View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14747_low_20 (Length: 214)
Name: NF14747_low_20
Description: NF14747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14747_low_20 |
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Alignment Details
Target: chr1 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 69 - 196
Target Start/End: Original strand, 47552330 - 47552457
Alignment:
| Q |
69 |
gaatctgtgtgatttaatagtaaggcacgtgctgttatatatgagttgtgcgttgtacaaaaacaaaaatataagagttttttcttcttcttatgaacag |
168 |
Q |
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| T |
47552330 |
gaatctgtgtgatttaatagtaaggcacgtgctgttatatatgagttgtgcgttgtacaaaaacaaaaatataagagttttatcttcttcttatgaacag |
47552429 |
T |
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| Q |
169 |
aaaaaatatgcgttagtgcgttggatgt |
196 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
47552430 |
aaaaaatatgcgttagtgcgttggatgt |
47552457 |
T |
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