View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14751_high_25 (Length: 233)
Name: NF14751_high_25
Description: NF14751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14751_high_25 |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 51732212 - 51731988
Alignment:
| Q |
1 |
ctaaactcaaaataatgactagtactctagtaggatgacttatcaatcatgcatccaatattttgtatactcttgtcgttagttaacattttttaaagaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51732212 |
ctaaactcaaaataatgactagtactctagtaggatgacttatcaatcatgcatccaatattttgtatactcttgtcgttagttaacattttttaaagaa |
51732113 |
T |
|
| Q |
101 |
aaataggaaagtaattatatatatacaca----cacaaacaagttgattatttttattggattgtcaaatattaaaattatttggtaatttgacaaataa |
196 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51732112 |
aaataggaaagtaattatatatatacacacacacacaaacaagttgattatttttattggattgtcaaatattaaaattatttggtaatttgacaaataa |
51732013 |
T |
|
| Q |
197 |
tttgaatgagcgtatgtgcattatg |
221 |
Q |
| |
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||||||||||||||||||||||||| |
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|
| T |
51732012 |
tttgaatgagcgtatgtgcattatg |
51731988 |
T |
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