View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14735_low_5 (Length: 285)
Name: NF14735_low_5
Description: NF14735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14735_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 11 - 267
Target Start/End: Complemental strand, 4069788 - 4069534
Alignment:
| Q |
11 |
cagagaagggaaaccatatgcattacaaaccaatgtatgggcaaatggtgaaggggatagagagcaaaaaatccacctttggtttgatcccacaactgat |
110 |
Q |
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| T |
4069788 |
cagagaagggaaaccatatgcattacaaaccaatgtatgggcaaatggtgaaggggatagagagcaaaaaatccacctttggtttgatcccacaactgat |
4069689 |
T |
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| Q |
111 |
tttcatgactacaaaattctttggaacccacatcaaattgtgtaagatatattcatgcttctttgactcttaaaaatgtaaaaatcatttcttttataaa |
210 |
Q |
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| T |
4069688 |
tttcatgactacaaaattctttggaacccacatcaaattgtgtaagatatattcatgctcctttgactcttaaaaatgtaaaaatcatttcttttataaa |
4069589 |
T |
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| Q |
211 |
ctatataataaacaaacattagtataaaaggtgaacaagtctgaaactacactatat |
267 |
Q |
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| T |
4069588 |
ctatataataaacaacccttagtataaaaggtgaacaag--tgaaactacactatat |
4069534 |
T |
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