View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14746_low_14 (Length: 288)
Name: NF14746_low_14
Description: NF14746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14746_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 13 - 276
Target Start/End: Complemental strand, 19288670 - 19288404
Alignment:
| Q |
13 |
atgaagctattttgattgggcaaaataattttaggcattacttccataagcttgttagctattaatatagtca---caatcttatcaatcacgttacaaa |
109 |
Q |
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| T |
19288670 |
atgaagctattttgattgggcaaaataattttaggcattacttccataagcttgttagctattaatatagtcatcacaatcttatcaatcacgttacaaa |
19288571 |
T |
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| Q |
110 |
gagatatgggttagaagttagaggctttagaaggttcaatacctttgggaataaaggttagttgggtgctattaacatttgtaattaactctaggttaaa |
209 |
Q |
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| T |
19288570 |
gagatatgggttagaagttagaggctttagaaggttcaatacctttgggaataaaagttagttgggtgctattaacatttgtaattaactctaggttaaa |
19288471 |
T |
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| Q |
210 |
aaataccttgtttgtaaaataaaaaatggacgagccaaaagtatcacaatttttcttgaagaaaatg |
276 |
Q |
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| T |
19288470 |
aaataccttgtttgtaaaataaaaaatggacgagccaaaagtatcccaatttttcttgaagaaaatg |
19288404 |
T |
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