View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14738_high_24 (Length: 246)
Name: NF14738_high_24
Description: NF14738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14738_high_24 |
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Alignment Details
Target: chr1 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 9911654 - 9911808
Alignment:
| Q |
80 |
ttttatttcatctggtctagtatcaaatcagaatattttgtcattttagaaagctcttttttagcttttgggaaatggcataaatatgaatttttggaaa |
179 |
Q |
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| T |
9911654 |
ttttattccatctggtctagtatcaaatcagaatattttgttattttagaaagctcttttatagcttttgggaaatggcataaatatgaatttttggaaa |
9911753 |
T |
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| Q |
180 |
gatatttggcgcggtccttccttatttctctatctcaacgttcctatgaatcaac |
234 |
Q |
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| T |
9911754 |
gatatttggtgtggtccttccttatttctctatctcaacattcctatgaatcaac |
9911808 |
T |
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