View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14745_low_16 (Length: 264)
Name: NF14745_low_16
Description: NF14745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14745_low_16 |
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Alignment Details
Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 42748190 - 42747955
Alignment:
| Q |
11 |
cacagaagataggcaaaaggtatttacatacctcacaatttttctaacaatcatttttccaattcccattctcctcaaggatggaataacctgcaagaca |
110 |
Q |
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| T |
42748190 |
cacagaagataggcaaaaggtatttacatacctcacaatttttctaacaatcatttttccaattcccattctcctcaaggatggaataacctgcaagaca |
42748091 |
T |
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| Q |
111 |
ctgaagtatgttgaataatgcccgtcaactatgggaaaacgcaaaatttaatatcctcaaatcaattccaaaaattgaaaaggggaaacacaaaacatgt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42748090 |
ctgaagtatgttgaataatgcccgtcaactatgggaaaacgcaaaattcaatatcctcaaatcaattccaaaaattgaaaaggggaaacacaaaacatgt |
42747991 |
T |
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| Q |
211 |
ttttcattaacaagtacttgtagatatagcctatag |
246 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
42747990 |
ttttcattaacaagtacttgtagatatagcctatag |
42747955 |
T |
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