View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14741_low_11 (Length: 326)
Name: NF14741_low_11
Description: NF14741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14741_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 24336547 - 24336849
Alignment:
| Q |
1 |
atgatgatctttcagttagaataagaaagcctagctcagaaatcttgatcaataaagatgtttactttgaaaagcaagagaagttaagggtaggattaaa |
100 |
Q |
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| T |
24336547 |
atgatgatctttcagtaagaataagaaagcctagctcagaaatcttgatcaataaagatgtttactttcaaaagcaagagaagttaagggtaggattgaa |
24336646 |
T |
|
| Q |
101 |
caatgaaaagaatagtttggcttctaactcaagaaatcatcttgttcaaatgcaaaatccattagatggagaaaagacaccaagaaaatcacttgaagta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24336647 |
caatgaaaagaatagtttggcttctaactcaagaaatcatcttgttcaaatgcaaaatccattagatggagaaaagacaccaagaaaatcacttgaagta |
24336746 |
T |
|
| Q |
201 |
tttggctcaccaaatccaatattgatcaataccaaaagaaattcattgaccaatgataaaaggttgatatttccaaaaatggaagaaattgataatgcaa |
300 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24336747 |
tttggttcaccaaatccaatattgatcaataccaaaagaaattcattgaccaatgataaaaggttgatatttccaaaaatggaagaaattgataatgcaa |
24336846 |
T |
|
| Q |
301 |
act |
303 |
Q |
| |
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||| |
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|
| T |
24336847 |
act |
24336849 |
T |
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