View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14751_high_12 (Length: 356)
Name: NF14751_high_12
Description: NF14751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14751_high_12 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 18 - 356
Target Start/End: Original strand, 36373414 - 36373753
Alignment:
| Q |
18 |
actttgacgtaacgtgaaagattgaaatcttctcatcaaacgatctgcattctgataatcatcatcaaggtacgtttttcttatcaaatttaatttacat |
117 |
Q |
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| T |
36373414 |
actttgacgtaacgtgaaagattgaaatcttctcatcaaacgatctgcattctgataatcatcatcaaggtacgtttttctcatcaaatttaatttacat |
36373513 |
T |
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| Q |
118 |
ttcaataattctttgtacacgattcaaattttgttatcaagtatagcctaatttctctaatgtgttacaaatgttacaattttgcctaatctcatgtcac |
217 |
Q |
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| T |
36373514 |
ttcaataattctttgttcacgattcaaattctgttatcaagtatagcctaatttctctaatgtgttacaaatgttacaattttgcctaatctcatgtcac |
36373613 |
T |
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| Q |
218 |
gttcaatttatactatgatcgtaaaattcttgttgaattttcaatatattacgtggatcattgaattcttgatagtttcttg-nnnnnnnagtggcaatt |
316 |
Q |
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| T |
36373614 |
gttcaatttatactatgatcgtaaaattcttgttgaattttcaatatattacgtggatcattgaattcttgatagtttcttgttttttttagtggcaatt |
36373713 |
T |
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| Q |
317 |
tgaatttgaacgtgacagaaacttatgagaataatctacc |
356 |
Q |
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| T |
36373714 |
tgaatttgaacgtgacagaaacttatgaaaataatgtacc |
36373753 |
T |
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