View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14749_high_7 (Length: 302)
Name: NF14749_high_7
Description: NF14749
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14749_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 18 - 262
Target Start/End: Original strand, 11930477 - 11930721
Alignment:
| Q |
18 |
attccacgcagtattttaatacttgcaacatgaagtgacacaaatataaataattggtaactataagtttcactcataagtgatcatataacaattcttt |
117 |
Q |
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| T |
11930477 |
attccacgcagtattttaatacttgcaacatgaagtgacacaaatataaataattggtaactataagtttcactcataagtgatcatataacaattcttt |
11930576 |
T |
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| Q |
118 |
catatatatttttctccctcatgacttttggtacagcattccccctagactataactaacaacaatatgtgacaaagatccgtgtatgaatgcttaattt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
11930577 |
catatatatttttctccctcatgacttttggtacagcattccccctagactataactaacaacaatatgtgacaaagatccatgtatgaatgcttaattt |
11930676 |
T |
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| Q |
218 |
gacatgaattggagtatgaccagacgcacacatgtgtaaagtgtg |
262 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
11930677 |
gacatgaattggagtatgaccaaacgcacacatgtgtaaagtgtg |
11930721 |
T |
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