View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14739_low_1 (Length: 913)

Name: NF14739_low_1
Description: NF14739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14739_low_1
NF14739_low_1
[»] chr8 (19 HSPs)
chr8 (210-897)||(45152707-45153403)
chr8 (17-149)||(45151177-45151309)
chr8 (300-348)||(43848021-43848069)
chr8 (299-339)||(45140829-45140869)
chr8 (297-336)||(39319430-39319469)
chr8 (299-336)||(31497448-31497485)
chr8 (299-339)||(11740473-11740513)
chr8 (303-339)||(32541975-32542011)
chr8 (297-336)||(7379882-7379921)
chr8 (297-332)||(44264341-44264376)
chr8 (303-345)||(44826701-44826743)
chr8 (303-336)||(1893229-1893262)
chr8 (303-336)||(8435812-8435845)
chr8 (283-332)||(9211773-9211822)
chr8 (303-336)||(17116299-17116332)
chr8 (303-336)||(25024139-25024172)
chr8 (303-336)||(31582507-31582540)
chr8 (303-336)||(31687411-31687444)
chr8 (303-336)||(41693372-41693405)
[»] chr1 (31 HSPs)
chr1 (283-338)||(18346743-18346798)
chr1 (299-339)||(2498642-2498682)
chr1 (300-336)||(28867855-28867891)
chr1 (300-336)||(31149790-31149826)
chr1 (303-338)||(15314031-15314066)
chr1 (303-337)||(7710310-7710344)
chr1 (303-337)||(38966828-38966862)
chr1 (301-339)||(52702367-52702405)
chr1 (303-336)||(323626-323659)
chr1 (303-336)||(1918834-1918867)
chr1 (303-336)||(13120941-13120974)
chr1 (303-336)||(19898242-19898275)
chr1 (299-336)||(23710776-23710813)
chr1 (303-336)||(26205085-26205118)
chr1 (303-336)||(29379788-29379821)
chr1 (303-336)||(29586944-29586977)
chr1 (303-336)||(29683486-29683519)
chr1 (303-336)||(29703527-29703560)
chr1 (303-336)||(30780077-30780110)
chr1 (303-336)||(32367710-32367743)
chr1 (303-336)||(33561201-33561234)
chr1 (211-252)||(34087672-34087713)
chr1 (303-336)||(36300425-36300458)
chr1 (303-336)||(36838023-36838056)
chr1 (281-338)||(38596821-38596878)
chr1 (303-336)||(39827350-39827383)
chr1 (303-336)||(41150568-41150601)
chr1 (303-336)||(42063612-42063645)
chr1 (303-336)||(44910608-44910641)
chr1 (299-336)||(46370465-46370502)
chr1 (299-336)||(49219789-49219826)
[»] chr7 (19 HSPs)
chr7 (297-339)||(27089029-27089071)
chr7 (297-339)||(27189230-27189272)
chr7 (303-341)||(43254945-43254983)
chr7 (299-336)||(9488161-9488198)
chr7 (299-336)||(19831450-19831487)
chr7 (299-336)||(36436884-36436921)
chr7 (303-339)||(21254000-21254036)
chr7 (210-252)||(47584891-47584933)
chr7 (303-345)||(48831412-48831454)
chr7 (303-336)||(790609-790642)
chr7 (299-336)||(21375373-21375410)
chr7 (303-336)||(21745138-21745171)
chr7 (303-336)||(31512036-31512069)
chr7 (299-336)||(33027609-33027646)
chr7 (303-336)||(33203005-33203038)
chr7 (303-336)||(36245744-36245777)
chr7 (303-336)||(42375156-42375189)
chr7 (303-336)||(42586749-42586782)
chr7 (303-336)||(45686224-45686257)
[»] chr5 (33 HSPs)
chr5 (299-338)||(7652307-7652346)
chr5 (283-333)||(23921758-23921808)
chr5 (303-336)||(9160030-9160063)
chr5 (299-339)||(11663262-11663302)
chr5 (303-339)||(12714065-12714101)
chr5 (303-339)||(12775293-12775329)
chr5 (303-339)||(13156236-13156272)
chr5 (304-339)||(27868188-27868223)
chr5 (303-338)||(43403246-43403281)
chr5 (303-337)||(5381185-5381219)
chr5 (210-252)||(6350208-6350250)
chr5 (303-337)||(6603263-6603297)
chr5 (303-337)||(19955659-19955693)
chr5 (210-252)||(22653371-22653413)
chr5 (303-337)||(24801575-24801609)
chr5 (299-333)||(32381016-32381050)
chr5 (299-336)||(1710555-1710592)
chr5 (303-336)||(2672185-2672218)
chr5 (303-336)||(5997248-5997281)
chr5 (303-336)||(8023286-8023319)
chr5 (303-336)||(8285589-8285622)
chr5 (303-336)||(11061820-11061853)
chr5 (283-336)||(11099920-11099973)
chr5 (303-336)||(13227903-13227936)
chr5 (303-336)||(14646717-14646750)
chr5 (303-336)||(15531215-15531248)
chr5 (303-336)||(16856321-16856354)
chr5 (303-336)||(19526508-19526541)
chr5 (303-336)||(32383614-32383647)
chr5 (303-336)||(35235081-35235114)
chr5 (303-336)||(35235895-35235928)
chr5 (303-336)||(36686602-36686635)
chr5 (303-336)||(39276182-39276215)
[»] chr2 (29 HSPs)
chr2 (297-336)||(2265487-2265526)
chr2 (297-336)||(9263667-9263706)
chr2 (297-336)||(16487642-16487681)
chr2 (299-336)||(3378132-3378169)
chr2 (299-336)||(8340549-8340586)
chr2 (299-336)||(17263120-17263157)
chr2 (303-336)||(41796071-41796104)
chr2 (299-336)||(44276532-44276569)
chr2 (303-339)||(7399615-7399651)
chr2 (297-337)||(39675994-39676034)
chr2 (297-336)||(40868693-40868732)
chr2 (210-252)||(2759515-2759557)
chr2 (303-337)||(13527266-13527300)
chr2 (303-337)||(36711837-36711871)
chr2 (210-252)||(38843483-38843525)
chr2 (303-336)||(2545752-2545785)
chr2 (303-336)||(4452855-4452888)
chr2 (303-336)||(5040546-5040579)
chr2 (303-336)||(8687727-8687760)
chr2 (303-336)||(8705837-8705870)
chr2 (303-336)||(9887745-9887778)
chr2 (303-336)||(15569956-15569989)
chr2 (299-336)||(18212851-18212888)
chr2 (303-336)||(21866022-21866055)
chr2 (303-336)||(24401448-24401481)
chr2 (303-336)||(28381979-28382012)
chr2 (299-339)||(38578371-38578412)
chr2 (303-336)||(41323564-41323597)
chr2 (303-336)||(43136413-43136446)
[»] scaffold0016 (2 HSPs)
scaffold0016 (283-333)||(85059-85109)
scaffold0016 (303-336)||(92843-92876)
[»] scaffold1526 (1 HSPs)
scaffold1526 (299-336)||(1364-1401)
[»] chr4 (30 HSPs)
chr4 (299-336)||(3010448-3010485)
chr4 (297-334)||(16398447-16398484)
chr4 (299-336)||(23867249-23867286)
chr4 (303-336)||(37114637-37114670)
chr4 (299-336)||(47416882-47416919)
chr4 (303-339)||(4938693-4938729)
chr4 (303-339)||(18583603-18583639)
chr4 (303-339)||(25439852-25439888)
chr4 (303-339)||(33004418-33004454)
chr4 (303-338)||(11601450-11601485)
chr4 (281-336)||(40120645-40120700)
chr4 (303-338)||(45906912-45906947)
chr4 (297-328)||(56544950-56544981)
chr4 (210-252)||(4390908-4390950)
chr4 (303-337)||(27397099-27397133)
chr4 (303-337)||(29414276-29414310)
chr4 (299-333)||(35821629-35821663)
chr4 (210-252)||(55685615-55685657)
chr4 (303-336)||(4392068-4392101)
chr4 (303-336)||(7707151-7707184)
chr4 (303-336)||(8942653-8942686)
chr4 (303-336)||(11151266-11151299)
chr4 (303-336)||(21370579-21370612)
chr4 (303-336)||(22037695-22037728)
chr4 (303-336)||(27184970-27185003)
chr4 (303-336)||(31679629-31679662)
chr4 (303-336)||(42117618-42117651)
chr4 (303-336)||(43225063-43225096)
chr4 (303-336)||(53407933-53407966)
chr4 (303-336)||(56373222-56373255)
[»] chr3 (28 HSPs)
chr3 (299-336)||(37713316-37713353)
chr3 (299-339)||(16126520-16126560)
chr3 (299-339)||(44748201-44748241)
chr3 (303-335)||(50316504-50316536)
chr3 (299-338)||(30549292-30549331)
chr3 (297-336)||(54541388-54541427)
chr3 (210-252)||(20451120-20451162)
chr3 (299-337)||(52795669-52795707)
chr3 (303-336)||(2579341-2579374)
chr3 (303-336)||(2852678-2852711)
chr3 (303-336)||(29080619-29080652)
chr3 (303-336)||(29717566-29717599)
chr3 (303-336)||(33392466-33392499)
chr3 (303-336)||(37089042-37089075)
chr3 (303-336)||(37528085-37528118)
chr3 (303-336)||(38186544-38186577)
chr3 (303-336)||(38891367-38891400)
chr3 (299-336)||(39470619-39470656)
chr3 (303-336)||(40479406-40479439)
chr3 (303-336)||(40562677-40562710)
chr3 (297-334)||(42218398-42218435)
chr3 (303-336)||(45344381-45344414)
chr3 (299-336)||(49852616-49852653)
chr3 (299-336)||(50500554-50500591)
chr3 (303-336)||(52858677-52858710)
chr3 (211-252)||(52867586-52867627)
chr3 (303-336)||(54671570-54671603)
chr3 (303-336)||(55227126-55227159)
[»] scaffold0031 (1 HSPs)
scaffold0031 (303-339)||(129500-129536)
[»] scaffold0027 (1 HSPs)
scaffold0027 (303-339)||(41060-41096)
[»] chr6 (14 HSPs)
chr6 (303-339)||(6709044-6709080)
chr6 (299-334)||(30810545-30810580)
chr6 (210-252)||(11016305-11016347)
chr6 (210-252)||(28077140-28077182)
chr6 (303-337)||(34232221-34232255)
chr6 (303-336)||(559094-559127)
chr6 (303-336)||(1805721-1805754)
chr6 (303-336)||(2443207-2443240)
chr6 (299-336)||(10856871-10856908)
chr6 (303-336)||(12432025-12432058)
chr6 (303-336)||(27719942-27719975)
chr6 (303-336)||(28721115-28721148)
chr6 (303-336)||(32732566-32732599)
chr6 (303-336)||(34684372-34684405)
[»] scaffold0197 (1 HSPs)
scaffold0197 (303-342)||(28358-28397)
[»] scaffold0122 (1 HSPs)
scaffold0122 (303-337)||(11782-11816)
[»] scaffold0009 (1 HSPs)
scaffold0009 (210-252)||(192728-192770)
[»] scaffold0362 (1 HSPs)
scaffold0362 (303-336)||(6182-6215)
[»] scaffold0349 (1 HSPs)
scaffold0349 (303-336)||(9364-9397)
[»] scaffold0246 (1 HSPs)
scaffold0246 (303-336)||(7810-7843)
[»] scaffold0116 (1 HSPs)
scaffold0116 (303-336)||(25677-25710)
[»] scaffold0002 (1 HSPs)
scaffold0002 (303-336)||(432033-432066)


Alignment Details
Target: chr8 (Bit Score: 397; Significance: 0; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 210 - 897
Target Start/End: Original strand, 45152707 - 45153403
Alignment:
Q  210 tcattttacatttgtcagctagttgatccgcttattttaccaacaactgcctttagcgtatcagttatctttcatcagtcattatcgataagctatcagc 309  Q
    ||||||||||||| |||||||||||| ||| | ||||||||||  ||| | |||||| |||||||||||| ||||||||||| | | |||| ||||||||    
T  45152707 tcattttacatttatcagctagttgaaccgttaattttaccaaacacttcatttagcttatcagttatctatcatcagtcatcaactataaactatcagc 45152806  T
Q  310 tatctgctatttttaccaaacagagccatacttttttatgctttatgttaacagatcctatctagtttgtttgagacagaaataaataacagaggggtct 409  Q
    ||| |||||||||||| |||||||| |||| ||||||||||||| |||||| ||| ||||||||||| |||||||||||||||||||||||||||||| |    
T  45152807 tatatgctatttttacgaaacagagacatatttttttatgctttctgttaatagaccctatctagttagtttgagacagaaataaataacagaggggtgt 45152906  T
Q  410 ttggtttaaaaggggaatgc---------------atttagattttctcatcttcgtcttgtatctttctaatactgagttagtgattggggtttcttaa 494  Q
    |||||||||||||||||||                |||||||||| ||||||||||||||||||||||||||||||||| ||| || |||||||||||||    
T  45152907 ttggtttaaaaggggaatgttgtgggtctgtatgtatttagatttcctcatcttcgtcttgtatctttctaatactgagctagcgactggggtttcttaa 45153006  T
Q  495 atgaaataacttttatttcagtcaattctgattgagttctattctatcatagtatcacttccctccttgtcataatttcagcatataagtatagactgca 594  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  45153007 atgaaatatcttttatttcagtcaattctgattgagttctattctatcatagtatcactttcctcctcgtcataatttcagcttataagtatagactgca 45153106  T
Q  595 tgcctgccatttatttccatgcatttggcttttatctttatatttgacatgtatacataatgca-gcaagaagttcaattgctgtgaataatttcatgtg 693  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||   ||    
T  45153107 tgcctgccatttatttccatgcaattggcttttgtctttatatttgacatgtatacataatgcaggcaagaagttcaattgcgaagaataatttc---tg 45153203  T
Q  694 tgttgtttaatcacttagctttatttctctcaagggtttcaaatagatggtggcccctccatcgacaaagagtcctgcattttacacnnnnnnngtctat 793  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||       |||| |    
T  45153204 tgttgttcaatcacttagctttatttctctcaagggtttcaaata---agtggcccctccatcgacaaagagtcctgcgttttacactttgtttgtctgt 45153300  T
Q  794 ctgtctgcaaagttttttgtacataggtgccaatgagctaatatctgcttaactggttttataataaacaaatgtgataataataagttgtttttatcat 893  Q
    |||||| ||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||| |||| |||||| |||||||||    
T  45153301 ctgtctacaaagttttctgtacataggtgccaatgagctaataactgcttaagtggttttataatgaacaaatgtgatcataacaagttg-ttttatcat 45153399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 45151177 - 45151309
Alignment:
Q  17 tatcacattggtatttatactactaggctatataactgattttgttaaacatctaacatggcttaactagctcttaagtgttaatagataactaagaact 116  Q
    |||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  45151177 tatcacataggtgtgtatactactaggctatataactgattttgttaaacatctaacagggcttaactagctcttaagtgttaacagataactgagaact 45151276  T
Q  117 aattcctattccttgtacataattttgactgat 149  Q
    |||||||||||||||||||||||||||||||||    
T  45151277 aattcctattccttgtacataattttgactgat 45151309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 348
Target Start/End: Complemental strand, 43848069 - 43848021
Alignment:
Q  300 agctatcagctatctgctatttttaccaaacagagccatacttttttat 348  Q
    |||||||||||||| |||||||||||||||||||||| |||| ||||||    
T  43848069 agctatcagctatccgctatttttaccaaacagagccttactattttat 43848021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 45140869 - 45140829
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  45140869 aagctatcagctatccgctatttttaccaaacagagccata 45140829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 297 - 336
Target Start/End: Complemental strand, 39319469 - 39319430
Alignment:
Q  297 ataagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  39319469 ataagctatcagctatccgctatttttaccaaacagagcc 39319430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 31497448 - 31497485
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  31497448 aagctatcagctatccgctatttttaccaaacagagcc 31497485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 11740513 - 11740473
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||||||| ||||||||||||||| |||||||||    
T  11740513 aagctatcagctatccgctatttttaccaaatagagccata 11740473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 32541975 - 32542011
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||| |||||||||||||||||||||||||    
T  32541975 tatcagctatccgctatttttaccaaacagagccata 32542011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 336
Target Start/End: Original strand, 7379882 - 7379921
Alignment:
Q  297 ataagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  7379882 ataagctatcagctatccgctatttttatcaaacagagcc 7379921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 332
Target Start/End: Original strand, 44264341 - 44264376
Alignment:
Q  297 ataagctatcagctatctgctatttttaccaaacag 332  Q
    ||||||||||||||||| ||||||||||||||||||    
T  44264341 ataagctatcagctatccgctatttttaccaaacag 44264376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 44826743 - 44826701
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccatacttttt 345  Q
    ||||||||||| |||||||||||||||||||||| || |||||    
T  44826743 tatcagctatccgctatttttaccaaacagagccctagttttt 44826701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 1893262 - 1893229
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  1893262 tatcagctatccgctatttttaccaaacagagcc 1893229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 8435845 - 8435812
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  8435845 tatcagctatccgctatttttaccaaacagagcc 8435812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 332
Target Start/End: Original strand, 9211773 - 9211822
Alignment:
Q  283 atcagtcattatcgataagctatcagctatctgctatttttaccaaacag 332  Q
    ||||||||| | | |||||||||||| |||| ||||||||||||||||||    
T  9211773 atcagtcatcagctataagctatcagttatccgctatttttaccaaacag 9211822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 17116299 - 17116332
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  17116299 tatcagctatccgctatttttaccaaacagagcc 17116332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 25024139 - 25024172
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  25024139 tatcagctatccgctatttttaccaaacagagcc 25024172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 31582507 - 31582540
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  31582507 tatcagctatccgctatttttaccaaacagagcc 31582540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 31687444 - 31687411
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  31687444 tatcagctatccgctatttttaccaaacagagcc 31687411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 41693405 - 41693372
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  41693405 tatcagctatccgctatttttaccaaacagagcc 41693372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 18346798 - 18346743
Alignment:
Q  283 atcagtcattatcgataagctatcagctatctgctatttttaccaaacagagccat 338  Q
    ||||||||| | | ||||||||||||||||| ||||||||||||||||||||||||    
T  18346798 atcagtcatcagctataagctatcagctatccgctatttttaccaaacagagccat 18346743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 2498642 - 2498682
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagccata 339  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  2498642 aagctatcagctatctgctatttttaccaaacagagtcata 2498682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 300 - 336
Target Start/End: Complemental strand, 28867891 - 28867855
Alignment:
Q  300 agctatcagctatctgctatttttaccaaacagagcc 336  Q
    |||||||||||||| ||||||||||||||||||||||    
T  28867891 agctatcagctatccgctatttttaccaaacagagcc 28867855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 300 - 336
Target Start/End: Complemental strand, 31149826 - 31149790
Alignment:
Q  300 agctatcagctatctgctatttttaccaaacagagcc 336  Q
    |||||||||||||| ||||||||||||||||||||||    
T  31149826 agctatcagctatccgctatttttaccaaacagagcc 31149790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 338
Target Start/End: Original strand, 15314031 - 15314066
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccat 338  Q
    ||||||||||| ||||||||||||||||||||||||    
T  15314031 tatcagctatccgctatttttaccaaacagagccat 15314066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 7710344 - 7710310
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcca 337  Q
    ||||||||||| |||||||||||||||||||||||    
T  7710344 tatcagctatccgctatttttaccaaacagagcca 7710310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 38966862 - 38966828
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcca 337  Q
    ||||||||||| |||||||||||||||||||||||    
T  38966862 tatcagctatccgctatttttaccaaacagagcca 38966828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 301 - 339
Target Start/End: Complemental strand, 52702405 - 52702367
Alignment:
Q  301 gctatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  52702405 gctataagctatcagctatttttaccaaacagagccata 52702367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 323626 - 323659
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  323626 tatcagctatccgctatttttaccaaacagagcc 323659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 1918834 - 1918867
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  1918834 tatcagctatccgctatttttaccaaacagagcc 1918867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 13120974 - 13120941
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  13120974 tatcagctatccgctatttttaccaaacagagcc 13120941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 19898275 - 19898242
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  19898275 tatcagctatccgctatttttaccaaacagagcc 19898242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 23710776 - 23710813
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  23710776 aagctatcagctatccgttatttttaccaaacagagcc 23710813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 26205085 - 26205118
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  26205085 tatcagctatccgctatttttaccaaacagagcc 26205118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 29379788 - 29379821
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  29379788 tatcagctatccgctatttttaccaaacagagcc 29379821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 29586944 - 29586977
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  29586944 tatcagctatccgctatttttaccaaacagagcc 29586977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 29683519 - 29683486
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  29683519 tatcagctatccgctatttttaccaaacagagcc 29683486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 29703560 - 29703527
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  29703560 tatcagctatccgctatttttaccaaacagagcc 29703527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 30780077 - 30780110
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  30780077 tatcagctatccgctatttttaccaaacagagcc 30780110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 32367743 - 32367710
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  32367743 tatcagctatccgctatttttaccaaacagagcc 32367710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 33561234 - 33561201
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  33561234 tatcagctatccgctatttttaccaaacagagcc 33561201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 34087672 - 34087713
Alignment:
Q  211 cattttacatttgtcagctagttgatccgcttattttaccaa 252  Q
    |||||||||||| |||||||||||| ||||| ||||||||||    
T  34087672 cattttacatttatcagctagttgaaccgctaattttaccaa 34087713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 36300458 - 36300425
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  36300458 tatcagctatccgctatttttaccaaacagagcc 36300425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 36838056 - 36838023
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  36838056 tatcagctatccgctatttttaccaaacagagcc 36838023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 281 - 338
Target Start/End: Original strand, 38596821 - 38596878
Alignment:
Q  281 tcatcagtcattatcgataagctatcagctatctgctatttttaccaaacagagccat 338  Q
    ||||||||||| | | ||||| |||||| |||| || |||||||||||||||||||||    
T  38596821 tcatcagtcatcagctataagttatcagttatccgcaatttttaccaaacagagccat 38596878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 39827350 - 39827383
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  39827350 tatcagctatccgctatttttaccaaacagagcc 39827383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 41150601 - 41150568
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  41150601 tatcagctatccgctatttttaccaaacagagcc 41150568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 42063645 - 42063612
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  42063645 tatcagctatccgctatttttaccaaacagagcc 42063612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 44910608 - 44910641
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  44910608 tatcagctatccgctatttttaccaaacagagcc 44910641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 46370465 - 46370502
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    |||||||||||||||  |||||||||||||||||||||    
T  46370465 aagctatcagctatccactatttttaccaaacagagcc 46370502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 49219826 - 49219789
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  49219826 aagctatcaactatccgctatttttaccaaacagagcc 49219789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 297 - 339
Target Start/End: Complemental strand, 27089071 - 27089029
Alignment:
Q  297 ataagctatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  27089071 ataagctatcagctatccgctatttttaccaaacagagccata 27089029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 297 - 339
Target Start/End: Original strand, 27189230 - 27189272
Alignment:
Q  297 ataagctatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  27189230 ataagctatcagctatccgctatttttaccaaacagagccata 27189272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 303 - 341
Target Start/End: Original strand, 43254945 - 43254983
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccatact 341  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  43254945 tatcagctatccgctatttttaccaaacagagccatact 43254983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 9488161 - 9488198
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  9488161 aagctatcagctatccgctatttttaccaaacagagcc 9488198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 19831487 - 19831450
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  19831487 aagctatcagctatccgctatttttaccaaacagagcc 19831450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 36436884 - 36436921
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  36436884 aagctatcagctatccgctatttttaccaaacagagcc 36436921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 21254036 - 21254000
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||| |||||||||||||||||||||||||    
T  21254036 tatcagctatccgctatttttaccaaacagagccata 21254000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 47584891 - 47584933
Alignment:
Q  210 tcattttacatttgtcagctagttgatccgcttattttaccaa 252  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||    
T  47584891 tcattttacatttatcagctagttgaaccgctgattttaccaa 47584933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 303 - 345
Target Start/End: Complemental strand, 48831454 - 48831412
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccatacttttt 345  Q
    ||||||||||| |||||||||||||||||||||| || |||||    
T  48831454 tatcagctatccgctatttttaccaaacagagccgtagttttt 48831412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 790642 - 790609
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  790642 tatcagctatccgctatttttaccaaacagagcc 790609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 21375373 - 21375410
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  21375373 aagctatcagctataagctatttttaccaaacagagcc 21375410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 21745138 - 21745171
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  21745138 tatcagctatccgctatttttaccaaacagagcc 21745171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 31512036 - 31512069
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||| ||||||||||||||||||||||||||||    
T  31512036 tatcaactatctgctatttttaccaaacagagcc 31512069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 33027609 - 33027646
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  33027609 aagctatcagctatccgttatttttaccaaacagagcc 33027646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 33203038 - 33203005
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  33203038 tatcagctatccgctatttttaccaaacagagcc 33203005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 36245777 - 36245744
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  36245777 tatcagctatccgctatttttaccaaacagagcc 36245744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 42375189 - 42375156
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  42375189 tatcagctatccgctatttttaccaaacagagcc 42375156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 42586782 - 42586749
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  42586782 tatcagctatccgctatttttaccaaacagagcc 42586749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 45686257 - 45686224
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  45686257 tatcagctatccgctatttttaccaaacagagcc 45686224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000009; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 7652307 - 7652346
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagccat 338  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  7652307 aagctatcagctatccgctatttttaccaaacagagccat 7652346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 23921758 - 23921808
Alignment:
Q  283 atcagtcattatcgataagctatcagctatctgctatttttaccaaacaga 333  Q
    ||||||||| | | ||||||||||||||||| |||||||||||||||||||    
T  23921758 atcagtcatcagctataagctatcagctatccgctatttttaccaaacaga 23921808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 9160063 - 9160030
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||||||||||||||||||||||    
T  9160063 tatcagctatctgctatttttaccaaacagagcc 9160030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 11663302 - 11663262
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagccata 339  Q
    |||||||| |||||||||||||||||| |||||||||||||    
T  11663302 aagctatcggctatctgctatttttacaaaacagagccata 11663262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 12714065 - 12714101
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||| |||||||||||||||||||||||||    
T  12714065 tatcagctatccgctatttttaccaaacagagccata 12714101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 12775293 - 12775329
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||| |||||||||||||||||||||||||    
T  12775293 tatcagctatccgctatttttaccaaacagagccata 12775329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 13156272 - 13156236
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||| |||||||||||||||||||||||||    
T  13156272 tatcagctatccgctatttttaccaaacagagccata 13156236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 339
Target Start/End: Complemental strand, 27868223 - 27868188
Alignment:
Q  304 atcagctatctgctatttttaccaaacagagccata 339  Q
    |||||||||| |||||||||||||||||||||||||    
T  27868223 atcagctatccgctatttttaccaaacagagccata 27868188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 338
Target Start/End: Original strand, 43403246 - 43403281
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccat 338  Q
    ||||||||||| ||||||||||||||||||||||||    
T  43403246 tatcagctatccgctatttttaccaaacagagccat 43403281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 5381219 - 5381185
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcca 337  Q
    ||||||||||| |||||||||||||||||||||||    
T  5381219 tatcagctatccgctatttttaccaaacagagcca 5381185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 6350208 - 6350250
Alignment:
Q  210 tcattttacatttgtcagctagttgatccgcttattttaccaa 252  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||    
T  6350208 tcattttacatttatcagctagttgaaccgctaattttaccaa 6350250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 6603297 - 6603263
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcca 337  Q
    ||||||||||| |||||||||||||||||||||||    
T  6603297 tatcagctatccgctatttttaccaaacagagcca 6603263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 19955693 - 19955659
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcca 337  Q
    ||||||||||| |||||||||||||||||||||||    
T  19955693 tatcagctatccgctatttttaccaaacagagcca 19955659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 22653371 - 22653413
Alignment:
Q  210 tcattttacatttgtcagctagttgatccgcttattttaccaa 252  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||    
T  22653371 tcattttacatttatcagctagttgaaccgctaattttaccaa 22653413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 303 - 337
Target Start/End: Original strand, 24801575 - 24801609
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcca 337  Q
    ||||||||||| |||||||||||||||||||||||    
T  24801575 tatcagctatccgctatttttaccaaacagagcca 24801609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 299 - 333
Target Start/End: Complemental strand, 32381050 - 32381016
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacaga 333  Q
    ||||||||||||||| |||||||||||||||||||    
T  32381050 aagctatcagctatccgctatttttaccaaacaga 32381016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 1710592 - 1710555
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  1710592 aagctatcaactatccgctatttttaccaaacagagcc 1710555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 2672185 - 2672218
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  2672185 tatcagctatccgctatttttaccaaacagagcc 2672218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 5997281 - 5997248
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  5997281 tatcagctatccgctatttttaccaaacagagcc 5997248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 8023319 - 8023286
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  8023319 tatcagctatccgctatttttaccaaacagagcc 8023286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 8285589 - 8285622
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  8285589 tatcagctatccgctatttttaccaaacagagcc 8285622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 11061853 - 11061820
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  11061853 tatcagctatccgctatttttaccaaacagagcc 11061820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 11099973 - 11099920
Alignment:
Q  283 atcagtcattatcgataagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||| | | ||||||||||||||||| ||||||||||| ||||| ||||    
T  11099973 atcagtcatcagctataagctatcagctatcagctatttttactaaacaaagcc 11099920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 13227936 - 13227903
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  13227936 tatcagctatccgctatttttaccaaacagagcc 13227903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 14646750 - 14646717
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  14646750 tatcagctatccgctatttttaccaaacagagcc 14646717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 15531215 - 15531248
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  15531215 tatcagctatccgctatttttaccaaacagagcc 15531248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 16856354 - 16856321
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  16856354 tatcagctatccgctatttttaccaaacagagcc 16856321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 19526508 - 19526541
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  19526508 tatcagctatccgctatttttaccaaacagagcc 19526541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 32383614 - 32383647
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  32383614 tatcagctatccgctatttttaccaaacagagcc 32383647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 35235114 - 35235081
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  35235114 tatcagctatccgctatttttaccaaacagagcc 35235081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 35235928 - 35235895
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  35235928 tatcagctatccgctatttttaccaaacagagcc 35235895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 36686602 - 36686635
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  36686602 tatcagctatccgctatttttaccaaacagagcc 36686635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 39276182 - 39276215
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  39276182 tatcagctatccgctatttttaccaaacagagcc 39276215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000009; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 297 - 336
Target Start/End: Complemental strand, 2265526 - 2265487
Alignment:
Q  297 ataagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  2265526 ataagctatcagctatccgctatttttaccaaacagagcc 2265487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 297 - 336
Target Start/End: Complemental strand, 9263706 - 9263667
Alignment:
Q  297 ataagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  9263706 ataagctatcagctatccgctatttttaccaaacagagcc 9263667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 297 - 336
Target Start/End: Original strand, 16487642 - 16487681
Alignment:
Q  297 ataagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  16487642 ataagctatcagctatccgctatttttaccaaacagagcc 16487681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 3378132 - 3378169
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  3378132 aagctatcagctatccgctatttttaccaaacagagcc 3378169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 8340549 - 8340586
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  8340549 aagctatcagctatccgctatttttaccaaacagagcc 8340586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 17263157 - 17263120
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  17263157 aagctatcagctatccgctatttttaccaaacagagcc 17263120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 41796104 - 41796071
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||||||||||||||||||||||    
T  41796104 tatcagctatctgctatttttaccaaacagagcc 41796071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 44276532 - 44276569
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  44276532 aagctatcagctatccgctatttttaccaaacagagcc 44276569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 7399651 - 7399615
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||| |||||||||||||||||||||||||    
T  7399651 tatcagctatccgctatttttaccaaacagagccata 7399615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 39675994 - 39676034
Alignment:
Q  297 ataagctatcagctatctgctatttttaccaaacagagcca 337  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  39675994 ataagctatcagctatccgctatttttaccaaatagagcca 39676034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 336
Target Start/End: Complemental strand, 40868732 - 40868693
Alignment:
Q  297 ataagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  40868732 ataagctatcagctatccgctatttttatcaaacagagcc 40868693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 2759515 - 2759557
Alignment:
Q  210 tcattttacatttgtcagctagttgatccgcttattttaccaa 252  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||    
T  2759515 tcattttacatttatcagctagttgaaccgctaattttaccaa 2759557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 13527300 - 13527266
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcca 337  Q
    ||||||||||| |||||||||||||||||||||||    
T  13527300 tatcagctatccgctatttttaccaaacagagcca 13527266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 36711871 - 36711837
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcca 337  Q
    ||||||||||| |||||||||||||||||||||||    
T  36711871 tatcagctatccgctatttttaccaaacagagcca 36711837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 38843483 - 38843525
Alignment:
Q  210 tcattttacatttgtcagctagttgatccgcttattttaccaa 252  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||    
T  38843483 tcattttacatttatcagctagttgaaccgctaattttaccaa 38843525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 2545785 - 2545752
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  2545785 tatcagctatccgctatttttaccaaacagagcc 2545752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 4452888 - 4452855
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  4452888 tatcagctatccgctatttttaccaaacagagcc 4452855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 5040546 - 5040579
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  5040546 tatcagctatccgctatttttaccaaacagagcc 5040579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 8687760 - 8687727
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  8687760 tatcagctatccgctatttttaccaaacagagcc 8687727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 8705870 - 8705837
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  8705870 tatcagctatccgctatttttaccaaacagagcc 8705837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 9887745 - 9887778
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  9887745 tatcagctatccgctatttttaccaaacagagcc 9887778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 15569956 - 15569989
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  15569956 tatcagctatccgctatttttaccaaacagagcc 15569989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 18212851 - 18212888
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  18212851 aagctatcagctatcagttatttttaccaaacagagcc 18212888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 21866022 - 21866055
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  21866022 tatcagctatccgctatttttaccaaacagagcc 21866055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 24401481 - 24401448
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  24401481 tatcagctatccgctatttttaccaaacagagcc 24401448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 28382012 - 28381979
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  28382012 tatcagctatccgctatttttaccaaacagagcc 28381979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 38578412 - 38578371
Alignment:
Q  299 aagctatcagctatctgctattttt-accaaacagagccata 339  Q
    ||||||||||||||| ||||||||| ||||||||||||||||    
T  38578412 aagctatcagctatccgctattttttaccaaacagagccata 38578371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 41323564 - 41323597
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  41323564 tatcagctatccgctatttttaccaaacagagcc 41323597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 43136413 - 43136446
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  43136413 tatcagctatccgctatttttaccaaacagagcc 43136446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 85059 - 85109
Alignment:
Q  283 atcagtcattatcgataagctatcagctatctgctatttttaccaaacaga 333  Q
    ||||||||| | | ||||||||||||||||| |||||||||||||||||||    
T  85059 atcagtcatcagctataagctatcagctatccgctatttttaccaaacaga 85109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 92876 - 92843
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  92876 tatcagctatccgctatttttaccaaacagagcc 92843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1526 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1526
Description:

Target: scaffold1526; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 1401 - 1364
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  1401 aagctatcagctatccgctatttttaccaaacagagcc 1364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.000000001; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 3010448 - 3010485
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  3010448 aagctatcagctatccgctatttttaccaaacagagcc 3010485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 16398447 - 16398484
Alignment:
Q  297 ataagctatcagctatctgctatttttaccaaacagag 334  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  16398447 ataagctatcagctatccgctatttttaccaaacagag 16398484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 23867286 - 23867249
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  23867286 aagctatcagctatccgctatttttaccaaacagagcc 23867249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 37114670 - 37114637
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||||||||||||||||||||||    
T  37114670 tatcagctatctgctatttttaccaaacagagcc 37114637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 47416919 - 47416882
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  47416919 aagctatcagctatccgctatttttaccaaacagagcc 47416882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 4938729 - 4938693
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||| |||||||||||||||||||||||||    
T  4938729 tatcagctatccgctatttttaccaaacagagccata 4938693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 18583603 - 18583639
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||| |||||||||||||||||||||||||    
T  18583603 tatcagctatccgctatttttaccaaacagagccata 18583639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 25439888 - 25439852
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||| |||||||||||||||||||||||||    
T  25439888 tatcagctatccgctatttttaccaaacagagccata 25439852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 33004454 - 33004418
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||| |||||||||||||||||||||||||    
T  33004454 tatcagctatccgctatttttaccaaacagagccata 33004418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 338
Target Start/End: Original strand, 11601450 - 11601485
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccat 338  Q
    ||||||||||| ||||||||||||||||||||||||    
T  11601450 tatcagctatccgctatttttaccaaacagagccat 11601485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 281 - 336
Target Start/End: Original strand, 40120645 - 40120700
Alignment:
Q  281 tcatcagtcattatcgataagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| | | ||||||||||| ||||| | ||||||||||||||||||||    
T  40120645 tcatcagtcatcagctataagctatcaactatccgttatttttaccaaacagagcc 40120700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 338
Target Start/End: Original strand, 45906912 - 45906947
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccat 338  Q
    ||||||||||| ||||||||||||||||||||||||    
T  45906912 tatcagctatccgctatttttaccaaacagagccat 45906947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 328
Target Start/End: Complemental strand, 56544981 - 56544950
Alignment:
Q  297 ataagctatcagctatctgctatttttaccaa 328  Q
    ||||||||||||||||||||||||||||||||    
T  56544981 ataagctatcagctatctgctatttttaccaa 56544950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 4390950 - 4390908
Alignment:
Q  210 tcattttacatttgtcagctagttgatccgcttattttaccaa 252  Q
    ||||||||||||| |||||||||||| | ||||||||||||||    
T  4390950 tcattttacatttatcagctagttgaacagcttattttaccaa 4390908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 27397133 - 27397099
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcca 337  Q
    ||||||||||| |||||||||||||||||||||||    
T  27397133 tatcagctatccgctatttttaccaaacagagcca 27397099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 303 - 337
Target Start/End: Original strand, 29414276 - 29414310
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcca 337  Q
    ||||||||||| |||||||||||||||||||||||    
T  29414276 tatcagctatccgctatttttaccaaacagagcca 29414310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 299 - 333
Target Start/End: Complemental strand, 35821663 - 35821629
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacaga 333  Q
    ||||||||||||||| |||||||||||||||||||    
T  35821663 aagctatcagctatccgctatttttaccaaacaga 35821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 55685615 - 55685657
Alignment:
Q  210 tcattttacatttgtcagctagttgatccgcttattttaccaa 252  Q
    ||||||||||||| ||||||||||||  |||||||||||||||    
T  55685615 tcattttacatttatcagctagttgaatcgcttattttaccaa 55685657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 4392101 - 4392068
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  4392101 tatcagctatccgctatttttaccaaacagagcc 4392068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 7707151 - 7707184
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  7707151 tatcagctatccgctatttttaccaaacagagcc 7707184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 8942653 - 8942686
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  8942653 tatcagctatccgctatttttaccaaacagagcc 8942686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 11151299 - 11151266
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  11151299 tatcagctatccgctatttttaccaaacagagcc 11151266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 21370579 - 21370612
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  21370579 tatcagctatccgctatttttaccaaacagagcc 21370612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 22037728 - 22037695
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  22037728 tatcagctatccgctatttttaccaaacagagcc 22037695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 27185003 - 27184970
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  27185003 tatcagctatccgctatttttaccaaacagagcc 27184970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 31679629 - 31679662
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  31679629 tatcagctatccgctatttttaccaaacagagcc 31679662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 42117618 - 42117651
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  42117618 tatcagctatccgctatttttaccaaacagagcc 42117651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 43225096 - 43225063
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  43225096 tatcagctatccgctatttttaccaaacagagcc 43225063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 53407933 - 53407966
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  53407933 tatcagctatccgctatttttaccaaacagagcc 53407966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 56373222 - 56373255
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  56373222 tatcagctatccgctatttttaccaaacagagcc 56373255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.000000001; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 37713353 - 37713316
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  37713353 aagctatcagctatccgctatttttaccaaacagagcc 37713316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 16126560 - 16126520
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  16126560 aagctatcagctatccgctatttttacgaaacagagccata 16126520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Complemental strand, 44748241 - 44748201
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||||||| |||||||||| ||||||||||||||    
T  44748241 aagctatcagctatccgctatttttatcaaacagagccata 44748201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 303 - 335
Target Start/End: Complemental strand, 50316536 - 50316504
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagc 335  Q
    |||||||||||||||||||||||||||||||||    
T  50316536 tatcagctatctgctatttttaccaaacagagc 50316504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 299 - 338
Target Start/End: Original strand, 30549292 - 30549331
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagccat 338  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  30549292 aagctatcagctatccgctatttttaccaaacaaagccat 30549331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 336
Target Start/End: Complemental strand, 54541427 - 54541388
Alignment:
Q  297 ataagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  54541427 ataagctatcagctatccgttatttttaccaaacagagcc 54541388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 20451120 - 20451162
Alignment:
Q  210 tcattttacatttgtcagctagttgatccgcttattttaccaa 252  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||    
T  20451120 tcattttacatttatcagctagttgaaccgctaattttaccaa 20451162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 299 - 337
Target Start/End: Original strand, 52795669 - 52795707
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcca 337  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  52795669 aagctatcatctatccgctatttttaccaaacagagcca 52795707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 2579374 - 2579341
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  2579374 tatcagctatccgctatttttaccaaacagagcc 2579341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 2852678 - 2852711
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  2852678 tatcagctatccgctatttttaccaaacagagcc 2852711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 29080652 - 29080619
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  29080652 tatcagctatccgctatttttaccaaacagagcc 29080619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 29717599 - 29717566
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  29717599 tatcagctatccgctatttttaccaaacagagcc 29717566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 33392466 - 33392499
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  33392466 tatcagctatccgctatttttaccaaacagagcc 33392499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 37089042 - 37089075
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  37089042 tatcagctatccgctatttttaccaaacagagcc 37089075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 37528118 - 37528085
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  37528118 tatcagctatccgctatttttaccaaacagagcc 37528085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 38186544 - 38186577
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  38186544 tatcagctatccgctatttttaccaaacagagcc 38186577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 38891400 - 38891367
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  38891400 tatcagctatccgctatttttaccaaacagagcc 38891367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 39470619 - 39470656
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  39470619 aagctatcatctatccgctatttttaccaaacagagcc 39470656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 40479439 - 40479406
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  40479439 tatcagctatccgctatttttaccaaacagagcc 40479406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 40562710 - 40562677
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  40562710 tatcagctatccgctatttttaccaaacagagcc 40562677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 42218398 - 42218435
Alignment:
Q  297 ataagctatcagctatctgctatttttaccaaacagag 334  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  42218398 ataagctatcagctatccgctgtttttaccaaacagag 42218435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 45344414 - 45344381
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  45344414 tatcagctatccgctatttttaccaaacagagcc 45344381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 336
Target Start/End: Complemental strand, 49852653 - 49852616
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  49852653 aagctatcagctatccgctatttttaccaaacggagcc 49852616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 50500554 - 50500591
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  50500554 aagctatcagctatccgctattttaaccaaacagagcc 50500591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 52858677 - 52858710
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  52858677 tatcagctatccgctatttttaccaaacagagcc 52858710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 52867627 - 52867586
Alignment:
Q  211 cattttacatttgtcagctagttgatccgcttattttaccaa 252  Q
    |||||||||||| |||||||||||| ||||| ||||||||||    
T  52867627 cattttacatttatcagctagttgaaccgctaattttaccaa 52867586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 54671603 - 54671570
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  54671603 tatcagctatccgctatttttaccaaacagagcc 54671570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 55227159 - 55227126
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  55227159 tatcagctatccgctatttttaccaaacagagcc 55227126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 129536 - 129500
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||| |||||||||||||||||||||||||    
T  129536 tatcagctatccgctatttttaccaaacagagccata 129500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 41096 - 41060
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||| |||||||||||||||||||||||||    
T  41096 tatcagctatccgctatttttaccaaacagagccata 41060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000005; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 303 - 339
Target Start/End: Complemental strand, 6709080 - 6709044
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccata 339  Q
    ||||||||||| |||||||||||||||||||||||||    
T  6709080 tatcagctatccgctatttttaccaaacagagccata 6709044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 299 - 334
Target Start/End: Complemental strand, 30810580 - 30810545
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagag 334  Q
    ||||||||||||||| ||||||||||||||||||||    
T  30810580 aagctatcagctatccgctatttttaccaaacagag 30810545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 11016305 - 11016347
Alignment:
Q  210 tcattttacatttgtcagctagttgatccgcttattttaccaa 252  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||    
T  11016305 tcattttacatttatcagctagttgaaccgctaattttaccaa 11016347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 28077140 - 28077182
Alignment:
Q  210 tcattttacatttgtcagctagttgatccgcttattttaccaa 252  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||    
T  28077140 tcattttacatttatcagctagttgaaccgctaattttaccaa 28077182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 34232255 - 34232221
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcca 337  Q
    ||||||||||| |||||||||||||||||||||||    
T  34232255 tatcagctatccgctatttttaccaaacagagcca 34232221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 559094 - 559127
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  559094 tatcagctatccgctatttttaccaaacagagcc 559127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 1805754 - 1805721
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  1805754 tatcagctatccgctatttttaccaaacagagcc 1805721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 2443207 - 2443240
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  2443207 tatcagctatccgctatttttaccaaacagagcc 2443240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 336
Target Start/End: Original strand, 10856871 - 10856908
Alignment:
Q  299 aagctatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  10856871 aagctatcagctatccgctatttttaccaaacaaagcc 10856908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 12432058 - 12432025
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  12432058 tatcagctatccgctatttttaccaaacagagcc 12432025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 27719975 - 27719942
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  27719975 tatcagctatccgctatttttaccaaacagagcc 27719942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 28721148 - 28721115
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  28721148 tatcagctatccgctatttttaccaaacagagcc 28721115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 32732566 - 32732599
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  32732566 tatcagctatccgctatttttaccaaacagagcc 32732599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 34684405 - 34684372
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  34684405 tatcagctatccgctatttttaccaaacagagcc 34684372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 303 - 342
Target Start/End: Complemental strand, 28397 - 28358
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagccatactt 342  Q
    ||||||||||| |||||||||||||||||||||| |||||    
T  28397 tatcagctatccgctatttttaccaaacagagccttactt 28358  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 303 - 337
Target Start/End: Complemental strand, 11816 - 11782
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcca 337  Q
    ||||||||||| |||||||||||||||||||||||    
T  11816 tatcagctatccgctatttttaccaaacagagcca 11782  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 192728 - 192770
Alignment:
Q  210 tcattttacatttgtcagctagttgatccgcttattttaccaa 252  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||    
T  192728 tcattttacatttatcagctagttgaaccgctaattttaccaa 192770  T

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Target: scaffold0362 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 6182 - 6215
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  6182 tatcagctatccgctatttttaccaaacagagcc 6215  T

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Target: scaffold0349 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 9397 - 9364
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  9397 tatcagctatccgctatttttaccaaacagagcc 9364  T

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Target: scaffold0246 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 7810 - 7843
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  7810 tatcagctatccgctatttttaccaaacagagcc 7843  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 25677 - 25710
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  25677 tatcagctatccgctatttttaccaaacagagcc 25710  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 432033 - 432066
Alignment:
Q  303 tatcagctatctgctatttttaccaaacagagcc 336  Q
    ||||||||||| ||||||||||||||||||||||    
T  432033 tatcagctatccgctatttttaccaaacagagcc 432066  T

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