View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14738_high_23 (Length: 248)
Name: NF14738_high_23
Description: NF14738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14738_high_23 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 38903610 - 38903832
Alignment:
| Q |
18 |
accaaggaggagagacaatgcaaaccagatgaaaatcgatttgagcggttcagattggaacacgaagaaagcgagaccgaagaagattgaagagattgaa |
117 |
Q |
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| T |
38903610 |
accaaggaggagagacaatgcaaaccagatgaaaatcgatttgagcggctcagattggaacacgaagaaagcgagaccgaagaagattgaagagattgaa |
38903709 |
T |
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| Q |
118 |
aaggttacagcgatgaacgatttcgttggtttctgataaggctgtgattcagtggccgccggtgcaccggactgatacaggaacttcggtttcgcgtctt |
217 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38903710 |
aaggttacagcgatgaacgatttcgttggtttctggtaaggctgtgattcagtggccgccggtgcaccggactgatacaggaacttcggtttcgcgtctt |
38903809 |
T |
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| Q |
218 |
cgtctaagaattccattcttctc |
240 |
Q |
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||||||||||||||||||||||| |
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| T |
38903810 |
cgtctaagaattccattcttctc |
38903832 |
T |
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