View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14739_high_8 (Length: 417)
Name: NF14739_high_8
Description: NF14739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14739_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 305; Significance: 1e-171; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 23 - 364
Target Start/End: Original strand, 17892153 - 17892496
Alignment:
| Q |
23 |
tcatgcatttaccttccaatccactacttccctctgcctctcttttgaaaatgaataaagaatcattcaaggactaaaacacatatattaaacatcattc |
122 |
Q |
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| T |
17892153 |
tcatgcatttaccttccaatccactatttccctctgcctctcttttgaaaatgaataaagaatcattcaaggactaaaacacatatattaaacatcattc |
17892252 |
T |
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| Q |
123 |
caattgaaactatttatttaaaagaataataaatattcatccattaatgtaaaacatcagtatgaaaatattgaatcttgcgataaataagttcaaatta |
222 |
Q |
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| T |
17892253 |
caattgaaactatttatttaaaaaaataataaatattcatccattaatgtaaaacatcagtatgaaaatatttaatcttgcgataaataagttcaaatta |
17892352 |
T |
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| Q |
223 |
taaagtataattcaactatgttatttgtaaaaggaataatttttgtgaccctatggtaaaaataatttcactcattctcagattaacctaagtgatcatc |
322 |
Q |
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|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
17892353 |
taaagtataatttaactatgttgtttgtaaaaggaataatttttgtgaccctatggtaaaaataatttcactcatcctcagattaacctaagtgatcatc |
17892452 |
T |
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| Q |
323 |
ctctagtaa--atattcatattgcctttggagaaatgatcctct |
364 |
Q |
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| T |
17892453 |
ctctaataaatatattcatattgcctttggagaaatgatcctct |
17892496 |
T |
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