View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14751_high_26 (Length: 219)
Name: NF14751_high_26
Description: NF14751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14751_high_26 |
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Alignment Details
Target: chr2 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 42965819 - 42965760
Alignment:
| Q |
38 |
taaatctagcataatttgaaaacatttactcatccgtaactaaaaatcgttatcttgcat |
97 |
Q |
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| T |
42965819 |
taaatctaacataatttgaaaacatttactcatccgtaactaaaaatcgttatcttgcat |
42965760 |
T |
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Target: chr2; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 42965683 - 42965639
Alignment:
| Q |
175 |
tgggttagagtatccattctatagcattcagtaagccaataaaaa |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42965683 |
tgggttagagtatccattctatagcattcagtaagccaataaaaa |
42965639 |
T |
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