View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14738_low_30 (Length: 240)
Name: NF14738_low_30
Description: NF14738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14738_low_30 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 45 - 240
Target Start/End: Original strand, 17003004 - 17003199
Alignment:
| Q |
45 |
tgattctcacagaacaaattctatgctatactatctcagtctctaatcataaaactccttcggaaacaagtcaggatgacacaaacagactatattgtta |
144 |
Q |
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| T |
17003004 |
tgattctcacagaacaaattctatgctatactatctctgtttctaatcataaaactccttcggaaacaaggcaggatgacacaaacagactatattgtta |
17003103 |
T |
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| Q |
145 |
aagcaggatgacacaaacattatactaatatttctaattttcaacttatttcatggaaataaagaaaagtatgaacctgtgtagaagttttattgt |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17003104 |
aagcaggatgacacaaacattatactaatatttctaattttcaacttatttcatggaaataaagaaaagtatgaacctgtgtagaagttttattgt |
17003199 |
T |
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