View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14740_low_9 (Length: 315)
Name: NF14740_low_9
Description: NF14740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14740_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 48 - 311
Target Start/End: Complemental strand, 44082350 - 44082092
Alignment:
| Q |
48 |
catcacaataagaataatgctgattgctgaactggtaatgacaagtctgatttcacggaagagtaatatctgaatacattaaatgattttcaatattata |
147 |
Q |
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| T |
44082350 |
catcacaataagaataatgctgattgctgaactggtaatgacaagtctgatttcactgaagagtaatatctgaatacattaaatgatgttcaatattata |
44082251 |
T |
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| Q |
148 |
tgtcaacttttacttatactatacacaattattatgcatgaggccacaagttgctgaaagggaattttatcatctcttatatttctaggctctagcttcc |
247 |
Q |
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| T |
44082250 |
tgtcaacttttacttatactatacacaattattatgcatgaggccacaagttgctgaaagggaattttatcatctcttatatttctaggctctagcttcc |
44082151 |
T |
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| Q |
248 |
ctaaaatgtgttatatttaatttaatttaatttcccacagatctaagcaatcatgtccctttga |
311 |
Q |
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| T |
44082150 |
ctaaaatgtgttatatttaattta-----atttcccacagatctaagcaatcatgtccctttga |
44082092 |
T |
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