View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14738_high_17 (Length: 294)
Name: NF14738_high_17
Description: NF14738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14738_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 29 - 287
Target Start/End: Complemental strand, 25601328 - 25601070
Alignment:
| Q |
29 |
gtagctccaacaacaacatttacaatctgtcaaacaaaactaacaaccttctctaaataatgaaatcccttcttgtcaattgtttttaatgaagaaatct |
128 |
Q |
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| T |
25601328 |
gtagctccaacaacaacatttacaatctgtcaaacaaaactaacaaccttctctaaataatgaaatcccttcttgtcaattttttttaatgaagaaatat |
25601229 |
T |
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| Q |
129 |
cttacatatctctaatgtattcaacaaattatcatcaaacatctcaatataaaatgatcatcaatatgactctatcctcacattacaaaattgaatgaaa |
228 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25601228 |
cttacatatctctaatgtattcaacaaattatcatcaaacatctcaatataaaatgatcatcaatatgactctatcctcacattacaaaattgaatgaaa |
25601129 |
T |
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| Q |
229 |
gctattttttcaactttgtatatcgttgatgattgattgttttgtaacttaagccctat |
287 |
Q |
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|||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||| |
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| T |
25601128 |
gctattttttcaactttgtatatcattgttgattgattgttttataacttaagccctat |
25601070 |
T |
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