View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14742_low_23 (Length: 274)
Name: NF14742_low_23
Description: NF14742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14742_low_23 |
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Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 4 - 257
Target Start/End: Complemental strand, 50712693 - 50712444
Alignment:
| Q |
4 |
aagtacaaagaaaacaaaccccatgcatatatgtccctccaatgcaatcatagtgcctagagagttgtttgataaacacaacacacacaaaaaatattat |
103 |
Q |
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| T |
50712693 |
aagtacaaagaaaacaaaccccatgcatatatgtccctccaatgcaatcatagtgcctagagagttgtttgataaacacaacacacacaaaaaatattat |
50712594 |
T |
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| Q |
104 |
aataagcaaatagaatgttttatagagctagctctttgtgtatctatctatataatgtctcttctctttgtatataatataaaacaaagaagaagaaaaa |
203 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50712593 |
aataagcaaatagaatgttttatagaactagctctttgtgtat----ctatataatatctcttctctttgtatataatataaaacaaagaagaagaaaaa |
50712498 |
T |
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| Q |
204 |
agaacgtatgtggttgtttgttgtggattgggatttttgatttatgtacacctt |
257 |
Q |
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| T |
50712497 |
agaacgtatgtggttgtttgttgtggattgggatttgtgatttatgtatacctt |
50712444 |
T |
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