View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14751_high_22 (Length: 252)
Name: NF14751_high_22
Description: NF14751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14751_high_22 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 26893611 - 26893854
Alignment:
| Q |
1 |
tgaaacaagtatgtaattaaaaaacctaaacatgattacgtgtctatgcatataataacattttgaatatgatcaatgtataaagacaatgacctaaaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
26893611 |
tgaaacaagtatgtaattaaaaaacctacacatgattaagtgtctatgcatataataacattttgaatatgatcaatgtataaagacaatgaactaaaaa |
26893710 |
T |
|
| Q |
101 |
taatagtgtaacnnnnnnncgaaagagcatatataaacaatttcttaatttacagcatcactatctacatgcaaggtatttgagtagcataatttagagg |
200 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
26893711 |
taatagtgtaacaaaaaaacgaaagagc--atataaacaatttcttaatttacaccataactatctacatgcaaggtatttgagtagcataatttcgagg |
26893808 |
T |
|
| Q |
201 |
aaatgtcaaaccaacttgttcaatatctcgctcaagacctccatta |
246 |
Q |
| |
|
||| || ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26893809 |
aaaagttaaaccaacttgttcaatatctcgctcaagacctccatta |
26893854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University