View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14744_low_23 (Length: 232)

Name: NF14744_low_23
Description: NF14744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14744_low_23
NF14744_low_23
[»] chr5 (56 HSPs)
chr5 (55-121)||(1063301-1063367)
chr5 (1-55)||(27314470-27314524)
chr5 (1-60)||(25772144-25772203)
chr5 (1-55)||(1996842-1996896)
chr5 (1-55)||(1996939-1996993)
chr5 (1-56)||(20019839-20019894)
chr5 (1-56)||(25772246-25772301)
chr5 (1-56)||(27314566-27314621)
chr5 (4-56)||(26300105-26300157)
chr5 (1-56)||(291889-291944)
chr5 (1-56)||(7725045-7725100)
chr5 (1-55)||(7724955-7725009)
chr5 (1-55)||(29232895-29232949)
chr5 (1-55)||(39035478-39035532)
chr5 (187-232)||(1063434-1063479)
chr5 (6-62)||(43446847-43446903)
chr5 (1-52)||(16899778-16899829)
chr5 (6-56)||(3851459-3851509)
chr5 (2-56)||(23914933-23914987)
chr5 (4-58)||(25408535-25408589)
chr5 (1-51)||(25792937-25792987)
chr5 (2-55)||(5259477-5259530)
chr5 (4-57)||(19531294-19531347)
chr5 (2-55)||(26141750-26141803)
chr5 (24-56)||(6763811-6763843)
chr5 (24-56)||(23914835-23914867)
chr5 (4-56)||(26300205-26300257)
chr5 (4-52)||(42013820-42013868)
chr5 (6-62)||(43447464-43447520)
chr5 (4-55)||(71254-71305)
chr5 (25-56)||(5259379-5259410)
chr5 (4-55)||(11171997-11172047)
chr5 (4-55)||(26045260-26045311)
chr5 (4-55)||(33075060-33075111)
chr5 (4-55)||(37944597-37944648)
chr5 (25-56)||(41180328-41180359)
chr5 (1-56)||(43506185-43506240)
chr5 (6-56)||(1098723-1098773)
chr5 (24-58)||(11795728-11795762)
chr5 (6-56)||(12646600-12646650)
chr5 (25-55)||(26141870-26141900)
chr5 (4-46)||(37944696-37944738)
chr5 (22-55)||(6763692-6763725)
chr5 (3-52)||(7330070-7330119)
chr5 (4-57)||(9707078-9707131)
chr5 (23-56)||(12750231-12750264)
chr5 (26-55)||(13311170-13311199)
chr5 (2-59)||(25037122-25037179)
chr5 (4-57)||(25408637-25408690)
chr5 (24-56)||(3851357-3851389)
chr5 (23-55)||(8961214-8961246)
chr5 (24-56)||(10437751-10437783)
chr5 (4-56)||(13356100-13356152)
chr5 (24-56)||(14772542-14772574)
chr5 (1-49)||(34867642-34867690)
chr5 (24-56)||(35969122-35969154)
[»] chr7 (56 HSPs)
chr7 (1-56)||(2297325-2297380)
chr7 (1-56)||(2360443-2360498)
chr7 (1-56)||(10422899-10422954)
chr7 (1-55)||(8571377-8571431)
chr7 (1-55)||(8571473-8571527)
chr7 (1-55)||(12171237-12171291)
chr7 (1-59)||(26824897-26824955)
chr7 (1-60)||(2360540-2360599)
chr7 (1-56)||(8595238-8595293)
chr7 (1-56)||(46648718-46648773)
chr7 (1-55)||(46648340-46648394)
chr7 (1-58)||(8595139-8595196)
chr7 (1-58)||(16777884-16777941)
chr7 (1-57)||(12171333-12171389)
chr7 (1-56)||(6585990-6586045)
chr7 (5-55)||(10422803-10422853)
chr7 (1-55)||(28285480-28285534)
chr7 (4-56)||(34703537-34703589)
chr7 (4-56)||(38238878-38238930)
chr7 (4-52)||(43813123-43813171)
chr7 (4-55)||(1706828-1706879)
chr7 (1-56)||(23797342-23797397)
chr7 (2-57)||(24935885-24935940)
chr7 (2-56)||(6455543-6455597)
chr7 (1-55)||(10095714-10095768)
chr7 (1-55)||(26825009-26825063)
chr7 (22-56)||(38238777-38238811)
chr7 (4-57)||(12274903-12274956)
chr7 (1-49)||(2297422-2297470)
chr7 (2-58)||(6455641-6455697)
chr7 (4-56)||(21886461-21886513)
chr7 (1-57)||(41404008-41404064)
chr7 (25-56)||(10414933-10414964)
chr7 (1-48)||(10981838-10981885)
chr7 (4-55)||(15051078-15051129)
chr7 (23-58)||(15051196-15051231)
chr7 (4-55)||(18234439-18234490)
chr7 (4-55)||(23797442-23797493)
chr7 (4-55)||(25079202-25079253)
chr7 (1-56)||(25245234-25245289)
chr7 (25-56)||(34275307-34275338)
chr7 (1-55)||(5950285-5950339)
chr7 (25-55)||(8447712-8447742)
chr7 (1-55)||(8561201-8561255)
chr7 (4-58)||(25079301-25079355)
chr7 (22-56)||(27554609-27554643)
chr7 (25-55)||(28949390-28949420)
chr7 (2-48)||(41872143-41872189)
chr7 (23-57)||(43103065-43103099)
chr7 (2-55)||(8447809-8447862)
chr7 (4-49)||(40417000-40417045)
chr7 (24-56)||(4407733-4407765)
chr7 (4-56)||(22752654-22752706)
chr7 (4-56)||(31319610-31319662)
chr7 (25-57)||(34275184-34275216)
chr7 (23-55)||(40416901-40416933)
[»] chr1 (71 HSPs)
chr1 (1-56)||(29302058-29302113)
chr1 (1-56)||(29302156-29302211)
chr1 (1-59)||(47677-47735)
chr1 (1-57)||(47777-47833)
chr1 (1-55)||(11989400-11989454)
chr1 (1-55)||(35156260-35156314)
chr1 (1-56)||(11989303-11989358)
chr1 (1-56)||(13043800-13043855)
chr1 (1-56)||(35156334-35156389)
chr1 (1-55)||(27936762-27936816)
chr1 (4-56)||(23944031-23944083)
chr1 (24-60)||(37734887-37734923)
chr1 (4-55)||(1035981-1036032)
chr1 (4-55)||(8258037-8258088)
chr1 (1-56)||(13043715-13043770)
chr1 (58-121)||(43742680-43742743)
chr1 (4-62)||(3384211-3384269)
chr1 (6-56)||(31008253-31008303)
chr1 (2-56)||(33939389-33939443)
chr1 (6-56)||(38834605-38834655)
chr1 (1-55)||(39075844-39075898)
chr1 (2-56)||(45115262-45115316)
chr1 (2-56)||(48022687-48022741)
chr1 (2-55)||(639891-639944)
chr1 (6-55)||(4060267-4060316)
chr1 (4-49)||(5431434-5431479)
chr1 (4-57)||(14214543-14214596)
chr1 (6-55)||(36486534-36486583)
chr1 (4-57)||(39216096-39216149)
chr1 (4-56)||(6065455-6065507)
chr1 (24-56)||(6065575-6065607)
chr1 (4-56)||(8984282-8984334)
chr1 (4-56)||(14214623-14214675)
chr1 (4-56)||(14418151-14418203)
chr1 (4-56)||(15351709-15351761)
chr1 (4-56)||(19175682-19175734)
chr1 (24-56)||(27206873-27206905)
chr1 (25-57)||(28725581-28725613)
chr1 (24-56)||(33604105-33604137)
chr1 (24-56)||(40262580-40262612)
chr1 (24-56)||(48022589-48022621)
chr1 (24-55)||(639794-639825)
chr1 (4-51)||(1409143-1409190)
chr1 (4-55)||(8257938-8257989)
chr1 (25-60)||(23575307-23575342)
chr1 (25-56)||(36040140-36040171)
chr1 (25-56)||(36040261-36040292)
chr1 (1-56)||(39075999-39076054)
chr1 (25-56)||(41161580-41161611)
chr1 (4-55)||(48083598-48083649)
chr1 (1-55)||(1602908-1602962)
chr1 (6-56)||(2352991-2353041)
chr1 (25-55)||(6283530-6283560)
chr1 (2-52)||(8338673-8338723)
chr1 (1-55)||(9590739-9590793)
chr1 (1-55)||(23398414-23398468)
chr1 (25-55)||(28725461-28725491)
chr1 (25-55)||(33939292-33939322)
chr1 (6-56)||(39515061-39515111)
chr1 (4-49)||(5431342-5431387)
chr1 (24-57)||(17490481-17490514)
chr1 (2-55)||(33603986-33604039)
chr1 (23-60)||(34658376-34658413)
chr1 (4-53)||(34953990-34954039)
chr1 (4-56)||(1035881-1035933)
chr1 (1-53)||(3013701-3013753)
chr1 (4-56)||(6758540-6758592)
chr1 (24-56)||(31008373-31008405)
chr1 (23-51)||(37734772-37734800)
chr1 (1-49)||(46906862-46906910)
chr1 (4-56)||(52923317-52923369)
[»] chr4 (39 HSPs)
chr4 (1-56)||(28702055-28702110)
chr4 (1-57)||(28702152-28702208)
chr4 (1-56)||(34134594-34134649)
chr4 (1-55)||(17655046-17655100)
chr4 (1-58)||(17655153-17655210)
chr4 (1-48)||(21859484-21859531)
chr4 (1-48)||(21915347-21915394)
chr4 (4-58)||(54164907-54164961)
chr4 (2-56)||(54713092-54713146)
chr4 (4-56)||(36072564-36072616)
chr4 (4-55)||(13689630-13689681)
chr4 (1-52)||(19878145-19878196)
chr4 (4-55)||(55087805-55087856)
chr4 (4-58)||(5281229-5281283)
chr4 (1-59)||(35151652-35151710)
chr4 (6-55)||(5418611-5418660)
chr4 (5-58)||(26920664-26920717)
chr4 (2-55)||(56328542-56328595)
chr4 (4-56)||(19934732-19934784)
chr4 (25-56)||(21884012-21884043)
chr4 (4-55)||(29006830-29006881)
chr4 (1-56)||(33376127-33376182)
chr4 (25-56)||(49481995-49482026)
chr4 (24-55)||(52817681-52817712)
chr4 (25-56)||(56328443-56328474)
chr4 (2-56)||(14450951-14451005)
chr4 (2-52)||(20294523-20294573)
chr4 (2-56)||(52817561-52817615)
chr4 (1-50)||(38381976-38382025)
chr4 (6-55)||(44156096-44156145)
chr4 (2-55)||(49481875-49481928)
chr4 (25-57)||(6126767-6126799)
chr4 (4-48)||(13689538-13689582)
chr4 (4-56)||(19934632-19934684)
chr4 (1-57)||(20788126-20788182)
chr4 (1-53)||(23568471-23568523)
chr4 (4-56)||(52281112-52281164)
chr4 (4-56)||(52674911-52674963)
chr4 (4-56)||(54164807-54164859)
[»] chr3 (54 HSPs)
chr3 (1-55)||(22456271-22456325)
chr3 (1-55)||(40470509-40470563)
chr3 (1-55)||(40470413-40470467)
chr3 (1-56)||(26143539-26143594)
chr3 (1-55)||(43818857-43818911)
chr3 (6-55)||(52168278-52168327)
chr3 (4-56)||(10872766-10872818)
chr3 (4-56)||(51239337-51239389)
chr3 (1-56)||(331889-331944)
chr3 (23-58)||(17552469-17552504)
chr3 (4-57)||(5919425-5919479)
chr3 (1-59)||(30578313-30578371)
chr3 (2-55)||(8439350-8439403)
chr3 (2-55)||(8504845-8504898)
chr3 (6-55)||(38455261-38455310)
chr3 (2-55)||(38677560-38677613)
chr3 (25-58)||(50261049-50261082)
chr3 (4-56)||(7601908-7601960)
chr3 (23-55)||(41349655-41349687)
chr3 (24-56)||(51239237-51239269)
chr3 (26-58)||(51617447-51617479)
chr3 (5-56)||(9170106-9170157)
chr3 (197-232)||(9720149-9720184)
chr3 (54-121)||(9720228-9720295)
chr3 (1-56)||(12708682-12708737)
chr3 (24-55)||(21404008-21404039)
chr3 (1-56)||(22496945-22497000)
chr3 (1-56)||(26244471-26244526)
chr3 (24-55)||(29565104-29565135)
chr3 (1-44)||(34063761-34063804)
chr3 (24-55)||(36362599-36362630)
chr3 (25-56)||(38677680-38677711)
chr3 (24-55)||(41349775-41349806)
chr3 (1-48)||(43818944-43818991)
chr3 (1-55)||(7882276-7882330)
chr3 (25-55)||(25881131-25881161)
chr3 (25-55)||(25881251-25881281)
chr3 (1-55)||(27224671-27224725)
chr3 (4-57)||(12744894-12744947)
chr3 (1-50)||(21217166-21217215)
chr3 (2-51)||(26104773-26104822)
chr3 (6-55)||(29512227-29512276)
chr3 (23-52)||(29720189-29720218)
chr3 (24-57)||(51617324-51617357)
chr3 (23-56)||(52931635-52931668)
chr3 (4-56)||(2128455-2128507)
chr3 (24-60)||(10872662-10872698)
chr3 (24-56)||(26367465-26367497)
chr3 (24-56)||(33412579-33412611)
chr3 (4-48)||(36566729-36566773)
chr3 (24-56)||(38455159-38455191)
chr3 (24-56)||(45736681-45736713)
chr3 (24-56)||(50260927-50260959)
chr3 (7-55)||(52215875-52215923)
[»] chr8 (36 HSPs)
chr8 (1-58)||(17087347-17087404)
chr8 (1-58)||(42749047-42749104)
chr8 (1-52)||(13029405-13029456)
chr8 (1-50)||(17087438-17087487)
chr8 (1-53)||(9879006-9879058)
chr8 (1-57)||(40640271-40640327)
chr8 (1-56)||(92929-92984)
chr8 (4-55)||(1739659-1739710)
chr8 (1-56)||(9878909-9878964)
chr8 (1-56)||(24287779-24287834)
chr8 (2-55)||(33070257-33070310)
chr8 (4-57)||(40098753-40098806)
chr8 (5-56)||(92837-92888)
chr8 (2-57)||(31810426-31810481)
chr8 (2-56)||(13496527-13496581)
chr8 (25-59)||(31505029-31505063)
chr8 (1-55)||(33070160-33070214)
chr8 (6-55)||(9056117-9056166)
chr8 (2-55)||(23627661-23627714)
chr8 (2-55)||(24053592-24053645)
chr8 (4-56)||(9056015-9056067)
chr8 (24-56)||(40098874-40098906)
chr8 (4-56)||(44521342-44521394)
chr8 (24-55)||(1744227-1744258)
chr8 (4-55)||(10117064-10117115)
chr8 (24-55)||(14381233-14381264)
chr8 (25-56)||(31505153-31505184)
chr8 (1-55)||(10934694-10934748)
chr8 (1-39)||(13029338-13029376)
chr8 (4-50)||(24820391-24820437)
chr8 (1-45)||(9232538-9232583)
chr8 (2-55)||(27518407-27518460)
chr8 (4-53)||(29424077-29424126)
chr8 (4-56)||(8506311-8506363)
chr8 (25-57)||(13496428-13496460)
chr8 (24-56)||(29451725-29451757)
[»] chr6 (24 HSPs)
chr6 (2-55)||(14310613-14310666)
chr6 (2-56)||(8146041-8146095)
chr6 (2-55)||(6560749-6560802)
chr6 (4-57)||(17773595-17773648)
chr6 (24-60)||(21506453-21506489)
chr6 (25-59)||(6560648-6560682)
chr6 (2-55)||(31398318-31398371)
chr6 (4-56)||(13277116-13277168)
chr6 (24-56)||(31536305-31536337)
chr6 (4-55)||(13462928-13462979)
chr6 (1-56)||(18886302-18886357)
chr6 (4-55)||(21506557-21506608)
chr6 (1-56)||(29215534-29215589)
chr6 (24-55)||(30397838-30397869)
chr6 (11-54)||(30460714-30460757)
chr6 (25-55)||(8145943-8145973)
chr6 (6-56)||(28577595-28577645)
chr6 (25-55)||(31398221-31398251)
chr6 (23-56)||(13276480-13276513)
chr6 (6-55)||(18097055-18097104)
chr6 (25-58)||(18097175-18097208)
chr6 (24-57)||(30397718-30397751)
chr6 (24-56)||(21998033-21998065)
chr6 (4-56)||(33053759-33053811)
[»] scaffold0024 (2 HSPs)
scaffold0024 (4-56)||(120239-120291)
scaffold0024 (4-57)||(120138-120191)
[»] chr2 (42 HSPs)
chr2 (1-56)||(20057197-20057252)
chr2 (2-56)||(19612935-19612989)
chr2 (4-57)||(38598034-38598087)
chr2 (4-56)||(5574204-5574256)
chr2 (4-56)||(38594438-38594490)
chr2 (4-56)||(43426722-43426774)
chr2 (1-52)||(23992467-23992518)
chr2 (2-57)||(24457093-24457148)
chr2 (2-57)||(26234116-26234171)
chr2 (1-55)||(26229536-26229590)
chr2 (25-59)||(26234015-26234049)
chr2 (4-58)||(41805266-41805320)
chr2 (24-56)||(38594338-38594370)
chr2 (24-56)||(38597934-38597966)
chr2 (25-56)||(2060198-2060229)
chr2 (25-56)||(2060617-2060648)
chr2 (4-59)||(3123997-3124052)
chr2 (24-55)||(3887947-3887978)
chr2 (1-56)||(15119771-15119826)
chr2 (4-55)||(15446774-15446825)
chr2 (1-56)||(23992369-23992424)
chr2 (25-56)||(24457215-24457246)
chr2 (1-56)||(31102040-31102095)
chr2 (1-56)||(32316412-32316467)
chr2 (4-51)||(44274635-44274682)
chr2 (26-56)||(1980979-1981009)
chr2 (4-58)||(3887825-3887879)
chr2 (9-55)||(4817090-4817136)
chr2 (25-55)||(19950112-19950142)
chr2 (5-55)||(31101944-31101994)
chr2 (26-56)||(37195046-37195076)
chr2 (1-50)||(3098217-3098266)
chr2 (23-52)||(5574108-5574137)
chr2 (6-55)||(6074809-6074858)
chr2 (2-55)||(9431192-9431245)
chr2 (2-55)||(15119869-15119922)
chr2 (2-55)||(21488119-21488172)
chr2 (1-50)||(25270947-25270996)
chr2 (24-57)||(38465782-38465815)
chr2 (24-60)||(26003425-26003461)
chr2 (4-44)||(30902367-30902407)
chr2 (24-56)||(34248529-34248561)
[»] scaffold0536 (2 HSPs)
scaffold0536 (4-55)||(4044-4095)
scaffold0536 (24-55)||(3945-3976)
[»] scaffold0047 (1 HSPs)
scaffold0047 (24-58)||(61155-61189)
[»] scaffold0007 (2 HSPs)
scaffold0007 (4-58)||(246787-246841)
scaffold0007 (4-56)||(246889-246941)
[»] scaffold0149 (1 HSPs)
scaffold0149 (1-54)||(24697-24750)
[»] scaffold0050 (1 HSPs)
scaffold0050 (2-58)||(6205-6261)
[»] scaffold0039 (1 HSPs)
scaffold0039 (4-56)||(54382-54434)
[»] scaffold0631 (1 HSPs)
scaffold0631 (4-55)||(4342-4393)
[»] scaffold0059 (1 HSPs)
scaffold0059 (1-55)||(4464-4518)
[»] scaffold0027 (1 HSPs)
scaffold0027 (26-56)||(17161-17191)
[»] scaffold0020 (2 HSPs)
scaffold0020 (2-55)||(139291-139344)
scaffold0020 (2-55)||(139388-139441)
[»] scaffold0015 (1 HSPs)
scaffold0015 (4-55)||(17329-17378)


Alignment Details
Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 1063301 - 1063367
Alignment:
Q  55 atttaagatttgagattttaagtcgattatgtttaaggtttgccactagtttgttttatgtataaga 121  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  1063301 atttaagatttgagattttaagtcgattatgtttaagctttgccactagtttgttttatgtttaaga 1063367  T

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Target: chr5; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27314524 - 27314470
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27314524 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 27314470  T

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Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25772203 - 25772144
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatttaa 60  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  25772203 taatgaatgaatctaaaaatcaaatttttgcttatattagtgaccggagggtgtagttaa 25772144  T

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Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1996896 - 1996842
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1996896 taatgaatgaatctaaaaatcaaatttttgcttatattagtgaccggagggtgta 1996842  T

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Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1996939 - 1996993
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1996939 taatgaatgaatctaaaaatcaaatttttgcttatattagtgaccggagggtgta 1996993  T

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Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20019839 - 20019894
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  20019839 taatgaatgaatctaaaaatcaaacttttgcttatattagtgaccggagggtgtat 20019894  T

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Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25772246 - 25772301
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  25772246 taatgaatgaatctaaaaatcaaacttttgcttatattagtgaccggagggtgtat 25772301  T

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Target: chr5; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27314566 - 27314621
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||    
T  27314566 taatgaatgaatctaaaatccaaacttttgcttatatttgtgaccggagggtgtat 27314621  T

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Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 26300157 - 26300105
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  26300157 tgaatgtatctaaaaagtaaatttttgcttatattagtgaccggagggtgtat 26300105  T

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Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 291889 - 291944
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||| |||| ||||| |||||||||| ||||||||||||||    
T  291889 taatgaatgaatctaaaaatcaaacttttgtttatattagtaaccggagggtgtat 291944  T

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Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7725045 - 7725100
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||| ||||||| |||| |||||||||||||| ||||||||||||||||    
T  7725045 taatgaatgaacctaaaaatcaaacttttgcttatattaatgaccggagggtgtat 7725100  T

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Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7725009 - 7724955
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||| ||||||| |||| |||||||||||||| |||||||||||||||    
T  7725009 taatgaatgaacctaaaaatcaaacttttgcttatattaatgaccggagggtgta 7724955  T

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Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29232895 - 29232949
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||| |||||||||| ||||| ||||||||||||| |||||||||||||||    
T  29232895 taatgaataaatctaaaaatcaaatctttgcttatattaatgaccggagggtgta 29232949  T

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Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 39035478 - 39035532
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||| |||||| |||||||||||||||||||||||| | ||||||||    
T  39035478 taatgaatgaatttaaaaatcaaatttttgcttatattagtgactgaagggtgta 39035532  T

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Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 1063434 - 1063479
Alignment:
Q  187 agagaaagtcttaagttgtttatgcactttacagtatatatttaat 232  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||    
T  1063434 agagaaactcttaagttgtttatgcactttacggtatatatttaat 1063479  T

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Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 43446903 - 43446847
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatttaaga 62  Q
    |||| |||||||||  |||||||||||||||||||| |||||||||||||| |||||    
T  43446903 aatgtatctaaaaagtaaatttttgcttatattagtaaccggagggtgtatataaga 43446847  T

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Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16899778 - 16899829
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggt 52  Q
    ||||||||||| ||||||| |||| ||||||||||||||||||||| |||||    
T  16899778 taatgaatgaacctaaaaatcaaacttttgcttatattagtgaccgaagggt 16899829  T

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Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 3851459 - 3851509
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||| |||||||||   ||||||||||||||||||||||||||||||||||    
T  3851459 aatgtatctaaaaaatgaatttttgcttatattagtgaccggagggtgtat 3851509  T

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Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 23914933 - 23914987
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||| |||| ||||   ||||||||||||||||||||||||||||||||||    
T  23914933 aatgaatgtatcttaaaagtgaatttttgcttatattagtgaccggagggtgtat 23914987  T

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Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 25408589 - 25408535
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattt 58  Q
    |||||||||||||||    |||||||||||||||| |||||||||||||||||||    
T  25408589 tgaatgaatctaaaatatgaatttttgcttatatttgtgaccggagggtgtattt 25408535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25792937 - 25792987
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggaggg 51  Q
    ||||||||||| |||||||  ||||||||||||||| ||||||||||||||    
T  25792937 taatgaatgaacctaaaaagtaaatttttgcttataatagtgaccggaggg 25792987  T

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Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 5259477 - 5259530
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||   |  |||||||||||||||||||||||||||||||    
T  5259477 aatgaatgaatctaaaatgtagttttttgcttatattagtgaccggagggtgta 5259530  T

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Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 19531347 - 19531294
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||| |||||||||   |||||||||||||||| ||||||||||||||||||    
T  19531347 tgaatgtatctaaaaagtgaatttttgcttatatttgtgaccggagggtgtatt 19531294  T

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Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 26141803 - 26141750
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||   ||| ||||||||||| ||||||||||||||||||    
T  26141803 aatgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgta 26141750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 6763811 - 6763843
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||||||||||||||    
T  6763811 atttttgcttatattagtgaccggagggtgtat 6763843  T

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Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 23914867 - 23914835
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||||||||||||||    
T  23914867 atttttgcttatattagtgaccggagggtgtat 23914835  T

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Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 26300205 - 26300257
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||| |||||||||  ||| |||| ||||||||||||||||||||||||||    
T  26300205 tgaatgtatctaaaaagtaaaattttacttatattagtgaccggagggtgtat 26300257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 42013868 - 42013820
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggt 52  Q
    |||||| |||||||||   ||||||||||||||||||||||||||||||    
T  42013868 tgaatgtatctaaaaagtgaatttttgcttatattagtgaccggagggt 42013820  T

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Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 43447464 - 43447520
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatttaaga 62  Q
    |||| |||||||||   |||||||||||||||||||||||||||||| ||| |||||    
T  43447464 aatgtatctaaaaagtgaatttttgcttatattagtgaccggagggtatatgtaaga 43447520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 71305 - 71254
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||   | ||||||||||||| ||||||||||||||||||    
T  71305 tgaatgaatctaaaatatagatttttgcttataatagtgaccggagggtgta 71254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Complemental strand, 5259410 - 5259379
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||||||||||||||    
T  5259410 tttttgcttatattagtgaccggagggtgtat 5259379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 11172047 - 11171997
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||| |||||||||  ||||||||||||||||||||||||||||| ||||    
T  11172047 tgaatgtatctaaaaat-aaatttttgcttatattagtgaccggaggatgta 11171997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 26045311 - 26045260
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||   ||||||||||||||| |||| |||||||||||||    
T  26045311 tgaatgaatctaaaatataaatttttgcttataatagtaaccggagggtgta 26045260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 33075111 - 33075060
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||   ||| ||||||||||||||||||| ||||||||||    
T  33075111 tgaatgaatctaaaatataaagttttgcttatattagtgactggagggtgta 33075060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 37944648 - 37944597
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||| |||||||||   |||||||||||||||||||||||||||| ||||    
T  37944648 tgaatgtatctaaaaagtgaatttttgcttatattagtgaccggaggatgta 37944597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Original strand, 41180328 - 41180359
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||||||||||||||    
T  41180328 tttttgcttatattagtgaccggagggtgtat 41180359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43506185 - 43506240
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||   || ||||||||||| |||||||| ||||||||||    
T  43506185 taatgaatgaatctaaaaagtgaaattttgcttataatagtgaccagagggtgtat 43506240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 1098723 - 1098773
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||  ||| ||||||||||| |||||||||||||| ||||    
T  1098723 aatgaatctaaaaaataaacttttgcttataatagtgaccggagggagtat 1098773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 11795762 - 11795728
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtattt 58  Q
    ||||||||||||||||||||||||||||| |||||    
T  11795762 atttttgcttatattagtgaccggagggtatattt 11795728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 12646600 - 12646650
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||  |||||||||||||||||  |||||||||| |||||    
T  12646600 aatgaatctaaaaagtaaatttttgcttatatttatgaccggaggatgtat 12646650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Original strand, 26141870 - 26141900
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||||||||||||||||    
T  26141870 tttttgcttatattagtgaccggagggtgta 26141900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 37944696 - 37944738
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccg 46  Q
    |||||| |||||||||  |||||||||||||||||||||||||    
T  37944696 tgaatgtatctaaaaaataaatttttgcttatattagtgaccg 37944738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 6763725 - 6763692
Alignment:
Q  22 aaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||| |||||||||||||||    
T  6763725 aaatttttgcttatattaatgaccggagggtgta 6763692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 7330070 - 7330119
Alignment:
Q  3 atgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggt 52  Q
    ||||||||||||||||  |||| ||||||||||| || ||||||||||||    
T  7330070 atgaatgaatctaaaatgcaaagttttgcttataataatgaccggagggt 7330119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 9707131 - 9707078
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||||| ||| |||  ||||||||||||||| ||||||| ||||||||||||    
T  9707131 tgaatgaacctagaaagtaaatttttgcttataatagtgactggagggtgtatt 9707078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 12750231 - 12750264
Alignment:
Q  23 aatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||| |||||||||||||||||    
T  12750231 aatttttgcttatatttgtgaccggagggtgtat 12750264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 55
Target Start/End: Complemental strand, 13311199 - 13311170
Alignment:
Q  26 ttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||||||||||||||    
T  13311199 ttttgcttatattagtgaccggagggtgta 13311170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 25037179 - 25037122
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattta 59  Q
    |||||||||||||||||  |||| ||||||||||| || | || ||||||||||||||    
T  25037179 aatgaatgaatctaaaatgcaaagttttgcttataataataacaggagggtgtattta 25037122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 25408637 - 25408690
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||||||||||||   |||||||||||||||||  |||||||| ||||||||    
T  25408637 tgaatgaatctaaaacataaatttttgcttatatttatgaccggatggtgtatt 25408690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 3851389 - 3851357
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||| ||||||||||||    
T  3851389 atttttgcttatattagtgatcggagggtgtat 3851357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 8961246 - 8961214
Alignment:
Q  23 aatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||||||| ||||||||||    
T  8961246 aatttttgcttatattagtgactggagggtgta 8961214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 10437751 - 10437783
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||| |||||||||||||||||||    
T  10437751 atttttgcttataatagtgaccggagggtgtat 10437783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 13356152 - 13356100
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||| |||||||  ||| ||||||||||| ||||||||||||| |||||    
T  13356152 tgaatgaacctaaaaagtaaaattttgcttataatagtgaccggaggatgtat 13356100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 14772574 - 14772542
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||| |||||||||||||||||||    
T  14772574 atttttgcttataatagtgaccggagggtgtat 14772542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34867642 - 34867690
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggag 49  Q
    |||| |||||||||||||  |||| |||| |||||||||||||||||||    
T  34867642 taataaatgaatctaaaatgcaaagttttacttatattagtgaccggag 34867690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 35969154 - 35969122
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||||||||| |||||    
T  35969154 atttttgcttatattagtgaccggaggatgtat 35969122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2297380 - 2297325
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2297380 taatgaatgaatctaaaaatcaaatttttgcttatattagtgaccggagggtgtat 2297325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2360498 - 2360443
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2360498 taatgaatgaatctaaaaatcaaatttttgcttatattagtgaccggagggtgtat 2360443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10422899 - 10422954
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  10422899 taatgaatgaatctaaaaattaaatttttgcttatattagtgaccggagggtgtat 10422954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8571431 - 8571377
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  8571431 taatgaatgaatctaaaaatcaaacttttgcttatattagtgaccggagggtgta 8571377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8571473 - 8571527
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  8571473 taatgaatgaatttaaaaatcaaatttttgcttatattagtgaccggagggtgta 8571527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12171291 - 12171237
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  12171291 taatgaatgaatctaaaaatcaaatttttgcttatattaatgaccggagggtgta 12171237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 26824955 - 26824897
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattta 59  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  26824955 taatgaatgaatctaaaaattaaatttttgcttatactagtgaccggagggtgtattta 26824897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2360540 - 2360599
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatttaa 60  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||    
T  2360540 taataaatgaatctaaaaatcaaatttttccttatattagtgaccggagggtgtacttaa 2360599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8595238 - 8595293
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  8595238 taatgaatgaattcaaaaatcaaatttttgcttatattagtgaccggagggtgtat 8595293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46648718 - 46648773
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  46648718 taataaatgaatctaaaaatcaaaattttgcttatattagtgaccggagggtgtat 46648773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 46648394 - 46648340
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||    
T  46648394 taatgaatgaatctaaaaatcaaatttttgcttatattagtgacaggaggatgta 46648340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8595196 - 8595139
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattt 58  Q
    |||||||||||||||||||  |||||||| |||||||| |||||||||||||||||||    
T  8595196 taatgaatgaatctaaaaaataaattttttcttatatttgtgaccggagggtgtattt 8595139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 16777941 - 16777884
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattt 58  Q
    |||| ||||||||||||||  ||| |||||||||||||||||||||||||||||||||    
T  16777941 taataaatgaatctaaaaattaaacttttgcttatattagtgaccggagggtgtattt 16777884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12171333 - 12171389
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    |||| |||||||||||||| ||||||||| |||||||||||||||||| ||||||||    
T  12171333 taataaatgaatctaaaaatcaaatttttacttatattagtgaccggatggtgtatt 12171389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6586045 - 6585990
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||| ||||||| |||| ||||| |||||||||||||||||||||||||    
T  6586045 taatgaatgaagctaaaaatcaaacttttgtttatattagtgaccggagggtgtat 6585990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 10422853 - 10422803
Alignment:
Q  5 gaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  10422853 gaatgaatctaaaaattaaatttttgcttatattagtgaccggaggatgta 10422803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 28285480 - 28285534
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||| |||||| ||||||||||||||||||| |||||||||| ||||    
T  28285480 taatgaatgaatttaaaaatcaaatttttgcttatattaatgaccggaggatgta 28285534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 34703537 - 34703589
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||| |||||||||   ||||||||||||||||||||||||||||||||||    
T  34703537 tgaatgtatctaaaaagtgaatttttgcttatattagtgaccggagggtgtat 34703589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 38238878 - 38238930
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||| |||||||||  | |||||||||||||||||||||||||||||||||    
T  38238878 tgaatgtatctaaaaagtagatttttgcttatattagtgaccggagggtgtat 38238930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 43813171 - 43813123
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggt 52  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  43813171 tgaatgaatctaaaaattaaatttttgcttataatagtgaccggagggt 43813123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 1706879 - 1706828
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||| |||||||||  |||||||| |||||||||||||||||||||||||    
T  1706879 tgaatgtatctaaaaaataaatttttacttatattagtgaccggagggtgta 1706828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23797397 - 23797342
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||  |||| ||||||||||| ||||||||| |||||||||    
T  23797397 taatgaatgaatctaaaatgcaaaattttgcttataatagtgaccgaagggtgtat 23797342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 24935940 - 24935885
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||||||| ||||||   | ||||||||||||||||||||||||||||||||||    
T  24935940 aatgaatgaacctaaaatgtagatttttgcttatattagtgaccggagggtgtatt 24935885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 6455597 - 6455543
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||   ||||||||||||||| |||||| ||||||||||||    
T  6455597 aatgaatgaatctaaaatgtaaatttttgcttataatagtgatcggagggtgtat 6455543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10095768 - 10095714
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||    |||||||||||||| ||||||||||||||||||    
T  10095768 taatgaatgaatctaaaatgttaatttttgcttataatagtgaccggagggtgta 10095714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 26825009 - 26825063
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||| |||||| ||||||||| ||||||||||||| |||||| ||||    
T  26825009 taatgaatgaatttaaaaatcaaatttttacttatattagtgatcggaggatgta 26825063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 38238811 - 38238777
Alignment:
Q  22 aaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||||||||||||||||    
T  38238811 aaatttttgcttatattagtgaccggagggtgtat 38238777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 12274903 - 12274956
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    ||||||||||||||||  | ||||||||||||| |||| |||||||||||||||    
T  12274903 tgaatgaatctaaaaagtacatttttgcttataatagttaccggagggtgtatt 12274956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2297422 - 2297470
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggag 49  Q
    ||||||||||||||||||| |||| ||||| |||||||||| |||||||    
T  2297422 taatgaatgaatctaaaaatcaaacttttgtttatattagtaaccggag 2297470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 6455641 - 6455697
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattt 58  Q
    |||||||||| ||||||   | |||||||||||||||||||| ||||||||||||||    
T  6455641 aatgaatgaacctaaaatgtagatttttgcttatattagtgatcggagggtgtattt 6455697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 21886513 - 21886461
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||   ||||||||||||||| || ||||||||||||||||    
T  21886513 tgaatgaatctaaaatataaatttttgcttataataatgaccggagggtgtat 21886461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41404064 - 41404008
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    ||||||||||||||||||    |||||||||||||| ||||||||||||| ||||||    
T  41404064 taatgaatgaatctaaaatgataatttttgcttataatagtgaccggaggatgtatt 41404008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Complemental strand, 10414964 - 10414933
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||||||||||||||    
T  10414964 tttttgcttatattagtgaccggagggtgtat 10414933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10981885 - 10981838
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccgga 48  Q
    |||||||||||||||||||  ||| |||| ||||||||||||||||||    
T  10981885 taatgaatgaatctaaaaattaaacttttacttatattagtgaccgga 10981838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 15051129 - 15051078
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||| ||||||||   ||||||||||||||||| ||||||||||||||||    
T  15051129 tgaatgtatctaaaacataaatttttgcttatatttgtgaccggagggtgta 15051078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 58
Target Start/End: Original strand, 15051196 - 15051231
Alignment:
Q  23 aatttttgcttatattagtgaccggagggtgtattt 58  Q
    |||||||||||||||| |||||||||||||||||||    
T  15051196 aatttttgcttatatttgtgaccggagggtgtattt 15051231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 18234439 - 18234490
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||| |||||||||  ||||||||| |||||||||||||||||| |||||    
T  18234439 tgaatgtatctaaaaattaaatttttgtttatattagtgaccggagagtgta 18234490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 23797442 - 23797493
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||  |||| |||| |||||| ||||||||||||||||||    
T  23797442 tgaatgaatctaaaatgcaaaattttacttataatagtgaccggagggtgta 23797493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 25079253 - 25079202
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||| |||||||||  | ||||||||||||||||||||||||||| ||||    
T  25079253 tgaatgtatctaaaaagtagatttttgcttatattagtgaccggaggatgta 25079202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25245234 - 25245289
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||     ||||||||||||| |||||||||||||||||||    
T  25245234 taatgaatgaatctaaaatgttgatttttgcttataatagtgaccggagggtgtat 25245289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Original strand, 34275307 - 34275338
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||||||||||||||    
T  34275307 tttttgcttatattagtgaccggagggtgtat 34275338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5950285 - 5950339
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||    | |||||||||||| ||||||||||||||||||    
T  5950285 taatgaatgaatctaaaatgttagtttttgcttataatagtgaccggagggtgta 5950339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Complemental strand, 8447742 - 8447712
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||||||||||||||||    
T  8447742 tttttgcttatattagtgaccggagggtgta 8447712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8561201 - 8561255
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||| ||||||| |||||| |||||||||  ||||||||||||| ||||||||||    
T  8561201 taataaatgaatttaaaaatcaaatttttatttatattagtgacaggagggtgta 8561255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 25079301 - 25079355
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattt 58  Q
    |||||| |||||||||  | ||||||| ||||||||||||||||||| |||||||    
T  25079301 tgaatgtatctaaaaagtagatttttgtttatattagtgaccggaggatgtattt 25079355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 27554609 - 27554643
Alignment:
Q  22 aaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||| ||||||||||||    
T  27554609 aaatttttgcttatattagtgatcggagggtgtat 27554643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Original strand, 28949390 - 28949420
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||||||||||||||||    
T  28949390 tttttgcttatattagtgaccggagggtgta 28949420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 41872143 - 41872189
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccgga 48  Q
    |||||||||||||||||   | |||||||||||||||||||||||||    
T  41872143 aatgaatgaatctaaaatgtagatttttgcttatattagtgaccgga 41872189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 43103099 - 43103065
Alignment:
Q  23 aatttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||||||||||| ||||||||||||||||||||    
T  43103099 aatttttgcttataatagtgaccggagggtgtatt 43103065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 8447809 - 8447862
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||   | ||||||||||||| ||||||||| ||||||||    
T  8447809 aatgaatgaatctaaaatgtagatttttgcttataatagtgaccgaagggtgta 8447862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 40417000 - 40417045
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggag 49  Q
    |||||| |||||||||   |||||||||||||||||||||||||||    
T  40417000 tgaatgtatctaaaaagtgaatttttgcttatattagtgaccggag 40417045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 4407733 - 4407765
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||| |||||||||||||||||||||||||    
T  4407733 atttttgtttatattagtgaccggagggtgtat 4407765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 22752654 - 22752706
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||| | | |||||| |||||||| || ||||||||||||||    
T  22752654 tgaatgaatctaaaacctatattttttcttatatttgtaaccggagggtgtat 22752706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 31319610 - 31319662
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||  | |||||| |||||| |||||| ||||||||||||    
T  31319610 tgaatgaatctaaaaaatatatttttccttataatagtgatcggagggtgtat 31319662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 34275216 - 34275184
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||||||||||||||||||||||| ||||||    
T  34275216 tttttgcttatattagtgaccggaggatgtatt 34275184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 40416933 - 40416901
Alignment:
Q  23 aatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||| |||||||||||||||    
T  40416933 aatttttgcttatattaatgaccggagggtgta 40416901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29302113 - 29302058
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29302113 taatgaatgaatctaaaaatcaaatttttgcttatattagtgaccggagggtgtat 29302058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29302156 - 29302211
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29302156 taatgaatgaatctaaaaatcaaatttttgcttatattagtgaccggagggtgtat 29302211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 47735 - 47677
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattta 59  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||    
T  47735 taatgaatgaatctaaaaatcaaaattttacttatattagtgaccggagggtgtattta 47677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 47777 - 47833
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||    
T  47777 taatgaatgaatctaaaaatcaaagttttgcttatattaatgaccggagggtgtatt 47833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11989400 - 11989454
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  11989400 taatgaatgaatctaaaaatcaaacttttgcttatattagtgaccggatggtgta 11989454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35156314 - 35156260
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  35156314 taatgaatgaatctaaaaataaaatttttgtttatattagtgaccggagggtgta 35156260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11989358 - 11989303
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||| ||||||| |||| |||||||||||| ||||||||||||||||||    
T  11989358 taatgaatgaacctaaaaatcaaacttttgcttatatcagtgaccggagggtgtat 11989303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13043800 - 13043855
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||| |||||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  13043800 taataaatgaatctaaaaatcaaacttttgcttatattagtgatcggagggtgtat 13043855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35156334 - 35156389
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||||| |||||||    
T  35156334 taatgaatgaatctaaaaataaaacttttgcttatattagtgaccggatggtgtat 35156389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27936762 - 27936816
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||| |||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  27936762 taataaatgaatctaaaaatcaattttttgcttatattagtgactggagggtgta 27936816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 23944083 - 23944031
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||| |||||||||   ||||||||||||||||||||||||||||||||||    
T  23944083 tgaatgtatctaaaaaatgaatttttgcttatattagtgaccggagggtgtat 23944031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 37734887 - 37734923
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtatttaa 60  Q
    |||||||||||||||||||||||||||||||||||||    
T  37734887 atttttgcttatattagtgaccggagggtgtatttaa 37734923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 1035981 - 1036032
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||| |||   |||||||||||||||||||||||||||||||||    
T  1035981 tgaatgaatctagaaagtgaatttttgcttatattagtgaccggagggtgta 1036032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 8258037 - 8258088
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||| |||||||||   |||||||||||||||||||||||||||||||||    
T  8258037 tgaatgtatctaaaaagtgaatttttgcttatattagtgaccggagggtgta 8258088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13043770 - 13043715
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||| |||||||||||||| |||| ||||| ||||||||||||||||| |||||||    
T  13043770 taataaatgaatctaaaaatcaaacttttgtttatattagtgaccggaaggtgtat 13043715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 121
Target Start/End: Complemental strand, 43742743 - 43742680
Alignment:
Q  58 taagatttgagattttaagtcgattatgtttaaggtttgccactagtttgttttatgtataaga 121  Q
    |||||||||||| ||| ||||||||||||||||| |||| ||||||||||| ||| || |||||    
T  43742743 taagatttgagactttcagtcgattatgtttaagttttgtcactagtttgtattaagtttaaga 43742680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 3384269 - 3384211
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatttaaga 62  Q
    |||||| |||||||||   ||||||||||||||||| ||||||||||||||| ||||||    
T  3384269 tgaatgtatctaaaaagtgaatttttgcttatattaatgaccggagggtgtacttaaga 3384211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 31008303 - 31008253
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||| |||||||||  | |||||||||||||||||||||||||||||||||    
T  31008303 aatgtatctaaaaagtagatttttgcttatattagtgaccggagggtgtat 31008253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 33939389 - 33939443
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||   ||| ||||||||||| |||||||||||||||||||    
T  33939389 aatgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgtat 33939443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 38834655 - 38834605
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||  ||||||||||||||| |||||||||||||| ||||    
T  38834655 aatgaatctaaaaaataaatttttgcttataatagtgaccggagggagtat 38834605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 39075898 - 39075844
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||  |||| ||||||||||| |||||||| |||||||||    
T  39075898 taatgaatgaatctaaaattcaaacttttgcttatactagtgaccagagggtgta 39075844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 45115262 - 45115316
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||   | ||||||||||||| |||||||||||||||||||    
T  45115262 aatgaatgaatctaaaatgtagatttttgcttataatagtgaccggagggtgtat 45115316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 48022687 - 48022741
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||| |||| ||||   ||||||||||||||||||||||||||||||||||    
T  48022687 aatgaatgtatcttaaaagtgaatttttgcttatattagtgaccggagggtgtat 48022741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 639891 - 639944
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||| |||| ||||   |||||||||||||||||||||||||||||||||    
T  639891 aatgaatgtatcttaaaagtgaatttttgcttatattagtgaccggagggtgta 639944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 4060267 - 4060316
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||| |||||||||  | ||||||||||||||||||||||||||||||||    
T  4060267 aatgtatctaaaaagtagatttttgcttatattagtgaccggagggtgta 4060316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 5431434 - 5431479
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggag 49  Q
    ||||||||||||||||   |||||||||||||||||||||||||||    
T  5431434 tgaatgaatctaaaaagttaatttttgcttatattagtgaccggag 5431479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 14214596 - 14214543
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||||| |||||||   |||||||||||||| ||||||||||||||||||||    
T  14214596 tgaatgaacctaaaaagtgaatttttgcttataatagtgaccggagggtgtatt 14214543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 36486583 - 36486534
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||| | ||||||||||||||| |||||| |||||||||||    
T  36486583 aatgaatctaaaatctaaatttttgcttatagtagtgaacggagggtgta 36486534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 39216149 - 39216096
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    ||||||| |||||||  |||| ||||||||||| ||||||||||||||||||||    
T  39216149 tgaatgagtctaaaatgcaaagttttgcttataatagtgaccggagggtgtatt 39216096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 6065507 - 6065455
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||| |||||||||  | | |||||||||||||||||||||||||||||||    
T  6065507 tgaatgtatctaaaaagtagaattttgcttatattagtgaccggagggtgtat 6065455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 6065575 - 6065607
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||||||||||||||    
T  6065575 atttttgcttatattagtgaccggagggtgtat 6065607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 8984282 - 8984334
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||  | |||||||||||||||| || ||||||||||||||    
T  8984282 tgaatgaatctaaaatacgaatttttgcttatatttgtcaccggagggtgtat 8984334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 14214623 - 14214675
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||| |||||||  || |||||||||||| |||||||||||||||||||    
T  14214623 tgaatgaacctaaaaagtaagtttttgcttataatagtgaccggagggtgtat 14214675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 14418151 - 14418203
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||| |||||||||   ||||||||||||||||| ||||||||||||||||    
T  14418151 tgaatgtatctaaaaagtgaatttttgcttatattaatgaccggagggtgtat 14418203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 15351761 - 15351709
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||| |||||   ||||||||||||||||| |||||||||||||||||    
T  15351761 tgaatgaatttaaaatataaatttttgcttatatttgtgaccggagggtgtat 15351709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 19175682 - 19175734
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||  | ||||||||||||| ||||||| |||||||||||    
T  19175682 tgaatgaatctaaaaagtagatttttgcttataatagtgactggagggtgtat 19175734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 27206873 - 27206905
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||||||||||||||    
T  27206873 atttttgcttatattagtgaccggagggtgtat 27206905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 28725581 - 28725613
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||||||||||||||||||||||||||||||    
T  28725581 tttttgcttatattagtgaccggagggtgtatt 28725613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 33604105 - 33604137
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||||||||||||||    
T  33604105 atttttgcttatattagtgaccggagggtgtat 33604137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 40262580 - 40262612
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||||||||||||||    
T  40262580 atttttgcttatattagtgaccggagggtgtat 40262612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 48022621 - 48022589
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||||||||||||||    
T  48022621 atttttgcttatattagtgaccggagggtgtat 48022589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 55
Target Start/End: Complemental strand, 639825 - 639794
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||||||||||||||||    
T  639825 atttttgcttatattagtgaccggagggtgta 639794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 1409143 - 1409190
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggaggg 51  Q
    ||||||||||||||||   |||||||||||||| ||||||||||||||    
T  1409143 tgaatgaatctaaaaagataatttttgcttataatagtgaccggaggg 1409190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 8257989 - 8257938
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||| |||||||||   |||||||||||||||| ||||||||||||||||    
T  8257989 tgaatgtatctaaaaagtgaatttttgcttatatttgtgaccggagggtgta 8257938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 23575342 - 23575307
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtatttaa 60  Q
    ||||||||||||||||||||||||||||||| ||||    
T  23575342 tttttgcttatattagtgaccggagggtgtacttaa 23575307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Complemental strand, 36040171 - 36040140
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||||||||||||||    
T  36040171 tttttgcttatattagtgaccggagggtgtat 36040140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Original strand, 36040261 - 36040292
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||||||||||||||    
T  36040261 tttttgcttatattagtgaccggagggtgtat 36040292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39075999 - 39076054
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||  |||| ||||||||||| |||||||| |||| |||||    
T  39075999 taatgaatgaatctaaaattcaaacttttgcttatactagtgacccgaggatgtat 39076054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Original strand, 41161580 - 41161611
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||||||||||||||    
T  41161580 tttttgcttatattagtgaccggagggtgtat 41161611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 48083598 - 48083649
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||   ||| ||||||||||||||||||| ||||||||||    
T  48083598 tgaatgaatctaaaatataaagttttgcttatattagtgactggagggtgta 48083649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1602908 - 1602962
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||| |||||||   |||||||||||||| ||||||| ||||||||||    
T  1602908 taatgaatgaacctaaaaaatgaatttttgcttataatagtgactggagggtgta 1602962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 2352991 - 2353041
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||| |||||||||  |||||||||||||||||||||| |||| |||||||    
T  2352991 aatgtatctaaaaaataaatttttgcttatattagtgatcggaaggtgtat 2353041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Complemental strand, 6283560 - 6283530
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||||||||||||||||    
T  6283560 tttttgcttatattagtgaccggagggtgta 6283530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 8338723 - 8338673
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggt 52  Q
    |||||||||||||||||   | ||||||||||||| |||||||||||||||    
T  8338723 aatgaatgaatctaaaatgtagatttttgcttataatagtgaccggagggt 8338673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9590793 - 9590739
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||  |||| ||||||||||| |||||| ||||| |||||    
T  9590793 taatgaatgaatctaaaatgcaaaattttgcttataatagtgatcggagagtgta 9590739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23398468 - 23398414
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||    | |||||||||||| ||||||||||||||||||    
T  23398468 taatgaatgaatctaaaatgttagtttttgcttataatagtgaccggagggtgta 23398414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Complemental strand, 28725491 - 28725461
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||||||||||||||||    
T  28725491 tttttgcttatattagtgaccggagggtgta 28725461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Complemental strand, 33939322 - 33939292
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||||||||||||||||    
T  33939322 tttttgcttatattagtgaccggagggtgta 33939292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 39515061 - 39515111
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||| ||||   ||||||||||||||||||||||||||||| ||||    
T  39515061 aatgaatctgaaaagtgaatttttgcttatattagtgaccggagggagtat 39515111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 5431387 - 5431342
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggag 49  Q
    ||||||||||||||||   |||||||||||||| ||||||||||||    
T  5431387 tgaatgaatctaaaaagtgaatttttgcttataatagtgaccggag 5431342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 17490514 - 17490481
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtatt 57  Q
    ||||||||||||||||||||||||||||| ||||    
T  17490514 atttttgcttatattagtgaccggagggtctatt 17490481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 33604039 - 33603986
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||| |||| ||||   |||||||| ||||||||||||||||||||||||    
T  33604039 aatgaatgtatcttaaaagtgaatttttgtttatattagtgaccggagggtgta 33603986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 34658413 - 34658376
Alignment:
Q  23 aatttttgcttatattagtgaccggagggtgtatttaa 60  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  34658413 aatttttgcttatattagtgaccggatggtgtaattaa 34658376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 34953990 - 34954039
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtg 53  Q
    |||||||||||||||   ||||||||||||||| |||||| |||||||||    
T  34953990 tgaatgaatctaaaatataaatttttgcttataatagtgatcggagggtg 34954039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 1035933 - 1035881
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||| ||||   |||||||||||||||||||| |||| |||||||    
T  1035933 tgaatgaatctagaaactggatttttgcttatattagtgatcggatggtgtat 1035881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3013701 - 3013753
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtg 53  Q
    |||||||||||| |||||    |||||||||||||| ||||||||||||||||    
T  3013701 taatgaatgaatgtaaaatgttaatttttgcttataatagtgaccggagggtg 3013753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 6758592 - 6758540
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||| |||||  |||| ||||||||||| ||||||||||||| |||||    
T  6758592 tgaatgaatgtaaaatgcaaagttttgcttataatagtgaccggaggatgtat 6758540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 31008373 - 31008405
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||| ||||||||||||||||    
T  31008373 atttttgcttatattaatgaccggagggtgtat 31008405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 51
Target Start/End: Complemental strand, 37734800 - 37734772
Alignment:
Q  23 aatttttgcttatattagtgaccggaggg 51  Q
    |||||||||||||||||||||||||||||    
T  37734800 aatttttgcttatattagtgaccggaggg 37734772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 46906910 - 46906862
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggag 49  Q
    ||||||||||||||||||   | ||||||||||||| ||||||||||||    
T  46906910 taatgaatgaatctaaaatatagatttttgcttataatagtgaccggag 46906862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 52923369 - 52923317
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||| |||||||   || ||||||||||| |||||||||||||||||||    
T  52923369 tgaatgaacctaaaaagtgaaattttgcttataatagtgaccggagggtgtat 52923317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28702110 - 28702055
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  28702110 taatgaatgaatctaaaaatcaaacttttgcttatattagtgaccggagggtgtat 28702055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28702152 - 28702208
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    ||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||    
T  28702152 taatgaatgaacctaaaaatcaaacttttgcttatattagtgaccggagggtgtatt 28702208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34134594 - 34134649
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||    
T  34134594 taatgaatgaatctaaaaatcaaatttttacttatattagtgaccggaaggtgtat 34134649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17655100 - 17655046
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  17655100 taatgaatgaatctaaaaaccaaaattttgtttatattagtgactggagggtgta 17655046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17655153 - 17655210
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattt 58  Q
    ||||||||||||||||||| |||||||||| |||| ||||||| ||||||||||||||    
T  17655153 taatgaatgaatctaaaaatcaaatttttgtttatcttagtgatcggagggtgtattt 17655210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 21859531 - 21859484
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccgga 48  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  21859531 taatgaatgaatctaaaaatcaaatttttgtttatattagtgaccgga 21859484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 21915394 - 21915347
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccgga 48  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  21915394 taatgaatgaatctaaaaatcaaatttttgtttatattagtgaccgga 21915347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 54164907 - 54164961
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattt 58  Q
    ||||||||||||||||  | ||||||||||||| |||||||||||||||||||||    
T  54164907 tgaatgaatctaaaaaatagatttttgcttataatagtgaccggagggtgtattt 54164961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 54713146 - 54713092
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||   ||||||||||||||| |||||||||||||||||||    
T  54713146 aatgaatgaatctaaaatgtaaatttttgcttataatagtgaccggagggtgtat 54713092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 36072616 - 36072564
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||  |||| ||||||||||| |||||||||||||||||||    
T  36072616 tgaatgaatctaaaatgcaaaattttgcttataatagtgaccggagggtgtat 36072564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 13689630 - 13689681
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||   ||||||||||||||||||||||||||| |||||    
T  13689630 tgaatgaatctaaaaagtgaatttttgcttatattagtgaccggagagtgta 13689681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 19878196 - 19878145
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggt 52  Q
    ||||||||||||||||||    ||||||||||||||||||||||||||||||    
T  19878196 taatgaatgaatctaaaatgttaatttttgcttatattagtgaccggagggt 19878145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 55087805 - 55087856
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||| |||||||||  | ||||||||||||||||||||||||||||||||    
T  55087805 tgaatgtatctaaaaattagatttttgcttatattagtgaccggagggtgta 55087856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 5281229 - 5281283
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattt 58  Q
    |||||| |||||||||   ||||||| ||||||||||||||||||||||||||||    
T  5281229 tgaatgtatctaaaaagtgaatttttacttatattagtgaccggagggtgtattt 5281283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 35151710 - 35151652
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattta 59  Q
    ||||||||||||||||||   ||| |||| |||||| ||||||||||||||||||||||    
T  35151710 taatgaatgaatctaaaatataaaattttacttataatagtgaccggagggtgtattta 35151652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 5418611 - 5418660
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||| |||||||||  |||||||||||||||||||||| |||||||||||    
T  5418611 aatgtatctaaaaagtaaatttttgcttatattagtgatcggagggtgta 5418660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 26920717 - 26920664
Alignment:
Q  5 gaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattt 58  Q
    ||||||||||||||  |||| ||||||||||| ||||||||||| |||||||||    
T  26920717 gaatgaatctaaaatacaaaattttgcttataatagtgaccggatggtgtattt 26920664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 56328542 - 56328595
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||   |  |||||||||||||||||||||||||||||||    
T  56328542 aatgaatgaatctaaaatgtagttttttgcttatattagtgaccggagggtgta 56328595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 19934732 - 19934784
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||  | ||||||||||||| |||||| ||||||||||||    
T  19934732 tgaatgaatctaaaaaatagatttttgcttataatagtgatcggagggtgtat 19934784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Complemental strand, 21884043 - 21884012
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||||||||||||||    
T  21884043 tttttgcttatattagtgaccggagggtgtat 21884012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 29006881 - 29006830
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||  | ||||||||||||| ||||||||||| ||||||    
T  29006881 tgaatgaatctaaaaaatagatttttgcttataatagtgaccggatggtgta 29006830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33376182 - 33376127
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||  |||| ||||||||||| |||||| ||||| ||||||    
T  33376182 taatgaatgaatctaaaatgcaaagttttgcttataatagtgatcggagagtgtat 33376127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Original strand, 49481995 - 49482026
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||||||||||||||    
T  49481995 tttttgcttatattagtgaccggagggtgtat 49482026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 55
Target Start/End: Original strand, 52817681 - 52817712
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||||||||||||||||    
T  52817681 atttttgcttatattagtgaccggagggtgta 52817712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Complemental strand, 56328474 - 56328443
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||||||||||||||    
T  56328474 tttttgcttatattagtgaccggagggtgtat 56328443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 14451005 - 14450951
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||   | ||||||||||||| |||||| ||||||||||||    
T  14451005 aatgaatgaatctaaaatgtagatttttgcttataatagtgatcggagggtgtat 14450951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 20294523 - 20294573
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggt 52  Q
    |||||||||| ||||||   |||||||||||||||||| ||||||||||||    
T  20294523 aatgaatgaacctaaaatgtaaatttttgcttatattaatgaccggagggt 20294573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 52817615 - 52817561
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||| |||| ||||   ||||||||||||||| ||||||||||||||||||    
T  52817615 aatgaatgtatcttaaaagtgaatttttgcttatatcagtgaccggagggtgtat 52817561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38382025 - 38381976
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagg 50  Q
    |||| |||||||||||||   ||||||||||||||| |||||||||||||    
T  38382025 taatcaatgaatctaaaatgtaaatttttgcttataatagtgaccggagg 38381976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 44156096 - 44156145
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||| |||||||||   |||||||||||||||||||||| ||||||||||    
T  44156096 aatgtatctaaaaagtgaatttttgcttatattagtgacaggagggtgta 44156145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 49481928 - 49481875
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||   ||| ||||||||||| ||||||||||||| ||||    
T  49481928 aatgaatgaatctaaaatgtaaacttttgcttataatagtgaccggaggatgta 49481875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 6126767 - 6126799
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||||||||| ||||||||||||||||||||    
T  6126767 tttttgcttataatagtgaccggagggtgtatt 6126799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 13689582 - 13689538
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccgga 48  Q
    |||||| |||||||||  | |||||||||||||||||||||||||    
T  13689582 tgaatgtatctaaaaaatagatttttgcttatattagtgaccgga 13689538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 19934684 - 19934632
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||    | ||||||||||| |||||||||||||||||||    
T  19934684 tgaatgaatctaaaaagtggaattttgcttataatagtgaccggagggtgtat 19934632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 20788126 - 20788182
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    ||||||||||| ||| |||   |||||||||||||| ||||||||||||| ||||||    
T  20788126 taatgaatgaacctagaaaatgaatttttgcttataatagtgaccggaggatgtatt 20788182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23568471 - 23568523
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtg 53  Q
    ||||||||||||||||||    | |||||||||||| ||||||||||||||||    
T  23568471 taatgaatgaatctaaaatgttagtttttgcttataatagtgaccggagggtg 23568523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 52281164 - 52281112
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||| |||||  || ||||||||||||| ||||||||||| |||||||    
T  52281164 tgaatgaatataaaatgcatatttttgcttataatagtgaccggatggtgtat 52281112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 52674911 - 52674963
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||   | ||||||||||||||| |||||| ||||||||||    
T  52674911 tgaatgaatctaaaacatacatttttgcttatatttgtgaccagagggtgtat 52674963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 54164859 - 54164807
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||    | ||||||||||| |||||||||||||||||||    
T  54164859 tgaatgaatctaaaaagtggaattttgcttataatagtgaccggagggtgtat 54164807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22456271 - 22456325
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  22456271 taatgaatgaatctaaaaatcaaatttttgctgatattagtgaccggagggtgta 22456325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 40470509 - 40470563
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  40470509 taatgaatgaatctaaaaatcaaacttttgcttatattagtgaccggagggtgta 40470563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40470467 - 40470413
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  40470467 taatgaatgaatctaaaaattaaatttttgcttatattagtgaccgaagggtgta 40470413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26143539 - 26143594
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||| |||||| |||| ||||| |||||||||||||||||||||||||    
T  26143539 taatgaatgaatttaaaaatcaaacttttgtttatattagtgaccggagggtgtat 26143594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43818911 - 43818857
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||  |||| ||||||||||| ||||||||||||||||||    
T  43818911 taatgaatgaatctaaaatgcaaaattttgcttatagtagtgaccggagggtgta 43818857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 52168327 - 52168278
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  52168327 aatgtatctaaaaagtaaatttttgcttatattagtgaccggagggtgta 52168278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 10872766 - 10872818
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||   ||||||||||||||| |||||||||||||||||||    
T  10872766 tgaatgaatctaaaatataaatttttgcttataatagtgaccggagggtgtat 10872818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 51239337 - 51239389
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||| |||||||||  | |||||||||||||||||||||||||||||||||    
T  51239337 tgaatgtatctaaaaaatagatttttgcttatattagtgaccggagggtgtat 51239389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 331889 - 331944
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||    |||||||||||||| |||||||||||||||||||    
T  331889 taatgaatgaatctaaaatgttaatttttgcttataatagtgaccggagggtgtat 331944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 17552504 - 17552469
Alignment:
Q  23 aatttttgcttatattagtgaccggagggtgtattt 58  Q
    ||||||||||||||||||||||||||||||||||||    
T  17552504 aatttttgcttatattagtgaccggagggtgtattt 17552469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 5919479 - 5919425
Alignment:
Q  4 tgaatgaatctaaaa-accaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    ||||||||||||||| || || |||||||||||||| ||||||||||||||||||    
T  5919479 tgaatgaatctaaaatacgaattttttgcttatatttgtgaccggagggtgtatt 5919425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 30578313 - 30578371
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattta 59  Q
    ||||||||||||||||||  |||| ||||||||||| ||||||| |||||||| |||||    
T  30578313 taatgaatgaatctaaaatacaaagttttgcttataatagtgacaggagggtgcattta 30578371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 8439350 - 8439403
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||| ||||||   || |||||||||||||||||||||||||||||||    
T  8439350 aatgaatgaacctaaaatataattttttgcttatattagtgaccggagggtgta 8439403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 8504898 - 8504845
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||   | ||||||||||||| ||||||||||||||||||    
T  8504898 aatgaatgaatctaaaatgtagatttttgcttataatagtgaccggagggtgta 8504845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 38455261 - 38455310
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||| |||||||||  ||||||||| ||||||||||||||||||||||||    
T  38455261 aatgtatctaaaaagtaaatttttgtttatattagtgaccggagggtgta 38455310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 38677613 - 38677560
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||   ||| ||||||||||| ||||||||||||||||||    
T  38677613 aatgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgta 38677560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 50261049 - 50261082
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtattt 58  Q
    ||||||||||||||||||||||||||||||||||    
T  50261049 tttttgcttatattagtgaccggagggtgtattt 50261082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 7601960 - 7601908
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||  |||| ||||||||||| |||||| ||||||||||||    
T  7601960 tgaatgaatctaaaattcaaagttttgcttataatagtgatcggagggtgtat 7601908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 41349687 - 41349655
Alignment:
Q  23 aatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||||||||||||||||||    
T  41349687 aatttttgcttatattagtgaccggagggtgta 41349655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 51239269 - 51239237
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||||||||||||||    
T  51239269 atttttgcttatattagtgaccggagggtgtat 51239237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 51617447 - 51617479
Alignment:
Q  26 ttttgcttatattagtgaccggagggtgtattt 58  Q
    |||||||||||||||||||||||||||||||||    
T  51617447 ttttgcttatattagtgaccggagggtgtattt 51617479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 9170157 - 9170106
Alignment:
Q  5 gaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||   || |||||||||||| |||||||||||||||||||    
T  9170157 gaatgaatctaaaatgtaattttttgcttataatagtgaccggagggtgtat 9170106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 232
Target Start/End: Complemental strand, 9720184 - 9720149
Alignment:
Q  197 ttaagttgtttatgcactttacagtatatatttaat 232  Q
    ||||||||||||||||||||| ||||||||||||||    
T  9720184 ttaagttgtttatgcactttatagtatatatttaat 9720149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 9720295 - 9720228
Alignment:
Q  54 tatttaagatttgagattttaagtcgattatgtttaaggtttgccactagtttgttttatgtataaga 121  Q
    |||||||||||||||| ||| ||||| ||   |||||  ||||||||||||||||||||||| |||||    
T  9720295 tatttaagatttgagactttgagtcgtttccttttaacctttgccactagtttgttttatgtttaaga 9720228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12708737 - 12708682
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||| ||| |||   |||||||||||||| |||||||||||||||||||    
T  12708737 taatgaatgaacctagaaaatgaatttttgcttataatagtgaccggagggtgtat 12708682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 55
Target Start/End: Original strand, 21404008 - 21404039
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||||||||||||||||    
T  21404008 atttttgcttatattagtgaccggagggtgta 21404039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22497000 - 22496945
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||    |||||||||||||| ||||||| |||||||||||    
T  22497000 taatgaatgaatctaaaatattaatttttgcttataatagtgactggagggtgtat 22496945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26244471 - 26244526
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||| |||||||||  |||| |||||| |||| |||||||||||||||||||    
T  26244471 taatgaataaatctaaaatgcaaaattttgcctataatagtgaccggagggtgtat 26244526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 55
Target Start/End: Complemental strand, 29565135 - 29565104
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||||||||||||||||    
T  29565135 atttttgcttatattagtgaccggagggtgta 29565104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34063804 - 34063761
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgac 44  Q
    |||||||| ||| |||||| ||||||||||||||||||||||||    
T  34063804 taatgaataaatttaaaaaacaaatttttgcttatattagtgac 34063761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 55
Target Start/End: Complemental strand, 36362630 - 36362599
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||||||||||||||||    
T  36362630 atttttgcttatattagtgaccggagggtgta 36362599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Original strand, 38677680 - 38677711
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||||||||||||||    
T  38677680 tttttgcttatattagtgaccggagggtgtat 38677711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 55
Target Start/End: Original strand, 41349775 - 41349806
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||||||||||||||||    
T  41349775 atttttgcttatattagtgaccggagggtgta 41349806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 43818944 - 43818991
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccgga 48  Q
    ||||||||||||||||||  |||| ||||||||||| |||||||||||    
T  43818944 taatgaatgaatctaaaatgcaaagttttgcttataatagtgaccgga 43818991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7882330 - 7882276
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||| |||||||||||||    |||||||||||||| ||||||||||||||||||    
T  7882330 taattaatgaatctaaaatgttaatttttgcttataatagtgaccggagggtgta 7882276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Complemental strand, 25881161 - 25881131
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||||||||||||||||    
T  25881161 tttttgcttatattagtgaccggagggtgta 25881131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Original strand, 25881251 - 25881281
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||||||||||||||||    
T  25881251 tttttgcttatattagtgaccggagggtgta 25881281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27224671 - 27224725
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||| |||||||||  | |||||||||||||| |||| |||||||||||||    
T  27224671 taatgaatcaatctaaaatgctaatttttgcttataatagtaaccggagggtgta 27224725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 12744947 - 12744894
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||||||||||||   || |||||||||||| ||||||||||||||| ||||    
T  12744947 tgaatgaatctaaaatgtaagtttttgcttataatagtgaccggagggtctatt 12744894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21217215 - 21217166
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagg 50  Q
    ||||||||||||||||||   | ||||||||||||| |||||||||||||    
T  21217215 taatgaatgaatctaaaatgtagatttttgcttataatagtgaccggagg 21217166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 26104822 - 26104773
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggaggg 51  Q
    |||||||||| ||||||   |||||||||||||||||||||||| |||||    
T  26104822 aatgaatgaacctaaaatgtaaatttttgcttatattagtgaccagaggg 26104773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 29512227 - 29512276
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||| |||||||||  |||||||||||||| ||||| |||||||||||||    
T  29512227 aatgtatctaaaaaataaatttttgcttatgttagtaaccggagggtgta 29512276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 52
Target Start/End: Original strand, 29720189 - 29720218
Alignment:
Q  23 aatttttgcttatattagtgaccggagggt 52  Q
    ||||||||||||||||||||||||||||||    
T  29720189 aatttttgcttatattagtgaccggagggt 29720218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 51617357 - 51617324
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtatt 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  51617357 atttttggttatattagtgaccggagggtgtatt 51617324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 52931668 - 52931635
Alignment:
Q  23 aatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||||||||| ||||||    
T  52931668 aatttttgcttatattagtgaccggagtgtgtat 52931635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 2128455 - 2128507
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||    |||||||||||||| ||||||| |||||||||||    
T  2128455 tgaatgaatctaaaacatgaatttttgcttataatagtgactggagggtgtat 2128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 10872698 - 10872662
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtatttaa 60  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  10872698 atttttgcttataatagtgactggagggtgtatttaa 10872662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 26367497 - 26367465
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||| |||||||||||||||||    
T  26367497 atttttgcttatatttgtgaccggagggtgtat 26367465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 33412579 - 33412611
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||| |||||||||||    
T  33412579 atttttgcttatattagtgactggagggtgtat 33412611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 36566729 - 36566773
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccgga 48  Q
    ||||||||||||||||  ||| ||||||||||| |||||||||||    
T  36566729 tgaatgaatctaaaaagaaaacttttgcttataatagtgaccgga 36566773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 38455191 - 38455159
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||| ||||||||||||||||    
T  38455191 atttttgcttatattaatgaccggagggtgtat 38455159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 45736713 - 45736681
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||| |||||||||||||||||||    
T  45736713 atttttgcttataatagtgaccggagggtgtat 45736681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 50260959 - 50260927
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||| ||||||||||||||    
T  50260959 atttttgcttatattagtaaccggagggtgtat 50260927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 52215923 - 52215875
Alignment:
Q  7 atgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||   ||||||||||||||| ||||||||||||| ||||    
T  52215923 atgaatctaaaatgtaaatttttgcttataatagtgaccggaggatgta 52215875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17087404 - 17087347
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattt 58  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||    
T  17087404 taatgaatgaatctaaaaatcaaacttttgcttatattagtgaccggaggatgtattt 17087347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42749104 - 42749047
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattt 58  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||    
T  42749104 taatgaatgaatctaaaaatcaaacttttgcttatattagtgaccggaggatgtattt 42749047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13029405 - 13029456
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggt 52  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  13029405 taatgaatgaatctaaaaatcaaacttttgcttatattagtgaccggagggt 13029456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 17087438 - 17087487
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagg 50  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  17087438 taatgaatgaatctaaaaatcaaacttttgcttatattagtgaccggagg 17087487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9879006 - 9879058
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtg 53  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  9879006 taatgaatgaatctaaaaatcaaacgtttgcttatattagtgaccggagggtg 9879058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 40640327 - 40640271
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    ||||||||||||||||||  |||| ||||||||||| ||||||||||||||||||||    
T  40640327 taatgaatgaatctaaaatacaaagttttgcttataatagtgaccggagggtgtatt 40640271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 92929 - 92984
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||| |||||||||| |||| |||||||||||||||||||||||| ||||||    
T  92929 taatgaataaatctaaaaatcaaacttttgcttatattagtgaccggagagtgtat 92984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 1739659 - 1739710
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||| |||||||||  ||||||||||||||||||||||||||||||||||    
T  1739659 tgaatgtatctaaaaagtaaatttttgcttatattagtgaccggagggtgta 1739710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9878964 - 9878909
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||| |||||||||    
T  9878964 taatgaatgaatctaaaaatcaaacatttgcttatattagtgaccgcagggtgtat 9878909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24287834 - 24287779
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||  |||| ||||||||||| |||||||||||||||||||    
T  24287834 taatgaatgaatctaaaatgcaaagttttgcttataatagtgaccggagggtgtat 24287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 33070257 - 33070310
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||  |||| ||||||||||| ||||||||||||||||||    
T  33070257 aatgaatgaatctaaaatgcaaaattttgcttataatagtgaccggagggtgta 33070310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 40098806 - 40098753
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||| |||||||||  | ||||||||||||||||||||||||||||||||||    
T  40098806 tgaatgtatctaaaaagtagatttttgcttatattagtgaccggagggtgtatt 40098753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 92888 - 92837
Alignment:
Q  5 gaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||| |||||||||| |||| ||||||||||||||||||| |||||||||||    
T  92888 gaattaatctaaaaatcaaacttttgcttatattagtgacaggagggtgtat 92837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 31810426 - 31810481
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||||||||||||||   |  |||||||||||||||||||||||||||||||||    
T  31810426 aatgaatgaatctaaaatgtagttttttgcttatattagtgaccggagggtgtatt 31810481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 13496527 - 13496581
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||| |||||   ||||||||||||||| |||||||||||||||||||    
T  13496527 aatgaatgaatttaaaatgtaaatttttgcttataatagtgaccggagggtgtat 13496581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 31505063 - 31505029
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtattta 59  Q
    |||||||||||||||||||||||||||||||||||    
T  31505063 tttttgcttatattagtgaccggagggtgtattta 31505029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 33070214 - 33070160
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||  |||| |||||||||||  |||||||||||||||||    
T  33070214 taatgaatgaatctaaaatacaaagttttgcttataacagtgaccggagggtgta 33070160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 9056117 - 9056166
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||| |||||||||   |||||||||||||||||||||||||||||||||    
T  9056117 aatgtatctaaaaagtgaatttttgcttatattagtgaccggagggtgta 9056166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 23627714 - 23627661
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||| |||||||||  || ||||||||||||| ||||||||||||||||||    
T  23627714 aatgaataaatctaaaatacagatttttgcttataatagtgaccggagggtgta 23627661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 24053645 - 24053592
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||| ||||||   || |||||||||||||||||||||||||||||||    
T  24053645 aatgaatgaacctaaaatataattttttgcttatattagtgaccggagggtgta 24053592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 9056067 - 9056015
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||| |||||||||   |||||||||||||||| |||||||||||||||||    
T  9056067 tgaatgtatctaaaaagtgaatttttgcttatatttgtgaccggagggtgtat 9056015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 40098874 - 40098906
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||||||||||||||    
T  40098874 atttttgcttatattagtgaccggagggtgtat 40098906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 44521342 - 44521394
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||  |||| ||||||||||| |||||| ||||||||||||    
T  44521342 tgaatgaatctaaaattcaaagttttgcttataatagtgatcggagggtgtat 44521394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 55
Target Start/End: Complemental strand, 1744258 - 1744227
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||||||||||||||||    
T  1744258 atttttgcttatattagtgaccggagggtgta 1744227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 10117064 - 10117115
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||   ||||||||||||||| ||||||||||| ||||||    
T  10117064 tgaatgaatctaaaatgtaaatttttgcttataatagtgaccggatggtgta 10117115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 55
Target Start/End: Complemental strand, 14381264 - 14381233
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||||||||||||||||    
T  14381264 atttttgcttatattagtgaccggagggtgta 14381233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Original strand, 31505153 - 31505184
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||||||||||||||    
T  31505153 tttttgcttatattagtgaccggagggtgtat 31505184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10934694 - 10934748
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||     ||||||||||||| ||||||||||||||||||    
T  10934694 taatgaatgaatctaaaatgttgatttttgcttataatagtgaccggagggtgta 10934748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13029376 - 13029338
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatatta 39  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  13029376 taatgaatgaatctaaaaatcaaacttttgcttatatta 13029338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 24820391 - 24820437
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagg 50  Q
    ||||||||||||||||   |||||||||||||| |||||||||||||    
T  24820391 tgaatgaatctaaaaagagaatttttgcttataatagtgaccggagg 24820437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9232583 - 9232538
Alignment:
Q  1 taatgaatgaat-ctaaaaaccaaatttttgcttatattagtgacc 45  Q
    |||||||||||| ||||||| |||| ||||||||||||||||||||    
T  9232583 taatgaatgaattctaaaaatcaaacttttgcttatattagtgacc 9232538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 27518407 - 27518460
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||   | ||||||| ||||| ||||||||||||||||||    
T  27518407 aatgaatgaatctaaaatgtagatttttgtttataatagtgaccggagggtgta 27518460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 29424077 - 29424126
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtg 53  Q
    |||||||||||||||    |||||||||||||||| ||||||||||||||    
T  29424077 tgaatgaatctaaaatatgaatttttgcttatatttgtgaccggagggtg 29424126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 8506311 - 8506363
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||   ||||||||| ||||||| |||||||||| ||||||    
T  8506311 tgaatgaatctaaaacataaatttttgtttatatttgtgaccggagagtgtat 8506363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 13496460 - 13496428
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||||||||||||||||||||| ||||||||    
T  13496460 tttttgcttatattagtgaccggatggtgtatt 13496428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 29451757 - 29451725
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||| ||||||||||||||||||||||||||    
T  29451757 attttttcttatattagtgaccggagggtgtat 29451725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 14310613 - 14310666
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||  || ||||||||||||||||||||||||||||||||    
T  14310613 aatgaatgaatctaaaatacagatttttgcttatattagtgaccggagggtgta 14310666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 8146041 - 8146095
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||   || ||||||||||||||||||||||||||||||||    
T  8146041 aatgaatgaatctaaaatgtaattttttgcttatattagtgaccggagggtgtat 8146095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 6560749 - 6560802
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||   || |||||||||||||||||||||||||||||||    
T  6560749 aatgaatgaatctaaaatgtaattttttgcttatattagtgaccggagggtgta 6560802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 17773595 - 17773648
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||| |||||||||  | ||||||||||||||||||||||||||||||||||    
T  17773595 tgaatgtatctaaaaagtagatttttgcttatattagtgaccggagggtgtatt 17773648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 21506489 - 21506453
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtatttaa 60  Q
    |||||||||||||||||||||||||||||||||||||    
T  21506489 atttttgcttatattagtgaccggagggtgtatttaa 21506453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 6560682 - 6560648
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtattta 59  Q
    |||||||||||||||||||||||||||||||||||    
T  6560682 tttttgcttatattagtgaccggagggtgtattta 6560648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 31398318 - 31398371
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||   ||| ||||||||||| ||||||||||||||||||    
T  31398318 aatgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgta 31398371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 13277116 - 13277168
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||   ||||||||| ||||||| |||||||||||||||||    
T  13277116 tgaatgaatctaaaatataaatttttgtttatatttgtgaccggagggtgtat 13277168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 31536337 - 31536305
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||||||||||||||    
T  31536337 atttttgcttatattagtgaccggagggtgtat 31536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 13462979 - 13462928
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||| ||||||||| |||| |||||||| || ||||||||||||||||||    
T  13462979 tgaatggatctaaaaagcaaacttttgcttctaatagtgaccggagggtgta 13462928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18886357 - 18886302
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||    |||||||||||||| ||||||| |||||||||||    
T  18886357 taatgaatgaatctaaaatattaatttttgcttataatagtgactggagggtgtat 18886302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 21506557 - 21506608
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||| |||||||||  |||||||||||||||||| |||||||| ||||||    
T  21506557 tgaatgtatctaaaaattaaatttttgcttatattaatgaccggatggtgta 21506608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29215534 - 29215589
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||| |||||||||||||  |||| ||||||||||| ||||||||| |||||||||    
T  29215534 taataaatgaatctaaaatacaaaattttgcttataatagtgaccgaagggtgtat 29215589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 55
Target Start/End: Original strand, 30397838 - 30397869
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||||||||||||||||    
T  30397838 atttttgcttatattagtgaccggagggtgta 30397869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 30460714 - 30460757
Alignment:
Q  11 atctaaaaaccaaatttttgcttatattagtgaccggagggtgt 54  Q
    |||||||||  ||||||||||||||||||||||| |||||||||    
T  30460714 atctaaaaagtaaatttttgcttatattagtgactggagggtgt 30460757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Complemental strand, 8145973 - 8145943
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||||||||||||||||    
T  8145973 tttttgcttatattagtgaccggagggtgta 8145943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 28577645 - 28577595
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||| |||||||||   ||||||||||||||||||||||| ||||||||||    
T  28577645 aatgtatctaaaaaatgaatttttgcttatattagtgacctgagggtgtat 28577595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Complemental strand, 31398251 - 31398221
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||||||||||||||||    
T  31398251 tttttgcttatattagtgaccggagggtgta 31398221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 13276513 - 13276480
Alignment:
Q  23 aatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||| |||||||||||||||||    
T  13276513 aatttttgcttatatttgtgaccggagggtgtat 13276480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 18097104 - 18097055
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||   ||| ||||||||||| ||||||||||||||||||    
T  18097104 aatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgta 18097055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 18097175 - 18097208
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtattt 58  Q
    |||||| |||||||||||||||||||||||||||    
T  18097175 tttttgtttatattagtgaccggagggtgtattt 18097208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 30397751 - 30397718
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtatt 57  Q
    ||||||| ||||||||||||||||||||||||||    
T  30397751 atttttgtttatattagtgaccggagggtgtatt 30397718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 21998065 - 21998033
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||| ||||||||||||    
T  21998065 atttttgcttatattagtgatcggagggtgtat 21998033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 33053811 - 33053759
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||   | |||||| |||||||| |||||||||||||||||    
T  33053811 tgaatgaatctaaaacatagattttttcttatatttgtgaccggagggtgtat 33053759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 120239 - 120291
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  120239 tgaatgtatctaaaaagtaaatttttgcttatattagtgaccggagggtgtat 120291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 120191 - 120138
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||| |||||||||   || ||||||||||||||||||||||||||||||||    
T  120191 tgaatgtatctaaaaagtgaaattttgcttatattagtgaccggagggtgtatt 120138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20057197 - 20057252
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||| ||||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  20057197 taatggatgaatctaaaagtcaaatttttgcttatattaatgaccggagggtgtat 20057252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 19612989 - 19612935
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||   | |||||||||||||||||||||||||||||||||    
T  19612989 aatgaatgaatctaaaatatagatttttgcttatattagtgaccggagggtgtat 19612935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 38598034 - 38598087
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||| |||||||||  | ||||||||||||||||||||||||||||||||||    
T  38598034 tgaatgtatctaaaaaatagatttttgcttatattagtgaccggagggtgtatt 38598087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 5574204 - 5574256
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||| |||||||||  | |||||||||||||||||||||||||||||||||    
T  5574204 tgaatgtatctaaaaagtagatttttgcttatattagtgaccggagggtgtat 5574256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 38594438 - 38594490
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||| |||||||||  | |||||||||||||||||||||||||||||||||    
T  38594438 tgaatgtatctaaaaaatagatttttgcttatattagtgaccggagggtgtat 38594490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 43426722 - 43426774
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||| |||||||||  |||||||||||||||||| ||||||||||||||||    
T  43426722 tgaatgtatctaaaaaataaatttttgcttatattaatgaccggagggtgtat 43426774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23992467 - 23992518
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggt 52  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||| ||||||||    
T  23992467 taatgaacgaatctaaaaatcaaatttttacttatattagtgatcggagggt 23992518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 24457148 - 24457093
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||||||| ||||||   || |||||||||||||||||||||||||||||||||    
T  24457148 aatgaatgaacctaaaatgtaattttttgcttatattagtgaccggagggtgtatt 24457093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 26234116 - 26234171
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtatt 57  Q
    |||||||||||||||||   ||| ||||||||||| ||||||||||||||||||||    
T  26234116 aatgaatgaatctaaaatgtaaacttttgcttataatagtgaccggagggtgtatt 26234171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 26229536 - 26229590
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||| |||||||   |||||||||||||| ||||||||||||||||||    
T  26229536 taatgaatgaacctaaaaaatgaatttttgcttataatagtgaccggagggtgta 26229590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 26234049 - 26234015
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtattta 59  Q
    |||||||||||||||||||||||||||||||||||    
T  26234049 tttttgcttatattagtgaccggagggtgtattta 26234015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 41805320 - 41805266
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattt 58  Q
    ||||||||| |||||  |||| ||||||||||| |||||||||||||||||||||    
T  41805320 tgaatgaatttaaaatgcaaaattttgcttataatagtgaccggagggtgtattt 41805266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 38594370 - 38594338
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||||||||||||||    
T  38594370 atttttgcttatattagtgaccggagggtgtat 38594338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 38597966 - 38597934
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||||||||||||||    
T  38597966 atttttgcttatattagtgaccggagggtgtat 38597934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Complemental strand, 2060229 - 2060198
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||||||||||||||    
T  2060229 tttttgcttatattagtgaccggagggtgtat 2060198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Original strand, 2060617 - 2060648
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||||||||||||||    
T  2060617 tttttgcttatattagtgaccggagggtgtat 2060648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 3123997 - 3124052
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattta 59  Q
    |||||||||||||||    |||||||||||||||| ||||||||||| ||||||||    
T  3123997 tgaatgaatctaaaacatgaatttttgcttatatttgtgaccggaggatgtattta 3124052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 55
Target Start/End: Original strand, 3887947 - 3887978
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||||||||||||||||    
T  3887947 atttttgcttatattagtgaccggagggtgta 3887978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15119826 - 15119771
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||    |||||||||||||| ||||||||| |||||||||    
T  15119826 taatgaatgaatctaaaatgttaatttttgcttataatagtgaccgaagggtgtat 15119771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 15446825 - 15446774
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||| ||||||   |||||||||||||| ||||||||||||||||||    
T  15446825 tgaatgaatttaaaaaatgaatttttgcttataatagtgaccggagggtgta 15446774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23992424 - 23992369
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||| |||||| |||| ||||| |||||||||||| |||| |||||||    
T  23992424 taatgaatgaatttaaaaatcaaacttttgtttatattagtgatcggaaggtgtat 23992369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Original strand, 24457215 - 24457246
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||||||||||||||||    
T  24457215 tttttgcttatattagtgaccggagggtgtat 24457246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31102040 - 31102095
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||||||||||  |||| ||||||||||| || ||| ||||||||||||    
T  31102040 taatgaatgaatctaaaatgcaaacttttgcttataataatgatcggagggtgtat 31102095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 32316467 - 32316412
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    ||||||||||| ||| |||   |||||||||||||| |||||||||||||||||||    
T  32316467 taatgaatgaacctagaaaatgaatttttgcttataatagtgaccggagggtgtat 32316412  T

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Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 44274635 - 44274682
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggaggg 51  Q
    ||||||||||||||||   ||||||||||||||| |||||||||||||    
T  44274635 tgaatgaatctaaaaagtgaatttttgcttatatcagtgaccggaggg 44274682  T

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Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 56
Target Start/End: Complemental strand, 1981009 - 1980979
Alignment:
Q  26 ttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||||||||||||    
T  1981009 ttttgcttatattagtgaccggagggtgtat 1980979  T

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Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 3887879 - 3887825
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattt 58  Q
    |||||| |||||||||  | |||||||||||||||||||| | ||||||||||||    
T  3887879 tgaatgtatctaaaaaatagatttttgcttatattagtgatcagagggtgtattt 3887825  T

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Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 4817090 - 4817136
Alignment:
Q  9 gaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||| |||| |||||||||||||| |||| ||||||||||    
T  4817090 gaatctaaaaatcaaacttttgcttatattaatgactggagggtgta 4817136  T

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Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 55
Target Start/End: Complemental strand, 19950142 - 19950112
Alignment:
Q  25 tttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||||||||||||||||    
T  19950142 tttttgcttatattagtgaccggagggtgta 19950112  T

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Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 31101994 - 31101944
Alignment:
Q  5 gaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||  ||||  |||||||||| ||||||||||||||||||    
T  31101994 gaatgaatctaaaatgcaaacatttgcttataatagtgaccggagggtgta 31101944  T

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Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 56
Target Start/End: Complemental strand, 37195076 - 37195046
Alignment:
Q  26 ttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||||||||||||    
T  37195076 ttttgcttatattagtgaccggagggtgtat 37195046  T

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Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3098217 - 3098266
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagg 50  Q
    ||||||||||||||||||   | ||||||||||||| |||||||||||||    
T  3098217 taatgaatgaatctaaaatgtagatttttgcttataatagtgaccggagg 3098266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 52
Target Start/End: Complemental strand, 5574137 - 5574108
Alignment:
Q  23 aatttttgcttatattagtgaccggagggt 52  Q
    ||||||||||||||||||||||||||||||    
T  5574137 aatttttgcttatattagtgaccggagggt 5574108  T

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Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 6074858 - 6074809
Alignment:
Q  6 aatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||  |||| ||||| ||||| ||||||||||||||||||    
T  6074858 aatgaatctaaaatgcaaagttttgtttataatagtgaccggagggtgta 6074809  T

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Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 9431245 - 9431192
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||| ||||||   || ||||| |||||||||||||||||||||||||    
T  9431245 aatgaatgaacctaaaatgtaattttttacttatattagtgaccggagggtgta 9431192  T

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Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 15119869 - 15119922
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||| |||||||||   | ||||||||||||| ||||||||||||||||||    
T  15119869 aatgaataaatctaaaatgtagatttttgcttataatagtgaccggagggtgta 15119922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 21488119 - 21488172
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||   || ||||||||||||||| ||||||||| |||||    
T  21488119 aatgaatgaatctaaaatgtaattttttgcttatattaatgaccggagagtgta 21488172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 25270947 - 25270996
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagg 50  Q
    ||||||||||||||||||   | ||||||||||||| |||||||||||||    
T  25270947 taatgaatgaatctaaaatgtagatttttgcttataatagtgaccggagg 25270996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 38465815 - 38465782
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtatt 57  Q
    ||||||||||||| ||||||||||||||||||||    
T  38465815 atttttgcttataatagtgaccggagggtgtatt 38465782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 26003461 - 26003425
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtatttaa 60  Q
    ||||||||||||| | |||||||||||||||||||||    
T  26003461 atttttgcttataattgtgaccggagggtgtatttaa 26003425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 30902367 - 30902407
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgac 44  Q
    |||||| |||||||||  |||||||||||||||||||||||    
T  30902367 tgaatgtatctaaaaagtaaatttttgcttatattagtgac 30902407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 34248529 - 34248561
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||| ||||||||||    
T  34248529 atttttgcttatattagtgaccagagggtgtat 34248561  T

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Target: scaffold0536 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 4044 - 4095
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||| |||||||||  |||||||||||||||||||||||| |||||||||    
T  4044 tgaatgtatctaaaaagtaaatttttgcttatattagtgaccagagggtgta 4095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 55
Target Start/End: Complemental strand, 3976 - 3945
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||||||||||||||||||||||||    
T  3976 atttttgcttatattagtgaccggagggtgta 3945  T

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Target: scaffold0047 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 61189 - 61155
Alignment:
Q  24 atttttgcttatattagtgaccggagggtgtattt 58  Q
    |||||||||||||||||||||||||||||||||||    
T  61189 atttttgcttatattagtgaccggagggtgtattt 61155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 246841 - 246787
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattt 58  Q
    |||||| |||||||||  |||||||||||||||||||||||| || |||||||||    
T  246841 tgaatgtatctaaaaagtaaatttttgcttatattagtgaccagacggtgtattt 246787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 246889 - 246941
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||| |||||||||  | |||||||||||||||| ||||| ||||||||||    
T  246889 tgaatgtatctaaaaagtagatttttgcttatattaatgaccagagggtgtat 246941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24697 - 24750
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgt 54  Q
    ||||||||||||||||||    |||||||||||||| |||||||||||||||||    
T  24697 taatgaatgaatctaaaatattaatttttgcttataatagtgaccggagggtgt 24750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 6261 - 6205
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtattt 58  Q
    |||||||||||| ||||   || |||||||||||||||||||| |||||||||||||    
T  6261 aatgaatgaatcgaaaatgtaattttttgcttatattagtgactggagggtgtattt 6205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 54434 - 54382
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgtat 56  Q
    |||||| |||||||||  | |||||||||||||||||| ||||||||||||||    
T  54434 tgaatgtatctaaaaagtagatttttgcttatattagtaaccggagggtgtat 54382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0631 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 4393 - 4342
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||   ||| ||||||||||||||||||| ||||||||||    
T  4393 tgaatgaatctaaaatataaagttttgcttatattagtgactggagggtgta 4342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4464 - 4518
Alignment:
Q  1 taatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||| ||| |||   |||||||||||||| ||||||||||||||||||    
T  4464 taatgaatgaacctagaaaatgaatttttgcttataatagtgaccggagggtgta 4518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 56
Target Start/End: Complemental strand, 17191 - 17161
Alignment:
Q  26 ttttgcttatattagtgaccggagggtgtat 56  Q
    |||||||||||||||||||||||||||||||    
T  17191 ttttgcttatattagtgaccggagggtgtat 17161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 139344 - 139291
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    ||||||||||| ||||||  | ||||||||||||| ||||||||| ||||||||    
T  139344 aatgaatgaatgtaaaaaatagatttttgcttataatagtgaccgaagggtgta 139291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 139388 - 139441
Alignment:
Q  2 aatgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||||   || ||||||||||||| |||||| ||||||||||    
T  139388 aatgaatgaatctaaaatgtaattttttgcttatatgagtgacgggagggtgta 139441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 17329 - 17378
Alignment:
Q  4 tgaatgaatctaaaaaccaaatttttgcttatattagtgaccggagggtgta 55  Q
    |||||||||||||||  || ||||||||||||||| || |||||||||||||    
T  17329 tgaatgaatctaaaa--catatttttgcttatatttgtaaccggagggtgta 17378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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