View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14737_low_10 (Length: 315)

Name: NF14737_low_10
Description: NF14737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14737_low_10
NF14737_low_10
[»] chr5 (43 HSPs)
chr5 (51-216)||(35776485-35776650)
chr5 (203-262)||(30489135-30489194)
chr5 (13-56)||(35777155-35777198)
chr5 (203-262)||(15966685-15966744)
chr5 (181-262)||(36329122-36329203)
chr5 (202-262)||(9004985-9005045)
chr5 (202-262)||(36137053-36137113)
chr5 (203-262)||(7336894-7336953)
chr5 (203-262)||(18942025-18942084)
chr5 (203-262)||(34102114-34102173)
chr5 (203-262)||(34186397-34186456)
chr5 (203-262)||(37554386-37554445)
chr5 (181-262)||(14571025-14571106)
chr5 (181-262)||(39916302-39916383)
chr5 (202-262)||(14274172-14274232)
chr5 (210-262)||(35067961-35068013)
chr5 (256-308)||(35776246-35776298)
chr5 (181-265)||(37637286-37637370)
chr5 (203-258)||(1723289-1723344)
chr5 (203-262)||(15965995-15966054)
chr5 (203-262)||(21152630-21152689)
chr5 (203-262)||(21159765-21159824)
chr5 (203-262)||(21163572-21163631)
chr5 (203-262)||(22473977-22474036)
chr5 (203-262)||(37685009-37685068)
chr5 (203-262)||(38860842-38860901)
chr5 (203-262)||(40914155-40914214)
chr5 (203-262)||(43340454-43340513)
chr5 (203-262)||(43585537-43585596)
chr5 (203-262)||(20503272-20503327)
chr5 (176-262)||(32067954-32068040)
chr5 (196-262)||(36964272-36964338)
chr5 (181-258)||(14416423-14416500)
chr5 (213-262)||(26168237-26168286)
chr5 (181-262)||(27990374-27990455)
chr5 (181-262)||(37685012-37685093)
chr5 (181-262)||(11784302-11784384)
chr5 (202-262)||(12165322-12165382)
chr5 (202-262)||(14571050-14571110)
chr5 (210-262)||(24433581-24433633)
chr5 (210-262)||(31947492-31947544)
chr5 (202-258)||(34102121-34102177)
chr5 (210-262)||(35907874-35907926)
[»] chr8 (33 HSPs)
chr8 (177-262)||(20524179-20524264)
chr8 (196-262)||(13832040-13832106)
chr8 (170-262)||(42149168-42149260)
chr8 (175-262)||(44282307-44282394)
chr8 (176-262)||(5040080-5040166)
chr8 (202-262)||(34194598-34194658)
chr8 (202-262)||(34326287-34326347)
chr8 (182-254)||(35874483-35874555)
chr8 (210-262)||(44838820-44838872)
chr8 (203-262)||(27781923-27781982)
chr8 (203-262)||(35969701-35969760)
chr8 (203-262)||(37922851-37922910)
chr8 (203-262)||(38883988-38884047)
chr8 (203-262)||(40802242-40802301)
chr8 (203-262)||(41177997-41178056)
chr8 (203-262)||(42631821-42631880)
chr8 (203-262)||(43483974-43484033)
chr8 (174-256)||(29730697-29730779)
chr8 (181-262)||(3611811-3611892)
chr8 (203-262)||(8568859-8568918)
chr8 (203-262)||(26492351-26492410)
chr8 (203-262)||(32032991-32033050)
chr8 (203-262)||(34188360-34188419)
chr8 (203-262)||(34194602-34194661)
chr8 (203-262)||(35063502-35063561)
chr8 (203-262)||(39655459-39655518)
chr8 (203-262)||(42795137-42795196)
chr8 (203-261)||(24726078-24726136)
chr8 (207-256)||(26191817-26191866)
chr8 (202-262)||(7256925-7256985)
chr8 (202-262)||(19293058-19293118)
chr8 (202-262)||(29916173-29916233)
chr8 (202-258)||(40716784-40716840)
[»] chr2 (38 HSPs)
chr2 (202-258)||(29573852-29573908)
chr2 (171-262)||(921858-921949)
chr2 (202-262)||(42579057-42579117)
chr2 (203-262)||(5144310-5144369)
chr2 (203-262)||(5204931-5204990)
chr2 (203-262)||(34466137-34466196)
chr2 (202-262)||(9071243-9071303)
chr2 (203-262)||(10099591-10099650)
chr2 (203-262)||(26567678-26567737)
chr2 (203-262)||(30905163-30905222)
chr2 (203-262)||(32070503-32070562)
chr2 (159-258)||(32473466-32473565)
chr2 (203-261)||(9158017-9158075)
chr2 (176-262)||(31596809-31596895)
chr2 (160-238)||(42955099-42955177)
chr2 (181-262)||(10041559-10041640)
chr2 (202-262)||(8554709-8554769)
chr2 (202-262)||(32346116-32346175)
chr2 (210-262)||(37486045-37486097)
chr2 (215-262)||(324838-324885)
chr2 (203-258)||(2795356-2795411)
chr2 (203-262)||(4898207-4898266)
chr2 (203-262)||(4945601-4945660)
chr2 (203-262)||(9709700-9709759)
chr2 (203-262)||(17843993-17844052)
chr2 (203-262)||(24971247-24971306)
chr2 (203-262)||(33618236-33618295)
chr2 (203-262)||(40739531-40739590)
chr2 (203-262)||(43514798-43514857)
chr2 (160-258)||(42579065-42579163)
chr2 (181-262)||(8382840-8382921)
chr2 (181-262)||(40739534-40739615)
chr2 (202-262)||(2795348-2795408)
chr2 (202-266)||(11093568-11093632)
chr2 (202-262)||(24971243-24971303)
chr2 (202-262)||(29771756-29771816)
chr2 (210-262)||(34240866-34240917)
chr2 (210-262)||(45123841-45123893)
[»] chr4 (64 HSPs)
chr4 (203-262)||(17028275-17028334)
chr4 (202-262)||(13743896-13743956)
chr4 (202-262)||(40952577-40952637)
chr4 (203-262)||(11583746-11583805)
chr4 (203-262)||(26206636-26206695)
chr4 (203-262)||(30162650-30162709)
chr4 (203-262)||(48042630-48042689)
chr4 (196-262)||(44551230-44551296)
chr4 (205-262)||(49745505-49745562)
chr4 (158-225)||(2941766-2941834)
chr4 (206-258)||(5048481-5048533)
chr4 (206-262)||(16450201-16450257)
chr4 (182-254)||(24448683-24448755)
chr4 (202-262)||(53403033-53403093)
chr4 (203-262)||(4711448-4711507)
chr4 (203-262)||(33084756-33084815)
chr4 (203-262)||(41788960-41789019)
chr4 (202-265)||(43635874-43635937)
chr4 (203-262)||(44639785-44639844)
chr4 (203-262)||(48079558-48079617)
chr4 (176-262)||(34458997-34459083)
chr4 (204-262)||(53508540-53508598)
chr4 (204-262)||(53551637-53551695)
chr4 (181-262)||(33659814-33659895)
chr4 (181-262)||(42013163-42013244)
chr4 (170-258)||(11511714-11511802)
chr4 (210-262)||(19754257-19754309)
chr4 (210-262)||(19785497-19785549)
chr4 (202-262)||(24331467-24331527)
chr4 (202-262)||(25856048-25856108)
chr4 (210-262)||(43635878-43635930)
chr4 (181-253)||(46779345-46779417)
chr4 (203-262)||(17659504-17659563)
chr4 (203-262)||(23329412-23329471)
chr4 (203-262)||(23710874-23710933)
chr4 (203-262)||(24529615-24529674)
chr4 (203-262)||(29978531-29978590)
chr4 (203-262)||(32112356-32112415)
chr4 (203-262)||(39294212-39294271)
chr4 (203-262)||(39754141-39754200)
chr4 (203-258)||(45070880-45070935)
chr4 (203-258)||(46996520-46996575)
chr4 (203-262)||(50038492-50038551)
chr4 (203-262)||(50045714-50045773)
chr4 (203-262)||(51126147-51126206)
chr4 (203-262)||(54569395-54569454)
chr4 (203-262)||(55131578-55131637)
chr4 (203-262)||(55501244-55501303)
chr4 (181-259)||(19754232-19754310)
chr4 (181-259)||(19785496-19785574)
chr4 (160-262)||(20542799-20542901)
chr4 (202-236)||(49806396-49806430)
chr4 (193-254)||(21142140-21142201)
chr4 (159-268)||(42184675-42184784)
chr4 (203-260)||(56420475-56420532)
chr4 (210-262)||(9968343-9968395)
chr4 (202-262)||(11583749-11583809)
chr4 (186-254)||(31262616-31262684)
chr4 (206-262)||(36721788-36721844)
chr4 (202-254)||(36786188-36786240)
chr4 (206-258)||(46996516-46996568)
chr4 (202-262)||(50038488-50038548)
chr4 (202-262)||(50045710-50045770)
chr4 (202-262)||(54787024-54787084)
[»] chr3 (35 HSPs)
chr3 (175-262)||(23783311-23783398)
chr3 (196-263)||(38014836-38014903)
chr3 (160-262)||(47931732-47931833)
chr3 (202-259)||(43898131-43898188)
chr3 (202-262)||(7672731-7672791)
chr3 (202-262)||(8126168-8126228)
chr3 (202-262)||(13083913-13083973)
chr3 (203-259)||(18480915-18480971)
chr3 (202-262)||(29076567-29076627)
chr3 (203-262)||(16127787-16127846)
chr3 (203-262)||(32589357-32589416)
chr3 (196-262)||(39530437-39530503)
chr3 (196-262)||(40326470-40326536)
chr3 (181-262)||(26043267-26043348)
chr3 (202-262)||(7672735-7672795)
chr3 (210-262)||(32833722-32833774)
chr3 (203-262)||(1043965-1044024)
chr3 (203-262)||(19679004-19679063)
chr3 (203-262)||(21659177-21659236)
chr3 (203-262)||(22995735-22995794)
chr3 (203-262)||(32833719-32833778)
chr3 (203-262)||(40760813-40760872)
chr3 (202-257)||(42595784-42595839)
chr3 (203-262)||(44435216-44435275)
chr3 (181-256)||(46967474-46967549)
chr3 (203-262)||(51760211-51760270)
chr3 (203-262)||(54680531-54680590)
chr3 (213-262)||(23005057-23005106)
chr3 (203-256)||(29676254-29676307)
chr3 (202-262)||(14626670-14626730)
chr3 (202-262)||(34205605-34205665)
chr3 (174-262)||(40504076-40504164)
chr3 (202-258)||(51204521-51204577)
chr3 (167-219)||(51859133-51859185)
chr3 (202-262)||(52638075-52638135)
[»] scaffold0340 (1 HSPs)
scaffold0340 (202-262)||(14071-14131)
[»] chr7 (31 HSPs)
chr7 (181-261)||(24733132-24733212)
chr7 (203-262)||(19531992-19532051)
chr7 (203-262)||(46221120-46221179)
chr7 (203-262)||(46578307-46578366)
chr7 (203-268)||(11032339-11032404)
chr7 (202-262)||(27942363-27942423)
chr7 (203-262)||(3498336-3498395)
chr7 (176-259)||(9503941-9504024)
chr7 (203-262)||(37066224-37066283)
chr7 (203-262)||(46477175-46477234)
chr7 (209-258)||(12171705-12171754)
chr7 (181-262)||(33471532-33471613)
chr7 (181-262)||(35593658-35593739)
chr7 (202-262)||(12307855-12307915)
chr7 (202-262)||(45833232-45833292)
chr7 (202-262)||(47778471-47778531)
chr7 (203-262)||(24166305-24166364)
chr7 (203-262)||(48590624-48590683)
chr7 (192-225)||(29205340-29205373)
chr7 (181-262)||(31758525-31758606)
chr7 (181-262)||(33471507-33471588)
chr7 (181-262)||(35593683-35593764)
chr7 (202-262)||(6250642-6250702)
chr7 (202-262)||(21387618-21387678)
chr7 (214-262)||(31319558-31319606)
chr7 (202-262)||(32490627-32490687)
chr7 (202-262)||(39024105-39024165)
chr7 (202-262)||(39970199-39970259)
chr7 (202-262)||(46578303-46578363)
chr7 (202-262)||(46658774-46658834)
chr7 (202-262)||(48392904-48392964)
[»] chr1 (43 HSPs)
chr1 (202-262)||(6169848-6169908)
chr1 (203-262)||(50998346-50998405)
chr1 (181-268)||(52253574-52253661)
chr1 (181-254)||(26453030-26453103)
chr1 (203-262)||(12062236-12062295)
chr1 (203-262)||(21852479-21852538)
chr1 (203-262)||(24023407-24023466)
chr1 (203-262)||(24478707-24478766)
chr1 (160-222)||(47293180-47293242)
chr1 (181-262)||(38824308-38824389)
chr1 (201-262)||(39216145-39216206)
chr1 (181-262)||(45239008-45239089)
chr1 (210-262)||(12993566-12993618)
chr1 (210-258)||(17622809-17622857)
chr1 (210-262)||(21909887-21909939)
chr1 (206-258)||(23079398-23079449)
chr1 (210-262)||(33738209-33738261)
chr1 (202-262)||(37255164-37255224)
chr1 (203-262)||(1252173-1252232)
chr1 (203-262)||(4682979-4683038)
chr1 (203-262)||(15311511-15311570)
chr1 (203-262)||(17310457-17310516)
chr1 (203-262)||(27549084-27549143)
chr1 (203-262)||(31909788-31909847)
chr1 (203-258)||(40341769-40341824)
chr1 (190-225)||(43738684-43738719)
chr1 (203-262)||(48605109-48605168)
chr1 (205-262)||(1358213-1358270)
chr1 (213-262)||(5852730-5852779)
chr1 (213-262)||(6763383-6763432)
chr1 (213-262)||(46517994-46518043)
chr1 (209-262)||(47293292-47293345)
chr1 (201-262)||(52879926-52879987)
chr1 (202-262)||(6758584-6758644)
chr1 (202-262)||(12447496-12447556)
chr1 (210-262)||(21909883-21909935)
chr1 (202-258)||(26423470-26423526)
chr1 (174-262)||(34598904-34598992)
chr1 (202-262)||(38824333-38824393)
chr1 (204-268)||(39216143-39216207)
chr1 (202-262)||(40341772-40341832)
chr1 (206-258)||(41154950-41155002)
chr1 (203-262)||(42140371-42140428)
[»] chr6 (13 HSPs)
chr6 (203-262)||(667770-667829)
chr6 (203-262)||(32786158-32786217)
chr6 (160-262)||(31577435-31577537)
chr6 (210-262)||(3212283-3212335)
chr6 (203-262)||(14804207-14804264)
chr6 (202-262)||(29938388-29938448)
chr6 (203-262)||(3343816-3343875)
chr6 (203-262)||(3418795-3418854)
chr6 (203-262)||(21478595-21478654)
chr6 (203-262)||(31759366-31759425)
chr6 (202-262)||(6047994-6048054)
chr6 (202-262)||(21478591-21478651)
chr6 (210-262)||(33169224-33169276)
[»] scaffold0635 (1 HSPs)
scaffold0635 (181-262)||(5430-5511)
[»] scaffold0013 (1 HSPs)
scaffold0013 (165-262)||(58301-58398)
[»] scaffold0172 (1 HSPs)
scaffold0172 (203-262)||(11623-11682)
[»] scaffold0063 (1 HSPs)
scaffold0063 (171-261)||(54641-54731)
[»] scaffold0128 (1 HSPs)
scaffold0128 (206-262)||(44642-44698)


Alignment Details
Target: chr5 (Bit Score: 146; Significance: 6e-77; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 51 - 216
Target Start/End: Complemental strand, 35776650 - 35776485
Alignment:
Q  51 atcctttggctctgttgtcgttactccatgtgattgaatggagttatatttataatatgtaccatggaccattgattaaaaatatctattttaaatgatt 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  35776650 atcctttggctctgttgtcgttactccatgtgattgaatggagttatatttataatatgtaccatagaccattgattaaaaatatctattttaaatgatt 35776551  T
Q  151 aagttgtagtacttcctccattgtcaattgtaagtaaatttaatattttttattcatttaattaat 216  Q
    |||| ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  35776550 aagtagtagtacttcctccattgttaattataagtaaatgtaatattttttattcatttaattaat 35776485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 30489135 - 30489194
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| ||||||||||| ||||||||| || ||||||||||||||||||||    
T  30489135 ttcatttaattaattatgtatatagttcataatatagaccacatatatcattaattgaat 30489194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 35777198 - 35777155
Alignment:
Q  13 ttttttcctttaacttgctagtgcagttaaagtgttttatcctt 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  35777198 ttttttcctttaacttgctagtgcagttaaagtgttttatcctt 35777155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 15966744 - 15966685
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||||||| ||||| ||||||||||||||    
T  15966744 ttcattcaattaatgatgtatgtggtccataatataaaccacatacatcattaattgaat 15966685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 36329203 - 36329122
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||| ||||||||| ||||   |||||| |||||||||||||| | || |||||||| ||| ||||||||||||||||||||    
T  36329203 taagcaaatttaattttttaagttcattcaattaatgatgtatgtggtacataatatgaaccacatatatcattaattgaat 36329122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 9004985 - 9005045
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||||||||||| ||||| ||||||||||  ||||| || |||||||||||    
T  9004985 attcatttaattaatgatgtatgtagtctataatataaatcacatacattattaattgaat 9005045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 36137053 - 36137113
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| ||||||||||| ||||  ||||| ||||||||||||||    
T  36137053 attcattcaattaatgatgtatgtagtccataatttaaatcacatacatcattaattgaat 36137113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 7336894 - 7336953
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  7336894 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 7336953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 18942025 - 18942084
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||||| || ||||||||| || ||||| ||||||||||||||    
T  18942025 ttcattcaattaatgatgtatatggttcataatatagaccacatacatcattaattgaat 18942084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 34102114 - 34102173
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| ||||||||| ||| ||| ||||| ||||||||||||||    
T  34102114 ttcattgaattaatgatgtatgtagtccatattatgaaccacatacatcattaattgaat 34102173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 34186456 - 34186397
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  34186456 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 34186397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 37554386 - 37554445
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | || |||||||||||||||||| || |||||||||||    
T  37554386 ttcattcaattaatgatgtatgtggttcataatataaactacatacattattaattgaat 37554445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 14571025 - 14571106
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||| |||||| || ||||  ||||||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  14571025 taagcaaattttattttttagattcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaat 14571106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 39916302 - 39916383
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| |  ||||  ||||||||||||| |||||||| || |||||| ||||||| ||||| || |||||||||||    
T  39916302 taagtaaattttactttttagattcatttaattattgatgtatgtaatccatattataaaccacatacattattaattgaat 39916383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 14274172 - 14274232
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| | |||||||||||| | ||||||| ||||||||||||| |||||||| |||||    
T  14274172 attcattcatttaatgatgtatgtggtccatattataaactacatacatcattaaatgaat 14274232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 35068013 - 35067961
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||| ||| || ||||||||| |||||||| ||||||||||||||    
T  35068013 aattaatgatgtgtatggttcataatatagactacatacatcattaattgaat 35067961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 35776298 - 35776246
Alignment:
Q  256 attgaatcaatatttgaaccatgatcgagaaatacctccatatttaacctatg 308  Q
    ||||||||||| ||| ||||||||| ||||||| ||||||| |||||||||||    
T  35776298 attgaatcaatgtttaaaccatgattgagaaatgcctccatttttaacctatg 35776246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 37637286 - 37637370
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaatcaa 265  Q
    ||||||||||| || ||||   |||||| |||||||||||||| |    |||||||||||||||||| || ||||||||||||||    
T  37637286 taagtaaattttattttttaagttcattcaattaatgatgtatgtgactcataatataaactacatacattattaattgaatcaa 37637370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 1723344 - 1723289
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    |||||| |||||||||| ||||| || |||||||||||| ||||| ||||||||||    
T  1723344 ttcattcaattaatgatatatatggttcataatataaaccacatacatcattaatt 1723289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 15965995 - 15966054
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||| ||| ||||||| ||||| ||||||||||||||    
T  15965995 ttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaat 15966054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 21152689 - 21152630
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||||||  ||||| ||||||||||||||    
T  21152689 ttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaat 21152630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 21159824 - 21159765
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||||||  ||||| ||||||||||||||    
T  21159824 ttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaat 21159765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 21163631 - 21163572
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||||||  ||||| ||||||||||||||    
T  21163631 ttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaat 21163572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 22473977 - 22474036
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||| |||||||||||  ||||||||| ||||||| ||||| |||||||| |||||    
T  22473977 ttcatttatttaatgatgtacgtagtccatattataaacaacatacatcattaaatgaat 22474036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 37685009 - 37685068
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | || ||||||||| |||||||| || |||||||||||    
T  37685009 ttcattcaattaatgatgtatgtggttcataatatagactacatacattattaattgaat 37685068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 38860901 - 38860842
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  38860901 ttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaat 38860842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 40914214 - 40914155
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||| |||||||||||| | ||||||| ||||||| |||||||| ||||| |||||    
T  40914214 ttcatttatttaatgatgtatgtggtccatattataaaccacatatataattaaatgaat 40914155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 43340454 - 43340513
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||| || |||||||||||    
T  43340454 ttcattcaattaatgatgtatgtggtccatattataaaccacataaattattaattgaat 43340513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 43585596 - 43585537
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | || |||||||| ||| ||||| ||||||||||||||    
T  43585596 ttcattcaattaatgatgtatgtggttcataatatgaaccacatacatcattaattgaat 43585537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 20503272 - 20503327
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| ||||    ||||||||||||||| ||||||||||||||    
T  20503272 ttcattcaattaatgatgtatgtagt----aatataaactacatacatcattaattgaat 20503327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 262
Target Start/End: Complemental strand, 32068040 - 32067954
Alignment:
Q  176 aattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||| |||| ||||||||  ||||  ||||||| ||||||||||| |  | ||||||||||| ||| ||||| ||||||||||||||    
T  32068040 aattataagcaaatttaactttttaaattcattcaattaatgatgaacgtggtccataatatgaaccacatacatcattaattgaat 32067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 36964338 - 36964272
Alignment:
Q  196 ttttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||| ||||||| ||||| |||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  36964338 tttttgattcattcaattagtgatgtatgtggtctataatatgaaccacatacatcattaattgaat 36964272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 14416423 - 14416500
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    |||| |||||| || ||||  ||||||| |||||||||||||| | ||||||| ||||||  ||||| ||||||||||    
T  14416423 taagcaaattttattttttagattcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaatt 14416500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 26168237 - 26168286
Alignment:
Q  213 taatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  26168237 taatgatgtatgtggtccatattataaaccacatacatcattaattgaat 26168286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 27990374 - 27990455
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| ||||   ||| || |||||||||||||| | || |||| |||| | |||||| ||||||||||||||    
T  27990374 taagtaaatttaattttttaagttctttcaattaatgatgtatttggttcatattatagattacatacatcattaattgaat 27990455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 37685093 - 37685012
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||| |||||| || ||||  ||||||| ||||||| |||||| ||||| ||| ||| ||| ||||| ||||||||||||||    
T  37685093 taagcaaattttattttttagattcattcaattaataatgtatgtagtctatattatgaaccacatacatcattaattgaat 37685012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 11784302 - 11784384
Alignment:
Q  181 taagtaaatttaatatttttta--ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| || |||||||  |||||| ||||||| |||||| |||| ||||||||| |  ||||| ||||||||||||||    
T  11784302 taagtaaattttat-ttttttaggttcattcaattaataatgtatgtagttcataatatacatcacatacatcattaattgaat 11784384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 12165322 - 12165382
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||||||||||| | ||  ||||||||||  | ||| ||||||||||||||    
T  12165322 attcatttaattaatgatgtatgtggtatataatataaatcatatacatcattaattgaat 12165382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 14571110 - 14571050
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| | || ||||||||  || ||||| ||||||||||||||    
T  14571110 attcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaat 14571050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 24433581 - 24433633
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  24433581 aattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaat 24433633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 31947544 - 31947492
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||||  |||||||||| ||| ||||| || |||||||||||    
T  31947544 aattaatgatgtatatgatccataatatgaaccacatacataattaattgaat 31947492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 34102177 - 34102121
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    ||||||| |||||||||||||| | || ||||||||  |||||||| ||||||||||    
T  34102177 attcattcaattaatgatgtatgtggttcataatatggactacatacatcattaatt 34102121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 35907926 - 35907874
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||||| |||||||||||| |  | ||| ||||||||||||||    
T  35907926 aattaatgatgtatatggtccataatatagatcatatacatcattaattgaat 35907874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 262
Target Start/End: Original strand, 20524179 - 20524264
Alignment:
Q  177 attgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||| |||||| ||||| ||||  ||||||| ||||||| |||||||| ||||||| ||||||| ||||||||||||||||||||    
T  20524179 attgttagtaaaattaattttttagattcattcaattaataatgtatatggtccatattataaaccacatatatcattaattgaat 20524264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 13832040 - 13832106
Alignment:
Q  196 ttttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||| ||||||| |||||||||||||| | ||||||||||| ||| ||||||||||||||||||||    
T  13832040 tttttgattcattcaattaatgatgtatgtggtccataatatgaaccacatatatcattaattgaat 13832106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 42149260 - 42149168
Alignment:
Q  170 attgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||| |||| |||||| || |||| | |||||| |||||||||||||||| |||  |||||||||  ||||| ||||||||||||||    
T  42149260 attgtcaattataagcaaatttcattttttatgttcattcaattaatgatgtatatggtctctaatataaatcacatacatcattaattgaat 42149168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 44282394 - 44282307
Alignment:
Q  175 caattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||| |||| ||||||||| ||||  ||||||| |||||||||||||| | ||||| ||||| ||| ||||| ||||||||||||||    
T  44282394 caattataagcaaatttaattttttagattcattcaattaatgatgtatgtggtccacaatatgaaccacatacatcattaattgaat 44282307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 5040080 - 5040166
Alignment:
Q  176 aattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||| ||||||||||| | |||||  ||||||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  5040080 aattataagtaaatttgacattttagattcattcaattaatgatgtatgtggtccatattatgaacaacatacatcattaattgaat 5040166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 34194598 - 34194658
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| | ||||||| ||| ||||||||| ||||||||||||||    
T  34194598 attcattcaattaatgatgtatgtggtccatattatgaactacatacatcattaattgaat 34194658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 34326347 - 34326287
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| ||||||||||||||||||||  || ||||||| ||||| ||||||||||||||    
T  34326347 attcattcaattaatgatgtatatagtctttattataaacaacatacatcattaattgaat 34326287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 35874483 - 35874555
Alignment:
Q  182 aagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcatt 254  Q
    ||||||| || ||||||| |||||||||||||||||||||||||||||  || ||||||  ||||| ||||||    
T  35874483 aagtaaaatttatattttatattcatttaattaatgatgtatatagtctttattataaatcacatacatcatt 35874555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 44838820 - 44838872
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| | ||||||||||| ||| ||||||||||||||||||||    
T  44838820 aattaatgatgtatgtggtccataatatgaaccacatatatcattaattgaat 44838872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 27781923 - 27781982
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  27781923 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 27781982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 35969701 - 35969760
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||||| ||  ||||||||||||||||| || |||||||||||    
T  35969701 ttcattcaattaatgatgtatatggtttataatataaactacatacattattaattgaat 35969760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 37922851 - 37922910
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  37922851 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 37922910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 38884047 - 38883988
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  38884047 ttcattcaattaatgatgtatgttgtccatattataaaccacatacatcattaattgaat 38883988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 40802242 - 40802301
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  40802242 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 40802301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 41177997 - 41178056
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||||||| ||||  ||||||||||||||    
T  41177997 ttcattcaattaatgatgtatgtggtccataatataaaccacatgcatcattaattgaat 41178056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 42631880 - 42631821
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  42631880 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 42631821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 43484033 - 43483974
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  43484033 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 43483974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 29730697 - 29730779
Alignment:
Q  174 tcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaa 256  Q
    |||||| |||| ||||||||| ||||  |||||||||||||||||||||| | ||||||| ||| ||| || || ||||||||    
T  29730697 tcaattataagcaaatttaattttttggattcatttaattaatgatgtatgtggtccatattatgaaccacgtacatcattaa 29730779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 3611892 - 3611811
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||| || || |||||  |||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  3611892 taagtaaaattgatttttttggttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaat 3611811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 8568859 - 8568918
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  8568859 ttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaat 8568918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 26492410 - 26492351
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  26492410 ttcattgaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaat 26492351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 32033050 - 32032991
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| |||||| |  |||||||||| ||| ||||| ||||||||||||||    
T  32033050 ttcatttaattaataatgtatttgatccataatatgaaccacatacatcattaattgaat 32032991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 34188419 - 34188360
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| ||  ||||| ||||||||||||||    
T  34188419 ttcattcaattaatgatgtatgtggtccataatatgaataacatacatcattaattgaat 34188360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 34194661 - 34194602
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| |||| ||||||||  || ||||| ||||||||||||||    
T  34194661 ttcattcaattaatgatgtatgtagttcataatatggaccacatacatcattaattgaat 34194602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 35063561 - 35063502
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||||||||| | || |||| |||| || ||||| ||||||||||||||    
T  35063561 ttcatttaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaat 35063502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 39655518 - 39655459
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | |||||||||||  || ||||| ||||||||||||||    
T  39655518 ttcattcaattaatgatgtatgtggtccataatatggaccacatacatcattaattgaat 39655459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 42795196 - 42795137
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| ||||||||||||||||  ||||||||||| |  ||||| ||||||||||||||    
T  42795196 ttcattcaattaatgatgtatatgttccataatatagatcacatacatcattaattgaat 42795137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 24726136 - 24726078
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaa 261  Q
    |||||| ||||||||||| ||   ||||||| ||||||| |||||||||||||||||||    
T  24726136 ttcattcaattaatgatggatgcggtccatattataaaccacatatatcattaattgaa 24726078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 26191866 - 26191817
Alignment:
Q  207 tttaattaatgatgtatatagtccataatataaactacatatatcattaa 256  Q
    |||| |||||||||||| | || |||||||| ||||||||||||||||||    
T  26191866 tttatttaatgatgtatgtggttcataatatgaactacatatatcattaa 26191817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 7256925 - 7256985
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| ||||||| |||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  7256925 attcattcaattaataatgtatgtggtccatattatgaacgacatacatcattaattgaat 7256985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 19293118 - 19293058
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| ||| |||||||||| | ||| ||||||||||| ||||| |||||| |||||||    
T  19293118 attcattcaatcaatgatgtatgtggtctataatataaaccacatacatcattgattgaat 19293058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 29916233 - 29916173
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||| |||||||||||  || ||| |||| |||||||| ||||||||||||||    
T  29916233 attcattcaattgatgatgtatatgatctatattatagactacatacatcattaattgaat 29916173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 40716784 - 40716840
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    ||||||| |||||||||||||| | || |||| ||||||| ||||| ||||||||||    
T  40716784 attcattcaattaatgatgtatgtggtacatattataaaccacatacatcattaatt 40716840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 29573852 - 29573908
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  29573852 attcattaaattaatgatgtatatagtccataatataaaccacatacatcattaatt 29573908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 262
Target Start/End: Complemental strand, 921949 - 921858
Alignment:
Q  171 ttgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||| ||||||||||| || ||||   |||||| |||||||||||||| |||||||||||||| |  ||||| ||||||||||||||    
T  921949 ttgtcaattataagtaaatttgattttttaagttcattcaattaatgatgtatctagtccataatatagatcacatacatcattaattgaat 921858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 42579057 - 42579117
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||||||||||| ||||||||| ||| ||| ||||| ||||||||||||||    
T  42579057 attcatttaattaatgatgtatgtagtccatattatgaaccacatacatcattaattgaat 42579117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 5144369 - 5144310
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  5144369 ttcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 5144310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 5204931 - 5204990
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  5204931 ttcatttaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 5204990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 34466137 - 34466196
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||    
T  34466137 ttcattcaattaatgatgtatgtagtccataatatgaaccacatacatcattaattgaat 34466196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 9071243 - 9071303
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| ||||| ||||||||||| ||||| || |||||||||||    
T  9071243 attcattcaattaatgatgtatgtagtctataatataaaccacatacattattaattgaat 9071303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 10099591 - 10099650
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||||||||| | ||  |||||||| || ||||||||||||||||||||    
T  10099591 ttcatttaattaatgatgtatgtggtttataatatagaccacatatatcattaattgaat 10099650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 26567737 - 26567678
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| ||||| |||||||| ||||||||| ||||||| ||||| ||||||||||||||    
T  26567737 ttcattcaattattgatgtatgtagtccatattataaaccacatacatcattaattgaat 26567678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 30905163 - 30905222
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||| |||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  30905163 ttcatttaattattgatgtatgtggtccatattataaaccacatacatcattaattgaat 30905222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 32070562 - 32070503
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  32070562 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 32070503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 258
Target Start/End: Original strand, 32473466 - 32473565
Alignment:
Q  159 gtacttcctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    ||||| |||||||| | || | |||| |||||| || ||||  ||||||| |||||||||||||| | || ||||||||| || ||||||||||||||||    
T  32473466 gtactccctccatttttaaatataagcaaattttattttttagattcattcaattaatgatgtatgtggttcataatatagaccacatatatcattaatt 32473565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 9158075 - 9158017
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaa 261  Q
    |||||| |||||| ||||||||||||||||| ||| ||| ||||| |||||||||||||    
T  9158075 ttcattcaattaacgatgtatatagtccatattatgaaccacatacatcattaattgaa 9158017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 31596809 - 31596895
Alignment:
Q  176 aattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||| |||||||||||||| |||| |||||||| |||||||||||||| |  |||||| ||| ||| ||||| ||| |||| |||||    
T  31596809 aattataagtaaatttaattttttatattcattcaattaatgatgtatgtgatccatattatgaacgacatacatcgttaaatgaat 31596895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 42955177 - 42955099
Alignment:
Q  160 tacttcctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatata 238  Q
    |||||||||||||||||||| |||| || ||| | |||||  ||| ||| ||||||||||||||||  |||||||||||    
T  42955177 tacttcctccattgtcaattataagcaattttgacattttagatttattcaattaatgatgtatatgatccataatata 42955099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 10041559 - 10041640
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||| |||||| | |||||  |||||||||||||||||||||| | ||  |||||||| || ||||| ||||||||||||||    
T  10041559 taagaaaattttacattttagattcatttaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaat 10041640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 8554709 - 8554769
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||||||| ||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  8554709 attcatttaattaatgatatatgtggtccatattatgaaccacatacatcattaattgaat 8554769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 32346116 - 32346175
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||||| |||||||||||||| || ||| || |||||||||||    
T  32346116 attcattcaattaatgatgtatat-gtccataatataaattatatacattattaattgaat 32346175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 37486045 - 37486097
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  37486045 aattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 37486097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 262
Target Start/End: Complemental strand, 324885 - 324838
Alignment:
Q  215 atgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||| | ||||||| ||||||||||||| ||||||||||||||    
T  324885 atgatgtatgtggtccatattataaactacatacatcattaattgaat 324838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 2795411 - 2795356
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||    
T  2795411 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaatt 2795356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 4898266 - 4898207
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||||||  ||||| ||||||||||||||    
T  4898266 ttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaat 4898207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 4945660 - 4945601
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||||||  ||||| ||||||||||||||    
T  4945660 ttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaat 4945601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 9709759 - 9709700
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| || ||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  9709759 ttcattcaactaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 9709700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 17844052 - 17843993
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||||||| | ||| ||||||||||||||    
T  17844052 ttcattcaattaatgatgtatgtggtccatattataaaccatatacatcattaattgaat 17843993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 24971306 - 24971247
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| |||||||||||||  || ||||| ||||||| ||||||    
T  24971306 ttcattcaattaatgatgtatgtagtccataatatggaccacatacatcattagttgaat 24971247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 33618236 - 33618295
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| | |||||||||||||| || ||||||||| |||||||| |||||||| |||||    
T  33618236 ttcattcatttaatgatgtatatggttcataatatagactacatacatcattaaatgaat 33618295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 40739531 - 40739590
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||| ||| | ||||||||||| ||| ||||| ||||||||||||||    
T  40739531 ttcattcaattaatgatatatgtggtccataatatgaaccacatacatcattaattgaat 40739590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 43514857 - 43514798
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||||| ||| ||| ||| ||| ||||| ||||||||||||||    
T  43514857 ttcattcaattaatgatgtatatggtctatattatgaaccacatacatcattaattgaat 43514798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 42579163 - 42579065
Alignment:
Q  160 tacttcctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    |||| |||||||| | || | ||||||||||| |  ||||  ||||||| |||||||||||||| | || ||||||||  |||||||| ||||||||||    
T  42579163 tactccctccatttttaaatataagtaaattttactttttagattcattcaattaatgatgtatgtggttcataatatggactacatacatcattaatt 42579065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 8382921 - 8382840
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| || ||||   |||||| ||||||| || ||||| || |||||||||||| |||||  |||||||||||||    
T  8382921 taagtaaattttattttttaggttcattcaattaataatatatatggttcataatataaaccacatacgtcattaattgaat 8382840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 40739615 - 40739534
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| || ||||   |||||| |||||||||||||| | || |||| |||  || ||||||||||||||||||||    
T  40739615 taagtaaatttgattttttaggttcattcaattaatgatgtatgtggttcatattatggaccacatatatcattaattgaat 40739534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 2795348 - 2795408
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||||||||||| | || |||| |||  || ||||| ||||||||||||||    
T  2795348 attcatttaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaat 2795408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 266
Target Start/End: Complemental strand, 11093632 - 11093568
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaatcaat 266  Q
    ||||||||||||||| ||||||||||||  || |||| || ||||| |||||| | |||||||||    
T  11093632 attcatttaattaattatgtatatagtctttattatagaccacatacatcatttaatgaatcaat 11093568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 24971243 - 24971303
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| || ||||||||||| | ||||||| |||  |||||||| ||||||||||||||    
T  24971243 attcattcaactaatgatgtatgtggtccatattatggactacatacatcattaattgaat 24971303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 29771756 - 29771816
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| |  |||||| ||| ||| ||||| ||||||||||||||    
T  29771756 attcattcaattaatgatgtatgtgatccatattatgaaccacatacatcattaattgaat 29771816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 34240917 - 34240866
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  34240917 aattaatgatgtatgtggtccataatatgaaccacata-atcattaattgaat 34240866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 45123841 - 45123893
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||| |||||||| ||||||||| ||||||| ||||| || |||||||||||    
T  45123841 aattattgatgtatgtagtccatattataaaccacatacattattaattgaat 45123893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 17028334 - 17028275
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  17028334 ttcattcaattaatgatgtatgtggtccatattataaactacatatatcattaattgaat 17028275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 13743896 - 13743956
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  13743896 attcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 13743956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 40952577 - 40952637
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||||| || |||||||||||    
T  40952577 attcattcaattaatgatgtatgtagtctataatataaactacatacattattaattgaat 40952637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 11583746 - 11583805
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| ||||||||| ||||||||||||||    
T  11583746 ttcattcaattaatgatgtatgtggtccataatatgaactacatacatcattaattgaat 11583805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 26206695 - 26206636
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||||||||| | ||||||| ||| ||| ||||||||||||||||||||    
T  26206695 ttcatttaattaatgatgtatgtggtccatattatgaaccacatatatcattaattgaat 26206636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 30162650 - 30162709
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||||||||||||||||||    
T  30162650 ttcattcaattaatgatgtatgtggtccataatatgaaccacatatatcattaattgaat 30162709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 48042630 - 48042689
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||||||||| | ||| ||||||| ||||||||| ||||||||||||||    
T  48042630 ttcatttaattaatgatgtatgtggtctataatatgaactacatacatcattaattgaat 48042689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 44551230 - 44551296
Alignment:
Q  196 ttttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||  | ||| ||||||||||||||    
T  44551230 ttttatattcattgaattaatgatgtatatggtccataatataaatcatatacatcattaattgaat 44551296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 49745562 - 49745505
Alignment:
Q  205 catttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  49745562 catttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 49745505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 2941834 - 2941766
Alignment:
Q  158 agtacttcctccattgtcaattgtaagtaaa-tttaatattttttattcatttaattaatgatgtatat 225  Q
    |||||||||||||||||||||| ||| |||| |||||| ||||  |||||| |||||||||||||||||    
T  2941834 agtacttcctccattgtcaattataattaaattttaattttttaaattcatgtaattaatgatgtatat 2941766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 5048533 - 5048481
Alignment:
Q  206 atttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    |||||||||||||||| | | ||||||| ||||||||||||||||||||||||    
T  5048533 atttaattaatgatgtgtgtggtccatattataaactacatatatcattaatt 5048481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 16450201 - 16450257
Alignment:
Q  206 atttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||| || |  |||||||||||||| ||||||||||||||||||||    
T  16450201 atttaattaatgatgcatgtgatccataatataaaccacatatatcattaattgaat 16450257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 24448683 - 24448755
Alignment:
Q  182 aagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcatt 254  Q
    ||||||| || ||||||| |||||||||||||||||||||||||||||  || ||||||  ||||| ||||||    
T  24448683 aagtaaaatttatattttatattcatttaattaatgatgtatatagtctttattataaatcacatacatcatt 24448755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 53403093 - 53403033
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||||||||||  |  |||||||||||||| ||||| ||||||||||||||    
T  53403093 attcatttaattaatgatgtacgtgatccataatataaaccacatacatcattaattgaat 53403033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 4711507 - 4711448
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||||| |||| | ||||||||||| ||| ||||| ||||||||||||||    
T  4711507 ttcatttaattaatgaagtatgtggtccataatatgaaccacataaatcattaattgaat 4711448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 33084756 - 33084815
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| ||| | ||||||||||||||||||    
T  33084756 ttcattcaattaatgatgtatgtggtccataatatgaaccagatatatcattaattgaat 33084815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 41788960 - 41789019
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  41788960 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 41789019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 43635874 - 43635937
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaatcaa 265  Q
    ||||||| |||||||||||||| | || |||| ||| ||||||||| |||||||||||||||||    
T  43635874 attcattcaattaatgatgtatgtggttcatattatgaactacatacatcattaattgaatcaa 43635937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 44639785 - 44639844
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  44639785 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 44639844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 48079617 - 48079558
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| ||||| |||||||| ||||||||| ||||||| ||||| ||||||||||||||    
T  48079617 ttcattcaattattgatgtatgtagtccatattataaaccacatacatcattaattgaat 48079558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 34458997 - 34459083
Alignment:
Q  176 aattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||| ||||||||||| || ||||   |||||| ||||||  |||||||| |||||| |||| ||| ||||||||||||||||||||    
T  34458997 aattataagtaaatttgattttttaggttcattcaattaaacatgtatatggtccattatatgaaccacatatatcattaattgaat 34459083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 53508540 - 53508598
Alignment:
Q  204 tcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  53508540 tcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 53508598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 53551695 - 53551637
Alignment:
Q  204 tcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  53551695 tcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 53551637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 33659895 - 33659814
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| || ||||   || ||| |||||||||||||| | || ||||||||| |||||||| ||||||||||||||    
T  33659895 taagtaaattttattttttaggtttattcaattaatgatgtatgtggttcataatatatactacatacatcattaattgaat 33659814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 42013163 - 42013244
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| |  ||||  ||||||| |||||||||||||| | ||| ||| ||||||| ||||| ||||||||||||||    
T  42013163 taagtaaattttactttttaaattcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaat 42013244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 11511802 - 11511714
Alignment:
Q  170 attgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    |||| ||||| |||| ||||||||  ||||   ||||||||||||||||||||| | ||||| ||||||||| | ||| ||||||||||    
T  11511802 attgccaattataagcaaatttaactttttaggttcatttaattaatgatgtatgtggtccacaatataaaccatatacatcattaatt 11511714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 19754309 - 19754257
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| |||| ||||||||  || ||||||||||||||||||||    
T  19754309 aattaatgatgtatgtagttcataatatggaccacatatatcattaattgaat 19754257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 19785497 - 19785549
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| |||| ||||||||  || ||||||||||||||||||||    
T  19785497 aattaatgatgtatgtagttcataatatggaccacatatatcattaattgaat 19785549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 24331527 - 24331467
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||||||||||| | || ||||||||| | |||||| || |||||||||||    
T  24331527 attcatttaattaatgatgtatgtggttcataatatagattacatacattattaattgaat 24331467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 25856048 - 25856108
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| |||||||||| | || ||||||||| || ||||| ||||||||||||||    
T  25856048 attcatttaatcaatgatgtatgtggttcataatatagaccacatacatcattaattgaat 25856108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 43635930 - 43635878
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| |||| |||||||| ||| ||||| ||||||||||||||    
T  43635930 aattaatgatgtatgtagttcataatatgaaccacatacatcattaattgaat 43635878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 46779417 - 46779345
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcat 253  Q
    |||| |||||| || ||||  |||||||||||||||||||||| | || |||||||||||| ||||| |||||    
T  46779417 taagcaaattttattttttagattcatttaattaatgatgtatgtggttcataatataaaccacatacatcat 46779345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 17659504 - 17659563
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| | | ||| ||||||||||||||||||||    
T  17659504 ttcattcaattaatgatgtatgtggtccatattttgaaccacatatatcattaattgaat 17659563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 23329471 - 23329412
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| ||||| |||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  23329471 ttcattcaattattgatgtatgtggtccatattataaaccacatacatcattaattgaat 23329412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 23710874 - 23710933
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| ||||| |||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  23710874 ttcattcaattattgatgtatgtggtccatattataaaccacatacatcattaattgaat 23710933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 24529674 - 24529615
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  24529674 ttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaat 24529615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 29978531 - 29978590
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  29978531 ttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaat 29978590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 32112415 - 32112356
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  32112415 ttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaat 32112356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 39294212 - 39294271
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||| ||| | ||||||||||| |||| |||| ||||||||||||||    
T  39294212 ttcattcaattaatgatatatgtggtccataatatgaactgcatacatcattaattgaat 39294271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 39754200 - 39754141
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||||||| || | || |||| |||| |||||||| ||||||||||||||    
T  39754200 ttcatttaattaatgatgcatctggttcatattatagactacatacatcattaattgaat 39754141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 45070935 - 45070880
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    ||||||||||||||||||||| | ||||||||||| ||  ||||| ||||||||||    
T  45070935 ttcatttaattaatgatgtatgtggtccataatatgaataacatacatcattaatt 45070880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 46996575 - 46996520
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    ||||||||||||||||| ||| |||| |||||||| ||| ||||| ||||||||||    
T  46996575 ttcatttaattaatgatttatgtagttcataatatgaaccacatacatcattaatt 46996520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 50038551 - 50038492
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| || |||||| ||| ||| ||||| ||||||||||||||    
T  50038551 ttcattcaattaatgatgtatgtaatccatattatgaaccacatacatcattaattgaat 50038492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 50045773 - 50045714
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| || |||||| ||| ||| ||||| ||||||||||||||    
T  50045773 ttcattcaattaatgatgtatgtaatccatattatgaaccacatacatcattaattgaat 50045714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 51126206 - 51126147
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||| |||||||| || ||||| ||||||||||||||    
T  51126206 ttcattcaattaatgatgtatgtggtctataatatagaccacatacatcattaattgaat 51126147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 54569395 - 54569454
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| || |||||||| || ||||||||||||| ||| ||||| ||||||||||||||    
T  54569395 ttcattcaactaatgatgcatgtagtccataatatgaaccacatacatcattaattgaat 54569454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 55131637 - 55131578
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| ||||||| |||||| |  |||||||||||||| ||||| ||||||||||||||    
T  55131637 ttcattcaattaattatgtatgtgctccataatataaacaacatacatcattaattgaat 55131578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 55501303 - 55501244
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||| ||||| | || |||||||||||| ||||| ||||||||||||||    
T  55501303 ttcattcaattaatggtgtatgtggttcataatataaaccacatacatcattaattgaat 55501244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 19754232 - 19754310
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattg 259  Q
    ||||||||||| |  ||||  ||||||| |||||||||| ||| | ||||||| ||| ||||||||| |||||||||||    
T  19754232 taagtaaattttactttttagattcattcaattaatgatatatgtggtccatattatgaactacatacatcattaattg 19754310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 19785574 - 19785496
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattg 259  Q
    ||||||||||| |  ||||  ||||||| |||||||||| ||| | ||||||| ||| ||||||||| |||||||||||    
T  19785574 taagtaaattttactttttagattcattcaattaatgatatatgtggtccatattatgaactacatacatcattaattg 19785496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 262
Target Start/End: Original strand, 20542799 - 20542901
Alignment:
Q  160 tacttcctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattg 259  Q
    ||||||||||||| | |||| |||||||||||    ||||  ||||||| |||||||||||||| | |   |||||||| || ||||| |||||||||||    
T  20542799 tacttcctccatttttaattataagtaaattttgatttttagattcattcaattaatgatgtatgtgggttataatatagaccacatacatcattaattg 20542898  T
Q  260 aat 262  Q
    |||    
T  20542899 aat 20542901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 49806396 - 49806430
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataata 236  Q
    ||||||||||||||||||||||||||| |||||||    
T  49806396 attcatttaattaatgatgtatatagttcataata 49806430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 21142201 - 21142140
Alignment:
Q  193 atattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcatt 254  Q
    |||||||  |||||||||||||||||||||||| |||  || ||||||||| ||| ||||||    
T  21142201 atattttagattcatttaattaatgatgtatatggtctttattataaactaaatacatcatt 21142140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 268
Target Start/End: Complemental strand, 42184784 - 42184675
Alignment:
Q  159 gtacttcctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    ||||| ||| |||||| |||| ||| |||||||||| ||||  ||||||| ||||||| |||||| |  |  ||||||||||| ||||| ||| ||||||    
T  42184784 gtactcccttcattgttaattataaataaatttaattttttagattcattcaattaataatgtatgtgatttataatataaaccacatacatcgttaatt 42184685  T
Q  259 gaatcaatat 268  Q
     ||| |||||    
T  42184684 aaatgaatat 42184675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 56420532 - 56420475
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattga 260  Q
    |||||| |||||||||||||| ||||||||  ||| ||| ||||| ||||||||||||    
T  56420532 ttcattcaattaatgatgtatgtagtccatgttatgaaccacatacatcattaattga 56420475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 9968395 - 9968343
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  9968395 aattaatgatgtatgtggtccatattattaaccacatacatcattaattgaat 9968343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 11583809 - 11583749
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| |||| |||| |||  || ||||| ||||||||||||||    
T  11583809 attcattcaattaatgatgtatgtagttcatattatggaccacatacatcattaattgaat 11583749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 31262616 - 31262684
Alignment:
Q  186 aaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcatt 254  Q
    |||||||||||||| |||| ||||||| |||||||||| |  || ||| || | |||||||||||||||    
T  31262616 aaatttaatattttatattaatttaataaatgatgtatgtgatctatattaaagactacatatatcatt 31262684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 36721844 - 36721788
Alignment:
Q  206 atttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||| ||||| |||||| | ||||||| ||| |||||||||||||||||| |||||    
T  36721844 atttatttaataatgtatgtggtccatattattaactacatatatcattaaatgaat 36721788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 36786188 - 36786240
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcatt 254  Q
    ||||||| ||||||||||||||||||||  || ||||||| ||||| ||||||    
T  36786188 attcattcaattaatgatgtatatagtctttattataaaccacatacatcatt 36786240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 46996516 - 46996568
Alignment:
Q  206 atttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    |||||||||||||||||| | || |||| ||| ||||||||| ||||||||||    
T  46996516 atttaattaatgatgtatgtggttcatattatgaactacataaatcattaatt 46996568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 50038488 - 50038548
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| | || ||||||||  | |||||| ||||||||||||||    
T  50038488 attcattcaattaatgatgtatgtggttcataatatggattacatacatcattaattgaat 50038548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 50045710 - 50045770
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| | || ||||||||  | |||||| ||||||||||||||    
T  50045710 attcattcaattaatgatgtatgtggttcataatatggattacatacatcattaattgaat 50045770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 54787084 - 54787024
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| ||| |||||||||| | ||| ||||||||||| ||||| |||||| |||||||    
T  54787084 attcattcaatcaatgatgtatgtggtctataatataaaccacatacatcattgattgaat 54787024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 175 - 262
Target Start/End: Original strand, 23783311 - 23783398
Alignment:
Q  175 caattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||| |||| |||||||||  |||  ||||||| |||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||    
T  23783311 caattataagcaaatttaattgtttaaattcattcaattaatgatgtatatggtccataatatgaaccacatacatcattaattgaat 23783398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 38014903 - 38014836
Alignment:
Q  196 ttttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaatc 263  Q
    ||||||||||||| ||||||| |||||| | ||||||||||||||||||||  |||||||||||||||    
T  38014903 ttttttattcattcaattaataatgtatgtggtccataatataaactacatggatcattaattgaatc 38014836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 262
Target Start/End: Complemental strand, 47931833 - 47931732
Alignment:
Q  160 tacttcctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattg 259  Q
    |||| ||||||||| ||||| |||| ||||||||| ||||   || ||| |||||||||||||| ||||||||||||| ||| |||||||||| ||||||    
T  47931833 tactccctccattgccaattataagcaaatttaattttttaggtttattcaattaatgatgtatgtagtccataatatgaaccacatatatca-taattg 47931735  T
Q  260 aat 262  Q
    |||    
T  47931734 aat 47931732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 43898131 - 43898188
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattg 259  Q
    ||||||| |||||||||||||||| ||||||||||| ||| ||||| |||||||||||    
T  43898131 attcattcaattaatgatgtatatggtccataatatgaaccacatacatcattaattg 43898188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 7672731 - 7672791
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||| ||| |||| ||||||||| |||||||| ||||||||||||||    
T  7672731 attcattcaattaatgatatatctagttcataatatagactacataaatcattaattgaat 7672791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 8126168 - 8126228
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||| |||||| |  |||||| ||||||| ||||||||||||||||||||    
T  8126168 attcatttaattaattatgtatgtgatccatattataaaccacatatatcattaattgaat 8126228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 13083973 - 13083913
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||||||||||| |  |||||||||| ||| ||||| ||||||||||||||    
T  13083973 attcatttaattaatgatgtatgtgatccataatatgaacaacatacatcattaattgaat 13083913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 18480915 - 18480971
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattg 259  Q
    ||||||||||||||||||||| | ||||||| ||||||| ||||| |||||||||||    
T  18480915 ttcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattg 18480971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 29076627 - 29076567
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| | |||||| |||||||  ||||||||||||||||||||    
T  29076627 attcattcaattaatgatgtatgtggtccatgatataaatcacatatatcattaattgaat 29076567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 16127787 - 16127846
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  16127787 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 16127846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 32589416 - 32589357
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  32589416 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 32589357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 39530503 - 39530437
Alignment:
Q  196 ttttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  39530503 ttttttgttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaat 39530437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 40326470 - 40326536
Alignment:
Q  196 ttttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||| ||||||| |||||||||||||| | || |||| ||||||| ||||| ||||||||||||||    
T  40326470 tttttgattcattcaattaatgatgtatgtggttcatattataaaccacatacatcattaattgaat 40326536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 26043267 - 26043348
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| |  ||||  ||||||| ||||||||||||| || ||||||| ||| ||| ||||| ||||||||||||||    
T  26043267 taagtaaattttactttttagattcattgaattaatgatgtacatggtccatattatgaaccacatacatcattaattgaat 26043348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 7672795 - 7672735
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||| ||| ||||| ||| ||| ||||| ||||||||||||||||||    
T  7672795 attcattcaattaatgatttatgtagtctatattatgaactagatatatcattaattgaat 7672735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 32833774 - 32833722
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| | ||||||| ||| ||||||||| ||||||||||||||    
T  32833774 aattaatgatgtatgtggtccatattatgaactacatacatcattaattgaat 32833722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 1044024 - 1043965
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||||||||| |  || ||| ||||| ||||||| ||||||||||||||    
T  1044024 ttcatttaattaatgatgtatgtgatctatattataagctacatacatcattaattgaat 1043965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 19679063 - 19679004
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| ||||||||  ||| ||| ||||| ||||||||||||||    
T  19679063 ttcattcaattaatgatgtatgtagtccatgttatgaaccacatacatcattaattgaat 19679004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 21659177 - 21659236
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| |  | ||||||||| || ||||||||||||||||||||    
T  21659177 ttcattcaattaatgatgtatgtgattcataatatagaccacatatatcattaattgaat 21659236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 22995735 - 22995794
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||||||||| | ||  ||||||| ||| ||||| ||||||||||||||    
T  22995735 ttcatttaattaatgatgtatgtggtttataatatgaaccacatacatcattaattgaat 22995794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 32833719 - 32833778
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| |||| ||||||||  || ||||| ||||||||||||||    
T  32833719 ttcattcaattaatgatgtatgtagttcataatatggaccacatacatcattaattgaat 32833778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 40760872 - 40760813
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||| |||||||| |  |||||||||| ||||||||| || |||||||||||    
T  40760872 ttcatttaattattgatgtatgtgatccataatatgaactacatacattattaattgaat 40760813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 42595839 - 42595784
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaat 257  Q
    ||||||| |||||||||||||| | ||||||| ||||||| ||||| |||||||||    
T  42595839 attcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaat 42595784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 44435275 - 44435216
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  44435275 ttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaat 44435216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 256
Target Start/End: Original strand, 46967474 - 46967549
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaa 256  Q
    |||||||| || || |||| |||||||| | |||||||||||| ||||||||| ||| ||| ||||| ||||||||    
T  46967474 taagtaaaatttattttttatattcattcatttaatgatgtatgtagtccatattatgaaccacatacatcattaa 46967549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 51760270 - 51760211
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||||||||| | || |||||||| ||  ||||| ||||||||||||||    
T  51760270 ttcatttaattaatgatgtatgtggttcataatatgaatcacatacatcattaattgaat 51760211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 54680590 - 54680531
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| ||||||||| ||| ||  ||||| ||||||||||||||    
T  54680590 ttcattcaattaatgatgtatgtagtccatattatgaatcacatacatcattaattgaat 54680531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 23005106 - 23005057
Alignment:
Q  213 taatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||| || |||| ||||||  ||||||||||||||||||||    
T  23005106 taatgatgtatatggttcatattataaatcacatatatcattaattgaat 23005057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 29676307 - 29676254
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaa 256  Q
    |||||||| |||||||||||| ||||||||| ||||||  ||||| ||||||||    
T  29676307 ttcatttatttaatgatgtatgtagtccatattataaataacatagatcattaa 29676254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 14626730 - 14626670
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| | || |||||||| ||| ||||| |||||||| |||||    
T  14626730 attcattcaattaatgatgtatgtggttcataatatgaaccacatacatcattaaatgaat 14626670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 34205665 - 34205605
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||||||||||| | ||||||| ||| ||  ||||  ||||||||||||||    
T  34205665 attcatttaattaatgatgtatgtggtccatattatgaatcacatgcatcattaattgaat 34205605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 262
Target Start/End: Original strand, 40504076 - 40504164
Alignment:
Q  174 tcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| ||||||||||| || |||    |||||| |||||||||||||| |  |||||||||||||  ||||| || |||||||||||    
T  40504076 tcaattataagtaaatttgatttttaaggttcattcaattaatgatgtatgtgatccataatataaatcacatacattattaattgaat 40504164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 51204521 - 51204577
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    |||||||||||||||||||||| |  |||||| ||| ||| ||||| ||||||||||    
T  51204521 attcatttaattaatgatgtatgtgatccatattatgaaccacatacatcattaatt 51204577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 51859185 - 51859133
Alignment:
Q  167 tccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgat 219  Q
    |||||||  |||| |||| ||||||||| ||||||||||||| ||||||||||    
T  51859185 tccattgctaattataagcaaatttaattttttttattcattcaattaatgat 51859133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 52638135 - 52638075
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| | ||| ||||||||||  ||||| || |||||||||||    
T  52638135 attcattcaattaatgatgtatgtggtcgataatataaatcacatacattattaattgaat 52638075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 14071 - 14131
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||||| ||| ||| ||||||||||||| ||||||||||||||    
T  14071 attcattcaattaatgatgtatatggtctatattataaactacatagatcattaattgaat 14131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 24733132 - 24733212
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaa 261  Q
    |||| ||||||||| ||||   |||||| ||||||||||||| || ||| ||||||||||| |||||||||||||||||||    
T  24733132 taagcaaatttaattttttaggttcattcaattaatgatgtaaatggtctataatataaaccacatatatcattaattgaa 24733212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 19531992 - 19532051
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||||||||||||| ||||||||||||||    
T  19531992 ttcattcaattaatgatgtatgtggtccatattataaactacatacatcattaattgaat 19532051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 46221179 - 46221120
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  46221179 ttcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 46221120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 46578366 - 46578307
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| |||| |||||||||||| ||||| ||||||||||||||    
T  46578366 ttcattcaattaatgatgtatgtagttcataatataaaccacatacatcattaattgaat 46578307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 11032404 - 11032339
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaatcaatat 268  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| |||||||||||||| |||||    
T  11032404 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaatat 11032339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 27942363 - 27942423
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| ||||||||||||||||  |||||| ||||||| ||||| ||||||||||||||    
T  27942363 attcattcaattaatgatgtatatgatccatattataaaccacatacatcattaattgaat 27942423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 3498395 - 3498336
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  3498395 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 3498336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 9504024 - 9503941
Alignment:
Q  176 aattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattg 259  Q
    |||| |||| ||||||||  ||||  |||||||||||||||||||||| | ||  ||||||| ||||||||| |||||||||||    
T  9504024 aattataagcaaatttaactttttagattcatttaattaatgatgtatgtggtatataatatgaactacatacatcattaattg 9503941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 37066283 - 37066224
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | |||||||||||| || ||||| ||||||||||||||    
T  37066283 ttcattcaattaatgatgtatgtggtccataatatagaccacatacatcattaattgaat 37066224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 46477234 - 46477175
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  46477234 ttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 46477175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 12171754 - 12171705
Alignment:
Q  209 taattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    |||||||||||||||||  |||||| ||||||||||||| ||||||||||    
T  12171754 taattaatgatgtatatgatccatattataaactacatacatcattaatt 12171705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 33471613 - 33471532
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| || ||||   |||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  33471613 taagtaaattttattttttaggttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaat 33471532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 35593658 - 35593739
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| || ||||  ||| ||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  35593658 taagtaaattttattttttagatttattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaat 35593739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 12307855 - 12307915
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||| |||||||||||| || |||||||||| ||| ||||| |||||||| |||||    
T  12307855 attcatttatttaatgatgtatgtaatccataatatgaaccacatacatcattaaatgaat 12307915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 45833292 - 45833232
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||  ||||||||| ||| ||| ||||| ||||||||||||||    
T  45833292 attcattcaattaatgatgtacgtagtccatattatgaaccacatacatcattaattgaat 45833232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 47778531 - 47778471
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| ||||| ||||||||||  ||||| || |||||||||||    
T  47778531 attcattcaattaatgatgtatgtagtcgataatataaatcacatacattattaattgaat 47778471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 24166364 - 24166305
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| || ||||||||||| |  |||||||||| ||| ||||||||||||||||||||    
T  24166364 ttcattcaactaatgatgtatgtgatccataatatgaaccacatatatcattaattgaat 24166305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 48590624 - 48590683
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| ||  ||||| ||||||||||||||    
T  48590624 ttcattaaattaatgatgtatgtggtccataatatgaatcacatacatcattaattgaat 48590683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 225
Target Start/End: Original strand, 29205340 - 29205373
Alignment:
Q  192 aatattttttattcatttaattaatgatgtatat 225  Q
    ||||||||||||||||| ||||||||||||||||    
T  29205340 aatattttttattcattaaattaatgatgtatat 29205373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 31758606 - 31758525
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| || ||||   || |||||||||||||||||| |  | |||||||||||  |||||||| |||||||||||    
T  31758606 taagtaaattttattttttaagtttatttaattaatgatgtatgtgattcataatataaatcacatatattattaattgaat 31758525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 33471507 - 33471588
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||| |||||| || ||||  ||||||| |||||||||||||| | || |||| |||| || ||||| ||||||||||||||    
T  33471507 taagcaaattttattttttagattcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaat 33471588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 35593764 - 35593683
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||| |||||| |||||||   |||||| |||||||||||||| | || ||||||||  || ||||| ||||||||||||||    
T  35593764 taagcaaattttatattttaggttcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaat 35593683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 6250702 - 6250642
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| ||||||||||  |||  |||||||| || |||||||||||| |||||||    
T  6250702 attcatttaataaatgatgtatgcagtatataatatagaccacatatatcatttattgaat 6250642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 21387678 - 21387618
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| |||||||||| | ||  |||||| | |||||||| ||||||||||||||    
T  21387678 attcatttaataaatgatgtatgtggtatataataaagactacatacatcattaattgaat 21387618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 262
Target Start/End: Complemental strand, 31319606 - 31319558
Alignment:
Q  214 aatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||| ||||| |||||| | || ||||||||||||||||||||    
T  31319606 aatgatgtatgtagtctataataaagaccacatatatcattaattgaat 31319558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 32490627 - 32490687
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||||||||||| | ||| |||||| | |||| ||| ||||||||| ||||    
T  32490627 attcatttaattaatgatgtatgttgtctataataaagactatatacatcattaatggaat 32490687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 39024165 - 39024105
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| | ||||||||||| |||||||||| ||||||| ||||| ||||| || |||||    
T  39024165 attcattcatttaatgatgtacatagtccatattataaacaacatacatcatcaaatgaat 39024105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 39970259 - 39970199
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| ||| |||||||||| | ||| ||||||||||| ||||| |||||| |||||||    
T  39970259 attcattcaatcaatgatgtatgtggtctataatataaaccacatacatcattgattgaat 39970199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 46578303 - 46578363
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| | ||  ||| ||| ||||||||| ||||||||||||||    
T  46578303 attcattcaattaatgatgtatgtggtttatattatgaactacatacatcattaattgaat 46578363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 46658834 - 46658774
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| |  |||||| ||| || |||||| ||||||||||||||    
T  46658834 attcattcaattaatgatgtatgtgttccatattatgaattacatacatcattaattgaat 46658774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 48392904 - 48392964
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||| |||||||| |  | ||||||||| || ||||| ||||||||||||||    
T  48392904 attcatttaattagtgatgtatgtgattcataatatataccacatacatcattaattgaat 48392964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 6169848 - 6169908
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||||||||||| ||||| ||||||| ||| ||||| ||||||||||||||    
T  6169848 attcatttaattaatgatgtatgtagtcaataatattaaccacatacatcattaattgaat 6169908  T

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Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 50998405 - 50998346
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||||||||||||||||| ||| | ||| ||||||||||||||    
T  50998405 ttcattcaattaatgatgtatatagtccataatatgaaccaaatacatcattaattgaat 50998346  T

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Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 268
Target Start/End: Complemental strand, 52253661 - 52253574
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaatcaatat 268  Q
    ||||||||||| || ||||  ||||||| ||||||||||| || ||||||||| ||||||  ||||| |||||||||||||| |||||    
T  52253661 taagtaaattttattttttaaattcattcaattaatgatgcatgtagtccatattataaatcacatacatcattaattgaatgaatat 52253574  T

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Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 26453103 - 26453030
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcatt 254  Q
    |||| |||| |||| ||||  ||||||| |||||||||||||||| ||||||||||| ||| ||||||||||||    
T  26453103 taagcaaatgtaattttttagattcattcaattaatgatgtatatggtccataatatgaaccacatatatcatt 26453030  T

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Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 12062295 - 12062236
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||| ||| ||||||||||||||||||||    
T  12062295 ttcattgaattaatgatgtatgtggtccatattatgaaccacatatatcattaattgaat 12062236  T

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Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 21852538 - 21852479
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| |  |||||||||| ||| ||||||||||||||||||||    
T  21852538 ttcattcaattaatgatgtatgtgatccataatatgaaccacatatatcattaattgaat 21852479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 24023466 - 24023407
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||||||||||  || |||||||| ||| || |||||||||||||||||    
T  24023466 ttcatttaattaatgatgtatacggttcataatatgaaccacgtatatcattaattgaat 24023407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 24478766 - 24478707
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||||||||| | ||  |||||||| || ||||||||||||||||||||    
T  24478766 ttcatttaattaatgatgtatgtggtttataatatagaccacatatatcattaattgaat 24478707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 47293180 - 47293242
Alignment:
Q  160 tacttcctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgta 222  Q
    |||| ||||| ||| ||||| |||||||||||||| ||||  |||||||||||||||||||||    
T  47293180 tactccctccgttgccaattataagtaaatttaattttttagattcatttaattaatgatgta 47293242  T

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Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 38824308 - 38824389
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||| |||||| || |||| | |||||| |||||||||||||| | || ||||||||| || ||||| ||||||||||||||    
T  38824308 taagcaaattttattttttatgttcattcaattaatgatgtatgtggttcataatatagaccacatacatcattaattgaat 38824389  T

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Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 39216206 - 39216145
Alignment:
Q  201 tattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||| ||||||||||||||||||||  || |||| || ||||| ||||||||||||||    
T  39216206 tattcattcaattaatgatgtatatagtctttattatagacaacatacatcattaattgaat 39216145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 45239008 - 45239089
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| |  ||||  ||||||||||| |||||||||| | || ||||||||| || ||||| ||||||||||||||    
T  45239008 taagtaaattttactttttagattcatttaatcaatgatgtatgtggttcataatatagaccacatacatcattaattgaat 45239089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 12993618 - 12993566
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  12993618 aattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 12993566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 17622809 - 17622857
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    ||||||||||||||||| |||||||||| ||||||||  ||||||||||    
T  17622809 aattaatgatgtatataatccataatatgaactacatgcatcattaatt 17622857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 21909887 - 21909939
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| | ||||||| ||| ||||||||| ||||||||||||||    
T  21909887 aattaatgatgtatgtggtccatattatgaactacatacatcattaattgaat 21909939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 23079449 - 23079398
Alignment:
Q  206 atttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    |||||||||||||||||| | ||||||||||||||||| ||| ||||||||||    
T  23079449 atttaattaatgatgtatgt-gtccataatataaactaaatacatcattaatt 23079398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 33738209 - 33738261
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  33738209 aattaatgatgtatgtggtccatattataaaccacatacatcattaattgaat 33738261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 37255164 - 37255224
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  37255164 attcattcaattaatgatgtatgtggtccatattattaaccacatacatcattaattgaat 37255224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 1252232 - 1252173
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||  | ||||||||||| ||| ||||| ||||||||||||||    
T  1252232 ttcattcaattaatgatgtacgtggtccataatatgaaccacatacatcattaattgaat 1252173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 4683038 - 4682979
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  4683038 ttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaat 4682979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 15311511 - 15311570
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| | |||||||||||| | ||||||| ||||||||||||| |||||||| |||||    
T  15311511 ttcattcatttaatgatgtatgtggtccatattataaactacatacatcattaaatgaat 15311570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 17310457 - 17310516
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||||| ||| |||||| |||  | ||||||||||||||||||    
T  17310457 ttcattcaattaatgatgtatatggtctataatacaaatcatatatatcattaattgaat 17310516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 27549084 - 27549143
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| ||| ||| ||||| ||||||||||||||    
T  27549084 ttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaat 27549143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 31909788 - 31909847
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||| ||| ||||||| ||||| ||||||||||||||    
T  31909788 ttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaat 31909847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 40341769 - 40341824
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    |||||| |||||||||||||| ||||||||  ||||||| ||||| ||||||||||    
T  40341769 ttcattcaattaatgatgtatgtagtccatgttataaaccacatacatcattaatt 40341824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 225
Target Start/End: Complemental strand, 43738719 - 43738684
Alignment:
Q  190 ttaatattttttattcatttaattaatgatgtatat 225  Q
    |||||||||| |||||||||||||||||||||||||    
T  43738719 ttaatattttatattcatttaattaatgatgtatat 43738684  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 48605109 - 48605168
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| ||  ||||| ||||||||||||||    
T  48605109 ttcattcaattaatgatgtatgtggtccataatatgaatcacatacatcattaattgaat 48605168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 262
Target Start/End: Original strand, 1358213 - 1358270
Alignment:
Q  205 catttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||||||| | ||||||| ||| ||| ||||| ||||||| ||||||    
T  1358213 catttaattaatgatgtatgtggtccatattatgaaccacatacatcattagttgaat 1358270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 5852779 - 5852730
Alignment:
Q  213 taatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  5852779 taatgatgtatgtggtccatattataaaccacatacatcattaattgaat 5852730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 6763383 - 6763432
Alignment:
Q  213 taatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  6763383 taatgatgtatttggtccatattataaaccacatacatcattaattgaat 6763432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 262
Target Start/End: Original strand, 46517994 - 46518043
Alignment:
Q  213 taatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||| | ||||||| ||||||| ||||| ||||||||||||||    
T  46517994 taatgatgtatgtggtccatattataaaccacatacatcattaattgaat 46518043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 47293345 - 47293292
Alignment:
Q  209 taattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||||||||||| |  |||||||||| ||| ||||| ||||||||||||||    
T  47293345 taattaatgatgtatgtgatccataatatgaaccacatacatcattaattgaat 47293292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 52879987 - 52879926
Alignment:
Q  201 tattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||| |||||||||||||| | |||||||||||   | ||||| ||||||||||||||    
T  52879987 tattcattcaattaatgatgtatgtggtccataatatggtccacatacatcattaattgaat 52879926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 6758584 - 6758644
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| ||||||||||||||||||||  || |||| || || || ||||||||||||||    
T  6758584 attcattcaattaatgatgtatatagtctttattatagacaacgtacatcattaattgaat 6758644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 12447556 - 12447496
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| |  |||||||||| ||| ||| | ||||||||||||||    
T  12447556 attcattcaattaatgatgtatgtgatccataatatgaaccacaaacatcattaattgaat 12447496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 21909935 - 21909883
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| |||| ||||||||  || ||||| ||||||||||||||    
T  21909935 aattaatgatgtatgtagttcataatatggaccacatacatcattaattgaat 21909883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 26423526 - 26423470
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    |||||||||||||||||||||| | || |||| | ||||| ||||| ||||||||||    
T  26423526 attcatttaattaatgatgtatgtggttcatattgtaaaccacatacatcattaatt 26423470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 262
Target Start/End: Complemental strand, 34598992 - 34598904
Alignment:
Q  174 tcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| ||||||||||| |  ||||  ||||||| ||||||||||||||||  | |||| ||| ||| ||||| ||||||| ||||||    
T  34598992 tcaattataagtaaatttgactttttagattcattcaattaatgatgtatatgattcatattatgaaccacatacatcattatttgaat 34598904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 38824393 - 38824333
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| | ||| ||| ||| ||| ||||| ||||||||||||||    
T  38824393 attcattcaattaatgatgtatgtggtctatattatgaaccacatacatcattaattgaat 38824333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 39216143 - 39216207
Alignment:
Q  204 tcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaatcaatat 268  Q
    ||||| |||||||||||||| | ||| |||||| | |||| ||| |||||||||||||| |||||    
T  39216143 tcattcaattaatgatgtatgttgtctataataaagactatatacatcattaattgaatgaatat 39216207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 40341832 - 40341772
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||||||||||| | ||  |||| ||  |||||||| ||||||||||||||    
T  40341832 attcatttaattaatgatgtatgtggtttataacatggactacatacatcattaattgaat 40341772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 41154950 - 41155002
Alignment:
Q  206 atttaattaatgatgtatatagtccataatataaactacatatatcattaatt 258  Q
    |||||||||||||| |||||| ||||||||||| |   |||||||||||||||    
T  41154950 atttaattaatgatatatataatccataatatagatcgcatatatcattaatt 41155002  T

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Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 42140371 - 42140428
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||||| ||| |||||||  || ||||| ||||||||||||||    
T  42140371 ttcattcaattaatgatgtatatggtctataatat--accacatacatcattaattgaat 42140428  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 667829 - 667770
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| ||||||||| ||||||||| ||||    
T  667829 ttcattcaattaatgatgtatgtggtccataatatgaactacatacatcattaatggaat 667770  T

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Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 32786217 - 32786158
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  32786217 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 32786158  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 262
Target Start/End: Original strand, 31577435 - 31577537
Alignment:
Q  160 tacttcctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattg 259  Q
    |||||||| |||| | || | |||| |||||| || ||||  ||||||| ||||||| |||||| || |||||| ||| ||||||||| |||||||||||    
T  31577435 tacttccttcattttaaaatataagcaaattttattttttagattcattcaattaattatgtatgtaatccatattatgaactacatacatcattaattg 31577534  T
Q  260 aat 262  Q
    |||    
T  31577535 aat 31577537  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 3212335 - 3212283
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| | ||||||||||||||  ||||| ||||||||||||||    
T  3212335 aattaatgatgtatgtggtccataatataaatcacatacatcattaattgaat 3212283  T

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Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 14804264 - 14804207
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||||  ||||||| ||||||| ||||| ||||||||||||||    
T  14804264 ttcattcaattaatgatgtata--gtccatattataaaccacatacatcattaattgaat 14804207  T

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Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 29938388 - 29938448
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| | |||||||||||| | ||||||||||| ||||||||| |||||||| |||||    
T  29938388 attcattcatttaatgatgtatgtggtccataatatgaactacatacatcattaaatgaat 29938448  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 3343816 - 3343875
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| ||| ||||| |||| |||||||||    
T  3343816 ttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcaataattgaat 3343875  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 3418795 - 3418854
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||||| || |||||||| ||| ||||| || |||||||||||    
T  3418795 ttcattcaattaatgatgtatatggttcataatatgaaccacatacattattaattgaat 3418854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 21478654 - 21478595
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||| ||||||| ||| ||||| ||||||||||||||    
T  21478654 ttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaat 21478595  T

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Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 31759425 - 31759366
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||||||| |||  |||| ||||||||||||||    
T  31759425 ttcattcaattaatgatgtatgtggtccataatatgaaccgcatacatcattaattgaat 31759366  T

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Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 6047994 - 6048054
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| |   ||||||||| ||| ||||| ||||||||||||||    
T  6047994 attcattcaattaatgatgtatgtgacccataatatgaaccacatacatcattaattgaat 6048054  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 21478591 - 21478651
Alignment:
Q  202 attcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||||||||||||| | || |||| |||| || ||||| ||||||||||||||    
T  21478591 attcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaat 21478651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 33169276 - 33169224
Alignment:
Q  210 aattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||||||||||| | ||||||| ||||||| ||||| || |||||||||||    
T  33169276 aattaatgatgtatgtggtccatattataaaccacatacattattaattgaat 33169224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 5511 - 5430
Alignment:
Q  181 taagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||| |||||| | |||||  |||||||||||||||||||||| | ||  |||||||| || ||||| ||||||||||||||    
T  5511 taagaaaattttacattttagattcatttaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaat 5430  T

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Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 262
Target Start/End: Original strand, 58301 - 58398
Alignment:
Q  165 cctccattgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||| ||| ||||| |||| ||||||||  ||||   |||||| ||| |||||||||| | ||||||||||| ||| ||||| ||||||||||||||    
T  58301 cctccgttgccaattataagcaaatttaactttttaagttcattcaatcaatgatgtatgtggtccataatatgaaccacatacatcattaattgaat 58398  T

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Target: scaffold0172 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 11623 - 11682
Alignment:
Q  203 ttcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    |||||| |||||||||||||| | ||||||| |||| || ||||| ||||||||||||||    
T  11623 ttcattcaattaatgatgtatgtggtccatattatagaccacatacatcattaattgaat 11682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 261
Target Start/End: Original strand, 54641 - 54731
Alignment:
Q  171 ttgtcaattgtaagtaaatttaatattttttattcatttaattaatgatgtatatagtccataatataaactacatatatcattaattgaa 261  Q
    ||||||||| ||| |||||||||| |||| | ||| || |||||||||||||| | ||||| ||||| ||| | ||| || ||||||||||    
T  54641 ttgtcaattataaataaatttaattttttatgttcgttcaattaatgatgtatgtggtccacaatatgaaccatatacattattaattgaa 54731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 44642 - 44698
Alignment:
Q  206 atttaattaatgatgtatatagtccataatataaactacatatatcattaattgaat 262  Q
    ||||||| |||| ||||| ||||||||| |||| || |||||||||||| |||||||    
T  44642 atttaataaatggtgtatgtagtccatattatagacgacatatatcatttattgaat 44698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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