View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14751_low_32 (Length: 208)
Name: NF14751_low_32
Description: NF14751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14751_low_32 |
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Alignment Details
Target: chr4 (Bit Score: 132; Significance: 9e-69; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 47583603 - 47583784
Alignment:
| Q |
17 |
tagatgtatttttcagcgcgagttaacattgtcatttattttgaaatttccttcannnnnnnnaacaacgaacaatat--tttattcaaatagataaaga |
114 |
Q |
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| T |
47583603 |
tagatgtatttttcagcgcaagttaacattgtcatttattttgaaatttccttcattttttttaacaacgaacaaaatcttttattcaaatagataa-ga |
47583701 |
T |
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| Q |
115 |
tataagtaataatactctatccactcaaaattcccaatacatcatttcctaccgatacaatctacacaaaataaacaaggata |
197 |
Q |
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| T |
47583702 |
tataagtaataatactctatccactcaaaattcccaatacatcatttcctaccgatacaatctacacaaaataaacaaggata |
47583784 |
T |
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