View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1474_low_10 (Length: 201)
Name: NF1474_low_10
Description: NF1474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1474_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 23 - 185
Target Start/End: Complemental strand, 32727732 - 32727570
Alignment:
| Q |
23 |
ccaaatccaaacccttgggcatgcatttctgatgattttaacatcaatcagataattattaacatcaccaactccgcttctgcttcaacattcgctccag |
122 |
Q |
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| T |
32727732 |
ccaaatccaaacccttgggcatgcatttctgatgattttaacatcaatcagataattattaacatcatcaactccgcttctgcttcaacatttgctccag |
32727633 |
T |
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| Q |
123 |
cttcagttccaccaagtgtttctcttgctcaccaagaaaacatcaacaactttgatattgagc |
185 |
Q |
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| T |
32727632 |
cttcagttccaccaagtgtttctcttgctcaccaagaaaacatcaacaactttgatattgagc |
32727570 |
T |
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