Q |
270 |
at |
271 |
Q |
| |
|
|| |
|
|
| T |
29666136 |
at |
29666137 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 18381909 - 18381821
Alignment:
| Q |
32 |
atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca |
120 |
Q |
| |
|
|||||||||| |||| |||||||| | |||||| |||||| ||||||||||||||| ||| || || || | ||||||||| |||||| |
|
|
| T |
18381909 |
atacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattgaacatgactcttatcacaattcaacaacaaca |
18381821 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 27740838 - 27740941
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| |||||||| | |||||||||| || | |||||| || | |||| |||||||||| ||| |||||||| ||||||| |
|
|
| T |
27740838 |
catcatcaattcatgaatatgcatacccaaaccatgattcatccacaacaacatcagataatagcaaccacatcaattgaacatgaatcatatctcaatt |
27740937 |
T |
 |
| Q |
110 |
caac |
113 |
Q |
| |
|
|||| |
|
|
| T |
27740938 |
caac |
27740941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 16887833 - 16887792
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
||||||||||||||||||| |||| |||| |||||||||||| |
|
|
| T |
16887833 |
ttcatgcatacaaacatattatcatagttagagcacgaattt |
16887792 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 33324898 - 33324939
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
33324898 |
ttcatgcatacaaacatatcatcctagttagagcacgaattt |
33324939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 35136054 - 35136013
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
35136054 |
ttcatgcatacaaacatatcatcctagttagagcacgaattt |
35136013 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0106 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0106
Description:
Target: scaffold0106; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 14 - 300
Target Start/End: Original strand, 41733 - 42021
Alignment:
| Q |
14 |
atcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac |
113 |
Q |
| |
|
|||||| |||||| ||| |||||||| ||||||||||||| ||| |||| | |||| || | | | ||||||||| |||||||||||| |||||| ||| |
|
|
| T |
41733 |
atcaattcatgaatatgcatacccaaccaatgattcatcatctacaacaacaattaacagccatagcatcaattgaacaagaatcataactcaatctaac |
41832 |
T |
 |
| Q |
114 |
tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc |
211 |
Q |
| |
|
||||| | |||| |||| | ||| |||||||||||| || || |||||| ||||||||| | |||| ||| | ||||||||| ||| |||| ||| |
|
|
| T |
41833 |
aacaacttagcaaaattcaccaattgagcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatc |
41932 |
T |
 |
| Q |
212 |
aattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
41933 |
aattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatt |
42021 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0218 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0218
Description:
Target: scaffold0218; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 10 - 300
Target Start/End: Complemental strand, 5324 - 5031
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||| ||||| |||||| ||| ||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| |||| | |
|
|
| T |
5324 |
catcctcaattcatgaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcattc |
5225 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| ||||||||| |||||| | | | |||||||||| |||| |||| |
|
|
| T |
5224 |
taacaacaactttgcaaaattcaccaattgagcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattat |
5125 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||| ||||||||||||||| ||| |||||||| ||||||||||||||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
5124 |
catcaattcacgcatacaaacatatcgtcacagttggagtacgaatttagcaacaattatccattatgaaaaattcatacaacatttgaaaatt |
5031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0018 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0018
Description:
Target: scaffold0018; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 139 - 300
Target Start/End: Complemental strand, 51314 - 51153
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
|||||||||||| ||||| |||||| ||| ||||| |||||| ||| | |||||||||| |||| |||| ||||||||||||||||||| ||||||||| |
|
|
| T |
51314 |
gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcac |
51215 |
T |
 |
| Q |
239 |
agttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
51214 |
agttggagcacgaatttagcaacaattatccataagcaaaattcatacaacatttgaaaatt |
51153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 10 - 300
Target Start/End: Complemental strand, 128431 - 128140
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| |||||||| |||| ||||||||| | |||||| |||| |||| | ||||||||||| |||||||||| | ||||||| |
|
|
| T |
128431 |
catcatcaattcatgaatatgcatacccaatcaattattcatcaatcacaacatccattaacatccataacatcaattgaacaagaatcaaatctcaatt |
128332 |
T |
 |
| Q |
110 |
caactacaacatgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| | ||| ||| ||||||||||| ||||| || | |||| |||| |||||| ||| | |||||||||| |||| |||| |
|
|
| T |
128331 |
-aacaacaacctaacaaaattcgccaattgagcacaattttcacaacttaacacctttacacatttgaacatgtaatttcaccaacaatcttacaattat |
128233 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||| |||||||||| |
|
|
| T |
128232 |
catcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagcaacaattatccataagcaaaattcatacaacttttgaaaatt |
128140 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 31928 - 31697
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||| |||||||||| ||| | ||||||||||| ||||||||| |||| || | || ||| | ||||||||||| ||| |||||| | ||||| | |
|
|
| T |
31928 |
catcattaatccatgaatatgcaaacccaagcaattattcatcaatcataatattaaataacattcataacatcaattgaacatgaatcacatctcaaat |
31829 |
T |
 |
| Q |
110 |
caactacaacat---gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactt |
205 |
Q |
| |
|
|||| ||||| | | ||||||| | ||| ||| ||| |||||||||| |||||| | ||||| | || ||| ||| | ||||||||||||||| | |
|
|
| T |
31828 |
caacaacaactttaggagaaattcaccaattgagcataatattcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaact |
31729 |
T |
 |
| Q |
206 |
attatcaattcatgcatacaaacatatcatca |
237 |
Q |
| |
|
| |||||||||||||| |||||||| ||||| |
|
|
| T |
31728 |
aacatcaattcatgcattcaaacataacatca |
31697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0049 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0049
Description:
Target: scaffold0049; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 48187 - 48443
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| ||||||| ||||| ||||||||| | |||||| |||| |||| | ||||||||||| |||||||||| | ||||| | |
|
|
| T |
48187 |
catcatcaatccatgaatatgcatacccaggcaattattcatcaatcacaacatcaattaacatctataacatcaattgaacaagaatcaaatctcaaat |
48286 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| |||| |||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
48287 |
taacaacaacttaacaaaattcaccaattgagcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattat |
48386 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat |
264 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
48387 |
catcaattcatgcatacaaacatatcattacagttggagcacgaatttagcaacaat |
48443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0011 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 300
Target Start/End: Complemental strand, 123427 - 123133
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||| ||||| |||||| ||| |||||||||| || |||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| || ||| |
|
|
| T |
123427 |
catcttcaattcatgaatatgcatacccaagccattattcatcaaccacaacatcaattaacaaccataacatcaattgaacaagaatcataacttaatc |
123328 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
123327 |
taacaacaacttagcaaaattcaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat |
123228 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| || ||||||||||||||||||| ||||| |
|
|
| T |
123227 |
catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatt |
123133 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 16 - 300
Target Start/End: Original strand, 272031 - 272317
Alignment:
| Q |
16 |
caatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaacta |
115 |
Q |
| |
|
|||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | |||| |||||| |||||||||||| |||||| |||| | |
|
|
| T |
272031 |
caattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagctataacaccaattgaacaagaatcataactcaatccaacca |
272130 |
T |
 |
| Q |
116 |
caacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaa |
213 |
Q |
| |
|
|||| | |||| |||| | |||| |||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||| |||||||||| |||| ||||| |
|
|
| T |
272131 |
caacttagcaaaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaa |
272230 |
T |
 |
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||| |||||||||||||||| | |||||||| ||| ||||||||| | | |||||||||||||||| |||||| ||||||||||| |
|
|
| T |
272231 |
ttcattcatacaaacatatcattacagttggagtacgtatttagcaatatttatccataatcaaaatttatacaatatttgaaaatt |
272317 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0162 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0162
Description:
Target: scaffold0162; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 10 - 300
Target Start/End: Complemental strand, 26678 - 26385
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||| ||||| ||| || ||| ||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| |||| | |
|
|
| T |
26678 |
catcctcaattcatcaatatgcatacccaagcaatgattcatcaatcacaacatcaattaacagccataacatcaattgaacaagaatcataactcattc |
26579 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| | |||||||||| ||||| |||||| ||||||||| |||||| | | | ||||| |||| |||| |||| |
|
|
| T |
26578 |
taacaacaacttagcaaaattcaccaattgagaacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattat |
26479 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat-caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| || ||||||||||||||||||||||||| |
|
|
| T |
26478 |
catcaattcacgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatacattatgaaaaattcatacaacatttgaaaatt |
26385 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0162; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 8440 - 8180
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||| | ||| |||||||||| ||||||||| ||| | |||||| |||| || ||||||||||||||| ||| | || | | |||| |
|
|
| T |
8440 |
catcatcaattcatgtatatgcatacccaagccatgattcataaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt |
8341 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|||| ||||| |||| |||| | ||| |||||||||||| |||||| ||||| |||||| || ||| || ||| | ||||||||||||||| |||| |
|
|
| T |
8340 |
caac---aacatagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattat |
8244 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
| ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||| |||||| |
|
|
| T |
8243 |
caccaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccat |
8180 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 21 - 300
Target Start/End: Complemental strand, 247694 - 247411
Alignment:
| Q |
21 |
catgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaactacaaca |
120 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||||| | |||||| |||| || | ||||||||||| |||||||||||| |||||| ||| ||||| |
|
|
| T |
247694 |
catgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagtcataacatcaattgaacaagaatcataactcaatctaacaacaact |
247595 |
T |
 |
| Q |
121 |
tgtcaaattcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcat |
218 |
Q |
| |
|
| |||| | ||| ||| ||||||||||| ||||| |||||| | | ||||| |||||| ||| | ||| |||||||||| |||| |||||||||| |
|
|
| T |
247594 |
tagcaaaatttaccaattgagcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcat |
247495 |
T |
 |
| Q |
219 |
gcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
247494 |
gcatacaaacatatcattacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatt |
247411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0498 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0498
Description:
Target: scaffold0498; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 10 - 300
Target Start/End: Original strand, 8878 - 9170
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| ||||||||||||| ||||||||| | |||||| |||| |||| | ||||||||||| |||||||||| | ||||| | |
|
|
| T |
8878 |
catcatcaatacatgaatatgcatacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat |
8977 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | |||| |||| | ||| |||||||||||| ||||| ||||| |||||| || |||||| ||| | |||||||||| |||| |||| |
|
|
| T |
8978 |
taacaacaacttaacaaaattcaccaattgagcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaattat |
9077 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataatcaaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
||| ||||||||||||||||||| ||||| | ||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||||| |
|
|
| T |
9078 |
catcgattcatgcatacaaacataacatcacaaatggagcacgaatttagcaacaattttccataagcaaaattcgtacaacttttgaaaatt |
9170 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0132 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0132
Description:
Target: scaffold0132; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 10 - 271
Target Start/End: Original strand, 13506 - 13769
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||| ||||| |||||| ||| ||||||||| ||||||||||||| | |||||| |||| || ||||||||||||||| ||| | || | | |||| |
|
|
| T |
13506 |
catcgtcaattcatgaatatgcatacccaagtcatgattcatcaacaacaacatcaattaacaacaacaacatcaattgaacatggttctcatcataatt |
13605 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
|||| ||||||| |||| |||||| ||| |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
13606 |
caacaacaacatagcaaaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattat |
13705 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
13706 |
catcaattcatgcatacaaacataacatcaaagttagagcacgaatttagcaacaattatccat |
13769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 93; Significance: 3e-45; HSPs: 3)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 10 - 264
Target Start/End: Original strand, 107747 - 108003
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||||| ||||||||| | |||||| |||| |||| | ||||||||||| |||||||||| | ||||| | |
|
|
| T |
107747 |
catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcacaacatcaattaacatccataacatcaattgaacaagaatcaaatctcaaat |
107846 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | ||||| |||| | ||| |||||||||| | ||||| |||||| | || |||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
107847 |
taacaacaacttatcaaaattcaccaattgagcacaatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattat |
107946 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaat |
264 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||||||||| |||||| |
|
|
| T |
107947 |
catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaat |
108003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 255
Target Start/End: Complemental strand, 64648 - 64527
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc-----aattcatgcatacaaacatatc |
233 |
Q |
| |
|
||||||| |||||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||| |||||||||||| ||||||| | |
|
|
| T |
64648 |
gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaatataattcatgcatataaacataac |
64549 |
T |
 |
| Q |
234 |
atcaaagttggagcacgaattt |
255 |
Q |
| |
|
|||| || |||||||||||| |
|
|
| T |
64548 |
atcacagcaagagcacgaattt |
64527 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaattta |
256 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
89905 |
ttcatgcatacaaacatatcatcatagttggagcacgaattta |
89863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0125 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0125
Description:
Target: scaffold0125; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 271
Target Start/End: Original strand, 41648 - 41911
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| ||| || ||||||||||||||| ||| | || | | |||| |
|
|
| T |
41648 |
catcatcaattcatgaatatgcatacccaagcaatgattcatcaacaacaacatcatttaacaacaacaacatcaattgaacatggttctcatcataatt |
41747 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
|||| ||||||| |||| |||| ||| ||| ||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| ||| |
|
|
| T |
41748 |
caacaacaacatagcaaaattca-ccaattgaacacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaatta |
41846 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
| ||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||| |||||| |
|
|
| T |
41847 |
tcatcaattcatgcatacaaacataacatcacagttagagcacgaatttaacaacaattatccat |
41911 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1542 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold1542
Description:
Target: scaffold1542; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 797 - 534
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||| ||||| | |||| ||| |||||||||||||||||||||||| | |||||| ||||||| | | |||||||||| |||||||||||| || ||| |
|
|
| T |
797 |
catcctcaattcctgaatatgcatacccaagcaatgattcatcaaccacaacatcaattagcagccataacatcaattaaacaagaatcataacttaatc |
698 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||| | |||| |||| | ||| | |||||||||| |||| |||||| | | ||||| |||||| ||| | ||||||||||||||| |||| |
|
|
| T |
697 |
taacagtaacttagcaaaattcaccaattgagtacaattttcacaactcatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattat |
598 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |
|
|
| T |
597 |
catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat |
534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0772 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0772
Description:
Target: scaffold0772; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 139 - 264
Target Start/End: Original strand, 5660 - 5785
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
||||||| ||||| |||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| |||||| |
|
|
| T |
5660 |
gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaa |
5759 |
T |
 |
| Q |
239 |
agttggagcacgaatttagcaacaat |
264 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
5760 |
agttggagcacgaatttagcaacaat |
5785 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0075 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0075
Description:
Target: scaffold0075; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 34724 - 34460
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgca-caagaatcatagctcaat |
108 |
Q |
| |
|
||||||||||||||||| ||| ||||||||| | |||||||||||| | |||||| | || || ||| |||||||||| | || |||||||| |||||| |
|
|
| T |
34724 |
catcatcaatccatgaatatgcatacccaagtagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaat |
34625 |
T |
 |
| Q |
109 |
tcaactacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||||| ||||| | |||| |||| | ||| | |||||||||| |||||| |||| |||| | || |||||| ||| | ||||||||||||||| ||| |
|
|
| T |
34624 |
tcaacaacaacttagcaaaattcacctattgagaacaattttcacaacttcatatttttacacaattgaacatgtaatttcaccaacaatcatacaatta |
34525 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||| |||||| |
|
|
| T |
34524 |
tcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaataattatccat |
34460 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 81; Significance: 4e-38; HSPs: 4)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 139 - 300
Target Start/End: Complemental strand, 89586 - 89423
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
|||||||||||| ||||| | |||| | | ||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||| ||||||||| |
|
|
| T |
89586 |
gcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcac |
89487 |
T |
 |
| Q |
239 |
agttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| || |||||||||| |||||||||||||| |
|
|
| T |
89486 |
agttggagcacgaatttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatt |
89423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 107835 - 107753
Alignment:
| Q |
220 |
catacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccataat--caaaattcatacaacatttgaaaatt |
300 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||||||||||| ||| |||||| || ||||||||||||||||||||||||| |
|
|
| T |
107835 |
catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccattatgcaaaaattcatacaacatttgaaaatt |
107753 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 79745 - 79786
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
|||||||||||||||||||||||| |||| | |||||||||| |
|
|
| T |
79745 |
ttcatgcatacaaacatatcatcatagttagtgcacgaattt |
79786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 79560 - 79616
Alignment:
| Q |
32 |
atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattg |
88 |
Q |
| |
|
|||||||||| |||| |||||||| |||| ||| |||||| ||||||||||||||| |
|
|
| T |
79560 |
atacccaagccatgaatcatcaacaataatatcacttagcaacaacaacatcaattg |
79616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0529 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0529
Description:
Target: scaffold0529; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 260
Target Start/End: Original strand, 2966 - 3215
Alignment:
| Q |
14 |
atcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgca-caagaatcatagctcaattcaa |
112 |
Q |
| |
|
|||||| |||||| ||| |||| |||||| |||||||||||| | |||||| | || || ||| |||||||||| | || |||||||| |||||||||| |
|
|
| T |
2966 |
atcaattcatgaatatgcatacacaagcagtgattcatcaacaacaacatcaaataacaacaataacatcaattaaaacatgaatcatatctcaattcaa |
3065 |
T |
 |
| Q |
113 |
ctacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattat |
210 |
Q |
| |
|
| ||||| | |||| |||| | ||| |||||||||||| |||||| ||||| |||||| || |||||| ||| | ||||||||||||||| |||| || |
|
|
| T |
3066 |
caacaacttagcaaaattcaccaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcat |
3165 |
T |
 |
| Q |
211 |
caattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaa |
260 |
Q |
| |
|
||||||||| ||||||||||| ||||| || ||||||||||||||||| |
|
|
| T |
3166 |
caattcatggatacaaacataacatcacagcaagagcacgaatttagcaa |
3215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0215 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0215
Description:
Target: scaffold0215; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 237
Target Start/End: Complemental strand, 9596 - 9371
Alignment:
| Q |
14 |
atcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac |
113 |
Q |
| |
|
|||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||| ||| ||||||||| | ||||| | ||| |
|
|
| T |
9596 |
atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaac |
9497 |
T |
 |
| Q |
114 |
tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc |
211 |
Q |
| |
|
| ||| | |||| |||| | ||| |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||| |
|
|
| T |
9496 |
aataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc |
9397 |
T |
 |
| Q |
212 |
aattcatgcatacaaacatatcatca |
237 |
Q |
| |
|
|||||||||||||||||||| ||||| |
|
|
| T |
9396 |
aattcatgcatacaaacataacatca |
9371 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0215; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 237
Target Start/End: Complemental strand, 16494 - 16269
Alignment:
| Q |
14 |
atcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaattcaac |
113 |
Q |
| |
|
|||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||| || | | ||||||| ||| ||||||||| | ||||| | ||| |
|
|
| T |
16494 |
atcaattcatgaatatgcatacccaagcaatgattcatcaactacaacatcaattaacaaccataacatcatttgagcaagaatcaaatctcaaattaac |
16395 |
T |
 |
| Q |
114 |
tacaacatgtcaaa-ttcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatc |
211 |
Q |
| |
|
| ||| | |||| |||| | ||| |||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||| |
|
|
| T |
16394 |
aataacttagcaaaattcaccaattgagcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatc |
16295 |
T |
 |
| Q |
212 |
aattcatgcatacaaacatatcatca |
237 |
Q |
| |
|
|||||||||||||||||||| ||||| |
|
|
| T |
16294 |
aattcatgcatacaaacataacatca |
16269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0369 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0369
Description:
Target: scaffold0369; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 221
Target Start/End: Original strand, 3722 - 3936
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| | ||||||| ||| ||||||||| |||||||| |||| ||| | ||||||||||| |||||||||| | ||||| | |
|
|
| T |
3722 |
catcatcaatccatgaatatgcaaacccaagtaattattcatcaatcataacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat |
3821 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccatttg-cacaattttcataacttctcatttct-acatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | |||| |||| | ||| | |||||||| |||||||| |||||| | |||||||| |||||| ||| | ||||||||||||||| ||| |
|
|
| T |
3822 |
taacaacaacttagcaaaattcaccaattggacacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaatta |
3921 |
T |
 |
| Q |
207 |
ttatcaattcatgca |
221 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
3922 |
tcatcaattcatgca |
3936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0076 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0076
Description:
Target: scaffold0076; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 236
Target Start/End: Original strand, 42997 - 43226
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||||| ||||||||| |||| ||| | || ||| | ||||||| ||| ||| |||||| | ||||| | |
|
|
| T |
42997 |
catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataatatcaaataacattcataacatcacttgaacacgaatcacatctcaaat |
43096 |
T |
 |
| Q |
110 |
caactacaacat--gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| | | ||||||| | |||| ||||||| |||||||||| ||||| ||||||||| |||||| ||| | ||||||||||||||| ||| |
|
|
| T |
43097 |
taacaacaacttaggagaaattcaccaatttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaatta |
43196 |
T |
 |
| Q |
207 |
ttatcaattcatgcatacaaacatatcatc |
236 |
Q |
| |
|
| ||||||||||||||| ||||||| |||| |
|
|
| T |
43197 |
tcatcaattcatgcatagaaacataacatc |
43226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0420 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0420
Description:
Target: scaffold0420; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 13445 - 13325
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
|||| ||||||| ||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| |||| ||||||||||||||||||||||| ||||| |
|
|
| T |
13445 |
gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac |
13346 |
T |
 |
| Q |
239 |
agttggagcacgaatttagca |
259 |
Q |
| |
|
| | |||||||||| ||||| |
|
|
| T |
13345 |
actaagagcacgaatctagca |
13325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0116 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0116
Description:
Target: scaffold0116; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 255
Target Start/End: Original strand, 167 - 283
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
||||||| | |||||||| |||||| |||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||||||||| ||||| |
|
|
| T |
167 |
gcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcac |
266 |
T |
 |
| Q |
239 |
agttggagcacgaattt |
255 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
267 |
agcaagagcacgaattt |
283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 5466 - 5254
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||||| |||||| || | |||||| |||| ||| | ||||||||||| |||||||||| | ||||| | |
|
|
| T |
5466 |
catcatcaatccatgaatatgca-acccaagcaattattcattaatcacaacatcaattaacattcataacatcaattgaacaagaatcaaatctcaaat |
5368 |
T |
 |
| Q |
110 |
caactacaacatgtcaaa-ttcatccatttg--cacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacactta |
206 |
Q |
| |
|
||| ||||| |||| |||| ||| ||| ||||||||||||||||| |||||| ||||||||| |||||| ||| | ||||||||||||||| ||| |
|
|
| T |
5367 |
taacaacaactcagcaaaattca-ccaattgaacacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaatta |
5269 |
T |
 |
| Q |
207 |
ttatcaattcatgca |
221 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
5268 |
tcatcaattcatgca |
5254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 102963 - 102923
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaatt |
254 |
Q |
| |
|
||||||||| |||||||||||||| | |||||||||||||| |
|
|
| T |
102963 |
ttcatgcattcaaacatatcatcataattggagcacgaatt |
102923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0622 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0622
Description:
Target: scaffold0622; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 9382 - 9480
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaat |
108 |
Q |
| |
|
|||||||||| |||||| ||| |||||||||||||||||||||||| | |||||| |||| || | | ||||||||||| |||||||||||| |||||| |
|
|
| T |
9382 |
catcatcaattcatgaatatgcatacccaagcaatgattcatcaaccacaacatcaattaacagccataacatcaattgaacaagaatcataactcaat |
9480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1711 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold1711
Description:
Target: scaffold1711; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 1424 - 1304
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaa |
238 |
Q |
| |
|
||||||| |||||||||| |||||| | ||||| | |||||| ||| | ||||||||||||||| || ||||||||||||||||||||||| ||||| |
|
|
| T |
1424 |
gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac |
1325 |
T |
 |
| Q |
239 |
agttggagcacgaatttagca |
259 |
Q |
| |
|
|| |||||||||||||||| |
|
|
| T |
1324 |
agcaagagcacgaatttagca |
1304 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0139 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0139
Description:
Target: scaffold0139; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 260
Target Start/End: Complemental strand, 21367 - 21115
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||| |||||||||| ||| | || |||||||| ||||||||| |||||||| | || ||| | ||||||||||| ||||||||| | ||||| | |
|
|
| T |
21367 |
catcattaatccatgaatatgcaaactcaagcaattattcatcaatcataacatcaaataacattcataacatcaattgaacaagaatccaatctcaaat |
21268 |
T |
 |
| Q |
110 |
caactacaacat-gtcaaattcatccattt-gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttat |
207 |
Q |
| |
|
||| ||||| | | ||||||| | ||| || |||| |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| |
|
|
| T |
21267 |
taacaacaacttaggaaaattcaccaattgagctcaatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattat |
21168 |
T |
 |
| Q |
208 |
tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaa |
260 |
Q |
| |
|
||||||| ||| ||||||||||| ||||| | ||||||||||||||||| |
|
|
| T |
21167 |
catcaattaatggatacaaacataacatcacaacaagagcacgaatttagcaa |
21115 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0139; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 14181 - 14083
Alignment:
| Q |
139 |
gcacaattttcataacttctcatttctacatatttaaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatca |
237 |
Q |
| |
|
||||||| |||||||||| |||||| ||||||||| |||||| ||| | || |||||||||| | |||| ||||||||||||||||| ||||| ||||| |
|
|
| T |
14181 |
gcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatca |
14083 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0104 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0104
Description:
Target: scaffold0104; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 99
Target Start/End: Original strand, 48514 - 48603
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatca |
99 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||||| ||||||||| |||||||| |||| |||| | |||||||| || |||||||||| |
|
|
| T |
48514 |
catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacatccataacatcaagtgaacaagaatca |
48603 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0361 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0361
Description:
Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 3370 - 3453
Alignment:
| Q |
188 |
accaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaatcatccat |
271 |
Q |
| |
|
||||||||||||||| ||| || ||||||||||||||||| || ||||| || | |||||||||||||||| |||| |||||| |
|
|
| T |
3370 |
accaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccat |
3453 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0066 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0066
Description:
Target: scaffold0066; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 221
Target Start/End: Original strand, 54416 - 54630
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatcatagctcaatt |
109 |
Q |
| |
|
|||||||||||||| || |||||||||||| |||||||| | || | |||||| ||| | ||||||||||||| | ||| |||||| | |||| || |
|
|
| T |
54416 |
catcatcaatccataaatatgtatacccaactcatgattcacccacaacaacatcagttaatagcaacaacatcaatggaacatgaatcacatctcattt |
54515 |
T |
 |
| Q |
110 |
caactacaacatgtc-aaattcatccatt-tgcacaattttcataacttctcatttctacata--tttaaacatggaatctaaccaacaatcatacactt |
205 |
Q |
| |
|
|||| ||||||| || ||||||| | ||| | |||| ||||||||||| ||||| |||||| || ||||||| ||| | ||| ||||||||||| || |
|
|
| T |
54516 |
caacaacaacatatcaaaattcaccaattgagtacaa-tttcataacttgacatttatacatactttgaaacatgcaatttcacccacaatcatacaatt |
54614 |
T |
 |
| Q |
206 |
attatcaattcatgca |
221 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
54615 |
atcatcaattcatgca |
54630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1560 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1560
Description:
Target: scaffold1560; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 115 - 26
Alignment:
| Q |
10 |
catcatcaatccatgaacatgtatacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattgcacaagaatca |
99 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||||| ||||||||| |||||||| |||| ||| | || |||| ||| |||||||||| |
|
|
| T |
115 |
catcatcaatccatgaatatgcaaacccaagcaattattcatcaatcataacatcaattaacattcataatatcatttgaacaagaatca |
26 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0456
Description:
Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
1587 |
ttcatgcatacaaacatatcatcatagttagagcacgaattt |
1546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0456; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
8732 |
ttcatgcatacaaacatatcatcatagttagagcacgaattt |
8691 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0123
Description:
Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Original strand, 8216 - 8257
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
8216 |
ttcatgcatacaaacatatcatcatagttagagcacgaattt |
8257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0084
Description:
Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 264
Target Start/End: Complemental strand, 56226 - 56106
Alignment:
| Q |
146 |
tttcataacttctcatttctacatattt--aaacatggaatctaaccaacaatcatacacttattatcaattcatgcatacaaacatatcatcaaagttg |
243 |
Q |
| |
|
||||||||||| ||||| |||||| || ||||||| ||| | | | ||||||||||| |||| ||||| ||||||| || || ||| ||||| |||| |
|
|
| T |
56226 |
tttcataacttgacatttatacatactttaaaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagtta |
56127 |
T |
 |
| Q |
244 |
gagcacgaatttagcaacaat |
264 |
Q |
| |
|
||||||||||||| ||||||| |
|
|
| T |
56126 |
gagcacgaatttaacaacaat |
56106 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0058
Description:
Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 70348 - 70307
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
70348 |
ttcatgcatacaaacatatcatcatagttggagtacgaattt |
70307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0409 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0409
Description:
Target: scaffold0409; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 1386 - 1348
Alignment:
| Q |
217 |
atgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
1386 |
atgcatacaaacatatcatcatagttagagcacgaattt |
1348 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0409; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 9641 - 9603
Alignment:
| Q |
217 |
atgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
9641 |
atgcatacaaacatatcatcatagttagagcacgaattt |
9603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0151 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0151
Description:
Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 22463 - 22422
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
|||||||||||||||||||||||| | || |||||||||||| |
|
|
| T |
22463 |
ttcatgcatacaaacatatcatcatatttagagcacgaattt |
22422 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0032 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0032
Description:
Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 93814 - 93773
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaattt |
255 |
Q |
| |
|
|||||||||||| ||||||||||| | ||||||||||||||| |
|
|
| T |
93814 |
ttcatgcatacatacatatcatcataattggagcacgaattt |
93773 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0970 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0970
Description:
Target: scaffold0970; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 2476 - 2532
Alignment:
| Q |
32 |
atacccaagcaatgattcatcaactataacatctattagcatcaacaacatcaattg |
88 |
Q |
| |
|
|||||||||| |||| |||||||| | |||||| |||||| ||||||||||||||| |
|
|
| T |
2476 |
atacccaagccatgaatcatcaacaacaacatcacttagcaacaacaacatcaattg |
2532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0389 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0389
Description:
Target: scaffold0389; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 254
Target Start/End: Original strand, 10868 - 10908
Alignment:
| Q |
214 |
ttcatgcatacaaacatatcatcaaagttggagcacgaatt |
254 |
Q |
| |
|
|||||||||||||||||||||||| || | ||||||||||| |
|
|
| T |
10868 |
ttcatgcatacaaacatatcatcatagatagagcacgaatt |
10908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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