View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14741_high_13 (Length: 231)
Name: NF14741_high_13
Description: NF14741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14741_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 40394974 - 40394759
Alignment:
| Q |
1 |
aaatgtattttcaaaaatttataaatgacttcgatctctaatattatttattttatatatgaaagtaaaacagaaaatcctagaaggaaaaagtatgtac |
100 |
Q |
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| T |
40394974 |
aaatgtattttcaaaactttataaatgacttcgatctctaatattatttattttatatatgaaagtaaaacagaaaatcctagaaggaaaaagtatgtac |
40394875 |
T |
|
| Q |
101 |
atgtaattgtatagtcttctcacggaatggtaaggttacccaacaaattatattaaattcatagccgcgtacgacatatagatcaaaatggtaaaaactt |
200 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40394874 |
atgtaatcgtatagtcttctcacggaatggtaaggttacccaacaaattatattaaattcatagccgcgtacgacatatagatcaaaatggtaaaaactt |
40394775 |
T |
|
| Q |
201 |
ccaataattcaaaagt |
216 |
Q |
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|||||||||||||||| |
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| T |
40394774 |
ccaataattcaaaagt |
40394759 |
T |
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