View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14751_low_10 (Length: 393)
Name: NF14751_low_10
Description: NF14751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14751_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 4 - 326
Target Start/End: Original strand, 52477036 - 52477358
Alignment:
| Q |
4 |
tctcaaattctaagttcctctttgttactgttattttcactataactataaattgtcatcaagaacccgcatgtcttaaagttttggggtgaagatgtta |
103 |
Q |
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| T |
52477036 |
tctcaaattctaagttcctctttgttactgttattttcactataactataaattgtcatcaagaacccgcatgtcttaaagttttggggtgaagatgtta |
52477135 |
T |
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| Q |
104 |
tgtccaattttatttatgtgatagctcaaagactaatatgatggttcccagagtcccttgaagaaagcatgaatttgtttatatatattcatttattgaa |
203 |
Q |
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| T |
52477136 |
tgtccaatttcatttatgtgatagctcaaagactaatatgatggttcccagagtcccttgaagaaaacatgaatttgtttatatatattcatttattgaa |
52477235 |
T |
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| Q |
204 |
acaagttaatgttaatttattttagtttctacattatggcgacgaggtcacgtcacatgctcactgcatagtgtctaagtgcaagtgttggtttatatga |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52477236 |
acaagttaatgttaatttattttagtttctacattatggcgacgaggtcatgtcacatgctcactgcatagtgtctaagtgcaagtgttggtttatatga |
52477335 |
T |
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| Q |
304 |
gtgacgtttagttggatagaata |
326 |
Q |
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||||||||||||||||||||||| |
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| T |
52477336 |
gtgacgtttagttggatagaata |
52477358 |
T |
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