View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14742_high_26 (Length: 213)

Name: NF14742_high_26
Description: NF14742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14742_high_26
NF14742_high_26
[»] chr5 (31 HSPs)
chr5 (1-111)||(13137312-13137422)
chr5 (116-213)||(1841016-1841113)
chr5 (116-212)||(3805413-3805509)
chr5 (116-212)||(32157425-32157521)
chr5 (116-212)||(27905484-27905580)
chr5 (121-212)||(18879629-18879720)
chr5 (110-213)||(19283623-19283726)
chr5 (118-213)||(26217429-26217524)
chr5 (116-187)||(29322067-29322138)
chr5 (111-213)||(10493378-10493475)
chr5 (111-205)||(34720110-34720204)
chr5 (116-213)||(11136702-11136799)
chr5 (118-205)||(27451037-27451124)
chr5 (111-205)||(34724086-34724180)
chr5 (111-212)||(5385129-5385230)
chr5 (110-167)||(38523335-38523392)
chr5 (116-212)||(1224568-1224664)
chr5 (121-205)||(26299455-26299539)
chr5 (117-205)||(34856951-34857039)
chr5 (118-200)||(14501398-14501480)
chr5 (140-213)||(4984004-4984077)
chr5 (116-205)||(43385802-43385891)
chr5 (157-213)||(28430594-28430650)
chr5 (142-205)||(39408749-39408812)
chr5 (139-205)||(19715800-19715866)
chr5 (139-213)||(27195450-27195524)
chr5 (116-212)||(20188354-20188450)
chr5 (141-205)||(26297934-26297998)
chr5 (157-213)||(41782739-41782795)
chr5 (142-205)||(39407011-39407074)
chr5 (116-186)||(22921442-22921512)
[»] chr7 (30 HSPs)
chr7 (111-212)||(26215716-26215817)
chr7 (111-212)||(36926408-36926509)
chr7 (116-205)||(5776612-5776701)
chr7 (118-212)||(3931389-3931483)
chr7 (118-212)||(37333703-37333797)
chr7 (117-205)||(666263-666351)
chr7 (116-212)||(43052286-43052382)
chr7 (118-205)||(7443835-7443922)
chr7 (116-212)||(42071524-42071620)
chr7 (117-211)||(17026039-17026133)
chr7 (118-212)||(222983-223077)
chr7 (116-187)||(45174641-45174712)
chr7 (117-187)||(5795559-5795629)
chr7 (116-212)||(49035105-49035201)
chr7 (116-187)||(388431-388502)
chr7 (116-187)||(15433633-15433704)
chr7 (139-213)||(45054820-45054894)
chr7 (116-205)||(7539698-7539787)
chr7 (116-213)||(30918934-30919031)
chr7 (163-212)||(22074612-22074661)
chr7 (110-175)||(37106144-37106209)
chr7 (149-213)||(18250685-18250749)
chr7 (116-187)||(28950359-28950429)
chr7 (112-175)||(42012255-42012318)
chr7 (119-213)||(23236821-23236910)
chr7 (146-212)||(20259970-20260036)
chr7 (145-194)||(35544226-35544275)
chr7 (145-213)||(8390177-8390245)
chr7 (116-156)||(27232479-27232519)
chr7 (157-213)||(41449192-41449248)
[»] chr4 (36 HSPs)
chr4 (119-212)||(50605462-50605555)
chr4 (116-212)||(19850136-19850232)
chr4 (117-212)||(49820383-49820478)
chr4 (116-212)||(9469432-9469527)
chr4 (116-212)||(43386538-43386634)
chr4 (116-212)||(48977008-48977104)
chr4 (118-205)||(21436313-21436400)
chr4 (109-212)||(53369059-53369162)
chr4 (116-202)||(52705597-52705683)
chr4 (116-201)||(7505428-7505513)
chr4 (111-212)||(22183762-22183863)
chr4 (111-187)||(44792846-44792922)
chr4 (111-205)||(51994082-51994176)
chr4 (121-199)||(52812976-52813054)
chr4 (116-212)||(79764-79860)
chr4 (116-212)||(25133937-25134033)
chr4 (118-184)||(45674310-45674376)
chr4 (130-212)||(51409154-51409236)
chr4 (121-213)||(12673707-12673799)
chr4 (116-204)||(22720748-22720836)
chr4 (116-187)||(12790211-12790282)
chr4 (139-202)||(46945225-46945288)
chr4 (118-203)||(40797160-40797245)
chr4 (118-205)||(4275589-4275676)
chr4 (119-161)||(49378183-49378225)
chr4 (119-204)||(38493652-38493737)
chr4 (157-213)||(44377650-44377706)
chr4 (111-187)||(55892736-55892812)
chr4 (170-212)||(5769796-5769838)
chr4 (139-212)||(5765251-5765324)
chr4 (139-212)||(5767495-5767568)
chr4 (157-213)||(16743158-16743214)
chr4 (116-212)||(28266784-28266875)
chr4 (111-167)||(36543313-36543369)
chr4 (158-212)||(52813045-52813099)
chr4 (116-205)||(50240941-50241030)
[»] chr3 (26 HSPs)
chr3 (111-212)||(39471119-39471220)
chr3 (111-212)||(52198775-52198876)
chr3 (116-212)||(38644264-38644360)
chr3 (116-213)||(5418047-5418144)
chr3 (116-205)||(39133782-39133871)
chr3 (120-212)||(25252882-25252974)
chr3 (121-213)||(33895925-33896017)
chr3 (121-212)||(20407790-20407881)
chr3 (116-213)||(30740736-30740833)
chr3 (111-187)||(41609313-41609389)
chr3 (120-202)||(32688567-32688649)
chr3 (111-203)||(27040593-27040685)
chr3 (146-212)||(39943772-39943838)
chr3 (147-213)||(52934261-52934327)
chr3 (116-213)||(9505880-9505972)
chr3 (111-160)||(23206992-23207041)
chr3 (116-200)||(46294289-46294373)
chr3 (116-211)||(7029139-7029234)
chr3 (121-211)||(7521781-7521866)
chr3 (139-213)||(40942922-40942996)
chr3 (148-213)||(12710096-12710160)
chr3 (164-208)||(51067744-51067788)
chr3 (116-187)||(54432944-54433015)
chr3 (140-202)||(30662813-30662875)
chr3 (157-205)||(15823227-15823275)
chr3 (111-175)||(53530233-53530297)
[»] chr2 (21 HSPs)
chr2 (111-212)||(36538076-36538177)
chr2 (117-212)||(20986069-20986164)
chr2 (118-212)||(44741336-44741430)
chr2 (111-203)||(27633141-27633233)
chr2 (118-187)||(33830896-33830965)
chr2 (116-203)||(2647649-2647736)
chr2 (116-211)||(26435771-26435866)
chr2 (140-212)||(12139394-12139466)
chr2 (125-212)||(41958560-41958647)
chr2 (164-213)||(40675217-40675266)
chr2 (118-205)||(18667131-18667218)
chr2 (163-213)||(3409888-3409938)
chr2 (147-212)||(39801156-39801221)
chr2 (116-187)||(33164617-33164688)
chr2 (116-161)||(30711472-30711517)
chr2 (116-212)||(29478047-29478143)
chr2 (111-205)||(29804265-29804356)
chr2 (151-193)||(35380393-35380435)
chr2 (118-155)||(34116851-34116888)
chr2 (111-167)||(1093913-1093969)
chr2 (116-212)||(11027291-11027387)
[»] chr6 (13 HSPs)
chr6 (117-205)||(6998581-6998669)
chr6 (116-212)||(7957058-7957154)
chr6 (120-212)||(10346220-10346312)
chr6 (116-205)||(18961849-18961938)
chr6 (117-205)||(4442042-4442130)
chr6 (125-213)||(33109845-33109933)
chr6 (110-213)||(7436698-7436801)
chr6 (139-205)||(22295383-22295449)
chr6 (116-213)||(3082370-3082467)
chr6 (157-212)||(12428088-12428143)
chr6 (144-213)||(13311380-13311449)
chr6 (110-211)||(8291456-8291557)
chr6 (116-161)||(10962513-10962558)
[»] chr1 (29 HSPs)
chr1 (116-211)||(36418524-36418619)
chr1 (111-213)||(29678143-29678245)
chr1 (116-212)||(37441853-37441954)
chr1 (111-213)||(5205149-5205251)
chr1 (116-198)||(47603463-47603545)
chr1 (116-213)||(44595833-44595925)
chr1 (116-204)||(28005739-28005827)
chr1 (116-212)||(32179337-32179433)
chr1 (111-205)||(38061666-38061760)
chr1 (116-187)||(24470579-24470650)
chr1 (116-203)||(35309012-35309099)
chr1 (118-212)||(24575306-24575400)
chr1 (118-211)||(7955655-7955748)
chr1 (151-202)||(13645766-13645817)
chr1 (149-210)||(30211799-30211860)
chr1 (118-211)||(45654408-45654501)
chr1 (116-212)||(43090072-43090163)
chr1 (146-213)||(31868923-31868990)
chr1 (139-213)||(15257885-15257959)
chr1 (116-193)||(45582158-45582235)
chr1 (121-212)||(48575776-48575867)
chr1 (139-213)||(7994773-7994847)
chr1 (118-212)||(21681662-21681756)
chr1 (116-175)||(14579108-14579167)
chr1 (116-175)||(23916135-23916194)
chr1 (116-202)||(7595724-7595810)
chr1 (147-213)||(15305917-15305983)
chr1 (116-202)||(46265656-46265742)
chr1 (152-208)||(18349826-18349882)
[»] scaffold0316 (1 HSPs)
scaffold0316 (111-212)||(18709-18810)
[»] chr8 (12 HSPs)
chr8 (116-213)||(9413303-9413400)
chr8 (121-204)||(11161087-11161170)
chr8 (117-205)||(22930896-22930979)
chr8 (139-203)||(43966909-43966973)
chr8 (131-212)||(22563277-22563358)
chr8 (139-212)||(12377748-12377821)
chr8 (118-206)||(25731900-25731983)
chr8 (110-175)||(27189630-27189695)
chr8 (118-175)||(33280715-33280772)
chr8 (163-205)||(17865721-17865763)
chr8 (110-156)||(34515553-34515599)
chr8 (139-212)||(39477445-39477518)
[»] scaffold0106 (1 HSPs)
scaffold0106 (116-212)||(26497-26593)
[»] scaffold0658 (1 HSPs)
scaffold0658 (116-212)||(6433-6529)
[»] scaffold0043 (1 HSPs)
scaffold0043 (116-202)||(16496-16582)
[»] scaffold0444 (1 HSPs)
scaffold0444 (157-213)||(1452-1508)
[»] scaffold0025 (1 HSPs)
scaffold0025 (179-213)||(4745-4779)


Alignment Details
Target: chr5 (Bit Score: 95; Significance: 1e-46; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 13137422 - 13137312
Alignment:
Q  1 tccttaaaccaatccaaatagattaacaacaaaattgtactttaatcactttcctattttagtataaaactggctatcattatccacaagtcattccaaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  13137422 tccttaaaccaatccaaatggattaacaacaaaattgtactttaatcactttcctattttagtataaaattggctatcactatcctcaagtcattccaaa 13137323  T
Q  101 taacttaagtc 111  Q
    |||||||||||    
T  13137322 taacttaagtc 13137312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 1841113 - 1841016
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||||||||||||| ||||||||| |||||||||||||||| |||| |||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  1841113 gctggaaatgagtcgagtcgaaccaaacctgtctgagctcgactcgactcgataagaattggttcggctcgaaactcgactcgagttcgatacgaacc 1841016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 3805509 - 3805413
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||||| ||||||    
T  3805509 gctggaaatgagtcgagtcgaaccgaacctgtctgagctcggctcgactcgataagaattggttcggctcgaaactcggctcgagttcgacacgaac 3805413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 32157521 - 32157425
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||| |||||||| ||||||||||| |||||||||| |||||| |||||| ||||||||||||||| | ||||||||||| ||||||    
T  32157521 gctggaaatgagtcgagtcgaactgaacctgtctgggctcggctcgactcgataagaattggttcggctcgaaacttggctcgagttcgacacgaac 32157425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 27905484 - 27905580
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||| ||||||||||||| | ||||||||||||||| || ||| |||||| ||||||| ||||||||| ||||||||||| ||||||    
T  27905484 gctggaaatgagtcgagtcgaaccgaacttatctgagctcggctcgacttgataagaattggttcggcacgaaactcggctcgagttcgacacgaac 27905580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 121 - 212
Target Start/End: Original strand, 18879629 - 18879720
Alignment:
Q  121 aaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    ||||||||| |||||||||||| ||||||||| |||||||| |||||| |||||| ||||||||||||||| | ||||||||||| ||||||    
T  18879629 aaatgagtcgagtcgaaccgaatctgtctgagttcggctcgactcgataagaattggttcggctcgaaacttggctcgagttcgacacgaac 18879720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 213
Target Start/End: Complemental strand, 19283726 - 19283623
Alignment:
Q  110 tctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacg 209  Q
    ||||| |||||||||||||| ||| ||| ||||| | |||||||||| |||| |||||| |||||| |||  ||||||||||||||||||||||||||||    
T  19283726 tctagggctggaaatgagtcgagtagaatcgaacttatctgagctcgactcgactcgataagaattggtttagctcgaaactcgactcgagttcgatacg 19283627  T
Q  210 aacc 213  Q
    ||||    
T  19283626 aacc 19283623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 26217429 - 26217524
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||||||||||| ||||||  ||||| ||||||||||||| ||| ||| || |||||| ||||||||||||||||||||||||||| | |||||||    
T  26217429 tggaaatgagtcgagtcgagtcgaacttgtctgagctcggttcgactcaataagaattggttcggctcgaaactcgactcgagttcaaaacgaacc 26217524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 29322067 - 29322138
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcga 187  Q
    |||||||||||||| |||||||||||||||| |||||||||||||| |||||| |||||| |||||||||||    
T  29322067 gctggaaatgagtcgagtcgaaccgaacctgcctgagctcggctcgactcgataagaattggttcggctcga 29322138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 213
Target Start/End: Original strand, 10493378 - 10493475
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacga 210  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||| ||||     || |||| | ||||||||||||||||||||||||||||| ||||    
T  10493378 ctagggctggaaatgagtcgagtcgaatcgaacctgtctgagctcgactcg-----ataagaaatggttcggctcgaaactcgactcgagttcgaaacga 10493472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 34720204 - 34720110
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    |||| |||||||||||||| ||||||  |||||||||| |||||||  ||| |||||| |||||| |||||| ||||||||||||||||||||||    
T  34720204 ctagggctggaaatgagtcgagtcgagtcgaacctgtccgagctcgattcgactcgataagaattggttcggttcgaaactcgactcgagttcga 34720110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 11136799 - 11136702
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||||||||||||| ||||||  ||||| ||||||| |||||||||  ||||| |||||  ||||||||||||||||||||||||||| | |||||||    
T  11136799 gctggaaatgagtcgagtcgagtcgaacttgtctgaactcggctcgattcgataagaataggttcggctcgaaactcgactcgagttcaaaacgaacc 11136702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 27451124 - 27451037
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    |||||||||||| ||||||  | ||||||||||||||||  ||| |||||| |||||| |||||||||||||||| ||||||||||||    
T  27451124 tggaaatgagtcgagtcgagtcaaacctgtctgagctcgattcgactcgataagaattggttcggctcgaaactcaactcgagttcga 27451037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 34724180 - 34724086
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    |||| |||||||||||||| ||||||  |||||||||| |||||||  ||| |||||| |||||| |||| | ||||||||||||||||||||||    
T  34724180 ctagggctggaaatgagtcgagtcgagtcgaacctgtccgagctcgattcgactcgataagaattggttcagttcgaaactcgactcgagttcga 34724086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 5385230 - 5385129
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacga 210  Q
    |||| |||||||||||||| ||||||| ||||| | ||||||||||  |||  ||||||| |||| ||||||||||||||| ||||||||||| | ||||    
T  5385230 ctagggctggaaatgagtcgagtcgaatcgaacttttctgagctcgattcgattcgattaaaatttgttcggctcgaaacttgactcgagttcaacacga 5385131  T
Q  211 ac 212  Q
    ||    
T  5385130 ac 5385129  T

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Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 38523392 - 38523335
Alignment:
Q  110 tctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcga 167  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  38523392 tctagggctggaaatgagtcgagtcgaaccgaacctgtctgagctcggctcgactcga 38523335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 1224568 - 1224664
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||| ||||||||| | ||||| ||||||||||| ||||||||||| ||| || ||| || | ||| ||||||||||||||||||||||| ||||||    
T  1224568 gctgaaaatgagtcgaatcgaatcgaacctgtctaagctcggctcgactcaataagattttgctcgactcgaaactcgactcgagttcgacacgaac 1224664  T

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Target: chr5; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 26299455 - 26299539
Alignment:
Q  121 aaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    ||||||||| ||||||  | ||| ||||||||||||  ||| |||||| |||||| |||||||||||||||||||||||||||||    
T  26299455 aaatgagtcgagtcgagtcaaacttgtctgagctcgattcgactcgataagaattggttcggctcgaaactcgactcgagttcga 26299539  T

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Target: chr5; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 34856951 - 34857039
Alignment:
Q  117 ctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    ||||||||||||| ||||||  |||| ||||||||| |||  ||| |||||| |||||| ||||||||||||||| |||||||||||||    
T  34856951 ctggaaatgagtcgagtcgagtcgaatctgtctgagttcgattcgactcgataagaattggttcggctcgaaacttgactcgagttcga 34857039  T

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Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 200
Target Start/End: Complemental strand, 14501480 - 14501398
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgag 200  Q
    ||||||||||||  |||||  ||||  ||||||||||||||||| |||||| |||||  ||||||||||||||||||||||||    
T  14501480 tggaaatgagtcgcgtcgagtcgaatttgtctgagctcggctcgactcgataagaatcggttcggctcgaaactcgactcgag 14501398  T

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Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 4984077 - 4984004
Alignment:
Q  140 gaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||| ||||||||||||||||| |||||| |||||| |||| ||| |||||||||||||||||| | |||||||    
T  4984077 gaacttgtctgagctcggctcgactcgataagaattggttcagcttgaaactcgactcgagttcaaaacgaacc 4984004  T

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Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 43385802 - 43385891
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    |||||||||| | | ||||||  |||||  |||||||||||||||| |||||| |||||| |||| |||||||||||| |||||||||||    
T  43385802 gctggaaatgtgccgagtcgagtcgaactcgtctgagctcggctcgactcgataagaattggttcagctcgaaactcggctcgagttcga 43385891  T

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Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 28430594 - 28430650
Alignment:
Q  157 gctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    ||||| |||||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  28430594 gctcgactcgataagaattagttcagctcaaaactcgactcgagttcgatacgaacc 28430650  T

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Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 39408749 - 39408812
Alignment:
Q  142 acctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    ||||||| |||||||  ||| |||||| |||||| |||||||||||||||||||||||||||||    
T  39408749 acctgtccgagctcgattcgactcgataagaattggttcggctcgaaactcgactcgagttcga 39408812  T

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Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 19715800 - 19715866
Alignment:
Q  139 cgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    ||||| ||||||||||||  ||| |||||| | |||| |||||||||||||||||||||||||||||    
T  19715800 cgaacttgtctgagctcgattcgactcgataataattggttcggctcgaaactcgactcgagttcga 19715866  T

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Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 27195450 - 27195524
Alignment:
Q  139 cgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    ||||| |||||||||||| |||| ||| || |||||| |||||||||||||||| ||||||||| || |||||||    
T  27195450 cgaacatgtctgagctcgactcgactcaataagaattggttcggctcgaaactctactcgagtttgaaacgaacc 27195524  T

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Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 20188354 - 20188450
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||||||||||| ||||| |||||||| ||| |||| |||  | |||||| |||||| ||||| ||||  ||||||| || ||||||    
T  20188354 gctggaaatgagtcaagtcgaatcgaacttgtctgagttcgactcgactcattaagaatttgttcggttcgaatctcggatcgagtttgacacgaac 20188450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 26297934 - 26297998
Alignment:
Q  141 aacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    ||||||| ||||||||  ||| |||||| |||||| |||||||||||||||||| ||||||||||    
T  26297934 aacctgtgtgagctcgattcgactcgataagaattggttcggctcgaaactcgattcgagttcga 26297998  T

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Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 41782739 - 41782795
Alignment:
Q  157 gctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||||| | ||| |||||| ||||||||||||||||||||||||||| | |||||||    
T  41782739 gctcggtttgataagaattggttcggctcgaaactcgactcgagttcaaaacgaacc 41782795  T

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Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 39407011 - 39407074
Alignment:
Q  142 acctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    ||||||| ||||| |  ||| |||||| |||||| |||||| ||||||||||||||||||||||    
T  39407011 acctgtccgagcttgattcgactcgataagaattggttcggttcgaaactcgactcgagttcga 39407074  T

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Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 22921442 - 22921512
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcg 186  Q
    |||||||||||||| ||||||| ||| |||||||||||||| |||  |||||| | |||| |||| |||||    
T  22921442 gctggaaatgagtcgagtcgaatcgagcctgtctgagctcgactccactcgataaaaattggttctgctcg 22921512  T

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Target: chr7 (Bit Score: 74; Significance: 4e-34; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 26215716 - 26215817
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacga 210  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||||| ||||    
T  26215716 ctagagctggaaatgagtcgagtcgaaccgaacctgcctgagctcggctcgactcgataagaattggttcggctcgaaactcggctcgagttcgacacga 26215815  T
Q  211 ac 212  Q
    ||    
T  26215816 ac 26215817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 36926408 - 36926509
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacga 210  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||||| ||||    
T  36926408 ctagggctggaaatgagtcgagtcgaatcgaacctgtctgagctcggctcgactcgataagaattggttcggctcgaaactcggctcgagttcgacacga 36926507  T
Q  211 ac 212  Q
    ||    
T  36926508 ac 36926509  T

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Target: chr7; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 5776701 - 5776612
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    |||||||||||||| |||||||||||||||| |||||||||||||| |||||| ||||||||||| |||||||||||| |||||||||||    
T  5776701 gctggaaatgagtcgagtcgaaccgaacctgcctgagctcggctcgactcgataagaattagttcagctcgaaactcggctcgagttcga 5776612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 118 - 212
Target Start/End: Complemental strand, 3931483 - 3931389
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||  |||| |||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||||| ||||||    
T  3931483 tggaaatgagttgagtccaaccgaacctgtctgagctcggctcgactcgataagaattggttcggctcgaaactcggctcgagttcgacacgaac 3931389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 118 - 212
Target Start/End: Original strand, 37333703 - 37333797
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||| |||||||||||||||| ||||||| |||||| |||||| |||||| ||||||||||||||||| ||||||||||||| ||||    
T  37333703 tggaaatgagtcgagtcgaaccgaacctgcctgagcttggctcgactcgataagaattggttcggctcgaaactcggctcgagttcgatatgaac 37333797  T

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Target: chr7; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 666351 - 666263
Alignment:
Q  117 ctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| | |||||| |||||| ||||||||||||||||| |||||||||||    
T  666351 ctggaaatgagtcgagtcgaaccgaacatgtctgagctcggcttgactcgataagaattggttcggctcgaaactcggctcgagttcga 666263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 43052286 - 43052382
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    ||||||||| |||| |||||||||||||||| |||||||||||||| |||||| |||||| ||||||||||||||| | ||||||||||| ||||||    
T  43052286 gctggaaatcagtcgagtcgaaccgaacctgcctgagctcggctcgactcgataagaattggttcggctcgaaacttggctcgagttcgacacgaac 43052382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 7443835 - 7443922
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    |||||||||||| |||||||||||| |||||||||||||||||| |||||| |||||| |||||| |||||||||| |||||||||||    
T  7443835 tggaaatgagtcgagtcgaaccgaatctgtctgagctcggctcgactcgataagaattggttcggttcgaaactcggctcgagttcga 7443922  T

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Target: chr7; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 42071524 - 42071620
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||| ||||||||| ||||||||| ||| ||||||||||||||||| ||| || |||||| ||||||||||||||||| ||||||||||| ||||||    
T  42071524 gctgaaaatgagtcgagtcgaaccaaacatgtctgagctcggctcgactcaataagaattggttcggctcgaaactcggctcgagttcgacacgaac 42071620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 17026133 - 17026039
Alignment:
Q  117 ctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaa 211  Q
    ||||||||||||| ||||||  ||||| |||||||||||| |||| |||||| |||||| |||||||||||||||||||||||||| || |||||    
T  17026133 ctggaaatgagtcgagtcgagtcgaacttgtctgagctcgactcgactcgataagaattggttcggctcgaaactcgactcgagtttgaaacgaa 17026039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 212
Target Start/End: Complemental strand, 223077 - 222983
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||  ||||| | |||||||||||||||| |||||| |||||| | |||| | ||||||||||||||||||||||||||| ||||||    
T  223077 tggaaatgagttgagtcggatcgaacctgtctgagcttggctcgactcgataaaaatttgctcggctcgaaactcgactcgagttcgacacgaac 222983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 45174641 - 45174712
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcga 187  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||| ||| || |||||| |||||||||||    
T  45174641 gctgaaaatgagtcgagtcgaaccgaacctgtctgagctcggctcgactcaataagaattggttcggctcga 45174712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 5795629 - 5795559
Alignment:
Q  117 ctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcga 187  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||| |||||| |||||| |||||||||||    
T  5795629 ctggaaatgagtcgagtcgaatcgaacctgcctgagctcggctcgactcgataagaattggttcggctcga 5795559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 49035201 - 49035105
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||| | ||||| | ||| ||||||||||||||||| || ||| ||| || | |||||||||||||||||||||||| || ||||||    
T  49035201 gctggaaatgagtcgaatcgaatcaaacatgtctgagctcggctcgacttgataagattttgctcggctcgaaactcgactcgagtttgacacgaac 49035105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 388431 - 388502
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcga 187  Q
    |||||||||||||| ||||||||||||| || |||||||||| ||| |||||| |||||| |||||||||||    
T  388431 gctggaaatgagtcgagtcgaaccgaacttgcctgagctcggttcgactcgataagaattggttcggctcga 388502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 116 - 187
Target Start/End: Original strand, 15433633 - 15433704
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcga 187  Q
    |||||||||||||| ||||||||| |||||| |||||||||||| | |||||| |||||| |||||||||||    
T  15433633 gctggaaatgagtcgagtcgaaccaaacctgcctgagctcggcttgactcgataagaattggttcggctcga 15433704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 45054820 - 45054894
Alignment:
Q  139 cgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    ||||| |||||||||| |||||| |||||| |||||| |||||||| |||||||||||||||||| | |||||||    
T  45054820 cgaacttgtctgagcttggctcgactcgataagaattggttcggcttgaaactcgactcgagttcaaaacgaacc 45054894  T

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Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 7539787 - 7539698
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    |||||||||||| | ||| ||  |||||  |||||||||||||||| |||||| |||||| |||| |||||||||||| |||||||||||    
T  7539787 gctggaaatgagccgagttgagtcgaactcgtctgagctcggctcgactcgataagaattggttcagctcgaaactcggctcgagttcga 7539698  T

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Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 30918934 - 30919031
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    ||||||||||| || ||||||||||||||| |||||||||| |||  |||||| |||||| |||| ||||||||||| | ||| | |||| |||||||    
T  30918934 gctggaaatgaatcgagtcgaaccgaacctatctgagctcgactcaactcgataagaattggttcagctcgaaactcaaatcgtgatcgaaacgaacc 30919031  T

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Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 22074612 - 22074661
Alignment:
Q  163 ctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| ||||    
T  22074612 ctcgataagaattggttcggctcgaaactcgactcgagttcgatatgaac 22074661  T

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Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 37106144 - 37106209
Alignment:
Q  110 tctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaatt 175  Q
    |||||||||||||||||||| ||||||| |||||||||||||| ||| |||| |||| | ||||||    
T  37106144 tctagagctggaaatgagtcgagtcgaatcgaacctgtctgagttcgactcgactcgttaagaatt 37106209  T

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Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 18250749 - 18250685
Alignment:
Q  149 tgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||||||| |||| |||||| |||||| ||||||||||||||| |||||||||| || |||||||    
T  18250749 tgagctcgactcgactcgataagaattggttcggctcgaaacttgactcgagtttgaaacgaacc 18250685  T

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Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 28950429 - 28950359
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcga 187  Q
    |||||||||||||| ||||||||| ||| || |||||||||||||  |||||| |||||| |||||||||||    
T  28950429 gctggaaatgagtcgagtcgaaccaaac-tgcctgagctcggctcaactcgataagaattggttcggctcga 28950359  T

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Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 42012318 - 42012255
Alignment:
Q  112 tagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaatt 175  Q
    |||||||||||||||||| ||||||| ||||| |||||||||||| |||| |||| | ||||||    
T  42012318 tagagctggaaatgagtcgagtcgaatcgaacttgtctgagctcgactcgactcgttaagaatt 42012255  T

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Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 23236910 - 23236821
Alignment:
Q  119 ggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    ||||||||||| |||||||||||||   |||||||||| ||||     || |||||||| ||||||||||||||||||| | ||| |||||||||    
T  23236910 ggaaatgagtcgagtcgaaccgaactcatctgagctcgactcg-----ataagaattagctcggctcgaaactcgactcaaattcaatacgaacc 23236821  T

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Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 20260036 - 20259970
Alignment:
Q  146 gtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    ||||||||||| |||| |||||| |||||| |||| |||  ||||||| ||||||||||| ||||||    
T  20260036 gtctgagctcgactcgactcgataagaattggttcagcttaaaactcggctcgagttcgacacgaac 20259970  T

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Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 35544275 - 35544226
Alignment:
Q  145 tgtctgagctcggctcggctcgattagaattagttcggctcgaaactcga 194  Q
    ||||||||||||  ||| |||||| |||||| ||||||||||||||||||    
T  35544275 tgtctgagctcgattcgactcgataagaattggttcggctcgaaactcga 35544226  T

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Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 8390245 - 8390177
Alignment:
Q  145 tgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||||||||||| |||| |||||| |||||  | || ||||||||||| |||||| |||||||| ||||    
T  8390245 tgtctgagctcgactcgactcgataagaatcggctcagctcgaaactcaactcgaattcgatacaaacc 8390177  T

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Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 27232519 - 27232479
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcg 156  Q
    |||||||||||||| ||||||| |||| |||||||||||||    
T  27232519 gctggaaatgagtcgagtcgaatcgaatctgtctgagctcg 27232479  T

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Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 41449192 - 41449248
Alignment:
Q  157 gctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    ||||| |||||| |||||| | ||||||||||| ||||||||| |||||||| ||||    
T  41449192 gctcgactcgataagaattggctcggctcgaaattcgactcgaattcgatacaaacc 41449248  T

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Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 50605462 - 50605555
Alignment:
Q  119 ggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||||| ||||||    
T  50605462 ggaaatgagtcgagtcgaaccgaacctgtctgagctcggctcgactcgataagaattggttcggctcgaaactcggctcgagttcgacacgaac 50605555  T

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Target: chr4; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 19850136 - 19850232
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||| |  ||| ||||||||||||||||| ||||||||||| ||||||    
T  19850136 gctggaaatgagtcgagtcgaaccgaacctgtctgagctcggctcgactcgataaacattggttcggctcgaaactcggctcgagttcgacacgaac 19850232  T

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Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 49820383 - 49820478
Alignment:
Q  117 ctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||| || ||||||| |||||||| |||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  49820383 ctggaaatgaatcgagtcgaatcgaacctgcctgagctcggctcgactcgataagaattggttcggctcgaaactcgactcgagttcgacacgaac 49820478  T

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Target: chr4; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 9469432 - 9469527
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||| |||||| | |||||||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||||| ||||||    
T  9469432 gctggaaatgagtcgagtcgatc-gaacctgtctgagctcggctcgactcgataagaattggttcggctcgaaactcggctcgagttcgacacgaac 9469527  T

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Target: chr4; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 43386538 - 43386634
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||| |||||||| ||||||||||||||||| |||| |||||| |||||| | |||||| |||||||||||||||||||| ||||||    
T  43386538 gctggaaatgagtcgagtcgaactgaacctgtctgagctcgactcgactcgataagaatttgctcggcttgaaactcgactcgagttcgacacgaac 43386634  T

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Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 48977008 - 48977104
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||| |||||||||||| ||| |||| |||||||||  ||||| |||||| ||||||||||||||||| ||||||||||| ||||||    
T  48977008 gctggaaatgagtcgagtcgaaccgaatctgcctgaactcggctcgattcgataagaattggttcggctcgaaactcggctcgagttcgacacgaac 48977104  T

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Target: chr4; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 21436313 - 21436400
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    |||||||||||| |||||||||||||||||||||| |||||||| |||||| ||||||  |||||||||||||||| ||||| |||||    
T  21436313 tggaaatgagtcgagtcgaaccgaacctgtctgagttcggctcgactcgataagaattgattcggctcgaaactcggctcgaattcga 21436400  T

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Target: chr4; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 53369059 - 53369162
Alignment:
Q  109 gtctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatac 208  Q
    |||||| | |||||||||||| |||||||||||| ||| ||||| |||||||  |||||| |||||| ||||||||||||||||| ||||||||||| ||    
T  53369059 gtctagggttggaaatgagtcgagtcgaaccgaatctgcctgagttcggctcaactcgataagaattggttcggctcgaaactcggctcgagttcgacac 53369158  T
Q  209 gaac 212  Q
    ||||    
T  53369159 gaac 53369162  T

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Target: chr4; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 52705597 - 52705683
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagtt 202  Q
    |||||||||||||| ||||||  ||||| ||||||||||||||||| |||||| |||||| |||||||||||||||||| |||||||    
T  52705597 gctggaaatgagtcgagtcgagtcgaacttgtctgagctcggctcgactcgataagaattggttcggctcgaaactcgattcgagtt 52705683  T

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Target: chr4; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 116 - 201
Target Start/End: Original strand, 7505428 - 7505513
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagt 201  Q
    |||||||||||||| ||||||  ||||| ||||||||||||||||| |||||| ||||||  ||||||||||||||||||||||||    
T  7505428 gctggaaatgagtcgagtcgagtcgaacttgtctgagctcggctcgactcgataagaattgattcggctcgaaactcgactcgagt 7505513  T

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Target: chr4; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 22183762 - 22183863
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacga 210  Q
    |||| ||| ||||||| || ||||||||||||||||||||||||||| ||| || ||| |||||| | ||||||| ||||||||||||||||||| ||||    
T  22183762 ctagggctagaaatgaatcgagtcgaaccgaacctgtctgagctcggatcgacttgataagaatttgctcggctcaaaactcgactcgagttcgacacga 22183861  T
Q  211 ac 212  Q
    ||    
T  22183862 ac 22183863  T

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Target: chr4; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 44792922 - 44792846
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcga 187  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||| |||||||||||    
T  44792922 ctagggctggaaatgagtcgagtcgaaccgaacctgtatgagctcggctcgactcgataagaattggttcggctcga 44792846  T

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Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 51994082 - 51994176
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    |||| |||||||||||||| ||||||| |||| | ||||||||||| |||| |||| | |||||| |||| ||||||||||||||||||||||||    
T  51994082 ctagggctggaaatgagtcgagtcgaatcgaatccgtctgagctcgactcgactcgttaagaattggttcagctcgaaactcgactcgagttcga 51994176  T

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Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 52812976 - 52813054
Alignment:
Q  121 aaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcga 199  Q
    ||||||||| |||||||||||||||||||||| |||||||| |||||| |||||| | |||||| ||||||||||||||    
T  52812976 aaatgagtcgagtcgaaccgaacctgtctgagttcggctcgactcgataagaatttgctcggcttgaaactcgactcga 52813054  T

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Target: chr4; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 79764 - 79860
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||| | ||||| ||||||||||| || |||||||| |||||| ||| || | |||| |||||||||||||||||||||| ||||||    
T  79764 gctggaaatgagtcgaatcgaatcgaacctgtctaagttcggctcgactcgataagattttgctcggttcgaaactcgactcgagttcgacacgaac 79860  T

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Target: chr4; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 25133937 - 25134033
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||| ||||||  |||| ||||||||||||| |||| |||||| |||||| |||||||||||||| ||  |||||||||| ||||||    
T  25133937 gctggaaatgagtcgagtcgagtcgaatctgtctgagctcgactcgactcgataagaattggttcggctcgaaacccggttcgagttcgaaacgaac 25134033  T

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Target: chr4; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 45674310 - 45674376
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggct 184  Q
    |||||||||||| |||||||||||||||| |||||||||||||| |||||| |||||| ||||||||    
T  45674310 tggaaatgagtcgagtcgaaccgaacctgcctgagctcggctcgactcgataagaattggttcggct 45674376  T

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Target: chr4; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 51409236 - 51409154
Alignment:
Q  130 aagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||  ||||| |||||||||||| |||| |||||| |||||| |||||||||||||||||| |||||||||| ||||||    
T  51409236 aagtcgagtcgaacttgtctgagctcgactcgactcgataagaatttgttcggctcgaaactcgattcgagttcgacacgaac 51409154  T

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Target: chr4; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 12673799 - 12673707
Alignment:
Q  121 aaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    ||||||||| ||||||  |||||||||||||||||| |||  |||  | |||| |||||||||||||||||||||||||||| || |||||||    
T  12673799 aaatgagtcgagtcgagtcgaacctgtctgagctcgactcaactctttaagaaatagttcggctcgaaactcgactcgagtttgaaacgaacc 12673707  T

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Target: chr4; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 204
Target Start/End: Original strand, 22720748 - 22720836
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcg 204  Q
    ||||||||||| || ||||||| |||||  |||||||||||||||  |||||| |||||| ||||||||||||||||||  ||||||||    
T  22720748 gctggaaatgaatcgagtcgaatcgaactagtctgagctcggctcaactcgataagaattggttcggctcgaaactcgatacgagttcg 22720836  T

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Target: chr4; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 12790282 - 12790211
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcga 187  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||  ||||| |||||| | |||||||||    
T  12790282 gctgaaaatgagtcgagtcgaaccgaacctgtctgagctcggctcgattcgataagaattggctcggctcga 12790211  T

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Target: chr4; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 202
Target Start/End: Complemental strand, 46945288 - 46945225
Alignment:
Q  139 cgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagtt 202  Q
    |||||||||||||||||| |||  |||||| |||||| ||||||||||||||||||||||||||    
T  46945288 cgaacctgtctgagctcgactcaactcgataagaattggttcggctcgaaactcgactcgagtt 46945225  T

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Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 203
Target Start/End: Original strand, 40797160 - 40797245
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttc 203  Q
    |||||||||||| ||||||  |||| ||||||||||||| |||| |||||| |||||| ||||||||||||||  | |||||||||    
T  40797160 tggaaatgagtcgagtcgagtcgaatctgtctgagctcgactcgactcgataagaattggttcggctcgaaacatggctcgagttc 40797245  T

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Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 205
Target Start/End: Complemental strand, 4275676 - 4275589
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    |||||||||| | ||||||  |||| ||| ||||||||| |||| |||||| |||||| |||| |||||||||||| |||||||||||    
T  4275676 tggaaatgagccgagtcgagtcgaatctgcctgagctcgactcgactcgataagaattggttcagctcgaaactcggctcgagttcga 4275589  T

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Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 49378225 - 49378183
Alignment:
Q  119 ggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcg 161  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  49378225 ggaaatgagtcgagtcgaaccgaacctgtctgagctcggctcg 49378183  T

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Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 38493737 - 38493652
Alignment:
Q  119 ggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcg 204  Q
    ||||||||||| ||||||| |||||  ||||||| ||| |||| | |||| |||||||| |||||| ||||||||| |||||||||    
T  38493737 ggaaatgagtctagtcgaatcgaactcgtctgagttcgactcgacccgataagaattagatcggcttgaaactcgaatcgagttcg 38493652  T

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Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 44377650 - 44377706
Alignment:
Q  157 gctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    ||||| |||||| |||||| |||||||||||||||||||||||||| || |||||||    
T  44377650 gctcgactcgataagaattggttcggctcgaaactcgactcgagtttgaaacgaacc 44377706  T

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Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 55892812 - 55892736
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcga 187  Q
    |||| |||||||||||||| ||||||| |||| || |||||||||| |||| |||||| |||||| | |||||||||    
T  55892812 ctagggctggaaatgagtcgagtcgaatcgaatctatctgagctcgactcgactcgataagaatttgctcggctcga 55892736  T

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Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 170 - 212
Target Start/End: Complemental strand, 5769838 - 5769796
Alignment:
Q  170 agaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  5769838 agaaatagttcggctcgaaactcgactcgaattcgatacgaac 5769796  T

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Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 5765324 - 5765251
Alignment:
Q  139 cgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    ||||| |||||||||||| |||  |||  | |||| ||||||||||||||||||||||||| ||||||| ||||    
T  5765324 cgaacttgtctgagctcgactcaactctttaagaaatagttcggctcgaaactcgactcgaattcgatatgaac 5765251  T

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Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 5767568 - 5767495
Alignment:
Q  139 cgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    ||||| |||||||||||| |||  |||  | |||| ||||||||||||||||||||||||| ||||||| ||||    
T  5767568 cgaacttgtctgagctcgactcaactctttaagaaatagttcggctcgaaactcgactcgaattcgatatgaac 5767495  T

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Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 16743214 - 16743158
Alignment:
Q  157 gctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    ||||| |||||| |||||| ||||||||||||||||||||| |||| | ||||||||    
T  16743214 gctcgactcgataagaattggttcggctcgaaactcgactcaagtttgttacgaacc 16743158  T

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Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 28266875 - 28266784
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||| ||||||||| |||||||  |||| |||||||||||| || |     || |||||| | ||||||||||||||||||||||||||| ||||||    
T  28266875 gctgaaaatgagtcgagtcgaattgaacatgtctgagctcgactgg-----ataagaatttgctcggctcgaaactcgactcgagttcgacacgaac 28266784  T

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Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 36543313 - 36543369
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcga 167  Q
    |||| ||| |||||||||| ||||||||||||| | ||||||||||||||| |||||    
T  36543313 ctagggctagaaatgagtcgagtcgaaccgaacgtatctgagctcggctcgactcga 36543369  T

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Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 52813045 - 52813099
Alignment:
Q  158 ctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||| |||||| |||||| | |||||| |||||||||||||||||||| ||||||    
T  52813045 ctcgactcgataagaatttgctcggcttgaaactcgactcgagttcgacacgaac 52813099  T

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Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 205
Target Start/End: Complemental strand, 50241030 - 50240941
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    |||||||||||| | |||| || |||||   |||||||||| |||| |||| | | |||| |||| ||||||||||| ||||||||||||    
T  50241030 gctggaaatgagccgagtcaaatcgaacgcatctgagctcgactcgactcgttaaaaattggttcagctcgaaactctactcgagttcga 50240941  T

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Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 39471220 - 39471119
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacga 210  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||||||| |||||| |||||| ||||||||||||||||| ||||||||||| ||||    
T  39471220 ctagggctggaaatgagtcgagtcgaaccgaacctgtctgaactcggctcgactcgataagaattggttcggctcgaaactcggctcgagttcgacacga 39471121  T
Q  211 ac 212  Q
    ||    
T  39471120 ac 39471119  T

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Target: chr3; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 52198775 - 52198876
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacga 210  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||  ||||  | ||||||||||||||||||||||||||| ||||    
T  52198775 ctagggctggaaatgagtcgagtcgaaccgaacctgtctgagctcggctcgactcgatatgaatctgctcggctcgaaactcgactcgagttcgacacga 52198874  T
Q  211 ac 212  Q
    ||    
T  52198875 ac 52198876  T

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Target: chr3; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 38644360 - 38644264
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||  ||||||||||||||||||||||||||||||| || ||| |||||| ||||||||| ||||||||||||||||||| ||||||    
T  38644360 gctggaaatgagtggagtcgaaccgaacctgtctgagctcggctcgactagataagaatttgttcggctcaaaactcgactcgagttcgacacgaac 38644264  T

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Target: chr3; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 5418047 - 5418144
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||||||||||||| ||||||  ||||| |||||||| |||||| | |||||| |||||| ||||||||||||||||||||||||||| | |||||||    
T  5418047 gctggaaatgagtcgagtcgagtcgaacttgtctgagttcggcttgactcgataagaattggttcggctcgaaactcgactcgagttcaaaacgaacc 5418144  T

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Target: chr3; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 39133782 - 39133871
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    |||| |||||| || |||||||| |||||||||||||||| ||||| |||||| |||||| ||||||||||||||||| |||||||||||    
T  39133782 gctgaaaatgattcgagtcgaactgaacctgtctgagctcagctcgactcgataagaattggttcggctcgaaactcggctcgagttcga 39133871  T

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Target: chr3; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 120 - 212
Target Start/End: Original strand, 25252882 - 25252974
Alignment:
Q  120 gaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||| ||||||  |||||||||||||||||  |||| |||||| |||||| ||||||||| ||||||||||||||||| ||||||||    
T  25252882 gaaatgagtcgagtcgagtcgaacctgtctgagctcaactcgactcgataagaattggttcggctcaaaactcgactcgagttcaatacgaac 25252974  T

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Target: chr3; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 33895925 - 33896017
Alignment:
Q  121 aaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||| || |||| | |||| |||| ||||||||||||||||||| |||||||    
T  33895925 aaatgagtcaagtcgaaccgaacttgtctgagctcgactcgactcaataagaaatggttcagctccaaactcgactcgagttcgacacgaacc 33896017  T

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Target: chr3; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 121 - 212
Target Start/End: Complemental strand, 20407881 - 20407790
Alignment:
Q  121 aaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    ||||||||| ||||||  | ||| ||| ||||||||||||| |||||| || ||| ||||||||||||||||||||||||||||||||||||    
T  20407881 aaatgagtcgagtcgagtccaacgtgtttgagctcggctcgactcgataagtattggttcggctcgaaactcgactcgagttcgatacgaac 20407790  T

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Target: chr3; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 30740736 - 30740833
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||||||||||||| ||||||||||||| ||||||||||   || | |||||| |||| | ||| ||||||||||||||||||||||||| |||||||    
T  30740736 gctggaaatgagtcgagtcgaaccgaacttgtctgagctttacttgactcgataagaaatggtttggctcgaaactcgactcgagttcgacacgaacc 30740833  T

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Target: chr3; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 41609313 - 41609389
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcga 187  Q
    |||| |||||||||||||| |||||||||||||||| |||||||||||||| |||||| |||||| ||||| |||||    
T  41609313 ctagggctggaaatgagtcgagtcgaaccgaacctgcctgagctcggctcgactcgataagaattggttcgactcga 41609389  T

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Target: chr3; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 202
Target Start/End: Original strand, 32688567 - 32688649
Alignment:
Q  120 gaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagtt 202  Q
    |||||||||| ||| |||||||| |||||||||||||||||| |||||| | |||| ||||||||||||||||  ||||||||    
T  32688567 gaaatgagtcgagttgaaccgaatctgtctgagctcggctcgactcgataaaaattggttcggctcgaaactcagctcgagtt 32688649  T

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Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 27040685 - 27040593
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttc 203  Q
    |||| |||||||||||||| ||||||  ||||| ||| |||||||  |||| |||| | ||| || |||||||||||||||||||||||||||    
T  27040685 ctagggctggaaatgagtcgagtcgagtcgaacttgtttgagctcaactcgactcgttaagatttggttcggctcgaaactcgactcgagttc 27040593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 39943838 - 39943772
Alignment:
Q  146 gtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||||| |||||| |||||| |||| |||||||||||| |||||||| || ||||||    
T  39943838 gtctgagctcggctcgactcgataagaattggttcagctcgaaactcggctcgagtttgacacgaac 39943772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 52934261 - 52934327
Alignment:
Q  147 tctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||||||||| |||| |||||| ||||||   |||||||||||||||||| ||||||||||||||||    
T  52934261 tctgagctcgactcgactcgataagaattgactcggctcgaaactcgacttgagttcgatacgaacc 52934327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 9505972 - 9505880
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||| |||||| || ||||||||||||||||||||| |||| ||||     || ||||||  ||||||||||||||| ||||||||||||||| ||||    
T  9505972 gctgaaaatgaatcgagtcgaaccgaacctgtctgaactcgactcg-----ataagaattgattcggctcgaaactcaactcgagttcgatacaaacc 9505880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 23207041 - 23206992
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctc 160  Q
    |||| |||| ||||||||| ||||||||||||||||||||||||||||||    
T  23207041 ctagggctgaaaatgagtcgagtcgaaccgaacctgtctgagctcggctc 23206992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 46294373 - 46294289
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgag 200  Q
    |||||||||||||| ||||||  |||||  |||||||||||||||| | | || |||||| |||| | |||||||||||||||||    
T  46294373 gctggaaatgagtcgagtcgagtcgaactcgtctgagctcggctcgacgcaataagaattggttcagttcgaaactcgactcgag 46294289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 7029139 - 7029234
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaa 211  Q
    |||||||||||||| |||| |  |||||   |||||| ||| |||| |||||| |||||| |||| |||||||||||| ||||||||||| |||||    
T  7029139 gctggaaatgagtcgagtccagtcgaactcatctgagttcgactcgactcgataagaatttgttcagctcgaaactcggctcgagttcgacacgaa 7029234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 211
Target Start/End: Complemental strand, 7521866 - 7521781
Alignment:
Q  121 aaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaa 211  Q
    ||||||||| ||||||||||||| | |||||||| | ||||     || | |||| ||||||||||||||||||||||||||||| |||||    
T  7521866 aaatgagtcgagtcgaaccgaacttatctgagctagactcg-----ataaaaattcgttcggctcgaaactcgactcgagttcgaaacgaa 7521781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 40942922 - 40942996
Alignment:
Q  139 cgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||| ||||||||||||| |||  |||||| |||||| ||||| ||||||||||| ||||||||| | |||||||    
T  40942922 cgaatctgtctgagctcgactcaactcgataagaattggttcgactcgaaactcggctcgagttcaaaacgaacc 40942996  T

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Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 12710096 - 12710160
Alignment:
Q  148 ctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    ||||||||| |||| |||||| |||||| || ||||||||||||||||||||||| || |||||||    
T  12710096 ctgagctcgactcgactcgataagaattggt-cggctcgaaactcgactcgagtttgaaacgaacc 12710160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 51067744 - 51067788
Alignment:
Q  164 tcgattagaattagttcggctcgaaactcgactcgagttcgatac 208  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||    
T  51067744 tcgataagaattagttcggctcgaaactcaactcgacttcgatac 51067788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 54433015 - 54432944
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcga 187  Q
    |||||||||||||| |||| |  ||||  |||||||||||| |||| |||||| |||||| |||||||||||    
T  54433015 gctggaaatgagtcgagtcaagtcgaatatgtctgagctcgactcgactcgataagaattggttcggctcga 54432944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 202
Target Start/End: Complemental strand, 30662875 - 30662813
Alignment:
Q  140 gaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagtt 202  Q
    |||||||||||||||||  ||| |||||| ||||||  ||||| ||||||||| |||||||||    
T  30662875 gaacctgtctgagctcgattcgactcgataagaattgattcggttcgaaactcaactcgagtt 30662813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 15823275 - 15823227
Alignment:
Q  157 gctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    |||||||||||| | | || | |||||||||||||||||||||||||||    
T  15823275 gctcggctcgataaaattttgctcggctcgaaactcgactcgagttcga 15823227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 53530297 - 53530233
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaatt 175  Q
    |||| |||||||||||||| | ||||| ||||| |||||||||||| |||| |||| | ||||||    
T  53530297 ctagggctggaaatgagtcgaatcgaatcgaacatgtctgagctcgactcgactcgttaagaatt 53530233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 36538076 - 36538177
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacga 210  Q
    |||| |||||||||||||| |||||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||||| ||||    
T  36538076 ctagggctggaaatgagtcgagtcgaactgaacctgtctgagctcggctcgactcgataagaattggttcggctcgaaactcggctcgagttcgacacga 36538175  T
Q  211 ac 212  Q
    ||    
T  36538176 ac 36538177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 20986069 - 20986164
Alignment:
Q  117 ctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||| || |||||||| ||||||    
T  20986069 ctggaaatgagtcgagtcgaaccgaacctgtctgagctcggctcgactcgataagaattggttcggctcgaaactcggcttgagttcgacacgaac 20986164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 118 - 212
Target Start/End: Complemental strand, 44741430 - 44741336
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||  ||| ||||||||||||||||||||||||||| || ||| |||||| | ||||||||||||||||||||||||||| ||||||    
T  44741430 tggaaatgagttgagttgaaccgaacctgtctgagctcggctcgacttgataagaatttgctcggctcgaaactcgactcgagttcgacacgaac 44741336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 27633141 - 27633233
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttc 203  Q
    |||| |||||||||||||| |||||||||||||||| |||||||||||||| || ||| |||||| ||||||||||||||||| ||| |||||    
T  27633141 ctagggctggaaatgagtcgagtcgaaccgaacctgcctgagctcggctcgacttgataagaattggttcggctcgaaactcggctcaagttc 27633233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 33830896 - 33830965
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcga 187  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||    
T  33830896 tggaaatgagtcgagtcgaaccgaacctgtctgagctcggctcgactcgataagaattggttcggctcga 33830965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 2647736 - 2647649
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttc 203  Q
    |||||||||||||| ||||||  ||||  ||||||| ||||||||| |||||| |||||| |||||||||||||||||||||||||||    
T  2647736 gctggaaatgagtcgagtcgagtcgaatttgtctgaactcggctcgactcgataagaattggttcggctcgaaactcgactcgagttc 2647649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 26435771 - 26435866
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaa 211  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||  ||||| |||||| |||||| ||||||||||  |||||||||| |||||    
T  26435771 gctgaaaatgagtcgagtcgaaccgaatctgtctgagctcggctcgattcgataagaattggttcggttcgaaactcggttcgagttcgacacgaa 26435866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 12139394 - 12139466
Alignment:
Q  140 gaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||||||| ||| |||||| |||||| ||||||||||||||||| ||||||||||| ||||||    
T  12139394 gaacctgtctgagctcggttcgactcgataagaattggttcggctcgaaactcggctcgagttcgacacgaac 12139466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 125 - 212
Target Start/End: Original strand, 41958560 - 41958647
Alignment:
Q  125 gagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    ||||| ||| |||||||||||| | |||||||| ||| |||||| | |||| ||||||||||||||||| ||||||||||| ||||||    
T  41958560 gagtcgagttgaaccgaacctgcccgagctcggttcgactcgataaaaattggttcggctcgaaactcggctcgagttcgacacgaac 41958647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 40675217 - 40675266
Alignment:
Q  164 tcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  40675217 tcgataagaattggttcggctcgaaactcgactcgagttcgatacgaacc 40675266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 118 - 205
Target Start/End: Original strand, 18667131 - 18667218
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    ||||||||| || ||||||| |||||  ||||||||| |||||| |||||| |||||   |||||||||||||| |||||||||||||    
T  18667131 tggaaatgaatcgagtcgaatcgaactcgtctgagcttggctcgactcgataagaatagcttcggctcgaaacttgactcgagttcga 18667218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 3409938 - 3409888
Alignment:
Q  163 ctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  3409938 ctcgataagaattagctcggcttgaaactcgactcgagttcgatacgaacc 3409888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 39801156 - 39801221
Alignment:
Q  147 tctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    ||||||||||||||| |||||  ||||||||||| |||||||| ||| ||||||||||| ||||||    
T  39801156 tctgagctcggctcgactcgagaagaattagttcagctcgaaattcggctcgagttcgacacgaac 39801221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 33164688 - 33164617
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcga 187  Q
    |||||||||||||| |||||||||||| ||||||||  | |||||| |||||| | |||| |||||||||||    
T  33164688 gctggaaatgagtcgagtcgaaccgaatctgtctgaatttggctcgactcgataaaaattggttcggctcga 33164617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 30711472 - 30711517
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcg 161  Q
    |||||||||||||||||| ||| |||||||||||||||||| ||||    
T  30711472 gctggaaatgagtcaagttgaatcgaacctgtctgagctcgactcg 30711517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 29478047 - 29478143
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||| | |||| | ||||||  |||||||||| | ||| ||| || ||| || ||||||||| |||||||||| || ||||||||||||    
T  29478047 gctggaaatgagacgagtcaagccgaactcgtctgagctcagttcgactcaataagatttggttcggctcaaaactcgacttgatttcgatacgaac 29478143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 205
Target Start/End: Original strand, 29804265 - 29804356
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    |||| ||||||||||||   ||| ||||||||||| | |||||| | || | |||||| | |||| ||||||||||||||||||||| |||||||    
T  29804265 ctagggctggaaatgag---agttgaaccgaacctatttgagcttgacttgactcgataaaaattggttcggctcgaaactcgactcaagttcga 29804356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 35380393 - 35380435
Alignment:
Q  151 agctcggctcggctcgattagaattagttcggctcgaaactcg 193  Q
    ||||||||||| |||||| |||||||| |||||||||||||||    
T  35380393 agctcggctcgactcgataagaattagatcggctcgaaactcg 35380435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 118 - 155
Target Start/End: Complemental strand, 34116888 - 34116851
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctc 155  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  34116888 tggaaatgagtcgagtcgaatcgaacctgtctgagctc 34116851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 1093913 - 1093969
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcga 167  Q
    |||| |||||||||||||| ||||||  |||||||||||||| ||| |||| |||||    
T  1093913 ctagggctggaaatgagtcgagtcgagtcgaacctgtctgagttcgactcgactcga 1093969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 11027291 - 11027387
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||| ||||||| ||||| |||||||| ||| |||  |||  | |||||| |||||| ||||| ||||  ||||||| || ||||||    
T  11027291 gctggaaatgagtcgagtcgaatcgaacttgtctgagttcgactcaactcattaagaatttgttcggttcgaacctcggatcgagtttgacacgaac 11027387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 4e-31; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 117 - 205
Target Start/End: Original strand, 6998581 - 6998669
Alignment:
Q  117 ctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||| | |||||||||||||||||||||||||||    
T  6998581 ctggaaatgagtcgagtcgaaccgaacctgtctgagctcggctcgactcgataagaatttgctcggctcgaaactcgactcgagttcga 6998669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 7957058 - 7957154
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||| | ||||||    
T  7957058 gctggaaatgagtcgagtcgacccgaacctgtctgagctcggctcgactcgataagaattggttcggctcgaaactcggctcgagttcaacacgaac 7957154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 120 - 212
Target Start/End: Original strand, 10346220 - 10346312
Alignment:
Q  120 gaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||||||||||||||||| |||||||||||||  ||||| |||||| ||||||||||||||||| ||||||||||| ||||||    
T  10346220 gaaatgagtcaagtcgaaccgaacctgtttgagctcggctcgattcgataagaattggttcggctcgaaactcggctcgagttcgacacgaac 10346312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 18961849 - 18961938
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    |||||||||||||| |||| || |||||||| |||||||||||||| |||||| |||||| ||||||||||||||||| |||||||||||    
T  18961849 gctggaaatgagtcgagtcaaatcgaacctgcctgagctcggctcgactcgataagaattggttcggctcgaaactcggctcgagttcga 18961938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 4442130 - 4442042
Alignment:
Q  117 ctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    ||||||||||||| |||||||||||||||||||||||||  |||| |||||| ||||||| ||||||||||||||| |||| |||||||    
T  4442130 ctggaaatgagtcgagtcgaaccgaacctgtctgagctcaactcgactcgataagaattaattcggctcgaaactcaactcaagttcga 4442042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 125 - 213
Target Start/End: Original strand, 33109845 - 33109933
Alignment:
Q  125 gagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    ||||| ||||||  ||||| ||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||| | |||||||    
T  33109845 gagtcgagtcgagtcgaacttgtctgagctcggctcgactcgataagaattggttcggctcgaaactcgactcgagttcaaaacgaacc 33109933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 110 - 213
Target Start/End: Original strand, 7436698 - 7436801
Alignment:
Q  110 tctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacg 209  Q
    ||||| |||| |||| |||| ||||||| |||||||||||||||||| |||| |||||| |||| | |||||||||||||||| ||||||||| || |||    
T  7436698 tctagggctgaaaataagtcgagtcgaatcgaacctgtctgagctcgactcgactcgataagaaatggttcggctcgaaactccactcgagtttgaaacg 7436797  T
Q  210 aacc 213  Q
    ||||    
T  7436798 aacc 7436801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 22295383 - 22295449
Alignment:
Q  139 cgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    ||||| ||||| ||||||||||  ||||||||||||| |||||||||||||||||||||||||||||    
T  22295383 cgaacttgtcttagctcggctcaactcgattagaattggttcggctcgaaactcgactcgagttcga 22295449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 3082467 - 3082370
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||||||||||||  ||||||||||||||| |||||||| | ||||  || || |||| | ||| |||||||||||||||| |||||||| |||||||    
T  3082467 gctggaaatgagttgagtcgaaccgaacctatctgagcttgactcgattcaataagaaatggttgggctcgaaactcgactagagttcgaaacgaacc 3082370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 12428088 - 12428143
Alignment:
Q  157 gctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    ||||| |||||| ||||||  |||||||||||||||||||||||||||||||||||    
T  12428088 gctcgactcgataagaattgattcggctcgaaactcgactcgagttcgatacgaac 12428143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 13311380 - 13311449
Alignment:
Q  144 ctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    ||||||||||||| |||| |||||| |||||| ||||| ||| |||||||  |||||||||| |||||||    
T  13311380 ctgtctgagctcgactcgactcgataagaattggttcgactcaaaactcggttcgagttcgaaacgaacc 13311449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 8291557 - 8291456
Alignment:
Q  110 tctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacg 209  Q
    |||||||||||||||||||| ||  ||  | ||| ||  | ||||||||||| |||||| | | ||||||||||||||||||| |||| | |||| ||||    
T  8291557 tctagagctggaaatgagtcgagctgagtcaaacttgcttcagctcggctcgactcgataaaatttagttcggctcgaaactcaactcaaattcgttacg 8291458  T
Q  210 aa 211  Q
    ||    
T  8291457 aa 8291456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 10962558 - 10962513
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcg 161  Q
    |||||||||||||| ||||||| ||||||| |||||||||| ||||    
T  10962558 gctggaaatgagtcgagtcgaatcgaacctatctgagctcgactcg 10962513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 9e-26; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 36418524 - 36418619
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaa 211  Q
    |||||||||||||| ||||||| |||| ||| |||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||||| |||||    
T  36418524 gctggaaatgagtcgagtcgaatcgaatctgcctgagctcggctcgactcgataagaattggttcggctcgaaactcggctcgagttcgacacgaa 36418619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 29678245 - 29678143
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacga 210  Q
    |||| |||||||||||||| ||||||| |||||||||||||||| | |||| |||||| |||| | ||||||||||||||||||||| ||||||| ||||    
T  29678245 ctagggctggaaatgagtcgagtcgaatcgaacctgtctgagcttgactcgactcgataagaaatggttcggctcgaaactcgactcaagttcgaaacga 29678146  T
Q  211 acc 213  Q
    |||    
T  29678145 acc 29678143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 37441954 - 37441853
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgatt-----agaattagttcggctcgaaactcgactcgagttcgatacga 210  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||| |     |||||| ||||||||||||||||| ||||||||||| ||||    
T  37441954 gctggaaatgagtcgagtcgaaccgaacctgcctgagctcggctcggctcgactcgataagaattggttcggctcgaaactcggctcgagttcgacacga 37441855  T
Q  211 ac 212  Q
    ||    
T  37441854 ac 37441853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 5205251 - 5205149
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacga 210  Q
    |||| |||||||||||||| ||||||  ||||||||||||||||||  ||| ||| || |||||| |||||||||||||||||||||||||| || ||||    
T  5205251 ctagggctggaaatgagtcgagtcgagtcgaacctgtctgagctcgattcgactccataagaattggttcggctcgaaactcgactcgagtttgaaacga 5205152  T
Q  211 acc 213  Q
    |||    
T  5205151 acc 5205149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 47603545 - 47603463
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcg 198  Q
    |||||||||||||| |||||||||||||||| ||||| |||||||  |||||| |||||| ||||||||||||||||||||||    
T  47603545 gctggaaatgagtcgagtcgaaccgaacctgcctgagttcggctcaactcgataagaattggttcggctcgaaactcgactcg 47603463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 44595833 - 44595925
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||     || |||||| |||||| ||||||||||||| ||||||||||||||||    
T  44595833 gctggaaatgagtcgagtcgaaccgaacctgtctgagctcgactcg-----ataagaattggttcggttcgaaactcgacttgagttcgatacgaacc 44595925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 116 - 204
Target Start/End: Original strand, 28005739 - 28005827
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcg 204  Q
    |||||||||||||| ||||||  ||||||| |||||||||| |||| |||||| |||||| ||||||||||||||||||||| ||||||    
T  28005739 gctggaaatgagtcgagtcgagtcgaacctctctgagctcgactcgactcgataagaattggttcggctcgaaactcgactcaagttcg 28005827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 32179337 - 32179433
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||  ||||| |||||| ||||||||||||||||| || ||||| || ||||||    
T  32179337 gctggaaatgagtcgagtcgaaccgaacttgcctgagctcggctcgattcgataagaattggttcggctcgaaactcggcttgagtttgacacgaac 32179433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 38061760 - 38061666
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    |||| |||||||||||||| ||||||  ||||||||||||||||||  ||| |||||| |||||| ||||||||| ||| |||||||||||||||    
T  38061760 ctagggctggaaatgagtcgagtcgagtcgaacctgtctgagctcgattcgactcgataagaattggttcggctcaaaattcgactcgagttcga 38061666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 187
Target Start/End: Complemental strand, 24470650 - 24470579
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcga 187  Q
    |||||||||||||| |||||||||||||||| |||||||||||||  |||||| |||||| |||||||||||    
T  24470650 gctggaaatgagtcgagtcgaaccgaacctgcctgagctcggctcaactcgataagaattggttcggctcga 24470579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 35309012 - 35309099
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttc 203  Q
    |||||||||||||  |||||||||||||||  |||||||||| ||| |||||| |||||| |||||||||||||||||  ||||||||    
T  35309012 gctggaaatgagttgagtcgaaccgaacctacctgagctcggttcgactcgataagaattggttcggctcgaaactcggttcgagttc 35309099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 118 - 212
Target Start/End: Original strand, 24575306 - 24575400
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||| ||||||  ||||||||||||||||||  | |  ||||| |||||| |||||||||||||||||||||||||| || ||||||    
T  24575306 tggaaatgagtcgagtcgagtcgaacctgtctgagctcgatttgaatcgataagaattggttcggctcgaaactcgactcgagtttgaaacgaac 24575400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 211
Target Start/End: Original strand, 7955655 - 7955748
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaa 211  Q
    |||||||||||| ||||||  |||| ||||||||||||| |||| ||| || |||||| |||||||||||||||||  |||||||||| |||||    
T  7955655 tggaaatgagtcgagtcgagtcgaatctgtctgagctcgactcgactcaataagaattggttcggctcgaaactcggttcgagttcgaaacgaa 7955748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 13645817 - 13645766
Alignment:
Q  151 agctcggctcggctcgattagaattagttcggctcgaaactcgactcgagtt 202  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  13645817 agctcggctcgactcgattagaattggttcggctcgaaactcgactcgagtt 13645766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 30211799 - 30211860
Alignment:
Q  149 tgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacga 210  Q
    ||||||||  |||||||||| | ||||||||||||||||||||| |||||||||||||||||    
T  30211799 tgagctcgattcggctcgataaaaattagttcggctcgaaactcaactcgagttcgatacga 30211860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 45654501 - 45654408
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaa 211  Q
    |||||||||||| ||||||  |||||||| ||||||||| |||| |||||| |||||| |||| ||| |||| ||| ||||||||||| |||||    
T  45654501 tggaaatgagtcgagtcgagtcgaacctgcctgagctcgactcgactcgataagaattggttcagcttgaaattcggctcgagttcgacacgaa 45654408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 43090163 - 43090072
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||||||| ||||||  ||||| ||||||||||||||||| |      |||||| ||||||||||||||||||||||||||| | ||||||    
T  43090163 gctggaaatgagtcgagtcgagtcgaacttgtctgagctcggctcgaca-----agaattggttcggctcgaaactcgactcgagttcaaaacgaac 43090072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 146 - 213
Target Start/End: Original strand, 31868923 - 31868990
Alignment:
Q  146 gtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||||||||||||||| ||| || ||||||   |||||||||||||||||||||||||||||| ||||    
T  31868923 gtctgagctcggctcgactcaataagaattgactcggctcgaaactcgactcgagttcgatacaaacc 31868990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 15257959 - 15257885
Alignment:
Q  139 cgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||| ||||||||||||  |||| |||||| |||||| |||||||||||||||||  |||||||||| |||||||    
T  15257959 cgaatctgtctgagctcaactcgactcgataagaattggttcggctcgaaactcggttcgagttcgaaacgaacc 15257885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 45582235 - 45582158
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcg 193  Q
    |||||||||||||| ||||||  |||| |||| |||||||| |||| |||||| || |||||||| ||||||||||||    
T  45582235 gctggaaatgagtcgagtcgagtcgaatctgtatgagctcgactcgactcgataaggattagttcagctcgaaactcg 45582158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 212
Target Start/End: Complemental strand, 48575867 - 48575776
Alignment:
Q  121 aaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    ||||||||| | ||||| ||||| |||||||||||| |||| |||||| ||||||  || | ||||||||||||||| ||||| | ||||||    
T  48575867 aaatgagtcgaatcgaatcgaacatgtctgagctcgactcgactcgataagaatttatttgactcgaaactcgactcaagttcaacacgaac 48575776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 7994773 - 7994847
Alignment:
Q  139 cgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    ||||||||| |||| ||| |||  |||||| ||||||  ||| |||||||||||||||||||||||| |||||||    
T  7994773 cgaacctgtttgagttcgactcaactcgataagaattgattcagctcgaaactcgactcgagttcgaaacgaacc 7994847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 118 - 212
Target Start/End: Complemental strand, 21681756 - 21681662
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||||||||| | ||||||  |||||||| ||||||||  |||| |||||| |||||| |||| |||  ||||||| ||||||||||| ||||||    
T  21681756 tggaaatgagccgagtcgagtcgaacctgcctgagctcaactcgactcgataagaattggttcagcttaaaactcggctcgagttcgacacgaac 21681662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 14579167 - 14579108
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaatt 175  Q
    |||||||||||||| ||||||| ||||||||| |||||||| |||| |||| | ||||||    
T  14579167 gctggaaatgagtcgagtcgaatcgaacctgtatgagctcgactcgactcgttaagaatt 14579108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 23916135 - 23916194
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaatt 175  Q
    |||||||||||||| ||||||| ||||||||||| |||||| |||| |||| | ||||||    
T  23916135 gctggaaatgagtcgagtcgaatcgaacctgtctaagctcgactcgactcgttaagaatt 23916194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 7595724 - 7595810
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagtt 202  Q
    ||||||||| |||||| ||||| |||| ||||||||||||  |||| |||| | |||||||| |||| ||||| ||||  |||||||    
T  7595724 gctggaaataagtcaaatcgaatcgaatctgtctgagctcaactcgactcgttaagaattagctcggttcgaacctcggttcgagtt 7595810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 15305917 - 15305983
Alignment:
Q  147 tctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||||||||| |||| ||| || ||||||   ||||||| |||||||||||||||| ||||||||||    
T  15305917 tctgagctcgactcgactcaataagaattgactcggctcaaaactcgactcgagtttgatacgaacc 15305983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 46265742 - 46265656
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagtt 202  Q
    |||||||||||||| ||| ||| ||||||||| | |||||  || | |||| | ||||||||||||| ||||| ||||| |||||||    
T  46265742 gctggaaatgagtcgagttgaatcgaacctgtttaagctcaacttgactcgttaagaattagttcggttcgaacctcgattcgagtt 46265656  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 18349882 - 18349826
Alignment:
Q  152 gctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatac 208  Q
    |||| |||||||||||| |||||| | |  |||| ||||||||||||||||||||||    
T  18349882 gctcagctcggctcgataagaatttgataagctcaaaactcgactcgagttcgatac 18349826  T

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Target: scaffold0316 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 18709 - 18810
Alignment:
Q  111 ctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacga 210  Q
    |||| |||||||||||||| |||||||||||| |||| ||||||||||||| |||||| |||||| ||||||||| |||||||  |||||||||| ||||    
T  18709 ctagggctggaaatgagtcgagtcgaaccgaatctgtttgagctcggctcgactcgataagaattggttcggctcaaaactcggttcgagttcgacacga 18808  T
Q  211 ac 212  Q
    ||    
T  18809 ac 18810  T

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Target: chr8 (Bit Score: 58; Significance: 1e-24; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 9413400 - 9413303
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||||||||||||| |||||||| |||| |||||||||||| |||| |||||| |||| | |||||||||||||||||||| |||||||| |||||||    
T  9413400 gctggaaatgagtcgagtcgaactgaacttgtctgagctcgactcgactcgataagaaatggttcggctcgaaactcgacttgagttcgacacgaacc 9413303  T

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Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 121 - 204
Target Start/End: Original strand, 11161087 - 11161170
Alignment:
Q  121 aaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcg 204  Q
    ||||||||| |||||||||| ||||| |||||||||||||  |||||| |||||| |||||||||||| |||| ||||||||||    
T  11161087 aaatgagtcgagtcgaaccggacctgcctgagctcggctccactcgataagaattggttcggctcgaacctcggctcgagttcg 11161170  T

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Target: chr8; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 22930979 - 22930896
Alignment:
Q  117 ctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    ||||||||||||| |||||||||||||||||||||      |||| |||||| |||||| ||||||||||||||||| |||||||||||    
T  22930979 ctggaaatgagtcgagtcgaaccgaacctgtctga-----actcgactcgataagaattggttcggctcgaaactcggctcgagttcga 22930896  T

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Target: chr8; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 43966909 - 43966973
Alignment:
Q  139 cgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttc 203  Q
    ||||| ||||||| ||||||||| |||||| |||||| |||||||||||||||||||||||||||    
T  43966909 cgaacttgtctgaactcggctcgactcgataagaattggttcggctcgaaactcgactcgagttc 43966973  T

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Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 22563277 - 22563358
Alignment:
Q  131 agtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    ||||||| |||| |||||||||||||||||  |||||| ||| || | ||||||||||||||||||||||||| | ||||||    
T  22563277 agtcgaatcgaatctgtctgagctcggctcaactcgataagattttgctcggctcgaaactcgactcgagttcaacacgaac 22563358  T

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Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 12377748 - 12377821
Alignment:
Q  139 cgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    ||||||||||||| |||| ||||  ||||| |||||  |||| |||||||||||||||||||||||| ||||||    
T  12377748 cgaacctgtctgaactcgactcgattcgataagaatgtgttcagctcgaaactcgactcgagttcgaaacgaac 12377821  T

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Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 25731983 - 25731900
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgat 206  Q
    |||||||||||| ||||||||||||  |||||||||||| ||||     || |||||| ||||||||||||| ||||||| ||||||||    
T  25731983 tggaaatgagtcgagtcgaaccgaatttgtctgagctcgactcg-----ataagaattggttcggctcgaaagtcgactcaagttcgat 25731900  T

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Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 27189695 - 27189630
Alignment:
Q  110 tctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaatt 175  Q
    ||||| |||||||||||||| ||||||| ||||| |||||||||||| |||| |||| | ||||||    
T  27189695 tctagggctggaaatgagtcgagtcgaatcgaacttgtctgagctcgactcgactcgttaagaatt 27189630  T

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Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 175
Target Start/End: Complemental strand, 33280772 - 33280715
Alignment:
Q  118 tggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaatt 175  Q
    |||||||||||| ||||||| |||||||||||||| ||| |||| |||| ||||||||    
T  33280772 tggaaatgagtcgagtcgaatcgaacctgtctgagttcgactcgactcgtttagaatt 33280715  T

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Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 17865763 - 17865721
Alignment:
Q  163 ctcgattagaattagttcggctcgaaactcgactcgagttcga 205  Q
    |||||| |||||| |||| ||||||||||||||||||||||||    
T  17865763 ctcgataagaattggttcagctcgaaactcgactcgagttcga 17865721  T

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Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 156
Target Start/End: Original strand, 34515553 - 34515599
Alignment:
Q  110 tctagagctggaaatgagtcaagtcgaaccgaacctgtctgagctcg 156  Q
    ||||| |||||||||||||| ||||||| ||||||| ||||||||||    
T  34515553 tctagggctggaaatgagtcgagtcgaatcgaacctatctgagctcg 34515599  T

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Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 39477445 - 39477518
Alignment:
Q  139 cgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||| ||||||||||||| |||| |||||| |||||| |||||  |||||||| | ||||| ||||| ||||||    
T  39477445 cgaatctgtctgagctcgactcgactcgataagaattggttcgattcgaaacttggctcgaattcgaaacgaac 39477518  T

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Target: scaffold0106 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 116 - 212
Target Start/End: Original strand, 26497 - 26593
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    ||||||||| |||| ||| ||| ||||||||| |||||||| |||| |||||| |||||| |||| |||||||| ||||||||||||||| ||||||    
T  26497 gctggaaatcagtcgagttgaatcgaacctgtttgagctcgactcgactcgataagaattggttcagctcgaaattcgactcgagttcgaaacgaac 26593  T

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Target: scaffold0658 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0658
Description:

Target: scaffold0658; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 6529 - 6433
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaac 212  Q
    |||| ||||||||| |||||||  ||||||| ||||||||| |||| |||||| |||||| |||||| | |||||||| ||||||||||| ||||||    
T  6529 gctgaaaatgagtcgagtcgaattgaacctgcctgagctcgactcgactcgataagaattggttcgggttgaaactcggctcgagttcgacacgaac 6433  T

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Target: scaffold0043 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 202
Target Start/End: Original strand, 16496 - 16582
Alignment:
Q  116 gctggaaatgagtcaagtcgaaccgaacctgtctgagctcggctcggctcgattagaattagttcggctcgaaactcgactcgagtt 202  Q
    |||||||||||||| ||||||| |||||||||||||||||| |||  ||| |  | |||  ||||||||||||||||||||||||||    
T  16496 gctggaaatgagtcgagtcgaatcgaacctgtctgagctcgactcaactcaacaaaaatatgttcggctcgaaactcgactcgagtt 16582  T

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Target: scaffold0444 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 1508 - 1452
Alignment:
Q  157 gctcggctcgattagaattagttcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    ||||| |||||| |||||| |||||||||||||||||||||||||| || |||||||    
T  1508 gctcgactcgataagaattggttcggctcgaaactcgactcgagtttgaaacgaacc 1452  T

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Target: scaffold0025 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 4745 - 4779
Alignment:
Q  179 tcggctcgaaactcgactcgagttcgatacgaacc 213  Q
    |||||||||||||||||||||||||||||||||||    
T  4745 tcggctcgaaactcgactcgagttcgatacgaacc 4779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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