View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14741_low_14 (Length: 235)
Name: NF14741_low_14
Description: NF14741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14741_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 48 - 224
Target Start/End: Complemental strand, 9469043 - 9468867
Alignment:
| Q |
48 |
aaagctacattgttgaggtctctcaaactacattgttgaaggaaaattgtagaaatttccttttggtgttcatatttgatgaagcagtggttcacacatt |
147 |
Q |
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| T |
9469043 |
aaagctacattgttgaggtctctcaaactacattgttgaaggaaaattgtagaaatttccttttggtgttcatatttgatgaagcagtggttcacacatt |
9468944 |
T |
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| Q |
148 |
ttataataattaacatttgtataatgtgcaaggaaactacattgtgttgttctaatttatcataaagataaaaatga |
224 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9468943 |
ttataataattaacatttatataatgtgcaaggaaactacattgtgttgttctaatttatcataaagataaaaatga |
9468867 |
T |
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