View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14744_high_23 (Length: 219)
Name: NF14744_high_23
Description: NF14744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14744_high_23 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 12875700 - 12875919
Alignment:
| Q |
1 |
taaaaattcacgttgagaaggtgagaagagaaagtgtgttataaactgtattgacgatgacatacatgtggtcaacaacttgctaatcaagaaggtttag |
100 |
Q |
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| T |
12875700 |
taaaaattcatgttgagaaggtgagaagagaaagtgtgttataaactgtattgacgatgacatacatgtggtcaacaacttgctaatcaagaaggtttag |
12875799 |
T |
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| Q |
101 |
gaccattcttttgggaattaaatggccaagggtcccttttaataaggtcaacc-taatggtgcctttgatgaaaagttgtttttaagatatgtttgagtt |
199 |
Q |
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| T |
12875800 |
gaccattcttttgggaattaaatggccaagggtcccttttaataaggtcaaccttaatggtgcctttgatgaaaagttgttttaaagatatgtttgagtt |
12875899 |
T |
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| Q |
200 |
tgtccttgagccttgtgtga |
219 |
Q |
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|||||||||||||||||||| |
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| T |
12875900 |
tgtccttgagccttgtgtga |
12875919 |
T |
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