View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14740_low_4 (Length: 478)

Name: NF14740_low_4
Description: NF14740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14740_low_4
NF14740_low_4
[»] chr6 (35 HSPs)
chr6 (167-465)||(5000022-5000332)
chr6 (1-174)||(5000457-5000628)
chr6 (4-71)||(32978842-32978909)
chr6 (4-72)||(24645530-24645598)
chr6 (4-72)||(28152147-28152215)
chr6 (4-72)||(10339056-10339124)
chr6 (4-72)||(16766757-16766825)
chr6 (4-72)||(4877992-4878059)
chr6 (4-72)||(18367896-18367964)
chr6 (4-72)||(34595183-34595251)
chr6 (15-65)||(3398683-3398733)
chr6 (6-72)||(13360315-13360380)
chr6 (4-72)||(7248418-7248486)
chr6 (4-72)||(28715344-28715412)
chr6 (4-77)||(7265530-7265603)
chr6 (4-61)||(8714040-8714097)
chr6 (15-72)||(8776910-8776967)
chr6 (15-72)||(31384990-31385047)
chr6 (4-60)||(5970051-5970107)
chr6 (4-72)||(6898223-6898291)
chr6 (4-72)||(13364647-13364715)
chr6 (4-72)||(17435259-17435327)
chr6 (26-72)||(9027238-9027284)
chr6 (3-61)||(23771626-23771684)
chr6 (26-72)||(31959221-31959267)
chr6 (26-71)||(8389411-8389456)
chr6 (26-71)||(9025448-9025493)
chr6 (4-72)||(9658928-9658997)
chr6 (19-72)||(12236723-12236776)
chr6 (8-61)||(24831861-24831914)
chr6 (4-72)||(7378028-7378096)
chr6 (26-78)||(7625187-7625239)
chr6 (4-72)||(7977772-7977840)
chr6 (4-72)||(9107301-9107369)
chr6 (4-72)||(16488521-16488589)
[»] chr2 (23 HSPs)
chr2 (4-73)||(2438660-2438729)
chr2 (4-72)||(18840955-18841023)
chr2 (4-72)||(15972922-15972990)
chr2 (4-72)||(37419803-37419871)
chr2 (1-72)||(27286223-27286294)
chr2 (4-72)||(4207916-4207984)
chr2 (8-72)||(21782746-21782810)
chr2 (8-72)||(38117101-38117165)
chr2 (1-72)||(11223795-11223865)
chr2 (13-72)||(15907853-15907912)
chr2 (26-72)||(15909572-15909618)
chr2 (9-72)||(35449561-35449626)
chr2 (4-73)||(19942314-19942383)
chr2 (4-52)||(5367241-5367289)
chr2 (1-61)||(27084315-27084375)
chr2 (4-72)||(37559026-37559094)
chr2 (4-71)||(21091772-21091839)
chr2 (26-72)||(10535687-10535733)
chr2 (10-72)||(19959881-19959943)
chr2 (4-72)||(37497169-37497238)
chr2 (4-72)||(20242669-20242737)
chr2 (4-72)||(30404792-30404860)
chr2 (16-72)||(34993924-34993980)
[»] chr4 (48 HSPs)
chr4 (4-72)||(30982809-30982877)
chr4 (4-72)||(23292928-23292996)
chr4 (1-72)||(24613632-24613703)
chr4 (15-78)||(29205528-29205591)
chr4 (9-72)||(36635384-36635447)
chr4 (4-70)||(12797282-12797348)
chr4 (16-72)||(715547-715603)
chr4 (16-72)||(752873-752929)
chr4 (4-72)||(12895216-12895284)
chr4 (4-72)||(22234821-22234889)
chr4 (4-72)||(34306746-34306814)
chr4 (9-72)||(14465007-14465070)
chr4 (1-72)||(47264043-47264114)
chr4 (15-72)||(19482739-19482796)
chr4 (4-72)||(23861371-23861439)
chr4 (4-72)||(28964190-28964258)
chr4 (4-72)||(35157927-35157995)
chr4 (9-72)||(3947703-3947766)
chr4 (4-70)||(20743210-20743277)
chr4 (4-74)||(4157198-4157268)
chr4 (4-74)||(4157485-4157555)
chr4 (3-72)||(8423660-8423729)
chr4 (4-61)||(21945552-21945609)
chr4 (15-72)||(35161096-35161153)
chr4 (27-72)||(37203324-37203369)
chr4 (26-71)||(46715416-46715461)
chr4 (4-61)||(49431075-49431132)
chr4 (16-72)||(3064870-3064926)
chr4 (4-72)||(16073443-16073511)
chr4 (4-44)||(29205493-29205533)
chr4 (16-72)||(44081509-44081565)
chr4 (17-72)||(7214468-7214523)
chr4 (20-67)||(21873309-21873356)
chr4 (20-67)||(21929170-21929217)
chr4 (6-61)||(30522858-30522913)
chr4 (26-68)||(30094084-30094126)
chr4 (20-77)||(482180-482237)
chr4 (3-72)||(21345475-21345544)
chr4 (4-72)||(24343561-24343630)
chr4 (4-61)||(30103310-30103367)
chr4 (35-72)||(30299009-30299046)
chr4 (35-72)||(30327877-30327914)
chr4 (16-49)||(36409469-36409502)
chr4 (16-49)||(36423635-36423668)
chr4 (5-54)||(40179596-40179645)
chr4 (4-72)||(53381532-53381601)
chr4 (20-72)||(12884349-12884401)
chr4 (4-72)||(19312395-19312463)
[»] chr1 (39 HSPs)
chr1 (4-72)||(9828104-9828172)
chr1 (5-69)||(5898211-5898275)
chr1 (4-72)||(22515829-22515897)
chr1 (4-72)||(40258875-40258943)
chr1 (4-72)||(47989557-47989625)
chr1 (4-58)||(43492450-43492504)
chr1 (15-72)||(5944354-5944411)
chr1 (4-60)||(1815306-1815362)
chr1 (4-72)||(38078603-38078671)
chr1 (4-72)||(40917809-40917877)
chr1 (9-72)||(1486646-1486709)
chr1 (4-74)||(29163321-29163391)
chr1 (15-72)||(6427535-6427592)
chr1 (4-73)||(42359390-42359459)
chr1 (6-51)||(52284764-52284809)
chr1 (20-72)||(9690215-9690267)
chr1 (4-72)||(46348325-46348393)
chr1 (4-72)||(51410074-51410142)
chr1 (4-47)||(9629856-9629899)
chr1 (30-72)||(22881569-22881611)
chr1 (4-72)||(25361946-25362010)
chr1 (26-72)||(29144322-29144368)
chr1 (26-72)||(46940750-46940796)
chr1 (19-72)||(17778617-17778670)
chr1 (4-61)||(18190061-18190118)
chr1 (7-72)||(18556387-18556452)
chr1 (8-72)||(34741899-34741963)
chr1 (8-72)||(16297223-16297287)
chr1 (8-72)||(33202956-33203020)
chr1 (26-72)||(15765829-15765875)
chr1 (6-60)||(40181922-40181976)
chr1 (26-72)||(52903317-52903363)
chr1 (3-52)||(2896083-2896132)
chr1 (15-72)||(12919005-12919062)
chr1 (4-77)||(19637817-19637890)
chr1 (3-72)||(27965942-27966011)
chr1 (21-61)||(16164257-16164297)
chr1 (4-44)||(21530738-21530778)
chr1 (9-69)||(26830641-26830701)
[»] chr8 (34 HSPs)
chr8 (4-72)||(22652036-22652104)
chr8 (4-54)||(44462155-44462205)
chr8 (4-54)||(44469688-44469738)
chr8 (4-72)||(29447504-29447572)
chr8 (9-72)||(8343381-8343444)
chr8 (4-72)||(29510235-29510303)
chr8 (4-70)||(5813641-5813707)
chr8 (18-72)||(11803333-11803387)
chr8 (6-52)||(31557047-31557093)
chr8 (4-68)||(33405330-33405394)
chr8 (6-69)||(12570443-12570506)
chr8 (6-69)||(12570669-12570732)
chr8 (1-72)||(29447041-29447112)
chr8 (26-72)||(8343038-8343084)
chr8 (10-72)||(11944731-11944793)
chr8 (15-61)||(22943302-22943348)
chr8 (4-73)||(926729-926798)
chr8 (3-72)||(14134747-14134816)
chr8 (4-73)||(20679336-20679405)
chr8 (4-72)||(3951478-3951546)
chr8 (10-70)||(4122182-4122242)
chr8 (16-72)||(12402617-12402673)
chr8 (8-72)||(15816060-15816124)
chr8 (8-72)||(36450696-36450760)
chr8 (5-68)||(38079049-38079112)
chr8 (4-66)||(126295-126357)
chr8 (10-72)||(6065588-6065650)
chr8 (26-68)||(40064033-40064075)
chr8 (4-72)||(17751704-17751773)
chr8 (4-72)||(17760691-17760760)
chr8 (15-72)||(18407779-18407836)
chr8 (4-72)||(949207-949275)
chr8 (4-72)||(24413501-24413569)
chr8 (26-74)||(44067598-44067646)
[»] chr7 (36 HSPs)
chr7 (4-72)||(598257-598325)
chr7 (9-72)||(43027406-43027469)
chr7 (4-72)||(15680858-15680926)
chr7 (4-72)||(21880201-21880269)
chr7 (4-72)||(33994261-33994329)
chr7 (9-72)||(5409773-5409836)
chr7 (4-72)||(21864857-21864925)
chr7 (4-72)||(24339702-24339770)
chr7 (9-72)||(32093956-32094020)
chr7 (4-72)||(32308180-32308248)
chr7 (1-72)||(21831832-21831903)
chr7 (9-69)||(13770750-13770810)
chr7 (4-72)||(22484074-22484142)
chr7 (4-72)||(32287405-32287473)
chr7 (9-72)||(1433513-1433576)
chr7 (9-72)||(2334314-2334377)
chr7 (1-72)||(7438763-7438834)
chr7 (3-50)||(7973087-7973134)
chr7 (9-72)||(9778559-9778622)
chr7 (4-75)||(26033389-26033460)
chr7 (18-52)||(10043007-10043041)
chr7 (20-70)||(40287306-40287356)
chr7 (3-72)||(3554448-3554517)
chr7 (7-52)||(8234198-8234243)
chr7 (16-72)||(20545186-20545242)
chr7 (4-72)||(20549840-20549908)
chr7 (18-61)||(3294257-3294300)
chr7 (6-73)||(9408264-9408331)
chr7 (1-72)||(11665371-11665442)
chr7 (9-71)||(2533761-2533823)
chr7 (26-72)||(6490787-6490833)
chr7 (26-72)||(10359670-10359716)
chr7 (26-72)||(24105749-24105795)
chr7 (26-72)||(40131941-40131987)
chr7 (4-40)||(7197271-7197307)
chr7 (20-72)||(18035807-18035858)
[»] chr3 (34 HSPs)
chr3 (4-72)||(40993277-40993345)
chr3 (4-72)||(20503514-20503582)
chr3 (4-72)||(55401124-55401192)
chr3 (3-74)||(29508498-29508569)
chr3 (4-73)||(4987221-4987290)
chr3 (9-72)||(27505305-27505368)
chr3 (26-72)||(40052383-40052429)
chr3 (4-72)||(8039766-8039834)
chr3 (8-72)||(15796225-15796289)
chr3 (26-74)||(25775578-25775626)
chr3 (4-72)||(8789490-8789560)
chr3 (9-67)||(3631738-3631796)
chr3 (3-77)||(8842377-8842451)
chr3 (4-70)||(25093551-25093617)
chr3 (6-72)||(26492147-26492213)
chr3 (26-72)||(34185054-34185100)
chr3 (8-61)||(28812579-28812632)
chr3 (31-72)||(34910393-34910434)
chr3 (15-72)||(49651718-49651775)
chr3 (7-55)||(2620003-2620051)
chr3 (9-72)||(5440969-5441033)
chr3 (4-72)||(11252025-11252093)
chr3 (16-72)||(15999952-16000008)
chr3 (8-72)||(17005550-17005614)
chr3 (8-68)||(25064971-25065031)
chr3 (26-61)||(21720843-21720878)
chr3 (4-43)||(45451602-45451641)
chr3 (4-50)||(14832159-14832205)
chr3 (26-72)||(25074866-25074912)
chr3 (8-61)||(7171554-7171607)
chr3 (3-72)||(18426997-18427066)
chr3 (26-75)||(24204980-24205029)
chr3 (20-72)||(8101894-8101946)
chr3 (3-43)||(14338454-14338494)
[»] scaffold0050 (1 HSPs)
scaffold0050 (4-71)||(70327-70394)
[»] chr5 (27 HSPs)
chr5 (4-61)||(15382534-15382591)
chr5 (4-73)||(21190997-21191066)
chr5 (4-72)||(7677765-7677833)
chr5 (4-72)||(21522810-21522878)
chr5 (4-72)||(21533376-21533444)
chr5 (4-72)||(30502330-30502398)
chr5 (4-72)||(30542673-30542741)
chr5 (3-72)||(17123096-17123164)
chr5 (4-72)||(28588616-28588684)
chr5 (4-74)||(19579761-19579831)
chr5 (15-69)||(21194068-21194122)
chr5 (26-72)||(21351852-21351898)
chr5 (15-72)||(16304368-16304425)
chr5 (9-74)||(43001859-43001924)
chr5 (4-73)||(18421778-18421851)
chr5 (4-44)||(21542090-21542130)
chr5 (4-72)||(32766874-32766942)
chr5 (4-72)||(42893409-42893477)
chr5 (21-72)||(14873588-14873639)
chr5 (26-69)||(15410382-15410425)
chr5 (26-72)||(2436982-2437028)
chr5 (26-72)||(19820330-19820376)
chr5 (4-70)||(30098982-30099048)
chr5 (22-72)||(38464315-38464365)
chr5 (4-72)||(3966563-3966631)
chr5 (26-66)||(17088362-17088402)
chr5 (4-72)||(21814321-21814389)
[»] scaffold0793 (1 HSPs)
scaffold0793 (16-72)||(4823-4879)
[»] scaffold0652 (1 HSPs)
scaffold0652 (4-72)||(404-472)
[»] scaffold0036 (1 HSPs)
scaffold0036 (8-72)||(9678-9742)
[»] scaffold0019 (1 HSPs)
scaffold0019 (4-72)||(71785-71853)
[»] scaffold0004 (1 HSPs)
scaffold0004 (8-72)||(92875-92939)
[»] scaffold0003 (1 HSPs)
scaffold0003 (8-72)||(241658-241722)
[»] scaffold0136 (1 HSPs)
scaffold0136 (8-72)||(3780-3844)
[»] scaffold0086 (1 HSPs)
scaffold0086 (4-68)||(2988-3052)
[»] scaffold0053 (1 HSPs)
scaffold0053 (4-72)||(8847-8915)
[»] scaffold0361 (1 HSPs)
scaffold0361 (8-72)||(14580-14644)
[»] scaffold0044 (1 HSPs)
scaffold0044 (4-52)||(53240-53288)
[»] scaffold0008 (1 HSPs)
scaffold0008 (4-72)||(263303-263371)
[»] scaffold0011 (1 HSPs)
scaffold0011 (4-77)||(17539-17612)
[»] scaffold0697 (1 HSPs)
scaffold0697 (4-44)||(1693-1733)


Alignment Details
Target: chr6 (Bit Score: 232; Significance: 1e-128; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 167 - 465
Target Start/End: Complemental strand, 5000332 - 5000022
Alignment:
Q  167 cagtgaaagagtacacttatgactcaataaatggtccacaaattcataacagaagcatcttgctcaaagctcagtagctcaccatgactcattgctctca 266  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5000332 cagtgaaagagtacaattatgactcaataaatggtccacaaattcataacagaagcatcttgctcaaagctcagtagctcaccatgactcattgctctca 5000233  T
Q  267 cctttctcaatatagccaaaatagtgcagaagcagcagcagtactgtctatagactatagcc-----------nnnnnnngaaacattgtgataatagta 355  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                   |||||||||||||||||||    
T  5000232 cctttctcaatatagccaaaatagtgcagaagcagcagcagtactgtctatagactatagccttttttttcttttttttttaaacattgtgataatagta 5000133  T
Q  356 tcttgaaacattgtgacatagtccttgaatgga-aaaaattataaaaacatgcatagatgcatcttttcttagtcaatttgggtcatcaagtaggtcttg 454  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5000132 tcttgaaacattttgacatagtccttgaatggataaaaattataaaaacatgcatagatgcatcttttcttagtcaatttgggtcatcaagtaggtcttg 5000033  T
Q  455 tatgtcttttc 465  Q
    |||||||||||    
T  5000032 tatgtcttttc 5000022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 5000628 - 5000457
Alignment:
Q  1 tcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattgataaagtgagagnnnnnnnnnngatt 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||          ||||    
T  5000628 tcatgtcggtgtcagacacgacacatatccgacaccaggacacgtctaatccgaagagtgttcgtgcttcattgatgaagtgggaggaaaaaaa--gatt 5000531  T
Q  101 attctttgtcatgtaactgttggagaagcacagtgtccatcagagagtgatagacacacagagggacagtgaaa 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5000530 attctttgtcatgtaactgttggagaagcacagtgtccatcagagagtgatagacacacagagggacagagaaa 5000457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 32978909 - 32978842
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttca 71  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| | |||||| |||||||||    
T  32978909 tgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 24645530 - 24645598
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||  |||||||||    
T  24645530 tgtcggtgtcagacacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcat 24645598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 28152147 - 28152215
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| ||||||||||||||||| | ||||||||| |||||||||||||||||    
T  28152147 tgtcggtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcat 28152215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 10339124 - 10339056
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||||||||||||||||||| |||||||| |||||| || |||||| ||||||||||    
T  10339124 tgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 10339056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 16766757 - 16766825
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||| |||| ||||||||||||||||||| |||||||||||| ||| ||||||||||    
T  16766757 tgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcat 16766825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 4877992 - 4878059
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||||||||||||| | ||||||| ||||||||| |||||| ||||||||||    
T  4877992 tgtcggtgtcggacacgacacatgtccgaca-caggacacgcctaatccgaggagtgtccgtgcttcat 4878059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 18367896 - 18367964
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||||||||||||| ||||| |||||||| || |||| | |||||| ||||||||||    
T  18367896 tgtcggtgtcagacacgacacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcat 18367964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 34595183 - 34595251
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| |||| |||||||||||||  ||||||||| |||||| ||||||||||    
T  34595183 tgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcat 34595251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 3398683 - 3398733
Alignment:
Q  15 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgt 65  Q
    |||||||||||||||||||||||| |||||||||||| || ||||||||||    
T  3398683 gacacgacacatgtccgacaccggaacacgtctaatcagaggagtgttcgt 3398733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 13360380 - 13360315
Alignment:
Q  6 tcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||| ||| ||||||||||| | |||||| |||||||||||||||| ||||||||||    
T  13360380 tcggtgtcagacacaaca-atgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcat 13360315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 7248418 - 7248486
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||  ||||| |||  ||||||||||||||||||||| ||||||| |||||| ||||||||||    
T  7248418 tgtcggtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcat 7248486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 28715344 - 28715412
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| ||| ||||||||||||||| ||||| |||  ||||| ||||||||||    
T  28715344 tgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcat 28715412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 7265603 - 7265530
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattgata 77  Q
    |||||||||| ||||| | |||||||||||||||| | | | ||||||||| ||| || |||||||||||||||    
T  7265603 tgtcggtgtcggacacaatacatgtccgacaccggaatatgcctaatccgaggagcgtccgtgcttcattgata 7265530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 8714040 - 8714097
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 61  Q
    |||||||||| |||||||||||| ||||||| ||||||||| | ||||||| ||||||    
T  8714040 tgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgt 8714097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 8776967 - 8776910
Alignment:
Q  15 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||||| |||||  ||||||||| |||||| ||||||||||    
T  8776967 gacacgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcat 8776910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 31384990 - 31385047
Alignment:
Q  15 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||| ||||||||||||| ||||||| | |||||| ||||||||||    
T  31384990 gacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcat 31385047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 5970107 - 5970051
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtg 60  Q
    |||||||||| |||||||||||| ||||||| ||||||||| | ||||||| |||||    
T  5970107 tgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtg 5970051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 6898291 - 6898223
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||  | ||||| ||||||  ||||| ||||||||| |||||||||||||||||    
T  6898291 tgtcggtgtcggacacgaagcgtgtccaacaccgaaacacgcctaatccgatgagtgttcgtgcttcat 6898223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 13364715 - 13364647
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||  ||||||| ||||||| |||||| ||||||||||| ||||| ||||||  |||||||||    
T  13364715 tgtcggtgttggacacgatacatgtctgacaccaggacacgtctattccgacgagtgtctgtgcttcat 13364647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 17435259 - 17435327
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| |||| |||||||||| ||| |||||| ||||||||||||||| ||| ||||| ||| ||||||    
T  17435259 tgtcgatgtcggacacgacacgtgttcgacactgggacacgtctaatctgaaaagtgtccgtacttcat 17435327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 9027238 - 9027284
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||| ||||||| | ||||||| |||||||||    
T  9027238 tgtccgacaccgggacacggctaatccaaggagtgtttgtgcttcat 9027284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 23771626 - 23771684
Alignment:
Q  3 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 61  Q
    ||||||||||| |||||||||  |||||||||| | ||||||||||| | |||||||||    
T  23771626 atgtcggtgtcggacacgacatgtgtccgacacagagacacgtctaacctgaagagtgt 23771684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 31959221 - 31959267
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||  ||||||||| |||||| ||||||||||    
T  31959221 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 31959267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 8389456 - 8389411
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttca 71  Q
    ||||||||||||||||||  ||||||||| |||||| |||||||||    
T  8389456 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 9025493 - 9025448
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttca 71  Q
    ||||||||||||||||||| |||||||||  ||||| |||||||||    
T  9025493 tgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 9658928 - 9658997
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaa-tccgaagagtgttcgtgcttcat 72  Q
    ||||||||| ||||||||||| |||| |||||||| ||||| |||| ||| | |||||| ||||||||||    
T  9658928 tgtcggtgttagacacgacacgtgtctgacaccggaacacgcctaattccaaggagtgtccgtgcttcat 9658997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 12236723 - 12236776
Alignment:
Q  19 cgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| || |||||||||||| |||| | || |||||||||||||||||    
T  12236723 cgacacatgttcggcaccgggacacgcctaacctgaggagtgttcgtgcttcat 12236776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 24831861 - 24831914
Alignment:
Q  8 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 61  Q
    ||||||| |||| ||| || || |||| ||||||||||||||||||||||||||    
T  24831861 ggtgtcaaacacaacatatatctgacatcgggacacgtctaatccgaagagtgt 24831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 7378028 - 7378096
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||    ||||||||||||||||| |||||| ||  ||||| ||||||||||    
T  7378028 tgtcggtgtcggacacgacatgcatccgacaccgggacacggctaatctgagaagtgtccgtgcttcat 7378096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 7625187 - 7625239
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattgataa 78  Q
    ||||||||||||| |||||  |||||| | ||||||||||||||||| |||||    
T  7625187 tgtccgacaccggaacacgcttaatccaaggagtgttcgtgcttcatagataa 7625239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 7977840 - 7977772
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||| ||| |||||||||| ||  ||||| ||||||  | |||||||||||||||||    
T  7977840 tgtcggtgtcggacacaacatatgtccgacaacgaaacacgcctaatctaaggagtgttcgtgcttcat 7977772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 9107369 - 9107301
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||| ||   ||||||||||||||||||  ||||||||| |||||  ||||||||||    
T  9107369 tgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcat 9107301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 16488589 - 16488521
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| |||| | ||| |||||||| || |||| | || ||||||||||||||    
T  16488589 tgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcat 16488521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 8e-22; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 2438729 - 2438660
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcatt 73  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  2438729 tgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatt 2438660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 18841023 - 18840955
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||||||    
T  18841023 tgtcggtgtcagacacgacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 18840955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 15972922 - 15972990
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| |||||||| |||||||||  |||||||||||| ||| ||||||||||    
T  15972922 tgtcggtgtcggacacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcat 15972990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 37419803 - 37419871
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||  | ||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  37419803 tgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 37419871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 27286294 - 27286223
Alignment:
Q  1 tcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||| |||| ||||||||||||||||||||||||||||  |||||||  ||||||||  |||||||||    
T  27286294 tcatgtcgatgtcggacacgacacatgtccgacaccgggacatatctaatctaaagagtgtctgtgcttcat 27286223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 4207916 - 4207984
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| ||| ||||||||  |||||| ||||||||||||||||| || |||||    
T  4207916 tgtcggtgtcggacacgacacgtgttcgacaccgaaacacgtttaatccgaagagtgttcatgtttcat 4207984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 21782810 - 21782746
Alignment:
Q  8 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||| |||||||| ||||| |||||||||||||||||||| |  |||||| ||||||||||    
T  21782810 ggtgtcaggcacgacacgtgtccaacaccgggacacgtctaatctgtggagtgtccgtgcttcat 21782746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 38117165 - 38117101
Alignment:
Q  8 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||| ||||| |||| ||||||||||||||||||| ||||||||| | |||| ||||||||||    
T  38117165 ggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcat 38117101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 11223865 - 11223795
Alignment:
Q  1 tcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||| |||||| |||||||||| |||| |||||||||||||| |||||| || |||||| ||||||||||    
T  11223865 tcatgtaggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcat 11223795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 15907912 - 15907853
Alignment:
Q  13 cagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||| ||||||||||||||||| | |||| || |||||| ||||||||||    
T  15907912 cagacacgacacatatccgacaccgggacacgcccaatctgatgagtgtccgtgcttcat 15907853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 15909618 - 15909572
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||||    
T  15909618 tgtccgacacagggacacgcctaattcgaagagtgttcgtgcttcat 15909572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 35449561 - 35449626
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacacg--tctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||||||||||||||| | |||||  |||||||||| ||||||  |||||||||    
T  35449561 gtgtcagacacgacacatgtccgacaccagaacacgtctctaatccgaggagtgtctgtgcttcat 35449626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 19942314 - 19942383
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcatt 73  Q
    |||||||||| |||||| ||  |||| |||||||||||||| ||||||||| |||||| | |||||||||    
T  19942314 tgtcggtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcatt 19942383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 5367241 - 5367289
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatcc 52  Q
    |||||||||| |||||||||||| |||||| |||||||||| |||||||    
T  5367241 tgtcggtgtcggacacgacacatatccgactccgggacacgcctaatcc 5367289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27084315 - 27084375
Alignment:
Q  1 tcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 61  Q
    ||||||||||||| |||||||||| ||||| |||||| |||||| |||||| || ||||||    
T  27084315 tcatgtcggtgtcggacacgacacgtgtccaacaccgagacacgcctaatcggaggagtgt 27084375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 37559026 - 37559094
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||  ||||| ||||||||||||| |||||  |||||||| |||||| ||||||||||    
T  37559026 tgtcggtgtcggacttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcat 37559094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 21091772 - 21091839
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttca 71  Q
    |||| |||||||||| | ||| |||| |||||||||||||  ||| |||||||||||| |||||||||    
T  21091772 tgtcagtgtcagacaagccacctgtcggacaccgggacacacctattccgaagagtgtccgtgcttca 21091839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 10535733 - 10535687
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||| |||||| ||||||| ||||||||| |||||||||||||||||    
T  10535733 tgtctgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 10535687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 19959881 - 19959943
Alignment:
Q  10 tgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||  |||||||||||| ||| |||||||||| |||||| |  |||||||||    
T  19959881 tgtcagacacgacaagtgtccgacaccgagacgcgtctaatccaaagagtatcggtgcttcat 19959943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 37497169 - 37497238
Alignment:
Q  4 tgtcggtgtcagaca-cgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||| |||||||||| || |||||||||| | ||||||| |  ||||| ||||||||||    
T  37497169 tgtcggtgtcagacaccgacacatgttcggcaccgggacatggctaatcccagaagtgtccgtgcttcat 37497238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 20242737 - 20242669
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||| |||| |||| |||||  ||||||| || |||||||||||||  |||||||||    
T  20242737 tgtcggtgtcggacacaacacgtgtctgacacgaggacacgccttatccgaagagtgtctgtgcttcat 20242669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 30404860 - 30404792
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||| ||| |||||||||||||||||||||| ||||| | |||||| ||  || ||| |||||||||    
T  30404860 tgtcggcgtcggacacgacacatgtccgacaccaggacatgcctaatctgagaagcgtttgtgcttcat 30404792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 34993980 - 34993924
Alignment:
Q  16 acacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||  |||||||||| |||||||| ||||| | | |||||||||||||||||    
T  34993980 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcat 34993924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 30982877 - 30982809
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||| ||||||||||    
T  30982877 tgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcat 30982809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 23292996 - 23292928
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  23292996 tgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 23292928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 24613703 - 24613632
Alignment:
Q  1 tcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||||||| | |||||| ||||||||||    
T  24613703 tcatgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcat 24613632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 29205528 - 29205591
Alignment:
Q  15 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattgataa 78  Q
    ||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||| |||||    
T  29205528 gacacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatagataa 29205591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 36635384 - 36635447
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||  ||| |||||||||||||| |||||||||||||||| ||||||||||    
T  36635384 gtgtcagacacgacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtgcttcat 36635447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 12797348 - 12797282
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttc 70  Q
    |||||||||| ||||||| ||||||| |||||||||||| ||||||||||| || ||||||||||||    
T  12797348 tgtcggtgtcggacacgatacatgtctgacaccgggacaagtctaatccgaggaatgttcgtgcttc 12797282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 715603 - 715547
Alignment:
Q  16 acacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||||    
T  715603 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 715547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 752929 - 752873
Alignment:
Q  16 acacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||||    
T  752929 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 752873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 12895284 - 12895216
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||  | ||||||| ||||||||| ||||||||| |||||||||||||||||    
T  12895284 tgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcat 12895216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 22234889 - 22234821
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| ||||||||||| ||||||  |||||||||  ||||||||||||||||    
T  22234889 tgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcat 22234821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 34306814 - 34306746
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| |||||||||||| |||||| |||||| || || ||||||||||||||    
T  34306814 tgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcat 34306746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 14465070 - 14465007
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||| ||| |||||| ||||||||||||||| || |||||| ||||||||||    
T  14465070 gtgtcagacacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcat 14465007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 47264043 - 47264114
Alignment:
Q  1 tcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||| ||||||||| |||||||||||| |||||| ||||||| ||||||||||||| ||  |||||||||    
T  47264043 tcatgttggtgtcagatacgacacatgtctgacaccaggacacgcctaatccgaagagcgtctgtgcttcat 47264114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 19482739 - 19482796
Alignment:
Q  15 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| |||||||  ||||||||| |||||||||||||||||    
T  19482739 gacacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcat 19482796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 23861439 - 23861371
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||| |||||||||||| | ||||  |||||| ||||| | |||||||||||||||||||    
T  23861439 tgtcggtgtcagatacgacacatgtctgtcaccaagacacgcctaattcaaagagtgttcgtgcttcat 23861371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 28964258 - 28964190
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||| ||||| |||||||||||| |||||||| |||||||| ||||||||| |||||| | ||||||||    
T  28964258 tgtctgtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcat 28964190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 35157995 - 35157927
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||||||||| ||||||| |||||  ||||||||  ||||| ||||||||||    
T  35157995 tgtcggtgtctgacacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcat 35157927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 3947766 - 3947703
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| |||||||||| ||||||||||| ||||||  ||||||||| |||||| ||||||||||    
T  3947766 gtgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcat 3947703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 20743277 - 20743210
Alignment:
Q  4 tgtcggtgtcagacac-gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttc 70  Q
    ||||| |||||||||| ||||| ||||||||||||| |||| |||||||||| |||||| ||||||||    
T  20743277 tgtcgatgtcagacaccgacacgtgtccgacaccggaacacatctaatccgatgagtgtccgtgcttc 20743210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 4157198 - 4157268
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattg 74  Q
    |||||||||| ||||||||||||||||||||||| || ||  ||||| ||| ||||||  |||||||||||    
T  4157198 tgtcggtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcattg 4157268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 4157485 - 4157555
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattg 74  Q
    |||||||||| ||||||||||||||||||||||| || ||| ||||| ||| ||||||   ||||||||||    
T  4157485 tgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgtctatgcttcattg 4157555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 8423729 - 8423660
Alignment:
Q  3 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||| |||||||||  ||||||||||||||||||| |||||| ||  ||||| ||||| ||||    
T  8423729 atgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcat 8423660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 21945552 - 21945609
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 61  Q
    |||||||||| |||| ||||||||||||||||||  ||||| ||||||||| ||||||    
T  21945552 tgtcggtgtcggacatgacacatgtccgacaccgcaacacgcctaatccgaggagtgt 21945609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 35161096 - 35161153
Alignment:
Q  15 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||||||||||| ||||  |||||||||| ||||| ||||||||||    
T  35161096 gacacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcat 35161153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 37203324 - 37203369
Alignment:
Q  27 gtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  37203324 gtccgacaccgggacacgtctaatccgagaagtgtccgtgcttcat 37203369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 46715461 - 46715416
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttca 71  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  46715461 tgtccgacaccggcacatgtctaatccgaggagtgttcgtgcttca 46715416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 49431075 - 49431132
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 61  Q
    |||||||||| |||||||||| ||||| ||||||||||||| || |||||| ||||||    
T  49431075 tgtcggtgtcggacacgacacgtgtccaacaccgggacacgccttatccgaggagtgt 49431132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 3064926 - 3064870
Alignment:
Q  16 acacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||||| | | |||||| ||||||||| |||||| ||||||||||    
T  3064926 acacgacacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcat 3064870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 16073443 - 16073511
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||||| |||||||||||||   |||||| ||||||||| |||||| | ||||||||    
T  16073443 tgtcggtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcat 16073511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 29205493 - 29205533
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacg 44  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  29205493 tgtcggtgttggacacgacacatgtccgacaccgggacacg 29205533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 44081565 - 44081509
Alignment:
Q  16 acacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||| ||| |||||| | |||| |||||||| ||||||||||||||||||||    
T  44081565 acacgacacgtgttcgacactgagacatgtctaatctgaagagtgttcgtgcttcat 44081509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 7214523 - 7214468
Alignment:
Q  17 cacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||||||||||| | | ||||||||| || |||| |||||||||    
T  7214523 cacgacacatgtccgacaccgggaaatgcctaatccgatgattgtttgtgcttcat 7214468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 21873356 - 21873309
Alignment:
Q  20 gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgc 67  Q
    ||||| ||||||||||||||||||||||||||| | ||||||| ||||    
T  21873356 gacacgtgtccgacaccgggacacgtctaatccaaggagtgtttgtgc 21873309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 21929217 - 21929170
Alignment:
Q  20 gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgc 67  Q
    ||||| ||||||||||||||||||||||||||| | ||||||| ||||    
T  21929217 gacacgtgtccgacaccgggacacgtctaatccaaggagtgtttgtgc 21929170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 30522913 - 30522858
Alignment:
Q  6 tcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 61  Q
    |||| |||| ||||||||||| || ||||||| |||||||||||||| ||||||||    
T  30522913 tcggcgtcaaacacgacacatatctgacaccgagacacgtctaatccaaagagtgt 30522858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 30094084 - 30094126
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgct 68  Q
    |||| |||||||||||||| |||||||||||||||| ||||||    
T  30094084 tgtcggacaccgggacacgcctaatccgaagagtgtccgtgct 30094126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Complemental strand, 482237 - 482180
Alignment:
Q  20 gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattgata 77  Q
    ||||| |||| |||||| | ||||||||||||||| |||||| | |||||||||||||    
T  482237 gacacgtgtctgacacctgaacacgtctaatccgatgagtgtccatgcttcattgata 482180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 21345544 - 21345475
Alignment:
Q  3 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||| |||| ||| ||||||| ||| | ||||||||| |||| |  |||||||||    
T  21345544 atgtcggtgtcagacacgatacatatccaacaccggtacatgcctaatccgaggagtatgtgtgcttcat 21345475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 24343561 - 24343630
Alignment:
Q  4 tgtcggtgtcagacac-gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||| ||| | ||||||||||||||||||| ||| || || |||||| ||||||||||    
T  24343561 tgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcat 24343630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 30103367 - 30103310
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 61  Q
    ||||||||||| |||||||| ||||| |||| | |||||| |||||||||| ||||||    
T  30103367 tgtcggtgtcaaacacgacatatgtctgacatcaggacacatctaatccgaggagtgt 30103310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 30299009 - 30299046
Alignment:
Q  35 ccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  30299009 ccgggacacgtctaatccgaggagtgtccgtgcttcat 30299046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 30327877 - 30327914
Alignment:
Q  35 ccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  30327877 ccgggacacgtctaatccgaggagtgtccgtgcttcat 30327914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 36409502 - 36409469
Alignment:
Q  16 acacgacacatgtccgacaccgggacacgtctaa 49  Q
    ||||||||||||||| ||||||||||||||||||    
T  36409502 acacgacacatgtcctacaccgggacacgtctaa 36409469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 36423668 - 36423635
Alignment:
Q  16 acacgacacatgtccgacaccgggacacgtctaa 49  Q
    ||||||||||||||| ||||||||||||||||||    
T  36423668 acacgacacatgtcctacaccgggacacgtctaa 36423635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 40179645 - 40179596
Alignment:
Q  5 gtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccga 54  Q
    ||||||||| |||||||||||||| |||||||  |||||| |||||||||    
T  40179645 gtcggtgtcggacacgacacatgttcgacaccatgacacgcctaatccga 40179596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 53381601 - 53381532
Alignment:
Q  4 tgtcggtgtcagacac-gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||| ||| | | ||||||||||||||||  ||||||||| |||||| ||||||||||    
T  53381601 tgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 53381532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 12884401 - 12884349
Alignment:
Q  20 gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| ||| ||||| |||| |||||||||||||| |||||| ||||||||||    
T  12884401 gacacgtgttcgacatcggggcacgtctaatccgaggagtgtccgtgcttcat 12884349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 19312395 - 19312463
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| |||| || ||||||| |||||||||||| ||||||||||||| ||  ||||| |||| |||||    
T  19312395 tgtcgttgtcggatacgacacgtgtccgacaccgagacacgtctaatctgagaagtgtccgtgtttcat 19312463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 9828104 - 9828172
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  9828104 tgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcat 9828172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 5898275 - 5898211
Alignment:
Q  5 gtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgctt 69  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||||    
T  5898275 gtcggtgtcagacacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctt 5898211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 22515897 - 22515829
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||||| |||||||||| |||||| ||||||||| |||||| ||||||||||    
T  22515897 tgtcggtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcat 22515829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 40258943 - 40258875
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||||| | ||||||||    
T  40258943 tgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcat 40258875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 47989557 - 47989625
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||||||||||||| |||| ||||||||| ||||||||| |||||| ||||||||||    
T  47989557 tgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcat 47989625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 43492504 - 43492450
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagag 58  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||||||||||||    
T  43492504 tgtcggtgtcagacacaacacatgtccgacaccggcacacgcctaatccgaagag 43492450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 5944354 - 5944411
Alignment:
Q  15 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| |||||||||||||||||||| ||| ||||||||| |||||||||||||||||    
T  5944354 gacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcat 5944411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 1815306 - 1815362
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtg 60  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||| || |||||    
T  1815306 tgtcggtgtccgacacgacacatgtccgacaccgggacacgcctaatctgaggagtg 1815362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 38078671 - 38078603
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||||||| | ||||| ||||||| ||||||||| |||| ||||||||||||    
T  38078671 tgtcggtgtcggacacgacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgcttcat 38078603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 40917809 - 40917877
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||  |||||||||| ||||||||||||||||||| ||||||||| || ||| ||||||||||    
T  40917809 tgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcat 40917877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 1486709 - 1486646
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||| ||||||  |||||||||    
T  1486709 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 29163391 - 29163321
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattg 74  Q
    |||||||||| |||||||||| || | |||||||||||||| |||||| ||  ||||||||||||||||||    
T  29163391 tgtcggtgtcggacacgacacgtgcctgacaccgggacacggctaatcagagaagtgttcgtgcttcattg 29163321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 6427535 - 6427592
Alignment:
Q  15 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||||||||||||||||| |||||| || |||||| ||||||||||    
T  6427535 gacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcat 6427592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 42359459 - 42359390
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcatt 73  Q
    |||||||||| |||| |||   ||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  42359459 tgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatt 42359390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 52284764 - 52284809
Alignment:
Q  6 tcggtgtcagacacgacacatgtccgacaccgggacacgtctaatc 51  Q
    |||||||||||||||||||||||||||||||  |||||||||||||    
T  52284764 tcggtgtcagacacgacacatgtccgacaccaagacacgtctaatc 52284809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 9690267 - 9690215
Alignment:
Q  20 gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| ||||||||||||||||||| |||||||| |||||||| |||||||||    
T  9690267 gacacgtgtccgacaccgggacacgcctaatccggagagtgtttgtgcttcat 9690215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 46348393 - 46348325
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| |||||||||||| |||||| || |||||| | |||| ||||||||||    
T  46348393 tgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcat 46348325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 51410074 - 51410142
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| | |||||||||| |||||| ||||||| | |||| ||||||||||||    
T  51410074 tgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcat 51410142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 9629899 - 9629856
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtct 47  Q
    ||||| |||| |||||||||||||||||||||||||||||||||    
T  9629899 tgtcgatgtcggacacgacacatgtccgacaccgggacacgtct 9629856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 22881611 - 22881569
Alignment:
Q  30 cgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||||||||| |||||| ||||||||||    
T  22881611 cgacaccgggacacgtctaatccgaggagtgtccgtgcttcat 22881569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 25361946 - 25362010
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||  ||||||||||||| ||||  |||||||||||||||| ||||||||||    
T  25361946 tgtcggtgtcggacacgaca--tgtccgacaccggaacac--ctaatccgaagagtgtccgtgcttcat 25362010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 29144368 - 29144322
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  29144368 tgtccgacaccggaacacgcctaatccgaagagtgtccgtgcttcat 29144322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 46940796 - 46940750
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  46940796 tgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcat 46940750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 17778617 - 17778670
Alignment:
Q  19 cgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||| ||||||||||||||||| | |||||||||  ||||||||||||||||    
T  17778617 cgacacgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 18190118 - 18190061
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 61  Q
    ||||| |||||||||| |||| ||||||||||||||||||  ||||||||| ||||||    
T  18190118 tgtcgatgtcagacacaacacgtgtccgacaccgggacacacctaatccgaggagtgt 18190061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 18556452 - 18556387
Alignment:
Q  7 cggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||| |||||| | |||||||| |||||||| |||||||||  ||||| ||||||||||    
T  18556452 cggtgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcat 18556387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 34741899 - 34741963
Alignment:
Q  8 ggtgtcagacacgaca-catgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||| ||||||||| | |||||||||| |||||||| |||||||||||||||| ||||||||||    
T  34741899 ggtgtctgacacgacaacgtgtccgacac-gggacacgcctaatccgaagagtgtccgtgcttcat 34741963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 16297287 - 16297223
Alignment:
Q  8 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||| ||||||||   ||||||||||| ||||||| ||||||||| |||||| ||||||||||    
T  16297287 ggtgtcggacacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 33202956 - 33203020
Alignment:
Q  8 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||| |||| |||||||||| |||||| ||||||||| |||| |  |||||||||    
T  33202956 ggtgtcagacacgatacatatccgacaccgtgacacgcctaatccgaggagtatatgtgcttcat 33203020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 15765829 - 15765875
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||| ||||| |||||||| |||||||||||||||| ||||||||||    
T  15765829 tgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcat 15765875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 40181922 - 40181976
Alignment:
Q  6 tcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtg 60  Q
    |||||||| ||||| |||| ||||| ||||||||||||| ||||||||| |||||    
T  40181922 tcggtgtcggacacaacacgtgtcctacaccgggacacgcctaatccgaggagtg 40181976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 52903317 - 52903363
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||| || || |||||||||| ||||||||||    
T  52903317 tgtccgacaccgggacacggcttattcgaagagtgtccgtgcttcat 52903363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 2896132 - 2896083
Alignment:
Q  3 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatcc 52  Q
    |||||||||||||||||||||  ||||||| ||||||||||  |||||||    
T  2896132 atgtcggtgtcagacacgacatgtgtccgagaccgggacacacctaatcc 2896083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 12919005 - 12919062
Alignment:
Q  15 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||| ||||| |||||||| || ||||||  ||||||||||||||||    
T  12919005 gacacgacacgtgtctgacacggggacacggcttatccgagaagtgttcgtgcttcat 12919062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 19637817 - 19637890
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattgata 77  Q
    |||||||||| ||||||| |||| |||||||||||||| |  ||||||||| |||| || |||| |||| ||||    
T  19637817 tgtcggtgtcggacacgatacatatccgacaccgggacgcccctaatccgaggagtatttgtgcatcatagata 19637890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 27966011 - 27965942
Alignment:
Q  3 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| |||||||||||| | | || | |||||||||||||| ||||||||| |||||| | ||||||||    
T  27966011 atgtccgtgtcagacacgcctcgtgcctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 27965942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 16164297 - 16164257
Alignment:
Q  21 acacatgtccgacaccgggacacgtctaatccgaagagtgt 61  Q
    |||| ||||||||||| ||||||| ||||||||||||||||    
T  16164297 acacgtgtccgacaccaggacacgcctaatccgaagagtgt 16164257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 21530738 - 21530778
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacg 44  Q
    |||||||||| |||||||||||||||||||||  |||||||    
T  21530738 tgtcggtgtcggacacgacacatgtccgacactaggacacg 21530778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 26830641 - 26830701
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgctt 69  Q
    ||||||||||| |||| ||| ||| ||||||||||| |||||| || |||||| |||||||    
T  26830641 gtgtcagacactacacgtgttcgataccgggacacgcctaatcagaggagtgtccgtgctt 26830701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 8e-19; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 22652036 - 22652104
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  22652036 tgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcat 22652104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 44462205 - 44462155
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccga 54  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44462205 tgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccga 44462155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 44469738 - 44469688
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccga 54  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44469738 tgtcggtgtcagacacgatacatgtccgacaccgggacacgtctaatccga 44469688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 29447504 - 29447572
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||||| || |||||| ||||||||||    
T  29447504 tgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcat 29447572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 8343381 - 8343444
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||||||||||  |||||||||    
T  8343381 gtgtccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcat 8343444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 29510303 - 29510235
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||| | ||||||||||||||||||  ||||||||| |||||| ||||||||||    
T  29510303 tgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 29510235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 5813641 - 5813707
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttc 70  Q
    |||||||||| |||||||||| ||||||||||||||||||| |||||  || |||||| ||||||||    
T  5813641 tgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 11803333 - 11803387
Alignment:
Q  18 acgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||||| || ||||||||||||||| |||||| ||||||||||    
T  11803333 acgacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgcttcat 11803387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 31557047 - 31557093
Alignment:
Q  6 tcggtgtcagacacgacacatgtccgacaccgggacacgtctaatcc 52  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  31557047 tcggtgtcagacacgacacatgtccgacaccaggacacgcctaatcc 31557093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 33405394 - 33405330
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgct 68  Q
    |||||||||| ||||||||||||||| |||||| ||||||| ||||||| | |||||| ||||||    
T  33405394 tgtcggtgtcggacacgacacatgtctgacacctggacacggctaatccaatgagtgtccgtgct 33405330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 12570506 - 12570443
Alignment:
Q  6 tcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgctt 69  Q
    |||||||||||||| |||| ||||||||||| ||||||| |||||| ||||| ||| |||||||    
T  12570506 tcggtgtcagacactacacgtgtccgacaccaggacacgcctaatctgaagattgtccgtgctt 12570443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 12570732 - 12570669
Alignment:
Q  6 tcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgctt 69  Q
    |||||||||||||| |||| ||||||||||| ||||||| |||||| ||||| ||| |||||||    
T  12570732 tcggtgtcagacactacacgtgtccgacaccaggacacgcctaatctgaagattgtccgtgctt 12570669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 29447112 - 29447041
Alignment:
Q  1 tcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||| |||||||||  |||| |||||| ||||||| ||||||| | |||||| ||||||||||    
T  29447112 tcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgcttcat 29447041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 8343038 - 8343084
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||||    
T  8343038 tgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcat 8343084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 11944731 - 11944793
Alignment:
Q  10 tgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| ||||||||  | |||||||||| |||||| ||||||||| |||||||||||||||||    
T  11944731 tgtcatacacgacatgtatccgacaccgagacacgcctaatccgatgagtgttcgtgcttcat 11944793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 22943348 - 22943302
Alignment:
Q  15 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 61  Q
    |||||||||| ||||||||||||||||||| ||||||||| ||||||    
T  22943348 gacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgt 22943302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 926798 - 926729
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcatt 73  Q
    |||||||||| ||| |||||| ||||||||||||||||| |  | |||||| |||||| |||||||||||    
T  926798 tgtcggtgtcggacgcgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcatt 926729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 14134747 - 14134816
Alignment:
Q  3 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||| ||||||||| |||||| |||| ||||||| ||||| ||| |||||| |||| |||||    
T  14134747 atgtcggtgtcaaacacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcat 14134816  T

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Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 20679405 - 20679336
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcatt 73  Q
    |||||||||||||| | |||| ||||||||||||||||||| || | |||| |||||| | |||||||||    
T  20679405 tgtcggtgtcagacgcaacacgtgtccgacaccgggacacgccttaaccgaggagtgtccatgcttcatt 20679336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 3951546 - 3951478
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||||| |||| ||||| || ||||| ||||||| | |||| | ||||||||||    
T  3951546 tgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcat 3951478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 4122242 - 4122182
Alignment:
Q  10 tgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttc 70  Q
    ||||| ||||||||| |||  |||||||| ||||||||||||| |||||||| ||||||||    
T  4122242 tgtcaaacacgacacgtgttggacaccggaacacgtctaatccaaagagtgtccgtgcttc 4122182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 12402673 - 12402617
Alignment:
Q  16 acacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||| ||||||| |||||||||| |||||| ||||  ||||||||||||||||||||    
T  12402673 acacaacacatgcccgacaccggaacacgtataatttgaagagtgttcgtgcttcat 12402617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 15816124 - 15816060
Alignment:
Q  8 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||| ||||||||||   ||||||||||||||||| |||||||||  ||||| ||||||||||    
T  15816124 ggtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcat 15816060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 36450760 - 36450696
Alignment:
Q  8 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||| |||||||| | ||||||||||| ||||||| ||||||||| ||||||  |||||||||    
T  36450760 ggtgtcggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcat 36450696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 38079049 - 38079112
Alignment:
Q  5 gtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgct 68  Q
    |||| |||| |||||||| |||||||||||||||| ||||| ||||| ||| ||||| ||||||    
T  38079049 gtcgatgtcggacacgacgcatgtccgacaccgggccacgtataatctgaaaagtgtccgtgct 38079112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 126357 - 126295
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtg 66  Q
    |||| ||||| |||||||||| ||||| | ||||||||||| ||||||||| |||||| ||||    
T  126357 tgtcagtgtcggacacgacacgtgtccaataccgggacacggctaatccgaggagtgtccgtg 126295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 6065650 - 6065588
Alignment:
Q  10 tgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||| |||||||||||||||||||||||| |||||  |||| | | |||||| ||||||||||    
T  6065650 tgtcggacacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcat 6065588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 40064033 - 40064075
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgct 68  Q
    |||||||||||||||||| |||||||||| |||||| ||||||    
T  40064033 tgtccgacaccgggacacatctaatccgaggagtgtccgtgct 40064075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 17751704 - 17751773
Alignment:
Q  4 tgtcggtgtcagacac-gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||| ||| |||  |||||||||||||||| ||||||||| |||||| || |||||||    
T  17751704 tgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcat 17751773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 17760691 - 17760760
Alignment:
Q  4 tgtcggtgtcagacac-gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||| ||| |||  |||||||||||||||| ||||||||| |||||| || |||||||    
T  17760691 tgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcat 17760760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 18407779 - 18407836
Alignment:
Q  15 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||||||||  ||||||| |||||  || |||||| ||||||||||    
T  18407779 gacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcat 18407836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 949275 - 949207
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||| | || ||||||||| |||||||||| |||||  |||||| || || ||||||||||||||    
T  949275 tgtcggtgccggatacgacacatatccgacaccgagacactcctaatctgaggaatgttcgtgcttcat 949207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 24413569 - 24413501
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||| ||||| |||||||  | ||||| ||| |||||||||||||||||||  ||||| ||||||||||    
T  24413569 tgtcagtgtcggacacgatgcgtgtccaacagcgggacacgtctaatccgagaagtgtccgtgcttcat 24413501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 44067598 - 44067646
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattg 74  Q
    ||||||||||| ||||||| ||||| ||| |||||| ||||||||||||    
T  44067598 tgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcattg 44067646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 8e-19; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 598257 - 598325
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||| ||||||||||    
T  598257 tgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcat 598325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 43027469 - 43027406
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  43027469 gtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcat 43027406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 15680858 - 15680926
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| |||||||||||| |||||||||||| ||| |||||| ||||||||||    
T  15680858 tgtcggtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcat 15680926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 21880201 - 21880269
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||||||||||||||| ||||||| |||||||||  ||||| ||||||||||    
T  21880201 tgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcat 21880269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 33994261 - 33994329
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||||||||||| |||||| |||||| ||||||| | ||||||||||| |||||    
T  33994261 tgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgtttcat 33994329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 5409836 - 5409773
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  5409836 gtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 5409773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 21864857 - 21864925
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| |||| |||||||||| ||||||||||||||||||||||||| ||| ||||||  |||||||||    
T  21864857 tgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcat 21864925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 24339702 - 24339770
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| | ||||||||||||||||| ||||||||| |||||  ||||||||||    
T  24339702 tgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcat 24339770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 32094020 - 32093956
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccggg-acacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| |||||||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  32094020 gtgtcggacacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcat 32093956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 32308180 - 32308248
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||  ||||||||||||||||||||||| |||||  ||||||||| |||||||| ||||||||    
T  32308180 tgtcggtgttggacacgacacatgtccgacaccgagacacagctaatccgaggagtgttcatgcttcat 32308248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 21831832 - 21831903
Alignment:
Q  1 tcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||| ||||||||||||| ||||| || |||| ||||||||  |||||||||| ||||||||    
T  21831832 tcatgtcggtgtcaaacacgacacatgtgcgacatcgagacaagtctaatcttaagagtgttcatgcttcat 21831903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 13770750 - 13770810
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgctt 69  Q
    ||||| ||||| |||| ||||||||||||| ||||| |||||||||||||||| |||||||    
T  13770750 gtgtcggacacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 22484074 - 22484142
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||| ||||||||||||||| || |||| |||| ||||||  ||||| ||||||||||    
T  22484074 tgtcggtgtcagacatgacacatgtccgacatcgagacatgtctgatccgagaagtgtccgtgcttcat 22484142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 32287473 - 32287405
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||| ||||  ||||||||||||||||||  ||||||||| |||||| ||||||||||    
T  32287473 tgtcggtgtcggacatgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 32287405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 1433513 - 1433576
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| |||| ||||  ||||||||||| ||||||||||||||||| |||||| ||||||||||    
T  1433513 gtgtcggacaagacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcat 1433576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 2334314 - 2334377
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| ||||||||||||||||||||| |  ||||||||||||||| |||||| |||| |||||    
T  2334314 gtgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgtccgtgtttcat 2334377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 7438763 - 7438834
Alignment:
Q  1 tcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||| ||||||||||||| ||||||  ||||||| ||||| | | |||||| ||||||||||    
T  7438763 tcatgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgcttcat 7438834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 7973134 - 7973087
Alignment:
Q  3 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaat 50  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  7973134 atgttggtgtgagacacgacacatgtccgacatcgggacacgtctaat 7973087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 9778559 - 9778622
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| ||||| |||| ||||||||||||||||||| ||||||| | |||||| ||||||||||    
T  9778559 gtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcat 9778622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 26033460 - 26033389
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattga 75  Q
    ||||||||||||||| ||||| ||||||| |||| |||||  ||||||||| |||||| |||| ||||||||    
T  26033460 tgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaatccgaggagtgtccgtgtttcattga 26033389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 10043007 - 10043041
Alignment:
Q  18 acgacacatgtccgacaccgggacacgtctaatcc 52  Q
    |||||||||||||||||||||||||||||||||||    
T  10043007 acgacacatgtccgacaccgggacacgtctaatcc 10043041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 40287356 - 40287306
Alignment:
Q  20 gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttc 70  Q
    ||||||||||||||||||||||| | ||||||||| |||||| ||||||||    
T  40287356 gacacatgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 3554517 - 3554448
Alignment:
Q  3 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||| |||||||||||| ||  |||| | |||||||||||| ||||||||||  |||||||||    
T  3554517 atgtcggtgtcggacacgacacatatctaacactgagacacgtctaattcgaagagtgtctgtgcttcat 3554448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 8234198 - 8234243
Alignment:
Q  7 cggtgtcagacacgacacatgtccgacaccgggacacgtctaatcc 52  Q
    ||||||| ||||||||||||||||||||||| |||||| |||||||    
T  8234198 cggtgtcggacacgacacatgtccgacaccgagacacgcctaatcc 8234243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 20545242 - 20545186
Alignment:
Q  16 acacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||||||| ||||||||| |||| ||| ||||||  |||||||||    
T  20545242 acacgacacatgtccgacacggggacacgtttaattcgaggagtgtctgtgcttcat 20545186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 20549840 - 20549908
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||| ||||||||||||||  | |||||| ||||||||| |||||  ||||||||||    
T  20549840 tgtcggtgtcggacacaacacatgtccgacaatgagacacgcctaatccgaggagtgcccgtgcttcat 20549908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 3294300 - 3294257
Alignment:
Q  18 acgacacatgtccgacaccgggacacgtctaatccgaagagtgt 61  Q
    ||||||| ||||| ||||||||||||| ||||||||||||||||    
T  3294300 acgacacgtgtccaacaccgggacacgcctaatccgaagagtgt 3294257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 9408331 - 9408264
Alignment:
Q  6 tcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcatt 73  Q
    |||||||||||||||| | || |||||||||   ||||| |||||||||||| ||| |||||||||||    
T  9408331 tcggtgtcagacacgatatatatccgacaccaaaacacgcctaatccgaagaatgtccgtgcttcatt 9408264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 11665442 - 11665371
Alignment:
Q  1 tcatgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||  ||||||||| ||||||||||||  |||| |||||| ||| || ||| ||||||||||    
T  11665442 tcatgtcggtgtcgaacacgacacgtgtccgacaccgaaacacatctaatacgaggaatgtccgtgcttcat 11665371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 2533823 - 2533761
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttca 71  Q
    |||| |||||| |||| | |||||| ||||||||||  |||||||| ||||||||||||||||    
T  2533823 gtgtaagacacaacacgtatccgacgccgggacacgcgtaatccgaggagtgttcgtgcttca 2533761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 6490787 - 6490833
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||||||  |||||||| |||||| ||||||||||    
T  6490787 tgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcat 6490833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 10359670 - 10359716
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||| |||||||||||||||||  |||| ||||||||||    
T  10359670 tgtccgacaccgagacacgtctaatccgaaaggtgtccgtgcttcat 10359716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 24105749 - 24105795
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||| |||| |||| ||||||| |||||||||    
T  24105749 tgtccgacaccgggacacgcctaacccgaggagtgtttgtgcttcat 24105795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 40131987 - 40131941
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||||||||||| ||||||  |||||||||    
T  40131987 tgtccgacacagggacacgtctaatccgaggagtgtctgtgcttcat 40131941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 7197307 - 7197271
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccggga 40  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  7197307 tgtcggtgtcggacacaacacatgtccgacaccggga 7197271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 18035858 - 18035807
Alignment:
Q  20 gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||| || ||||||||||||||| |||||| ||||||||||    
T  18035858 gacacatgtctgacac-ggaacacgtctaatccgaggagtgtccgtgcttcat 18035807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 8e-19; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 40993345 - 40993277
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||| | ||||||||    
T  40993345 tgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcat 40993277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 20503514 - 20503582
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||  ||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||    
T  20503514 tgtcggtgttggacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 20503582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 55401124 - 55401192
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| |||||||||||| |||||| ||||||||| |||||| ||||||||||    
T  55401124 tgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcat 55401192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 29508498 - 29508569
Alignment:
Q  3 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattg 74  Q
    |||| |||||| ||||||||||| |||||||||||||||||||||||||| |  ||||| ||||||||||||    
T  29508498 atgttggtgtcggacacgacacacgtccgacaccgggacacgtctaatccaagaagtgtccgtgcttcattg 29508569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 4987290 - 4987221
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcatt 73  Q
    |||||||||  |||||||||| ||||||||||||||||||| ||||||||| |||||| ||| |||||||    
T  4987290 tgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcatt 4987221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 27505305 - 27505368
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| |||||||||| ||||||||||||||||| | ||||||||| |||||| ||||||||||    
T  27505305 gtgtctgacacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcat 27505368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 40052383 - 40052429
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  40052383 tgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcat 40052429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 8039834 - 8039766
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||| || ||||||||||||||||||||||  ||||||||||||| |  |||||||||    
T  8039834 tgtcggtgtcggacatgagacatgtccgacaccgggacacgcttaatccgaagagtatctgtgcttcat 8039766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 15796289 - 15796225
Alignment:
Q  8 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||| ||||| |||| ||||| ||||||| ||||| ||||||| |||||||||||||||||||    
T  15796289 ggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcat 15796225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 25775578 - 25775626
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattg 74  Q
    ||||||||||| ||||||| ||||||||| |||||||||||||||||||    
T  25775578 tgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcattg 25775626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 8789560 - 8789490
Alignment:
Q  4 tgtcggtgtcagacacga--cacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||  |||||||| ||||||| |||||| ||||||||| |||||| ||||||||||    
T  8789560 tgtcggtgtcggacacgacacacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttcat 8789490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 3631738 - 3631796
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgc 67  Q
    ||||| |||||||||||||||||||||| ||||||| ||| ||||| |||||| |||||    
T  3631738 gtgtcggacacgacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 8842377 - 8842451
Alignment:
Q  3 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattgata 77  Q
    ||||||||||||||||||||||||||  || |  | |||||| ||||||||| |||||| |||||||||| ||||    
T  8842377 atgtcggtgtcagacacgacacatgttagatattgagacacgcctaatccgaggagtgtccgtgcttcatagata 8842451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 25093551 - 25093617
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttc 70  Q
    |||||||||| ||||| ||||||||||||||| |   ||| ||||||| ||||||||||||||||||    
T  25093551 tgtcggtgtcggacacaacacatgtccgacactgaagcacttctaatctgaagagtgttcgtgcttc 25093617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 26492213 - 26492147
Alignment:
Q  6 tcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||| ||||||||||||||| ||||||  |||||||||||||||| || ||| || |||||||    
T  26492213 tcggtgtcggacacgacacatgtctgacaccaagacacgtctaatccgaggaatgtccgcgcttcat 26492147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 34185100 - 34185054
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  34185100 tgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 34185054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 28812579 - 28812632
Alignment:
Q  8 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 61  Q
    |||||||||||||| |||||||||||| | ||||||| ||||||||| ||||||    
T  28812579 ggtgtcagacacgatacatgtccgacagcaggacacgcctaatccgaggagtgt 28812632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 34910393 - 34910434
Alignment:
Q  31 gacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  34910393 gacaccgggacacgtctaatccgaggagtgtccgtgcttcat 34910434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 49651775 - 49651718
Alignment:
Q  15 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||| ||||||||||||||||  |||||||||  ||||| ||||||||||    
T  49651775 gacacgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgcttcat 49651718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 2620051 - 2620003
Alignment:
Q  7 cggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaa 55  Q
    |||||| |||||||||||||||||| || ||||||||| ||||||||||    
T  2620051 cggtgttagacacgacacatgtccggcatcgggacacgcctaatccgaa 2620003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 5441033 - 5440969
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacac-gtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||||||||| |||||| ||||| | ||||| ||| |||||| ||||||||||    
T  5441033 gtgtcagacacgacacatgtccaacaccgagacacggcctaattcgaggagtgtccgtgcttcat 5440969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 11252025 - 11252093
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||| |||| |||||| || ||| ||||| ||||||||| ||||||  |||||||||    
T  11252025 tgtcggtgtcagacacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcat 11252093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 16000008 - 15999952
Alignment:
Q  16 acacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||| ||||||||||||||||||| ||||||| | |||||| ||||| ||||    
T  16000008 acacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcat 15999952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 17005614 - 17005550
Alignment:
Q  8 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||  |||| |||| |||||| |||||| |||||||||| ||||||| |||||||||    
T  17005614 ggtgtcagacataacacgtgtctgacaccaggacacctctaatccgaggagtgtttgtgcttcat 17005550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 25064971 - 25065031
Alignment:
Q  8 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgct 68  Q
    |||||| |||||||||| |||| ||||||||||||||  | |||||| |||||||||||||    
T  25064971 ggtgtcggacacgacacgtgtctgacaccgggacacggtttatccgaggagtgttcgtgct 25065031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 21720843 - 21720878
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgt 61  Q
    ||||||||||||||||||||||||||||| ||||||    
T  21720843 tgtccgacaccgggacacgtctaatccgatgagtgt 21720878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 45451602 - 45451641
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacac 43  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  45451602 tgtcggtgtcggacacgacacatgtccgacaccgagacac 45451641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 14832159 - 14832205
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaat 50  Q
    ||||||| || |||||||||| ||||||||||||||||||| |||||    
T  14832159 tgtcggtatcggacacgacacgtgtccgacaccgggacacgcctaat 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 25074866 - 25074912
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||  ||||||||| |||||||||||||||||    
T  25074866 tgtccgacactgggacacacctaatccgaggagtgttcgtgcttcat 25074912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 7171554 - 7171607
Alignment:
Q  8 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 61  Q
    |||||| |||||||||| |||||||||||| |||||| ||||||| | ||||||    
T  7171554 ggtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgt 7171607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 18426997 - 18427066
Alignment:
Q  3 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||| || ||||||| |||||| |||||||||||  |||||| || |||||| |||| |||||    
T  18426997 atgtcggtgtcggatacgacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcat 18427066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 24205029 - 24204980
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattga 75  Q
    ||||||||||| ||||||| ||||| ||| |||||| |||||||||||||    
T  24205029 tgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcattga 24204980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 8101946 - 8101894
Alignment:
Q  20 gacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||| |||| ||||| || |||||||||||| || |||||||||||||||||    
T  8101946 gacacgtgtcggacactggtacacgtctaatctgaggagtgttcgtgcttcat 8101894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 14338494 - 14338454
Alignment:
Q  3 atgtcggtgtcagacacgacacatgtccgacaccgggacac 43  Q
    |||||||||||||||||||||| | || |||||||||||||    
T  14338494 atgtcggtgtcagacacgacacgtatcggacaccgggacac 14338454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 70327 - 70394
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttca 71  Q
    |||||||||| |||||||||| ||||||||||| ||||| | ||||||||| ||||||||||||||||    
T  70327 tgtcggtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 15382534 - 15382591
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgt 61  Q
    |||||||||  |||||||||||||||||||||||||||||| ||||||||| ||||||    
T  15382534 tgtcggtgttggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgt 15382591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 21191066 - 21190997
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcatt 73  Q
    |||||||||| ||||| |||| |||||||| |||||||||| ||||||||| |||||| |||||||||||    
T  21191066 tgtcggtgtcggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcatt 21190997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 7677765 - 7677833
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||||||| ||| ||  |||||||||    
T  7677765 tgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcat 7677833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 21522810 - 21522878
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| |||||| |||||||||||| ||||||| |||||||| ||||| ||||    
T  21522810 tgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcat 21522878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 21533376 - 21533444
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| |||||| |||||||||||| ||||||| |||||||| ||||| ||||    
T  21533376 tgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcat 21533444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 30502398 - 30502330
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||||||||||||||||||| |||||| | ||||||| | || ||||||||||||||    
T  30502398 tgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 30542741 - 30542673
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||||||||||||||||||| |||||| | ||||||| | || ||||||||||||||    
T  30542741 tgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 17123096 - 17123164
Alignment:
Q  3 atgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||  ||||||| |||||||||||| ||||||||| ||||||||| |||||| ||||||||||    
T  17123096 atgtcggtgttggacacgaaacatgtccgaca-cgggacacgcctaatccgaggagtgtccgtgcttcat 17123164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 28588684 - 28588616
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||||| || |||||| |||||||  ||||||||||||||| | ||||||||    
T  28588684 tgtcggtgtcggacacgacacatatctgacaccaggacacgcttaatccgaagagtgtccatgcttcat 28588616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 19579761 - 19579831
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattg 74  Q
    |||| ||||| ||||||||| |||||  ||||||||||||| ||||||||| |||||| |||| |||||||    
T  19579761 tgtcagtgtcggacacgacatatgtctaacaccgggacacgcctaatccgaggagtgtacgtgtttcattg 19579831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 21194122 - 21194068
Alignment:
Q  15 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgctt 69  Q
    ||||||||||||||| ||||||||| |||| ||||||||| |||||| |||||||    
T  21194122 gacacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctt 21194068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 21351898 - 21351852
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| || |||||||||||||||||||||| ||||||||||    
T  21351898 tgtccgacactggaacacgtctaatccgaagagtgtccgtgcttcat 21351852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 16304425 - 16304368
Alignment:
Q  15 gacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| || ||||||||| |||||||||||||||| || ||| ||||||||||    
T  16304425 gacacgacacgtgcccgacaccgagacacgtctaatccgaggaatgtccgtgcttcat 16304368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 43001859 - 43001924
Alignment:
Q  9 gtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattg 74  Q
    ||||| |||||||||| ||||  ||||| ||||||| ||||||||| |||||| ||||||||||||    
T  43001859 gtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcattg 43001924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 18421851 - 18421778
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgg----gacacgtctaatccgaagagtgttcgtgcttcatt 73  Q
    |||||| ||| ||||||||||||||||| ||||||    |||||||||||||||| ||||||  ||||||||||    
T  18421851 tgtcggcgtcggacacgacacatgtccggcaccgggactgacacgtctaatccgaggagtgtctgtgcttcatt 18421778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 21542090 - 21542130
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacg 44  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  21542090 tgtcggtgtcggacacgacacgtgtccgacaccgggacacg 21542130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 32766942 - 32766874
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||  | ||||||| ||||||||||| ||| |||||||||| || |||||| ||||||||||    
T  32766942 tgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcat 32766874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 42893409 - 42893477
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||| |||| ||||||||||| ||||||| |||||  || |||||| | ||||||||    
T  42893409 tgtcggtgtcagacacaacacgtgtccgacaccaggacacgcctaatatgaggagtgtccatgcttcat 42893477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 14873588 - 14873639
Alignment:
Q  21 acacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||| ||||| ||||||||||||| ||||||||| |||||| ||||||||||    
T  14873588 acacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcat 14873639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 15410425 - 15410382
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgctt 69  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||    
T  15410425 tgtccaacaccgggacacgtctaagccgaggagtgttcgtgctt 15410382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 2436982 - 2437028
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||  |||||| ||||||||| |||||||||||||||||    
T  2436982 tgtccgacaccaagacacgcctaatccgaggagtgttcgtgcttcat 2437028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 19820376 - 19820330
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||| |||||| || |||||| ||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcat 19820330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 30099048 - 30098982
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttc 70  Q
    |||||||||| || ||||||| |||| ||||| |||||||| || |||| | |||||||||||||||    
T  30099048 tgtcggtgtcggatacgacacgtgtctgacacggggacacgccttatccaaggagtgttcgtgcttc 30098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 38464365 - 38464315
Alignment:
Q  22 cacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||||||  ||||||||| ||||||  |||||||||    
T  38464365 cacatgtccgacaccgggacacacctaatccgaggagtgtctgtgcttcat 38464315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 3966563 - 3966631
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||| ||||| ||||| |||  ||||| |||  |||||||||||||||||| |||||| ||||||||||    
T  3966563 tgtcagtgtcggacacaacatgtgtccaacagagggacacgtctaatccgaggagtgtccgtgcttcat 3966631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 17088362 - 17088402
Alignment:
Q  26 tgtccgacaccgggacacgtctaatccgaagagtgttcgtg 66  Q
    ||||||||||||||||||| ||||||||| |||||| ||||    
T  17088362 tgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 21814321 - 21814389
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| |||| | ||| |||||||| || |||| | || ||||||||||||||    
T  21814321 tgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcat 21814389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 4879 - 4823
Alignment:
Q  16 acacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||||    
T  4879 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcat 4823  T

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Target: scaffold0652 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 472 - 404
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||| | ||||||||||||||||||  ||||||||| |||||| ||||||||||    
T  472 tgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcat 404  T

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Target: scaffold0036 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 9742 - 9678
Alignment:
Q  8 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||| |||| |||| |||||||||| |||||||| |||||| ||||||||||    
T  9742 ggtgtcagacacgacacttgtctgacatcgggacacgtataatccgaggagtgtccgtgcttcat 9678  T

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Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 71785 - 71853
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| ||||| |||| ||||||||||||||||||| ||||||||| ||||||  |||||||||    
T  71785 tgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcat 71853  T

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Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 92875 - 92939
Alignment:
Q  8 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||| ||||||||||||||| |||||| ||||||| ||||||||| |||||| ||||||||||    
T  92875 ggtgtcggacacgacacatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcat 92939  T

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Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 241658 - 241722
Alignment:
Q  8 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||| |||||||||| ||||||||||||||||||| |||||||||  ||||| ||||||||||    
T  241658 ggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcat 241722  T

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Target: scaffold0136 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 3844 - 3780
Alignment:
Q  8 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||| |||||||||||||||||||| || |||||| ||||||||| |||||| | ||||||||    
T  3844 ggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcat 3780  T

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Target: scaffold0086 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 2988 - 3052
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgct 68  Q
    ||||||| ||||||||||||| ||| ||||||||| ||||| ||||||||| |||||| ||||||    
T  2988 tgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgct 3052  T

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Target: scaffold0053 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 8847 - 8915
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||||||| |||||||||| |||||||||||| |||||| |||||| || |||| | ||||||||||    
T  8847 tgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcat 8915  T

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Target: scaffold0361 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 14580 - 14644
Alignment:
Q  8 ggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    |||||| |||||||||| |||||||||||| |||||| ||||||  | |||||| ||||||||||    
T  14580 ggtgtcggacacgacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcat 14644  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 53240 - 53288
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatcc 52  Q
    |||||||||| |||| ||||| |||||||||||||||||||| ||||||    
T  53240 tgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatcc 53288  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 263371 - 263303
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcat 72  Q
    ||||||||||||||||||||| ||| ||| |||  |||||| ||||||||| |||||| |||| |||||    
T  263371 tgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggttcat 263303  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 17612 - 17539
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacgtctaatccgaagagtgttcgtgcttcattgata 77  Q
    ||||||||| |||||| | | |||||||||||||||||||| |||||| |  |||| | |||||||||| ||||    
T  17612 tgtcggtgttagacacaatatatgtccgacaccgggacacgcctaatcagctgagtttccgtgcttcatagata 17539  T

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Target: scaffold0697 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 1693 - 1733
Alignment:
Q  4 tgtcggtgtcagacacgacacatgtccgacaccgggacacg 44  Q
    |||||||||| |||||||||||||||||||||  |||||||    
T  1693 tgtcggtgtcggacacgacacatgtccgacactaggacacg 1733  T

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