View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14742_low_15 (Length: 365)
Name: NF14742_low_15
Description: NF14742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14742_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 46086492 - 46086747
Alignment:
| Q |
1 |
caattacaattcacacgtcgaataaatatatagcataagtttctcaaataagtttttcgtaatcataaggcttacataacaaaaaatccaagaaatgaaa |
100 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |
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| T |
46086492 |
caattacaattcacacgtagaataaatatatagcataagtttctcaaataagtttttcgcaatcataaggcttacgtaacaaaaaatccaagaaatgaaa |
46086591 |
T |
|
| Q |
101 |
attatacctgaccataagcgagaaccgtggcattatatccattgaaaagtgcatcaacgagcggtgctacacaatcattgtaaatcgtagatgaaggttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |
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| T |
46086592 |
attatacctgaccataagcgagaaccgtggcattatatccattgaaaagtgcatcaacgagcggtgctacacaatcatcgtaaatagtagatgaaggttg |
46086691 |
T |
|
| Q |
201 |
tcccgtgctaccatacacataatcatacgtaaaggaatgagatccaatttgcacct |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
46086692 |
tcccgtgctaccatacacataatcatacgtaaaggaatgagatccaatttgcacct |
46086747 |
T |
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