View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14747_high_11 (Length: 266)

Name: NF14747_high_11
Description: NF14747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14747_high_11
NF14747_high_11
[»] chr8 (28 HSPs)
chr8 (1-163)||(22212255-22212417)
chr8 (185-262)||(9985672-9985749)
chr8 (184-250)||(40380280-40380346)
chr8 (186-262)||(20995052-20995128)
chr8 (184-262)||(23708975-23709053)
chr8 (185-250)||(9314411-9314476)
chr8 (186-262)||(43605647-43605723)
chr8 (184-262)||(27630896-27630974)
chr8 (185-262)||(34838264-34838341)
chr8 (185-253)||(13884163-13884231)
chr8 (184-262)||(9550401-9550479)
chr8 (188-262)||(14228710-14228784)
chr8 (184-262)||(18549978-18550056)
chr8 (184-262)||(22836133-22836211)
chr8 (228-262)||(25430689-25430723)
chr8 (184-222)||(30136049-30136087)
chr8 (184-222)||(40413372-40413410)
chr8 (184-222)||(42569751-42569789)
chr8 (186-219)||(42126-42159)
chr8 (186-235)||(3207432-3207481)
chr8 (185-222)||(21467384-21467421)
chr8 (185-266)||(26871046-26871127)
chr8 (185-262)||(27300346-27300423)
chr8 (217-262)||(37294626-37294671)
chr8 (185-262)||(41406850-41406927)
chr8 (206-262)||(1422717-1422773)
chr8 (189-225)||(34972208-34972244)
chr8 (186-222)||(45108691-45108727)
[»] chr3 (37 HSPs)
chr3 (185-262)||(1402650-1402727)
chr3 (184-266)||(34900639-34900721)
chr3 (185-261)||(29525233-29525309)
chr3 (184-256)||(44910696-44910768)
chr3 (184-262)||(20549379-20549457)
chr3 (184-262)||(37585429-37585508)
chr3 (184-261)||(7209-7286)
chr3 (185-262)||(30664503-30664580)
chr3 (185-262)||(49130854-49130931)
chr3 (184-250)||(8254026-8254092)
chr3 (184-262)||(32151887-32151965)
chr3 (184-253)||(49417574-49417644)
chr3 (185-262)||(14839039-14839116)
chr3 (184-260)||(41717262-41717338)
chr3 (184-247)||(44855250-44855313)
chr3 (187-262)||(47988479-47988554)
chr3 (187-262)||(47997766-47997841)
chr3 (187-262)||(48007053-48007128)
chr3 (184-222)||(1765403-1765441)
chr3 (184-222)||(3281738-3281776)
chr3 (184-262)||(9027612-9027690)
chr3 (184-262)||(24537218-24537296)
chr3 (184-262)||(40159832-40159910)
chr3 (184-222)||(43333704-43333742)
chr3 (184-222)||(46094422-46094460)
chr3 (184-262)||(46315949-46316027)
chr3 (184-250)||(50652387-50652453)
chr3 (184-221)||(6999168-6999205)
chr3 (185-250)||(11327108-11327173)
chr3 (184-225)||(14992218-14992259)
chr3 (185-222)||(30567994-30568031)
chr3 (185-266)||(37710404-37710485)
chr3 (184-260)||(7867707-7867783)
chr3 (184-260)||(8868871-8868947)
chr3 (184-260)||(36869833-36869909)
chr3 (186-222)||(40499737-40499773)
chr3 (185-252)||(55399999-55400067)
[»] chr4 (32 HSPs)
chr4 (184-262)||(45521573-45521651)
chr4 (184-262)||(6126852-6126930)
chr4 (185-262)||(36364779-36364860)
chr4 (184-262)||(36512841-36512919)
chr4 (184-262)||(41609673-41609751)
chr4 (184-262)||(50291281-50291359)
chr4 (185-262)||(24772671-24772748)
chr4 (186-262)||(6686047-6686123)
chr4 (184-262)||(29577430-29577508)
chr4 (185-262)||(36110134-36110211)
chr4 (185-262)||(39881024-39881101)
chr4 (184-260)||(34259814-34259890)
chr4 (184-260)||(44272806-44272882)
chr4 (184-250)||(3222988-3223054)
chr4 (184-262)||(4577556-4577634)
chr4 (184-262)||(17363229-17363307)
chr4 (184-262)||(37775421-37775499)
chr4 (184-222)||(38864770-38864808)
chr4 (184-222)||(41262652-41262690)
chr4 (184-250)||(44368208-44368274)
chr4 (184-266)||(46566928-46567010)
chr4 (185-250)||(3475869-3475934)
chr4 (184-253)||(5208330-5208399)
chr4 (184-253)||(8455860-8455929)
chr4 (185-222)||(17683236-17683273)
chr4 (215-260)||(18944309-18944354)
chr4 (185-262)||(25523192-25523269)
chr4 (185-253)||(30170022-30170091)
chr4 (217-262)||(32294754-32294799)
chr4 (185-266)||(40335789-40335870)
chr4 (184-225)||(56025399-56025440)
chr4 (189-225)||(24019863-24019899)
[»] chr2 (39 HSPs)
chr2 (184-262)||(18508077-18508155)
chr2 (188-262)||(3366391-3366465)
chr2 (188-262)||(43791798-43791870)
chr2 (184-262)||(12256900-12256978)
chr2 (185-266)||(5852474-5852555)
chr2 (184-222)||(15141472-15141510)
chr2 (184-266)||(36383461-36383543)
chr2 (185-262)||(14713986-14714063)
chr2 (184-253)||(23344992-23345061)
chr2 (185-266)||(31635800-31635881)
chr2 (185-262)||(44897626-44897703)
chr2 (186-222)||(8087372-8087408)
chr2 (186-253)||(26206848-26206916)
chr2 (184-262)||(34141441-34141520)
chr2 (189-260)||(43621944-43622015)
chr2 (184-218)||(2013323-2013357)
chr2 (184-262)||(4723565-4723643)
chr2 (184-262)||(11152693-11152771)
chr2 (184-262)||(12208441-12208519)
chr2 (184-250)||(27307237-27307303)
chr2 (188-262)||(28679131-28679205)
chr2 (184-266)||(29168724-29168806)
chr2 (184-222)||(29871386-29871424)
chr2 (184-262)||(30339992-30340070)
chr2 (184-250)||(35171232-35171298)
chr2 (188-262)||(38027609-38027683)
chr2 (184-262)||(42665806-42665884)
chr2 (184-253)||(44050014-44050084)
chr2 (185-250)||(3196093-3196158)
chr2 (185-262)||(5455447-5455524)
chr2 (189-222)||(11548069-11548102)
chr2 (185-262)||(11980651-11980728)
chr2 (185-262)||(17917389-17917466)
chr2 (185-262)||(42554776-42554853)
chr2 (185-222)||(43725216-43725253)
chr2 (188-225)||(45372605-45372642)
chr2 (184-256)||(4114421-4114493)
chr2 (185-252)||(6999071-6999139)
chr2 (189-225)||(12175220-12175256)
[»] chr1 (41 HSPs)
chr1 (184-262)||(2854954-2855032)
chr1 (184-262)||(17167848-17167926)
chr1 (184-262)||(32873340-32873418)
chr1 (186-262)||(5574253-5574329)
chr1 (188-247)||(16234303-16234362)
chr1 (184-253)||(34008179-34008249)
chr1 (184-253)||(51286369-51286439)
chr1 (185-262)||(12990463-12990540)
chr1 (184-259)||(7078497-7078572)
chr1 (187-266)||(51727990-51728067)
chr1 (184-262)||(21854458-21854536)
chr1 (188-250)||(34395925-34395987)
chr1 (184-266)||(37843422-37843504)
chr1 (184-262)||(40610228-40610306)
chr1 (184-250)||(42256459-42256525)
chr1 (184-253)||(47214207-47214277)
chr1 (184-252)||(32915075-32915144)
chr1 (184-259)||(11097881-11097956)
chr1 (184-250)||(29706708-29706775)
chr1 (184-223)||(29877018-29877057)
chr1 (215-262)||(48962016-48962063)
chr1 (184-250)||(18610772-18610838)
chr1 (184-262)||(19651409-19651487)
chr1 (188-222)||(24265612-24265646)
chr1 (184-222)||(24673068-24673106)
chr1 (184-250)||(29489365-29489431)
chr1 (184-222)||(35883641-35883679)
chr1 (184-222)||(37588709-37588747)
chr1 (184-262)||(41564874-41564952)
chr1 (184-262)||(44672024-44672102)
chr1 (185-262)||(46947981-46948056)
chr1 (184-253)||(52362481-52362551)
chr1 (184-252)||(10890049-10890118)
chr1 (184-253)||(12999825-12999894)
chr1 (184-252)||(15705065-15705134)
chr1 (185-266)||(30530389-30530470)
chr1 (184-221)||(34254386-34254423)
chr1 (185-252)||(13489662-13489730)
chr1 (184-260)||(27352629-27352705)
chr1 (186-253)||(33054090-33054158)
chr1 (184-251)||(45008168-45008236)
[»] chr7 (35 HSPs)
chr7 (184-262)||(27704434-27704512)
chr7 (191-253)||(10591340-10591402)
chr7 (184-262)||(48639377-48639455)
chr7 (184-266)||(4971289-4971371)
chr7 (188-253)||(11564896-11564962)
chr7 (184-250)||(27164843-27164909)
chr7 (188-266)||(37385223-37385301)
chr7 (184-253)||(40231708-40231777)
chr7 (184-262)||(41538481-41538559)
chr7 (184-262)||(41910179-41910257)
chr7 (185-250)||(2347065-2347130)
chr7 (185-262)||(26153646-26153722)
chr7 (185-261)||(40207795-40207871)
chr7 (189-225)||(46456559-46456595)
chr7 (186-222)||(49025337-49025373)
chr7 (215-262)||(47945013-47945060)
chr7 (215-262)||(47950443-47950490)
chr7 (184-250)||(116630-116696)
chr7 (184-262)||(7990078-7990156)
chr7 (184-262)||(19426579-19426657)
chr7 (184-266)||(27070659-27070740)
chr7 (184-266)||(27207573-27207654)
chr7 (184-262)||(28548215-28548293)
chr7 (184-222)||(28862104-28862142)
chr7 (185-247)||(29162288-29162350)
chr7 (184-222)||(47078273-47078311)
chr7 (189-222)||(2346951-2346984)
chr7 (185-262)||(21037228-21037305)
chr7 (185-222)||(22638918-22638955)
chr7 (184-262)||(30447357-30447437)
chr7 (185-250)||(33050183-33050248)
chr7 (185-262)||(37969931-37970008)
chr7 (186-262)||(17039158-17039234)
chr7 (189-225)||(42060800-42060836)
chr7 (184-260)||(45154536-45154611)
[»] chr5 (24 HSPs)
chr5 (185-262)||(4820155-4820232)
chr5 (184-260)||(11880983-11881059)
chr5 (184-262)||(18729283-18729361)
chr5 (184-262)||(24329976-24330054)
chr5 (184-262)||(39032598-39032676)
chr5 (186-258)||(34400619-34400691)
chr5 (186-262)||(37821119-37821195)
chr5 (185-256)||(30420626-30420697)
chr5 (184-262)||(125091-125169)
chr5 (184-262)||(3031833-3031911)
chr5 (184-266)||(12401191-12401273)
chr5 (184-262)||(12891090-12891168)
chr5 (185-247)||(15917999-15918061)
chr5 (184-253)||(19839988-19840058)
chr5 (184-222)||(22402660-22402698)
chr5 (184-262)||(34693210-34693288)
chr5 (185-266)||(1107981-1108062)
chr5 (185-222)||(9933500-9933537)
chr5 (185-218)||(19983841-19983874)
chr5 (184-249)||(35814452-35814517)
chr5 (185-252)||(6517712-6517780)
chr5 (189-225)||(10372182-10372218)
chr5 (187-262)||(14126418-14126493)
chr5 (184-260)||(29803224-29803300)
[»] scaffold0016 (1 HSPs)
scaffold0016 (184-262)||(204441-204517)
[»] scaffold0014 (1 HSPs)
scaffold0014 (184-266)||(145060-145142)
[»] scaffold0003 (1 HSPs)
scaffold0003 (184-260)||(337117-337193)
[»] scaffold0154 (1 HSPs)
scaffold0154 (184-262)||(4314-4392)
[»] scaffold0024 (1 HSPs)
scaffold0024 (188-262)||(48657-48731)
[»] chr6 (16 HSPs)
chr6 (184-250)||(27334857-27334923)
chr6 (184-250)||(27395597-27395663)
chr6 (184-253)||(15722506-15722575)
chr6 (184-260)||(32729888-32729964)
chr6 (184-251)||(34792021-34792088)
chr6 (184-218)||(2943445-2943479)
chr6 (184-250)||(3339505-3339571)
chr6 (184-266)||(16337060-16337142)
chr6 (184-250)||(17902698-17902764)
chr6 (188-262)||(21506339-21506413)
chr6 (184-222)||(30906697-30906735)
chr6 (184-252)||(18141304-18141373)
chr6 (184-252)||(20822871-20822940)
chr6 (184-225)||(25924751-25924792)
chr6 (185-262)||(27790229-27790306)
chr6 (185-252)||(35213564-35213632)
[»] scaffold0002 (1 HSPs)
scaffold0002 (185-262)||(6427-6504)
[»] scaffold0221 (1 HSPs)
scaffold0221 (184-222)||(8213-8251)
[»] scaffold0041 (1 HSPs)
scaffold0041 (188-262)||(34411-34485)
[»] scaffold0514 (1 HSPs)
scaffold0514 (185-262)||(1839-1916)
[»] scaffold0060 (1 HSPs)
scaffold0060 (185-262)||(6817-6894)


Alignment Details
Target: chr8 (Bit Score: 139; Significance: 8e-73; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 22212417 - 22212255
Alignment:
Q  1 ttagaatcagccaatttattaaacgtcgagcgagtgcaaggagcaccacaaactcgagaacagcaatacaaaaggtttccgacataccagaagacccaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| || |||||||    
T  22212417 ttagaatcagccaatttattaaacgtcgagcgagtgcaaggagcaccacaaactcgagaacagaaatataaaaggtttccgacataccataaaacccaaa 22212318  T
Q  101 ggacggcctgcaaccagccgaaaaatcgcaggttgatcctgcatatttaagccaaaggggcta 163  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22212317 ggatggcctgcaaccagccgaaaaatcgcaggctgatcctgcatatttaagccaaaggggcta 22212255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 9985749 - 9985672
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||| |||||||||||||||||  || ||| |||| ||| ||||||||||||||||||||||    
T  9985749 gagaaatgatatttgtacatctattttatgacaacttttatacaacattctctctcatactcacattatcttcttatt 9985672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 40380280 - 40380346
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| ||| |||| ||| ||||||||||    
T  40380280 agagaaatgatatttgtacatctattttatgacaacttttgtacaactttctctctcatactcacat 40380346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 20995128 - 20995052
Alignment:
Q  186 agaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||| |||||  |||||||||||| ||| ||| |||||||| ||| ||||| ||||||||||||||||    
T  20995128 agaaatgatatttatacatccattttatgacaatttttgtacaaccttctctctcatacttacattatcttcttatt 20995052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 23708975 - 23709053
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||   |||||   | |||||| ||| |||||||||||| ||||||||||||||||||||||    
T  23708975 agagaaatgatatttgtacaaccatttttgtataacttttgtacaaccttctatctcatactcacattatcttcttatt 23709053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 9314411 - 9314476
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    ||||||||||||||||||||  |||||||||||| ||| ||| |||||||| ||| ||||||||||    
T  9314411 gagaaatgatatttgtacatccattttatgacaatttttgtacaaccttctctctcatactcacat 9314476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 43605723 - 43605647
Alignment:
Q  186 agaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||  ||||  |||||||||||||| | ||| || ||||| ||| ||||||||||||||||||||||    
T  43605723 agaaatgatatttaaacatcaattttatgacaactgttgtacaatcttctctctcatactcacattatcttcttatt 43605647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 27630896 - 27630974
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||||  |||||||||||| |||   | ||| |||| ||| ||||||||||||| ||||||||    
T  27630896 agagaaatgatatttgtacatccattttatgacaattttttgacaactttctctctcatactcacattatattcttatt 27630974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 34838341 - 34838264
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||  | |||   |||||||| ||| || ||||| ||| ||||||||||||||||||||||    
T  34838341 gagaaatgatatttgtacatccaattttgtacaacttttgtacaatcttctctctcatactcacattatcttcttatt 34838264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 253
Target Start/End: Complemental strand, 13884231 - 13884163
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattat 253  Q
    ||||||||||||||||||| | ||||| |||||||||||  | ||| |||| ||| |||||||||||||    
T  13884231 gagaaatgatatttgtacaatcattttttgacaactttgtgacaactttctctctcatactcacattat 13884163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 9550479 - 9550401
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||| || | ||||| | ||||||||   | ||| |||| ||| ||||||||||||||||||||||    
T  9550479 agagaaatgatatttgtccaatcattttctaacaactttttgacaactttctctctcatactcacattatcttcttatt 9550401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 14228710 - 14228784
Alignment:
Q  188 aaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||  |||||| ||| |||||| ||| ||| |||| ||| |||||||||| || ||||||||    
T  14228710 aaatgatatttgtacaactattttgtgataacttttgtacaactttctctctcatactcacatgatgttcttatt 14228784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 18549978 - 18550056
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||| | |||||   | |||||| ||| ||| |||| ||| ||||||| ||||||||||||||    
T  18549978 agagaaatgatatttgtacaatcatttttgtataacttttgtacaacattctctctcatactcatattatcttcttatt 18550056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 22836211 - 22836133
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||   |||||   |||| ||| ||| ||| |||| ||| ||||||||||||||||||||||    
T  22836211 agagaaatgatatttgtacaaccattttcatacaaattttgtacaactttctctctcatactcacattatcttcttatt 22836133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 262
Target Start/End: Original strand, 25430689 - 25430723
Alignment:
Q  228 aaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||| ||||||||||||||||||||||    
T  25430689 aaccttctatctcatactcacattatcttcttatt 25430723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 30136087 - 30136049
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  30136087 agagaaatgatatttgaacatttatttaatgacaacttt 30136049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 40413410 - 40413372
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  40413410 agagaaatgatatttgtacaattattttgtgacaacttt 40413372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 42569789 - 42569751
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  42569789 agagaaatgatatttgaacattcattttatgacaacttt 42569751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 42159 - 42126
Alignment:
Q  186 agaaatgatatttgtacatttattttatgacaac 219  Q
    |||||||||||||||||| |||||||||||||||    
T  42159 agaaatgatatttgtacaattattttatgacaac 42126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 3207481 - 3207432
Alignment:
Q  186 agaaatgatatttgtacatttattttatgacaactttggtataaccttct 235  Q
    |||||||||||||||||||  ||||||||||| |||| ||| ||||||||    
T  3207481 agaaatgatatttgtacatccattttatgacaccttttgtacaaccttct 3207432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 21467384 - 21467421
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  21467384 gagaaatgatatttatacatttattttttgacaacttt 21467421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 26871046 - 26871127
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    ||||||||||||||||||| | | ||||||||||||||   | ||| |||| ||| || ||||||||||  |||||||||||    
T  26871046 gagaaatgatatttgtacaatcactttatgacaactttttgacaacattctctctcattctcacattatactcttattatct 26871127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 27300346 - 27300423
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||   |||||   |||||||| ||| ||| |||| ||| ||| ||||||||||||||||||    
T  27300346 gagaaatgatatttgtacaaccatttttgtacaacttttgtacaactttctctctcatattcacattatcttcttatt 27300423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 37294626 - 37294671
Alignment:
Q  217 aactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  37294626 aacttttgtacaaccttctctctcatactcacattatcttcttatt 37294671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 41406927 - 41406850
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||| | ||||| |||||| |||   | ||| |||| ||| |||||||||||||| |||||||    
T  41406927 gagaaatgatatttgtacaatcattttttgacaattttttaacaactttctctctcatactcacattatcctcttatt 41406850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 1422773 - 1422717
Alignment:
Q  206 tattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||| | |||||||| ||||||| |||| | | ||||||||||||||||||||||    
T  1422773 tatttttttacaacttttgtataacattctttttcatactcacattatcttcttatt 1422717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 34972244 - 34972208
Alignment:
Q  189 aatgatatttgtacatttattttatgacaactttggt 225  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  34972244 aatgatatttgtacatctatttaatgacaactttggt 34972208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 45108727 - 45108691
Alignment:
Q  186 agaaatgatatttgtacatttattttatgacaacttt 222  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  45108727 agaaatgatatttgtacatctattttttgacaacttt 45108691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 1402650 - 1402727
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||  |||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  1402650 gagaaatgatatttgtacatccattttatgacaacttttgtacaaccttctctctcatactcacattatcttcttatt 1402727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 34900639 - 34900721
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    |||||||||||| |||||||| ||||||||||||||||| ||| |||||||| | | ||||||||||||| ||||||||||||    
T  34900639 agagaaatgataattgtacatctattttatgacaacttttgtacaaccttctctatcatactcacattattttcttattatct 34900721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 185 - 261
Target Start/End: Original strand, 29525233 - 29525309
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttat 261  Q
    ||||||||||||||||||||| |||||||||||||||| ||| ||  |||| ||| |||||||||||||||||||||    
T  29525233 gagaaatgatatttgtacattcattttatgacaacttttgtacaatattctctctcatactcacattatcttcttat 29525309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 184 - 256
Target Start/End: Original strand, 44910696 - 44910768
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatctt 256  Q
    |||||||||||||||||||||| ||||||||| |||||| |||||| ||||| ||| ||||||||||||||||    
T  44910696 agagaaatgatatttgtacattcattttatgataacttttgtataatcttctctctcatactcacattatctt 44910768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 20549457 - 20549379
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||| |||||||||| || ||| ||||||| |||| ||| ||| ||||||||||||||||||    
T  20549457 agagaaatgatatttgtacatctattttatgataatttttgtataacattctctctcatattcacattatcttcttatt 20549379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 37585429 - 37585508
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggta-taaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||| |||||||||||| ||||||||||||| ||| ||| |||| |||| ||| ||||||||||||||||||||||    
T  37585429 agagaaattatatttgtacatctattttatgacaatttttgtactaacattctctctcatactcacattatcttcttatt 37585508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 261
Target Start/End: Complemental strand, 7286 - 7209
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttat 261  Q
    |||||||||||||||||||| | ||||| |||||||||| | | ||| |||| ||| ||||||||||||| |||||||    
T  7286 agagaaatgatatttgtacaatcattttctgacaacttttggacaactttctctctcatactcacattatattcttat 7209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 30664503 - 30664580
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||| | |||||   |||||||| ||| ||| |||| ||| ||||||||||||||||||||||    
T  30664503 gagaaatgatatttgtacaatcatttttgtacaacttttgtacaactttctctctcatactcacattatcttcttatt 30664580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 49130854 - 49130931
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||||||||||||||||| |||   | |||||||| | | |||||||||||||  |||||||    
T  49130854 gagaaatgatatttgtacatttattttatgacaattttttgacaaccttctctttcatactcacattatactcttatt 49130931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 8254026 - 8254092
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    ||||||||||||||||||||   ||||| |||||||||||||| ||| |||| ||| ||||||||||    
T  8254026 agagaaatgatatttgtacaaccattttgtgacaactttggtacaactttctctctcatactcacat 8254092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 32151887 - 32151965
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||| |||||| |||||||   | || ||| |||||||||||| ||| ||||||| ||||||||||||||    
T  32151887 agagaaatgatatgtgtacaattatttttgtataatttttgtataaccttctctctcatactcatattatcttcttatt 32151965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 49417574 - 49417644
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacattat 253  Q
    |||||||||||||||| |||| ||||||||||||||||| || | ||| |||| ||| |||||||||||||    
T  49417574 agagaaatgatatttgaacatctattttatgacaacttttgtgacaactttctctctcatactcacattat 49417644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 14839116 - 14839039
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||   |||||   |||||||| ||| |||||||| ||  ||||||||||||||||||||||    
T  14839116 gagaaatgatatttgtacaaccatttttgtacaacttttgtacaaccttctctcccatactcacattatcttcttatt 14839039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 41717262 - 41717338
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttctta 260  Q
    |||||||||||||||||||| ||||||  ||||||||||   | ||| |||||||| |||||||| |||| ||||||    
T  41717262 agagaaatgatatttgtacaattatttagtgacaacttttaaacaactttctatctcatactcacgttatattctta 41717338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 44855250 - 44855313
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactca 247  Q
    |||||||||||||||||| |  |||||| |||||||||| ||||||| |||| ||| |||||||    
T  44855250 agagaaatgatatttgtataactattttgtgacaacttttgtataactttctctctcatactca 44855313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 47988554 - 47988479
Alignment:
Q  187 gaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||  |||||| | ||||||||   | ||| |||| ||| ||||||||||||||||||||||    
T  47988554 gaaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacattatcttcttatt 47988479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 47997841 - 47997766
Alignment:
Q  187 gaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||  |||||| | ||||||||   | ||| |||| ||| ||||||||||||||||||||||    
T  47997841 gaaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacattatcttcttatt 47997766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 48007128 - 48007053
Alignment:
Q  187 gaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||  |||||| | ||||||||   | ||| |||| ||| ||||||||||||||||||||||    
T  48007128 gaaatgatatttgtacaactattttctaacaactttttgacaactttctctctcatactcacattatcttcttatt 48007053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 1765403 - 1765441
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  1765403 agagaaatgatatttgtacattcattttgtgacaacttt 1765441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 3281776 - 3281738
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  3281776 agagaaatgatatttgaacatttattttgtgacaacttt 3281738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 9027612 - 9027690
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||| ||||||||||   |||||   |||||||| ||| ||| || | ||||||||||||||||||||||||||    
T  9027612 agagaaatgttatttgtacaaccatttttatacaacttttgtacaactttatctctgatactcacattatcttcttatt 9027690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 24537218 - 24537296
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||||  | ||| ||||||||||   | |||||||| ||| ||||| |||||||| |||||||    
T  24537218 agagaaatgatatttgtacatccactttgtgacaactttttgacaaccttctttctcatacttacattatcctcttatt 24537296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 40159910 - 40159832
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||  |||||| | ||||||||   | ||| |||| ||| | ||||||||||||||||||||    
T  40159910 agagaaatgatatttgtacaactattttctaacaactttttgacaactttctctctcagactcacattatcttcttatt 40159832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 43333742 - 43333704
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  43333742 agagaaatgatatttgtacagtcattttatgacaacttt 43333704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 46094422 - 46094460
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  46094422 agagaaatgatatttggacattcattttatgacaacttt 46094460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 46316027 - 46315949
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||   | ||||||||||||||   |||| ||||| | | ||||||||||||| ||||||||    
T  46316027 agagaaatgatatttgtacaaccactttatgacaactttttgataatcttctctttcatactcacattatattcttatt 46315949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 50652387 - 50652453
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    ||||||||||||||||||||   |||||||||||||||| | ||||  || ||||| ||||||||||    
T  50652387 agagaaatgatatttgtacaaccattttatgacaacttttggataaatttatatctcatactcacat 50652453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 221
Target Start/End: Original strand, 6999168 - 6999205
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactt 221  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  6999168 agagaaatgatatttgaacattcattttatgacaactt 6999205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 11327108 - 11327173
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    |||||||||||||||||||   ||||| |||||||||| ||| ||| |||| ||| ||||||||||    
T  11327108 gagaaatgatatttgtacaaccattttgtgacaacttttgtacaactttctctctcatactcacat 11327173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 14992259 - 14992218
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggt 225  Q
    |||||||||||||||||||||  |||| ||||||||||||||    
T  14992259 agagaaatgatatttgtacatccatttaatgacaactttggt 14992218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 30568031 - 30567994
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaacttt 222  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  30568031 gagaaatgatatttgaacatttattttgtgacaacttt 30567994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 37710404 - 37710485
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    |||| |||||||||||||| | ||| | |||||||||| | | ||  |||| ||| |||||||||||||||||||| |||||    
T  37710404 gagagatgatatttgtacaatcattctgtgacaacttttgaacaagattctctctcatactcacattatcttcttactatct 37710485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 7867783 - 7867707
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttctta 260  Q
    ||||||||||||||||||||  |||||| ||||||||||   | ||  |||| ||| ||||||||||||| ||||||    
T  7867783 agagaaatgatatttgtacaactattttgtgacaacttttaaacaattttctttctcatactcacattatattctta 7867707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 8868871 - 8868947
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttctta 260  Q
    |||||||||||||||||||| |  |||| ||||||||||   | ||| |||| ||| ||||||||||||| ||||||    
T  8868871 agagaaatgatatttgtacaatctttttttgacaactttcagacaactttctctctcatactcacattatattctta 8868947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 36869909 - 36869833
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttctta 260  Q
    ||||||||||||||||||||   ||||| ||||||||||   | ||| |||| ||| ||||||||||||| ||||||    
T  36869909 agagaaatgatatttgtacaaccattttttgacaacttttagacaactttctctctcatactcacattatattctta 36869833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 40499737 - 40499773
Alignment:
Q  186 agaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||| | ||||||||||||||||||    
T  40499737 agaaatgatatttgtataattattttatgacaacttt 40499773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 55399999 - 55400067
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacatta 252  Q
    ||||||||||||||| ||||  |||||||||||||||| || | ||| |||| ||| ||||||||||||    
T  55399999 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 55400067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 45521651 - 45521573
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||||  |||||||||||||||| ||| |||||||| ||| ||||||| ||||||||||||||    
T  45521651 agagaaatgatatttgtacatccattttatgacaacttttgtacaaccttctctctcatactcatattatcttcttatt 45521573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 6126852 - 6126930
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||| |||||||||||| ||||||||||||| ||| ||| ||| |||| ||| ||||||||||||||||||||||    
T  6126852 agagaaatcatatttgtacatctattttatgacaatttttgtacaacattctctctcatactcacattatcttcttatt 6126930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 36364860 - 36364779
Alignment:
Q  185 gagaaatgatatttgtacatttattttat----gacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||  |||||||    ||||||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  36364860 gagaaatgatatttgtacatccattttatttatgacaacttttgtacaaccttctctctcatactcacattatcttcttatt 36364779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 36512841 - 36512919
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||| ||||||||||||||||||||| ||||||||   | |||||||| ||| |||||||||||||  |||||||    
T  36512841 agagaaattatatttgtacatttattttataacaactttttgacaaccttctctctcatactcacattatactcttatt 36512919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 41609751 - 41609673
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||||  |||||||||||||||| ||| ||| || | ||| ||||||||||||| || |||||    
T  41609751 agagaaatgatatttgtacatccattttatgacaacttttgtacaactttatctctcatactcacattatgtttttatt 41609673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 50291281 - 50291359
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||| | |||||   ||||||||  || |||||||| ||| ||||||||||||||||||||||    
T  50291281 agagaaatgatatttgtacaatcatttttgtacaacttttatacaaccttctctctcatactcacattatcttcttatt 50291359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 24772671 - 24772748
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||  ||||||||||||||||   | |||||||| ||| |||||||||||||  |||||||    
T  24772671 gagaaatgatatttgtacatccattttatgacaactttttgacaaccttctctctcatactcacattatactcttatt 24772748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 6686047 - 6686123
Alignment:
Q  186 agaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||| ||||||||||||||| | || ||| ||| ||| |||| ||| ||||| ||||||||||||||||    
T  6686047 agaaatgatattcgtacatttattttataataatttttgtacaacattctctctcatacttacattatcttcttatt 6686123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 29577508 - 29577430
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||  ||||||   |||| ||| ||| ||| |||| ||| ||||||||||||||||||||||    
T  29577508 agagaaatgatatttgtacaactatttttgtacaatttttgtacaactttctttctcatactcacattatcttcttatt 29577430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 36110134 - 36110211
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||  ||||||   |||| ||| ||| |||||||| ||| ||| ||||||||||||||||||    
T  36110134 gagaaatgatatttgtacaactatttttgtacaatttttgtacaaccttctctctcatattcacattatcttcttatt 36110211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 39881101 - 39881024
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||| | ||||| | ||||||||   | ||| |||| ||| ||||||||||||||||||||||    
T  39881101 gagaaatgatatttgtacaatcattttctaacaactttttgacaactttctctctcatactcacattatcttcttatt 39881024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 34259814 - 34259890
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttctta 260  Q
    ||||||||||||||||||||   ||||| |||||||| | | | ||| |||| ||| ||||||||||||||||||||    
T  34259814 agagaaatgatatttgtacaaccattttgtgacaactgttgaacaactttctctctcatactcacattatcttctta 34259890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 44272882 - 44272806
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttctta 260  Q
    ||||||||||||||||||||  |||||| ||||||||||   | ||| |||| ||| ||||||||||||| ||||||    
T  44272882 agagaaatgatatttgtacaactattttttgacaacttttaaacaactttctctctcatactcacattatattctta 44272806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 3222988 - 3223054
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    |||||||||||||||||||| | | ||| |||||||||| ||| ||| |||| ||| ||||||||||    
T  3222988 agagaaatgatatttgtacaatcaatttgtgacaacttttgtacaactttctctctcatactcacat 3223054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 4577556 - 4577634
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||   |||||   |||| ||| ||| ||| |||| ||| ||||||||||||||||||||||    
T  4577556 agagaaatgatatttgtacaaccattttcgtacaatttttgtacaactttctctctcatactcacattatcttcttatt 4577634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 17363229 - 17363307
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||| | | ||||| ||||||||   | ||| |||| ||| ||||||||||||| ||||||||    
T  17363229 agagaaatgatatttgtacaatcactttattacaactttttgacaactttctctctcatactcacattatattcttatt 17363307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 37775499 - 37775421
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||| |||||||||| ||||  |||||||| |||||||| ||| ||| |||| | | |||| |||||||||||||||||    
T  37775499 agagtaatgatatttctacaactattttattacaacttttgtacaactttctctttcatacacacattatcttcttatt 37775421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 38864808 - 38864770
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  38864808 agagaaatgatatttgtacaattattttgtgacaacttt 38864770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 41262690 - 41262652
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  41262690 agagaaatgatatttgtacaattattttgtgacaacttt 41262652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 44368274 - 44368208
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    |||||||||||||||||||| | | ||| |||||||||| ||| ||| |||| ||| ||||||||||    
T  44368274 agagaaatgatatttgtacaatcaatttgtgacaacttttgtacaactttctctcttatactcacat 44368208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 46566928 - 46567010
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    |||||||||||||||||||||  | ||| ||||||||||   | ||| |||| ||| ||||||||||||| |||||| |||||    
T  46566928 agagaaatgatatttgtacatccactttgtgacaacttttagacaactttctctctcatactcacattatattcttactatct 46567010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 3475869 - 3475934
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    |||||||||||||||||||   |||||||||||||||| ||| ||| |||| ||| ||| ||||||    
T  3475869 gagaaatgatatttgtacaaccattttatgacaacttttgtacaactttctctctcatattcacat 3475934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 5208399 - 5208330
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattat 253  Q
    ||||||||||||||||||||   | ||| |||||||||| ||| ||| |||| ||| |||||||||||||    
T  5208399 agagaaatgatatttgtacaaccaatttgtgacaacttttgtacaactttctctctcatactcacattat 5208330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 8455860 - 8455929
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattat 253  Q
    ||||||||| ||||||||||  |||||| |||||||||| | | ||| |||| ||| |||||||||||||    
T  8455860 agagaaatgttatttgtacaactattttgtgacaacttttgaacaactttctctctaatactcacattat 8455929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 17683236 - 17683273
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaacttt 222  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  17683236 gagaaatgatatttgaacattcattttatgacaacttt 17683273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 260
Target Start/End: Original strand, 18944309 - 18944354
Alignment:
Q  215 acaactttggtataaccttctatctgatactcacattatcttctta 260  Q
    |||||||| ||| |||||||| ||| ||||||||||||||||||||    
T  18944309 acaacttttgtacaaccttctctctcatactcacattatcttctta 18944354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 25523269 - 25523192
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||  |||||| | ||||||||   | ||| |||| ||| |||||||||||||| |||||||    
T  25523269 gagaaatgatatttgtacaactattttctcacaactttttgacaactttctctctcatactcacattatcctcttatt 25523192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 253
Target Start/End: Complemental strand, 30170091 - 30170022
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacattat 253  Q
    ||||||| ||||||| |||| ||||||||||||||||| || | ||| |||| ||| |||||||||||||    
T  30170091 gagaaattatatttgaacatctattttatgacaacttttgtgacaactttctctctcatactcacattat 30170022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 32294799 - 32294754
Alignment:
Q  217 aactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  32294799 aacttttgtacaaccttctctctcatactcacattatcttcttatt 32294754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 40335789 - 40335870
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    ||||||||||||||||||| | ||||||| |||| |||   | ||| |||| ||| || |||||||||| ||||||||||||    
T  40335789 gagaaatgatatttgtacaatcattttattacaattttttgacaactttctctctcatgctcacattattttcttattatct 40335870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 56025440 - 56025399
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggt 225  Q
    |||| ||||||||||||||||| |||| ||||||||||||||    
T  56025440 agagcaatgatatttgtacattcatttaatgacaactttggt 56025399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 24019863 - 24019899
Alignment:
Q  189 aatgatatttgtacatttattttatgacaactttggt 225  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  24019863 aatgatatttgtacatctatttaatgacaactttggt 24019899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 18508077 - 18508155
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||||  ||||||||| |||||| ||||||| |||| ||| ||||||||||||||||||||||    
T  18508077 agagaaatgatatttgtacatccattttatgataacttttgtataacattctctctcatactcacattatcttcttatt 18508155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 262
Target Start/End: Complemental strand, 3366465 - 3366391
Alignment:
Q  188 aaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||||| |||||||||| |||||| || |||||    
T  3366465 aaatgatatttgtacatctattttattacaacttttgtacaaccttctctctgatactcccattatgtttttatt 3366391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 262
Target Start/End: Complemental strand, 43791870 - 43791798
Alignment:
Q  188 aaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||  |||||||||||||||| ||| |||||||  ||| ||| ||||||||||||||||||    
T  43791870 aaatgatatttgtacatccattttatgacaacttttgtacaaccttc--tctcataatcacattatcttcttatt 43791798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 12256900 - 12256978
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||| | |||||   | |||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  12256900 agagaaatgatatttgtacaatcatttttgtataacttttgtacaaccttctctctcatactcacattatcttcttatt 12256978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 5852474 - 5852555
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    |||||||||||||||||||   |||||   |||||||| ||| |||||||| ||| ||||||||||||| ||||||||||||    
T  5852474 gagaaatgatatttgtacaaccatttttgtacaacttttgtacaaccttctctctcatactcacattattttcttattatct 5852555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 15141472 - 15141510
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  15141472 agagaaatgatatttgtacatctattttatgacaacttt 15141510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 36383461 - 36383543
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    ||||||||||||||||||||   ||||| |||||||||| ||| ||| |||| ||| |||||||||| || ||||||| ||||    
T  36383461 agagaaatgatatttgtacaaagattttgtgacaacttttgtacaactttctctctcatactcacatgatgttcttatcatct 36383543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 14713986 - 14714063
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||  ||||||||||||||||   | ||| |||| ||| |||||||||||||  |||||||    
T  14713986 gagaaatgatatttgtacatcaattttatgacaacttttaaacaacattctctctcatactcacattataatcttatt 14714063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 23345061 - 23344992
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattat 253  Q
    |||||||||||||||||||||| ||||||| ||||||||   | |||||||| ||| ||| |||||||||    
T  23345061 agagaaatgatatttgtacattcattttataacaactttttgacaaccttctctctcatattcacattat 23344992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 31635881 - 31635800
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    |||||||||||||||||||   ||||| | ||||||||   | ||| |||| ||| ||||||||||||||||||||||||||    
T  31635881 gagaaatgatatttgtacaaccattttctaacaactttttgacaactttctctctcatactcacattatcttcttattatct 31635800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 44897626 - 44897703
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||   |||||   |||||||| ||| |||||||| |||  |||||||||||||||||||||    
T  44897626 gagaaatgatatttgtacaaccatttttgtacaactttcgtacaaccttctctctcgtactcacattatcttcttatt 44897703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 8087372 - 8087408
Alignment:
Q  186 agaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||||| ||||||||||||||||||    
T  8087372 agaaatgatatttgtacaattattttatgacaacttt 8087408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 26206848 - 26206916
Alignment:
Q  186 agaaatgatatttgtacatttattttatgacaa-ctttggtataaccttctatctgatactcacattat 253  Q
    |||||||||||||| |||| |||||||||||||  |||| |||||| |||| ||| |||||||||||||    
T  26206848 agaaatgatatttgaacatctattttatgacaatttttgttataactttctctctcatactcacattat 26206916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 34141441 - 34141520
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgata-ctcacattatcttcttatt 262  Q
    |||||||||||||||||||| | |||||   |||||||| ||| |||||||| ||| ||| |||| ||||||||||||||    
T  34141441 agagaaatgatatttgtacaatcatttttgtacaacttttgtacaaccttctctctcatacctcatattatcttcttatt 34141520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 260
Target Start/End: Complemental strand, 43622015 - 43621944
Alignment:
Q  189 aatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttctta 260  Q
    |||||||||||||||  ||||||||||||||||| | | ||| |||| ||| ||||| || |||||||||||    
T  43622015 aatgatatttgtacaactattttatgacaacttttgaacaactttctctctcatacttacgttatcttctta 43621944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 2013357 - 2013323
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaa 218  Q
    |||||||||||||||||||||| ||||||||||||    
T  2013357 agagaaatgatatttgtacattcattttatgacaa 2013323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 4723565 - 4723643
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||| ||||||   ||||| | ||||||||  || ||| |||| ||| ||||||||||||||||||||||    
T  4723565 agagaaatgatatatgtacaaccattttttaacaacttttttacaactttctctctcatactcacattatcttcttatt 4723643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 11152771 - 11152693
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||| | |||||   | || ||| ||| |||||||| ||| ||||||| ||||||||||||||    
T  11152771 agagaaatgatatttgtacaatcatttttatataatttttgtacaaccttctctctcatactcatattatcttcttatt 11152693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 12208441 - 12208519
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||   |||||   |||||||| ||||||| |||| | | ||||||||||||| ||||||||    
T  12208441 agagaaatgatatttgtacaaccatttttgtacaacttttgtataactttctctttcatactcacattattttcttatt 12208519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 27307303 - 27307237
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    |||||||||||||||||||| | | ||| |||||||||| ||| ||| |||| ||| ||||||||||    
T  27307303 agagaaatgatatttgtacaatcaatttgtgacaacttttgtacaactttctctctcatactcacat 27307237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 28679131 - 28679205
Alignment:
Q  188 aaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||| | |||||   |||||||| ||| ||| |||| ||| ||||||| ||||||||||||||    
T  28679131 aaatgatatttgtacaatcatttttgtacaacttttgtacaacattctctctcatactcatattatcttcttatt 28679205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 29168724 - 29168806
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    ||||||||||||||||||||   ||||| |||||||||| | | ||| |||| ||| |||||||||| |  ||||||||||||    
T  29168724 agagaaatgatatttgtacaaccattttttgacaacttttgcacaactttctctctcatactcacatgacattcttattatct 29168806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 29871424 - 29871386
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  29871424 agagaaatgatatttgtacaattagtttatgacaacttt 29871386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 30339992 - 30340070
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||   |||||   |||||||| ||| ||| |||| ||| ||||||||||||||||| ||||    
T  30339992 agagaaatgatatttgtacaaccatttttgtacaacttttgtacaactttctctctcatactcacattatcttcatatt 30340070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 35171298 - 35171232
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    ||||||||||||||||||||   ||||| |||||| ||||||| ||| |||| ||| ||||||||||    
T  35171298 agagaaatgatatttgtacaaccattttgtgacaattttggtacaactttctctctcatactcacat 35171232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 262
Target Start/End: Complemental strand, 38027683 - 38027609
Alignment:
Q  188 aaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||| ||||||| | |||||   |||||||| ||| |||||||| ||| ||| ||||||||||||||||||    
T  38027683 aaatgatacttgtacaatcatttttgtacaacttttgtacaaccttctctctcatattcacattatcttcttatt 38027609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 42665884 - 42665806
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||| | | ||||| ||||||||   | ||| |||| ||| ||||||||||||| ||||||||    
T  42665884 agagaaatgatatttgtacaatcactttattacaactttttgacaactttctctctcatactcacattatattcttatt 42665806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 44050014 - 44050084
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacattat 253  Q
    |||||||||||| |||||||   |||||||||||||||| || | |||||||| ||| |||||||||||||    
T  44050014 agagaaatgatacttgtacaaccattttatgacaacttttgtgacaaccttctctctcatactcacattat 44050084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 3196158 - 3196093
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    ||||||||||||||||||| | | ||| |||||||||| ||| ||| |||| ||| ||||||||||    
T  3196158 gagaaatgatatttgtacaatcaatttgtgacaacttttgtacaactttctctctcatactcacat 3196093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 5455524 - 5455447
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||  | ||| ||||||| ||   | ||| |||| ||| ||||||||||||||||||||||    
T  5455524 gagaaatgatatttgtacatccactttgtgacaaccttttgacaactttctctcttatactcacattatcttcttatt 5455447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 222
Target Start/End: Complemental strand, 11548102 - 11548069
Alignment:
Q  189 aatgatatttgtacatttattttatgacaacttt 222  Q
    ||||||||||||||| ||||||||||||||||||    
T  11548102 aatgatatttgtacaattattttatgacaacttt 11548069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 11980651 - 11980728
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||   ||||| | ||||||||   | ||| || ||||| ||||||||||||||||||||||    
T  11980651 gagaaatgatatttgtacaaccattttctaacaactttttgacaactttttatctcatactcacattatcttcttatt 11980728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 17917389 - 17917466
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||| ||||||| | |||| |||   ||||  |||| ||| |||||||||||||||| |||||    
T  17917389 gagaaatgatatttgtacaattattttttaacaattttttgataattttctctctcatactcacattatctttttatt 17917466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 42554776 - 42554853
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||   | ||||| ||||||||  || ||| |||| ||| ||||||||||||| ||||||||    
T  42554776 gagaaatgatatttgtacaaccactttattacaacttttttacaactttctctctcatactcacattatattcttatt 42554853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 43725216 - 43725253
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||||||| || ||||||||||||||    
T  43725216 gagaaatgatatttgtacatctactttatgacaacttt 43725253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 45372642 - 45372605
Alignment:
Q  188 aaatgatatttgtacatttattttatgacaactttggt 225  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  45372642 aaatgatatttgtacattcatttaatgacaactttggt 45372605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 256
Target Start/End: Complemental strand, 4114493 - 4114421
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatctt 256  Q
    |||||||| |||||||||||   ||||||| | |||||| ||||||| |||| ||| |||| |||||||||||    
T  4114493 agagaaattatatttgtacaaccattttattataacttttgtataactttctctctcatacacacattatctt 4114421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 6999139 - 6999071
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacatta 252  Q
    ||||||||||||||| ||||  |||||||||||||||| || | ||| |||| ||| ||||||||||||    
T  6999139 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 6999071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 12175220 - 12175256
Alignment:
Q  189 aatgatatttgtacatttattttatgacaactttggt 225  Q
    |||||||||||||||||||||| |||| |||||||||    
T  12175220 aatgatatttgtacatttatttaatgataactttggt 12175256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 2855032 - 2854954
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||||| |||||||||||||||| ||| || ||| | ||| ||||||||||||||||||||||    
T  2855032 agagaaatgatatttgtacattcattttatgacaacttttgtacaatcttttctctcatactcacattatcttcttatt 2854954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 17167848 - 17167926
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||||  ||||||||||||||||  || |||||||| ||| ||||| ||||||||||||||||    
T  17167848 agagaaatgatatttgtacatccattttatgacaacttttatacaaccttctctctcatactaacattatcttcttatt 17167926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 32873340 - 32873418
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||||  ||||||||| |||||| ||| || ||| ||||| ||||||||||||||||||||||    
T  32873340 agagaaatgatatttgtacatccattttatgataacttttgtacaatcttttatctcatactcacattatcttcttatt 32873418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 5574329 - 5574253
Alignment:
Q  186 agaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||| | |||||   |||||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  5574329 agaaatgatatttgtacaatcatttttgtacaacttttgtacaaccttctctctcatactcacattatcttcttatt 5574253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 16234362 - 16234303
Alignment:
Q  188 aaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactca 247  Q
    |||||||||||||||||  |||||||||||||||| |||||||||||| ||| |||||||    
T  16234362 aaatgatatttgtacatccattttatgacaacttttgtataaccttctctctcatactca 16234303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 34008179 - 34008249
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacattat 253  Q
    |||||||||||||||| |||| ||||||||||||||||| || | ||| |||||||| |||||||||||||    
T  34008179 agagaaatgatatttgaacatctattttatgacaacttttgtgacaactttctatctcatactcacattat 34008249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 51286439 - 51286369
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacattat 253  Q
    |||||||||||||||| |||||||||||||||||||||| || | ||| |||| ||| |||||||||||||    
T  51286439 agagaaatgatatttgaacatttattttatgacaacttttgtgacaactttctctctcatactcacattat 51286369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 12990540 - 12990463
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||   |||||   |||||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  12990540 gagaaatgatatttgtacaaccatttttgtacaactttcgtacaaccttctctctcatactcacattatcttcttatt 12990463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 259
Target Start/End: Complemental strand, 7078572 - 7078497
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttctt 259  Q
    ||||||||||||||||||||| |||||| |||||||||| | | ||| |||| ||| |||||||||| || |||||    
T  7078572 agagaaatgatatttgtacatctattttgtgacaacttttgaacaactttctctctcatactcacataatattctt 7078497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 266
Target Start/End: Complemental strand, 51728067 - 51727990
Alignment:
Q  187 gaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    ||||||||||||||||||  || | ||||||| |||| || |||||||| ||| ||||||||||||||||||||||||||    
T  51728067 gaaatgatatttgtacatccatat-atgacaattttg-tacaaccttctctctcatactcacattatcttcttattatct 51727990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 21854536 - 21854458
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||| |||||||   |||||||| ||| ||| |||| ||| ||||||| ||||| ||||||||    
T  21854536 agagaaatgatatttgtacaattattttggtacaacttttgtacaactttctctctcatactcatattatgttcttatt 21854458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 34395987 - 34395925
Alignment:
Q  188 aaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    ||||||||||||||||| ||||||||||||||||| | | ||| |||| ||| ||||||||||    
T  34395987 aaatgatatttgtacatctattttatgacaacttttgaacaactttctctctcatactcacat 34395925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 37843504 - 37843422
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    ||||||||||||||||||||  || ||| |||||||||||  | ||| |||| ||| |||||||||||||  |||||||||||    
T  37843504 agagaaatgatatttgtacaactactttttgacaactttgtgacaactttctctctcatactcacattatactcttattatct 37843422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 40610228 - 40610306
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||| |||||| |||||||||||| |||   | |||||||| ||| |||||||||||||  |||||||    
T  40610228 agagaaatgatatttatacattcattttatgacaattttttgacaaccttctctctcatactcacattatactcttatt 40610306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 42256459 - 42256525
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    ||||||||||||||||||||   ||||| |||||||||||||| ||| |||| ||| ||||||||||    
T  42256459 agagaaatgatatttgtacaaccattttgtgacaactttggtacaactttctctctcatactcacat 42256525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 47214207 - 47214277
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacattat 253  Q
    |||||||||||||||| |||| ||||||||||||||||| || | ||| |||| ||| |||||||||||||    
T  47214207 agagaaatgatatttgaacatctattttatgacaacttttgtgacaactttctctctcatactcacattat 47214277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 32915144 - 32915075
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacatta 252  Q
    |||||||||||||||| |||| ||||||||||||||||| || | ||| |||| ||| ||||||||||||    
T  32915144 agagaaatgatatttgaacatctattttatgacaacttttgtgacaactttctctctcatactcacatta 32915075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 259
Target Start/End: Complemental strand, 11097956 - 11097881
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttctt 259  Q
    |||||||||||||||||||||  ||||| |||||||||| | | ||| |||| ||| |||||||||| || |||||    
T  11097956 agagaaatgatatttgtacatccattttgtgacaacttttgaacaactttctctctcatactcacataatattctt 11097881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 29706775 - 29706708
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaac-tttggtataaccttctatctgatactcacat 250  Q
    ||||||||||||||||||||   ||||||||| ||| |||| ||||||||||| ||| ||||||||||    
T  29706775 agagaaatgatatttgtacaaccattttatgataacttttgttataaccttctctctcatactcacat 29706708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 29877018 - 29877057
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttg 223  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  29877018 agagcaatgatatttgtacatttatttaatgacaactttg 29877057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 48962016 - 48962063
Alignment:
Q  215 acaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  48962016 acaacttttgtacaaccttctctctcatactcacattatcttcttatt 48962063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 18610772 - 18610838
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    ||||||||||||||||||||  |||||| ||||||||||  || ||| |||| ||| ||||||||||    
T  18610772 agagaaatgatatttgtacaactattttgtgacaacttttttacaactttctctctcatactcacat 18610838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 19651409 - 19651487
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||  ||||   ||||| |||||||||| ||||||| |||| ||| |||||||||| || ||||||||    
T  19651409 agagaaatgatattcctacaaccattttgtgacaacttttgtataactttctctctcatactcacatgatgttcttatt 19651487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 222
Target Start/End: Complemental strand, 24265646 - 24265612
Alignment:
Q  188 aaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||| ||||||||||||||||||    
T  24265646 aaatgatatttgtacaattattttatgacaacttt 24265612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 24673068 - 24673106
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  24673068 agagaaatgatatttgaacatctattttatgacaacttt 24673106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 29489431 - 29489365
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    ||||||||||||||||||||   ||||| ||| |||||||||| ||| |||| ||| ||||||||||    
T  29489431 agagaaatgatatttgtacaaccattttgtgataactttggtacaactttctctctcatactcacat 29489365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 35883679 - 35883641
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  35883679 agagaaatgatatttgtacaattattttttgacaacttt 35883641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 37588747 - 37588709
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  37588747 agagaaatgatatttgaacatttattttgtgacaacttt 37588709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 41564952 - 41564874
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||   |||||   |||||||| ||| |||||| | | | ||||||||||||||||||||||    
T  41564952 agagaaatgatatttgtacaaccatttttgtacaacttttgtacaaccttttcttttatactcacattatcttcttatt 41564874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 44672102 - 44672024
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||| | ||||| | ||||||||   | ||  |||| ||| ||||||||||||||||||||||    
T  44672102 agagaaatgatatttgtacaatcattttttaacaactttttgacaattttctctctcatactcacattatcttcttatt 44672024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 46947981 - 46948056
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||  ||||||||||||||||   | |||||||| |||  ||||||||||||  |||||||    
T  46947981 gagaaatgatatttgtacatccattttatgacaactttttgacaaccttctctct--tactcacattatactcttatt 46948056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 52362481 - 52362551
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacattat 253  Q
    |||||||||||||||| ||||  |||||||||||||||| || | ||| |||| ||| |||||||||||||    
T  52362481 agagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacattat 52362551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 10890118 - 10890049
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacatta 252  Q
    |||||||||||||||| ||||  |||||||||||||||| || | ||| |||| ||| ||||||||||||    
T  10890118 agagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 10890049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 12999894 - 12999825
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattat 253  Q
    ||||||||||||||||||||   ||||| | |||||||| ||| ||| |||| ||| |||||||||||||    
T  12999894 agagaaatgatatttgtacaaccattttctaacaacttttgtacaactttctctctcatactcacattat 12999825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 15705134 - 15705065
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacatta 252  Q
    |||||||||||||||| ||||  |||||||||||||||| || | ||| |||| ||| ||||||||||||    
T  15705134 agagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 15705065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 30530470 - 30530389
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    |||||||||||||||||||   | ||||| ||||||||   | ||| |||| ||| ||||||||||||| ||||||||||||    
T  30530470 gagaaatgatatttgtacaaccactttattacaactttttaacaactttctctctcatactcacattatattcttattatct 30530389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 34254423 - 34254386
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactt 221  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  34254423 agagaaatgatatttgaacattcattttatgacaactt 34254386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 13489662 - 13489730
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacatta 252  Q
    ||||||||||||||| ||||  |||||||||||||||| || | ||| |||| ||| ||||||||||||    
T  13489662 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 13489730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 27352629 - 27352705
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttctta 260  Q
    ||||||||||||||||||||   ||||| ||| |||||| | | ||| |||| ||| ||||||||||||| ||||||    
T  27352629 agagaaatgatatttgtacaaccattttgtgataacttttggacaactttctctctcatactcacattatattctta 27352705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 33054158 - 33054090
Alignment:
Q  186 agaaatgatatttgtacatttattttatgacaac-tttggtataaccttctatctgatactcacattat 253  Q
    |||||||||||||| ||||| ||||| ||||||| |||| || ||| |||| ||| |||||||||||||    
T  33054158 agaaatgatatttgaacattcattttgtgacaacttttgctacaactttctctctcatactcacattat 33054090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 45008236 - 45008168
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacatt 251  Q
    |||||||||||||||  ||| ||||||| |||||||||| || ||||| |||| ||| |||||||||||    
T  45008236 agagaaatgatatttcaacaattattttgtgacaacttttgtaataactttctctctcatactcacatt 45008168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 27704434 - 27704512
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||  ||||||   |||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  27704434 agagaaatgatatttgtacaactatttttgtacaacttttgtacaaccttctatctcatactcacattatcttcttatt 27704512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 10591402 - 10591340
Alignment:
Q  191 tgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattat 253  Q
    |||||||||||||| ||||||||||||||||| ||| |||||||| ||| |||||||||||||    
T  10591402 tgatatttgtacatctattttatgacaactttagtacaaccttctctctcatactcacattat 10591340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 48639455 - 48639377
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||   |||||   |||||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  48639455 agagaaatgatatttgtacaaccatttttgtacaacttttgtacaaccttctctctcatactcacattatcttcttatt 48639377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 4971289 - 4971371
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    ||||||||||||||||||||   ||||| ||||||||||  || ||| |||| ||| ||||||||||||| |||||| |||||    
T  4971289 agagaaatgatatttgtacaaccattttgtgacaacttttatacaactttctctctcatactcacattatattcttactatct 4971371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 11564896 - 11564962
Alignment:
Q  188 aaatgatatttgtacatttattttatgacaac-tttggtataaccttctatctgatactcacattat 253  Q
    |||||||||||| ||||||||||| ||||||| |||| |||||| |||| ||| |||||||||||||    
T  11564896 aaatgatatttgaacatttattttgtgacaacttttgctataactttctctctcatactcacattat 11564962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 27164909 - 27164843
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    |||||||||||||||||||| | | ||| |||||||||| ||||||| |||| ||| ||||||||||    
T  27164909 agagaaatgatatttgtacaatcaatttgtgacaacttttgtataactttctctctcatactcacat 27164843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 266
Target Start/End: Complemental strand, 37385301 - 37385223
Alignment:
Q  188 aaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    ||||||||||||||||  |||||| |||||||||| ||| ||| |||| ||| |||||||||| |  ||||||||||||    
T  37385301 aaatgatatttgtacaactattttttgacaacttttgtacaactttctctctcatactcacatgacattcttattatct 37385223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 40231777 - 40231708
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacattat 253  Q
    |||||||||||||||||||| ||||||| |||||||||| || | ||||||| |||| |||||||||||||    
T  40231777 agagaaatgatatttgtacaattatttt-tgacaacttttgtgacaaccttccatctcatactcacattat 40231708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 41538481 - 41538559
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||   |||||   |||| ||| ||| |||||||| ||| ||||||||||||||||||||||    
T  41538481 agagaaatgatatttgtacaaccatttttgtacaatttttgtacaaccttctctctcatactcacattatcttcttatt 41538559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 41910257 - 41910179
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||| |||||||||||||||   |||||   |||||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  41910257 agagtaatgatatttgtacaaccatttttgtacaacttttgtacaaccttctctctcatactcacattatcttcttatt 41910179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 2347130 - 2347065
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    |||||||||||||||||||   ||||| |||||||||||||| ||| |||| ||| ||||||||||    
T  2347130 gagaaatgatatttgtacaaccattttgtgacaactttggtacaactttctctctcatactcacat 2347065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 26153646 - 26153722
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||  ||||||||||||||||| | | ||  |||| ||| ||||||||||||| ||||||||    
T  26153646 gagaaatgatatttgtacaactattttatgacaacttttg-acaattttctctctcatactcacattatattcttatt 26153722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 261
Target Start/End: Complemental strand, 40207871 - 40207795
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttat 261  Q
    |||||||||||||||||||  ||||||   |||||||| ||||||  |||| ||| ||| |||||||||||||||||    
T  40207871 gagaaatgatatttgtacaactatttttgtacaacttttgtataattttctttctcatattcacattatcttcttat 40207795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 46456559 - 46456595
Alignment:
Q  189 aatgatatttgtacatttattttatgacaactttggt 225  Q
    |||||||||||||||||||||| ||||||||||||||    
T  46456559 aatgatatttgtacatttatttaatgacaactttggt 46456595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 49025373 - 49025337
Alignment:
Q  186 agaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||||| ||||||||||||||||||    
T  49025373 agaaatgatatttgtacaattattttatgacaacttt 49025337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 47945013 - 47945060
Alignment:
Q  215 acaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  47945013 acaacttttgtacaaccttctctctcatactcacattatcttcttatt 47945060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 47950443 - 47950490
Alignment:
Q  215 acaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  47950443 acaacttttgtacaaccttctctctcatactcacattatcttcttatt 47950490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 116630 - 116696
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    ||||||||||||||| ||||  |||||| || ||||||||||| ||| |||| ||| ||||||||||    
T  116630 agagaaatgatatttatacaactattttgtgccaactttggtacaactttctctctcatactcacat 116696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 7990078 - 7990156
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||| |||||||||| || |||   ||||  |||| ||| |||||||||||||  |||||||    
T  7990078 agagaaatgatatttgtacatctattttatgataattttttgataattttctctcttatactcacattatactcttatt 7990156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 19426579 - 19426657
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||   ||||| ||||||||||   | ||| |||| ||| |||||||||||||| |||||||    
T  19426579 agagaaatgatatttgtacaaccattttgtgacaactttttgacaactttctctctcatactcacattatcctcttatt 19426657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 27070740 - 27070659
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    |||||||||||||||||||| | ||||||| |||||||| | | ||| |||| |||  |||||||||||| || |||||||||    
T  27070740 agagaaatgatatttgtacaatcattttattacaacttttg-acaactttctctctcgtactcacattatatttttattatct 27070659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 27207573 - 27207654
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    |||||||||||||||||||| | ||||||| |||||||| | | ||| |||| |||  |||||||||||| || |||||||||    
T  27207573 agagaaatgatatttgtacaatcattttattacaacttttg-acaactttctctctcgtactcacattatatttttattatct 27207654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 28548293 - 28548215
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||  ||||||   |||||||| ||| ||| |||| ||| ||||||||||||| || |||||    
T  28548293 agagaaatgatatttgtacaactattttggtacaacttttgtacaactttctctctcatactcacattatgtttttatt 28548215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 28862142 - 28862104
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  28862142 agagaaatgatatttgtacatccattttatgacaacttt 28862104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 29162350 - 29162288
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactca 247  Q
    ||||||||||||||||||| | | ||| |||||||||| ||||||| |||| ||| |||||||    
T  29162350 gagaaatgatatttgtacaatcaatttgtgacaacttttgtataactttctctctcatactca 29162288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 47078311 - 47078273
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  47078311 agagaaatgatatttgaacatctattttatgacaacttt 47078273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 222
Target Start/End: Original strand, 2346951 - 2346984
Alignment:
Q  189 aatgatatttgtacatttattttatgacaacttt 222  Q
    ||||||||||||||||| ||||||||||||||||    
T  2346951 aatgatatttgtacattcattttatgacaacttt 2346984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 21037305 - 21037228
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||| ||| ||| | ||||||||   | ||| |||| ||| ||||||||||||| ||||||||    
T  21037305 gagaaatgatatttgtacaattaatttctaacaactttttgacaactttctctcttatactcacattatattcttatt 21037228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 22638955 - 22638918
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaacttt 222  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  22638955 gagaaatgatatttgaacatctattttatgacaacttt 22638918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 30447357 - 30447437
Alignment:
Q  184 agagaaatgatatttgtacatt--tattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||| |||  |||||||||||||||||   | || ||||| ||| |||||||||||||  |||||||    
T  30447357 agagaaatgatatttgtagattcatattttatgacaactttttgacaatcttctctctcatactcacattatactcttatt 30447437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 33050183 - 33050248
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    |||||||||||||||||||   ||||| |||||||||| ||| ||| |||| ||| ||||||||||    
T  33050183 gagaaatgatatttgtacaaccattttgtgacaacttttgtacaactttctctctcatactcacat 33050248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 37969931 - 37970008
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||  ||||||   |||||||| ||| ||| |||| ||| ||||||||||||| || |||||    
T  37969931 gagaaatgatatttgtacaactattttgatacaacttttgtacaactttctctctcatactcacattatgtttttatt 37970008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 17039158 - 17039234
Alignment:
Q  186 agaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||  ||||||   | || ||| ||| ||| |||| ||| ||||||||||||||||||||||    
T  17039158 agaaatgatatttgtacaactatttttgtataatttttgtacaactttctctctcatactcacattatcttcttatt 17039234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 42060836 - 42060800
Alignment:
Q  189 aatgatatttgtacatttattttatgacaactttggt 225  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  42060836 aatgatatttgtacatctatttaatgacaactttggt 42060800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 45154611 - 45154536
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttctta 260  Q
    ||||||||||||||||||||  |||||| ||||||||||   ||||| |||| | | ||||||||||||| ||||||    
T  45154611 agagaaatgatatttgtacaactatttt-tgacaacttttagataactttctctttcatactcacattatattctta 45154536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 4820155 - 4820232
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||  ||||||||||| |||| ||| |||||||| ||| ||||||| ||||||||||||||    
T  4820155 gagaaatgatatttgtacatccattttatgacatcttttgtacaaccttctctctcatactcatattatcttcttatt 4820232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 11881059 - 11880983
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttctta 260  Q
    |||||||||||||||||||| ||||||| | ||||||||   | ||| |||| ||| ||||||||||||||||||||    
T  11881059 agagaaatgatatttgtacaattattttttaacaacttttagacaactttctctctcatactcacattatcttctta 11880983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 18729361 - 18729283
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||   |||||   |||||||| ||| |||||||| | | ||||||||||||||||||||||    
T  18729361 agagaaatgatatttgtacaaccatttttgtacaacttttgtacaaccttctctttcatactcacattatcttcttatt 18729283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 24330054 - 24329976
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||| |||||||   |||||||| ||| ||| |||| ||| ||||||| ||||| ||||||||    
T  24330054 agagaaatgatatttgtacaattattttggtacaacttttgtacaactttctctctcatactcatattatgttcttatt 24329976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 39032676 - 39032598
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||   |||||   |||||||| ||| |||||||| ||| ||||||| ||||||||||||||    
T  39032676 agagaaatgatatttgtacaaccatttttgtacaacttttgtacaaccttctctctcatactcatattatcttcttatt 39032598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 34400619 - 34400691
Alignment:
Q  186 agaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttct 258  Q
    |||||||||||||||||| | |||||||||||| |||   | |||||||| ||| ||||||||||||| ||||    
T  34400619 agaaatgatatttgtacaatcattttatgacaattttttaacaaccttctctctcatactcacattatattct 34400691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 37821195 - 37821119
Alignment:
Q  186 agaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||| |||||   |||||   |||||||| ||| |||||||| ||| ||||||||||||||||||||||    
T  37821195 agaaatgatattcgtacaaccatttttatacaacttttgtacaaccttctctcttatactcacattatcttcttatt 37821119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 30420626 - 30420697
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatctt 256  Q
    ||||||||||||||||||||  ||||||||| || ||| ||| || ||||| ||| ||||| ||||||||||    
T  30420626 gagaaatgatatttgtacatccattttatgataatttttgtacaatcttctctctcatacttacattatctt 30420697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 125091 - 125169
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||  || ||| ||||||||||   ||||| |||| ||| |||||||||||||  |||||||    
T  125091 agagaaatgatatttgtacaactactttgtgacaactttttgataactttctttctaatactcacattattctcttatt 125169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 3031833 - 3031911
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||   |||||   |||||||| ||| ||| |||| | | ||||||||||||||||||||||    
T  3031833 agagaaatgatatttgtacaaccatttttgtacaacttttgtacaactttctctttcatactcacattatcttcttatt 3031911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 12401191 - 12401273
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    |||||||||||||||||||| | | ||| | ||||||||  || ||| |||| ||| |||||||||||||  |||||||||||    
T  12401191 agagaaatgatatttgtacaatcaatttgtaacaacttttttacaactttctctctcatactcacattatggtcttattatct 12401273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 12891168 - 12891090
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||   |||||   |||||||| ||| ||| |||| ||| ||| ||||||||||||||||||    
T  12891168 agagaaatgatatttgtacaaccatttttgcacaacttttgtacaacattctctctcatattcacattatcttcttatt 12891090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 15918061 - 15917999
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactca 247  Q
    ||||||||||||||||||| ||| ||| |||||||||| ||||||| || | ||| |||||||    
T  15918061 gagaaatgatatttgtacaattaatttgtgacaacttttgtataactttatctctcatactca 15917999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 19840058 - 19839988
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacattat 253  Q
    |||||||||||||||| ||||| |||||||||||| ||| || | ||| |||| ||| |||||||||||||    
T  19840058 agagaaatgatatttgaacattcattttatgacaatttttgtgacaactttctctctcatactcacattat 19839988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 22402698 - 22402660
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  22402698 agagaaatgatatttgaacatttattttgtgacaacttt 22402660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 34693288 - 34693210
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||| | |||||   | || ||| ||| || ||||| ||| ||||||||||||||||||||||    
T  34693288 agagaaatgatatttgtacaatcatttttgtataatttttgtacaatcttctctctcatactcacattatcttcttatt 34693210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 1107981 - 1108062
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    ||||||||||||||||||   |||||| | |||||||| ||| ||| || | ||| ||||||||||||| || |||||||||    
T  1107981 gagaaatgatatttgtacgactattttgttacaacttttgtacaactttatctctcatactcacattatgtttttattatct 1108062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 9933500 - 9933537
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaacttt 222  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  9933500 gagaaatgatatttgaacattcattttatgacaacttt 9933537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 19983841 - 19983874
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaa 218  Q
    ||||||||||||||||||| ||||||||||||||    
T  19983841 gagaaatgatatttgtacaattattttatgacaa 19983874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 35814452 - 35814517
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcaca 249  Q
    ||||||||||||||||||||   ||||| ||| |||||||||| ||| |||| ||| |||||||||    
T  35814452 agagaaatgatatttgtacaaccattttgtgataactttggtacaactttctttctcatactcaca 35814517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 252
Target Start/End: Original strand, 6517712 - 6517780
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacatta 252  Q
    ||||||||||||||| ||||  |||||||||||||||| || | ||| |||| ||| ||||||||||||    
T  6517712 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 6517780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 10372182 - 10372218
Alignment:
Q  189 aatgatatttgtacatttattttatgacaactttggt 225  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  10372182 aatgatatttgtacattcatttaatgacaactttggt 10372218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 262
Target Start/End: Original strand, 14126418 - 14126493
Alignment:
Q  187 gaaatgatatttgtacattta-ttttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||| | | ||||||| |||||||  || |||||||| ||| |||||||| |||||||||||||    
T  14126418 gaaatgatatttgtacaatcaattttatg-caacttttatacaaccttctctctcatactcactttatcttcttatt 14126493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 29803224 - 29803300
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttctta 260  Q
    ||||||||||||||||||||  |||||| ||||||||||   | ||| |||| ||| ||| ||||||||| ||||||    
T  29803224 agagaaatgatatttgtacaactattttttgacaacttttaaacaactttctctctcatattcacattatattctta 29803300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 204517 - 204441
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||| |||||| |||||||||| ||| |||||||  ||| ||||||||||||||||| ||||    
T  204517 agagaaatgatatttgtacatctattttctgacaacttttgtacaaccttc--tctcatactcacattatcttcctatt 204441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 145060 - 145142
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    ||||||||||||||||||||   |||||   |||||||| ||| ||| |||| ||| ||||||||||||||||||||||||||    
T  145060 agagaaatgatatttgtacaaccatttttgtacaacttttgtacaacattctctctcatactcacattatcttcttattatct 145142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 337117 - 337193
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttctta 260  Q
    ||||||||||||||||||||   ||||| |||||||||| | ||||| |||| ||| ||||||||||||| ||||||    
T  337117 agagaaatgatatttgtacaaccattttctgacaacttttgaataactttctctctcatactcacattatattctta 337193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 4314 - 4392
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||   ||||||||| ||||||   | ||| |||||||| ||||||||||||| ||||||||    
T  4314 agagaaatgatatttgtacaaccattttatgataactttttgacaactttctatctcatactcacattatattcttatt 4392  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 48657 - 48731
Alignment:
Q  188 aaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||| | |||||   |||| ||| ||| |||||||| ||| ||||||||||||||||||||||    
T  48657 aaatgatatttgtacaatcatttttgtacaatttttgtacaaccttctctctcatactcacattatcttcttatt 48731  T

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Target: chr6 (Bit Score: 35; Significance: 0.00000000009; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 27334857 - 27334923
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    ||||||||||||||||||||  |||||| |||||||||| ||||||| |||  ||| ||||||||||    
T  27334857 agagaaatgatatttgtacaactattttgtgacaacttttgtataactttccttctcatactcacat 27334923  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 27395597 - 27395663
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    ||||||||||||||||||||  |||||| |||||||||| ||||||| |||  ||| ||||||||||    
T  27395597 agagaaatgatatttgtacaactattttgtgacaacttttgtataactttccttctcatactcacat 27395663  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 253
Target Start/End: Complemental strand, 15722575 - 15722506
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattat 253  Q
    |||||||||||||||||||| | ||||| ||||||||||   | |||||||| ||| |||||||||||||    
T  15722575 agagaaatgatatttgtacaatcattttgtgacaactttttgacaaccttctctctcatactcacattat 15722506  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 32729888 - 32729964
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttctta 260  Q
    ||||||||||||||||||||   ||||| ||||||||||  || ||| |||| ||| ||||||||||||| ||||||    
T  32729888 agagaaatgatatttgtacaaccattttctgacaacttttatacaactttctctctcatactcacattatattctta 32729964  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 34792021 - 34792088
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacatt 251  Q
    |||||||||||||||||||| | |||||   |||||||| ||| |||||||| ||| |||||||||||    
T  34792021 agagaaatgatatttgtacaatcatttttgtacaacttttgtacaaccttctctctcatactcacatt 34792088  T

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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Original strand, 2943445 - 2943479
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaa 218  Q
    |||||||||||||||| ||||||||||||||||||    
T  2943445 agagaaatgatatttgaacatttattttatgacaa 2943479  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 3339571 - 3339505
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    ||||||||||||||||||||   ||||| |||||||||| ||| ||| |||| ||| ||||||||||    
T  3339571 agagaaatgatatttgtacaaccattttgtgacaacttttgtacaactttctctctcatactcacat 3339505  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 16337142 - 16337060
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttattatct 266  Q
    |||||||||||||||||||| | | |||||||||| |||   |  ||||||| ||| ||||||||||||  ||||||||||||    
T  16337142 agagaaatgatatttgtacaatcactttatgacaattttttgactaccttctctctcatactcacattacattcttattatct 16337060  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 17902764 - 17902698
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacat 250  Q
    |||||||||||||||||| |  || ||||||||||||||  || ||| |||| ||||||||||||||    
T  17902764 agagaaatgatatttgtataactaatttatgacaacttttatacaactttctctctgatactcacat 17902698  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 21506339 - 21506413
Alignment:
Q  188 aaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||   ||||| ||||||||||   | ||| |||| ||| ||||||||||||||||||||||    
T  21506339 aaatgatatttgtacaaccattttttgacaactttttgacaactttctctctcatactcacattatcttcttatt 21506413  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 30906735 - 30906697
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  30906735 agagaaatgatatttctacattcattttatgacaacttt 30906697  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 18141373 - 18141304
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacatta 252  Q
    |||||||||||||||  ||||| |||||||||||||||| || | ||| |||| ||| ||||||||||||    
T  18141373 agagaaatgatatttaaacattcattttatgacaacttttgtgacaactttctctctcatactcacatta 18141304  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 20822940 - 20822871
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacatta 252  Q
    |||||||||||||||| ||||  |||||||||||||||| || | ||| |||| ||| ||||||||||||    
T  20822940 agagaaatgatatttgaacatccattttatgacaacttttgtgacaactttctctctcatactcacatta 20822871  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 25924751 - 25924792
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaactttggt 225  Q
    |||| ||||||||||||||||| |||| ||||||||||||||    
T  25924751 agagcaatgatatttgtacattcatttaatgacaactttggt 25924792  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 27790306 - 27790229
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||   |||||   ||||||||  || |||||| | ||| ||||||||||||||||||||||    
T  27790306 gagaaatgatatttgtacaaccatttttgtacaacttttatacaaccttatctctcatactcacattatcttcttatt 27790229  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 35213632 - 35213564
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggt-ataaccttctatctgatactcacatta 252  Q
    ||||||||||||||| |||| |||||| |||||||||| || | ||| |||| ||| ||||||||||||    
T  35213632 gagaaatgatatttgaacatctattttgtgacaacttttgtaacaactttctctctcatactcacatta 35213564  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 6427 - 6504
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||||||  ||||||||||||||||   | ||| |||| ||| |||||||||||||  |||||||    
T  6427 gagaaatgatatttgtacatccattttatgacaactttttgacaacattctctctcatactcacattatactcttatt 6504  T

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Target: scaffold0221 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 8213 - 8251
Alignment:
Q  184 agagaaatgatatttgtacatttattttatgacaacttt 222  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  8213 agagaaatgatatttgaacattcattttatgacaacttt 8251  T

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Target: scaffold0041 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 34411 - 34485
Alignment:
Q  188 aaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||||  |||||| |||||||||||  | ||| |||| ||| |||||||||||||  |||||||    
T  34411 aaatgatatttgtacaactattttttgacaactttgtgacaactttctctctcatactcacattatactcttatt 34485  T

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Target: scaffold0514 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 1916 - 1839
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    |||||||||||||||||||   |||||   | |||||| ||| || ||||| ||| ||||||||||||||||||||||    
T  1916 gagaaatgatatttgtacaaccatttttgtataacttttgtacaatcttctctctcatactcacattatcttcttatt 1839  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 262
Target Start/End: Original strand, 6817 - 6894
Alignment:
Q  185 gagaaatgatatttgtacatttattttatgacaactttggtataaccttctatctgatactcacattatcttcttatt 262  Q
    ||||||||||||||| ||| | | ||||||||||||||   | ||| |||| ||| |||||||||||||| |||||||    
T  6817 gagaaatgatatttggacaatcaatttatgacaactttttgacaactttctctctcatactcacattatcctcttatt 6894  T

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