View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14747_low_19 (Length: 231)
Name: NF14747_low_19
Description: NF14747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14747_low_19 |
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Alignment Details
Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 16 - 212
Target Start/End: Original strand, 4210534 - 4210733
Alignment:
| Q |
16 |
ataattgacatctaacactattagcaatcatcttgagtcaggtatcacagaaaatccattaggtagttgtaagtcgttacataacagttagaacatgtaa |
115 |
Q |
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| T |
4210534 |
ataattgacatctaacactattagcaatcatcttgagtcaggtatcacagaaaatccattaggtagttgtaagtcgttacataacagttagaacatgtaa |
4210633 |
T |
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| Q |
116 |
agcttcggttaaagtttctgttactttgtgctatcagttgcc---tgtatatatacacagtatgagccaaacagtaagcaatcaaagcaaagatgatcca |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4210634 |
agcttcggttaaagtttctgttactttgtgctatcagttgcctggtgtatatatacacagtatgagccaaacagtaagcaatcaaagcaaagatgatcca |
4210733 |
T |
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