View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14735_low_8 (Length: 260)
Name: NF14735_low_8
Description: NF14735
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14735_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 10 - 246
Target Start/End: Original strand, 50640848 - 50641084
Alignment:
| Q |
10 |
atatatatgtgtttcaaaacaatcagtttatgcatgtgcagtctatatcaaactgtttcattcatttcttgcaatctaggcatcctactgttttgttctt |
109 |
Q |
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| T |
50640848 |
atatatatgtgtttcaaaacaatcagtttatgcatgtgcagtctatatcaaactgtttcattcatttcttgcaatctagacatcctactgttttgttctt |
50640947 |
T |
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| Q |
110 |
aatcctaggtttactttgagatggagatgattgttagcagacaaacagcatgcaacccacaaatgtggtgacacaataattcactaggaaaccatttgta |
209 |
Q |
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| T |
50640948 |
aatcctaggtttactttgagatggagatgattgttagcagacaaacagcatgcaacccacaaatgtggtgacacaataattcactaggaaaccttttgta |
50641047 |
T |
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| Q |
210 |
tgtgtttaaaatagaaagaacaaaagaagctagaaat |
246 |
Q |
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| T |
50641048 |
tgtgtttaaaatagaaagaacaaaagaagctagaaat |
50641084 |
T |
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