View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14743_low_6 (Length: 339)
Name: NF14743_low_6
Description: NF14743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14743_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 324
Target Start/End: Original strand, 26276195 - 26276518
Alignment:
| Q |
1 |
gcaattttgctagtaagttttccatcaacggaggccctccaattcagcctatcatgggaatcatcaatagagagggtaaccgtgagaatttgctttgcta |
100 |
Q |
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| T |
26276195 |
gcaattttgctagtaagttttccatcaacagaggccctccaattcagcctatcatgggaatcatcaatagagagggtaaccgtgagaatttgctttgcta |
26276294 |
T |
|
| Q |
101 |
actctttagacttttgtatcagatacatggggatattccaattaccatccagaatgtaatctgctaccttcatgttaagggcagggtgcatgtgcagagg |
200 |
Q |
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| T |
26276295 |
actctttagacttttgtatcagatacatggggatattccaattaccatccagaatgtaatctgctaccttcatgttaagggcagggtgcatgtgcagagg |
26276394 |
T |
|
| Q |
201 |
gatattaagagattccacaatagattgttctaaccatttatctgtccagaagttgacagtgttcccattacctattgaccatgaggattgctcagcaatc |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
26276395 |
gatattaagagattccacaatagattgttctaaccatttgtctgtccagaagttgacagtgttcccattacctattgaccatgaggattgctcagcattc |
26276494 |
T |
|
| Q |
301 |
attctgagatggactctcattccc |
324 |
Q |
| |
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||||||||||||||| |||||||| |
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| T |
26276495 |
attctgagatggactatcattccc |
26276518 |
T |
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