View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14751_low_16 (Length: 350)
Name: NF14751_low_16
Description: NF14751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14751_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 42965568 - 42965244
Alignment:
| Q |
1 |
caaattaaaatcacatattaactaagtatattatattatttgaatgaaaaaaggtacgaatag--gtagttgggtgtcctaatactaatagctaatgacc |
98 |
Q |
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| T |
42965568 |
caaattaaaatcacatattaacta--tat-ttatattatttgaatgaaaaaaggtacgaatagaggtagttgggtgtcctaata------gctaatgacc |
42965478 |
T |
|
| Q |
99 |
catatttctcataataatgatacattattatattaccttaatttgcctaaggatcatactaggatgtagacatatcttaggtatttatatatgttgtgca |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |
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| T |
42965477 |
catatttctcataataatgatacattattatattaccttaatttgcctaaggatcatactacgatgtagacatattttaggtatttatatatgttgtgca |
42965378 |
T |
|
| Q |
199 |
cacacaaaacaagaccaaccaaaggaagccacttagaggttgcaaatcagcttcttcggtgagtgagtgagtgctcttctgtcactgtatacccaccaat |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42965377 |
cacacaaaacaagaccaaccaaaggaagccacttagaggttgcaaatcagcttcttcggtgagtgagtgagtgctcttctgtcactgtatacccaccaat |
42965278 |
T |
|
| Q |
299 |
ggcaactcttggtgctgtcaaattcctgctctgt |
332 |
Q |
| |
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|||||||||||||||||||||||||||||||||| |
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| T |
42965277 |
ggcaactcttggtgctgtcaaattcctgctctgt |
42965244 |
T |
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