View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14752_high_13 (Length: 318)

Name: NF14752_high_13
Description: NF14752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14752_high_13
NF14752_high_13
[»] chr1 (26 HSPs)
chr1 (23-182)||(46768990-46769153)
chr1 (204-305)||(6313570-6313670)
chr1 (204-305)||(25613086-25613186)
chr1 (204-305)||(29395538-29395638)
chr1 (204-305)||(9321619-9321720)
chr1 (204-305)||(28386558-28386659)
chr1 (203-305)||(49231978-49232079)
chr1 (204-305)||(51702588-51702688)
chr1 (211-305)||(29220106-29220202)
chr1 (204-305)||(48198941-48199041)
chr1 (204-305)||(48207524-48207624)
chr1 (204-305)||(20111682-20111782)
chr1 (204-305)||(46328960-46329062)
chr1 (204-305)||(5494258-5494358)
chr1 (208-305)||(38535261-38535357)
chr1 (208-305)||(38557479-38557575)
chr1 (197-305)||(45273555-45273663)
chr1 (203-242)||(48176645-48176684)
chr1 (204-270)||(25830360-25830426)
chr1 (207-291)||(8139980-8140063)
chr1 (204-240)||(15835374-15835410)
chr1 (204-239)||(1923096-1923131)
chr1 (199-234)||(18799413-18799448)
chr1 (204-239)||(49197761-49197796)
chr1 (198-239)||(29209508-29209549)
chr1 (204-232)||(47781325-47781353)
[»] chr8 (24 HSPs)
chr8 (200-305)||(4030439-4030544)
chr8 (204-305)||(14781248-14781348)
chr8 (204-305)||(18957834-18957934)
chr8 (205-305)||(44724898-44724997)
chr8 (204-305)||(18305077-18305177)
chr8 (208-305)||(19716983-19717081)
chr8 (204-305)||(20831080-20831180)
chr8 (197-305)||(37857872-37857978)
chr8 (204-305)||(32498885-32498985)
chr8 (208-305)||(42304745-42304843)
chr8 (211-305)||(43307661-43307754)
chr8 (204-305)||(16365271-16365371)
chr8 (204-305)||(39466634-39466734)
chr8 (206-305)||(31626294-31626392)
chr8 (251-305)||(7467401-7467455)
chr8 (262-305)||(10294564-10294607)
chr8 (207-305)||(40012297-40012395)
chr8 (204-242)||(34893414-34893452)
chr8 (206-242)||(9287608-9287644)
chr8 (260-305)||(35143072-35143117)
chr8 (254-305)||(5266790-5266841)
chr8 (208-242)||(10294516-10294550)
chr8 (198-239)||(42366948-42366989)
chr8 (203-239)||(30381821-30381857)
[»] chr5 (15 HSPs)
chr5 (204-305)||(13999214-13999315)
chr5 (204-305)||(13926926-13927027)
chr5 (204-305)||(4239580-4239681)
chr5 (204-305)||(40012817-40012918)
chr5 (202-305)||(13717089-13717191)
chr5 (209-305)||(1459300-1459396)
chr5 (194-305)||(1151390-1151500)
chr5 (204-305)||(7947134-7947234)
chr5 (204-305)||(39853346-39853446)
chr5 (204-305)||(4549364-4549466)
chr5 (204-305)||(37014850-37014951)
chr5 (199-305)||(17519503-17519608)
chr5 (254-305)||(5950112-5950163)
chr5 (206-242)||(5950470-5950506)
chr5 (204-240)||(28593000-28593036)
[»] chr3 (37 HSPs)
chr3 (204-305)||(11432541-11432641)
chr3 (204-305)||(36673260-36673360)
chr3 (205-305)||(23752504-23752604)
chr3 (204-305)||(10728125-10728227)
chr3 (204-305)||(17947212-17947314)
chr3 (208-305)||(10661181-10661278)
chr3 (204-305)||(45254555-45254655)
chr3 (204-305)||(31645364-31645464)
chr3 (208-305)||(44904961-44905057)
chr3 (204-305)||(52617087-52617187)
chr3 (203-305)||(50761221-50761324)
chr3 (204-305)||(18750627-18750729)
chr3 (204-305)||(50902418-50902522)
chr3 (207-305)||(51736870-51736968)
chr3 (204-305)||(39841555-39841656)
chr3 (200-305)||(20833892-20833996)
chr3 (204-305)||(54629844-54629947)
chr3 (252-305)||(34483252-34483305)
chr3 (204-305)||(40898063-40898162)
chr3 (208-305)||(39039070-39039168)
chr3 (255-305)||(52811375-52811425)
chr3 (260-305)||(50902516-50902561)
chr3 (254-305)||(48380134-48380185)
chr3 (204-291)||(27239327-27239412)
chr3 (200-305)||(44707931-44708036)
chr3 (206-242)||(37455892-37455928)
chr3 (254-305)||(5493041-5493092)
chr3 (198-241)||(34483193-34483236)
chr3 (260-305)||(45214139-45214184)
chr3 (205-242)||(48380206-48380243)
chr3 (204-239)||(7319139-7319174)
chr3 (204-239)||(24149837-24149872)
chr3 (197-240)||(45925777-45925820)
chr3 (201-239)||(29448433-29448471)
chr3 (252-305)||(2124752-2124805)
chr3 (204-232)||(26108496-26108524)
chr3 (203-239)||(27593998-27594034)
[»] chr7 (38 HSPs)
chr7 (206-305)||(29613906-29614005)
chr7 (204-305)||(23102285-23102385)
chr7 (198-305)||(18839288-18839394)
chr7 (204-305)||(29893950-29894051)
chr7 (204-305)||(3023919-3024018)
chr7 (205-305)||(12741367-12741467)
chr7 (204-305)||(28343304-28343404)
chr7 (204-305)||(30823581-30823681)
chr7 (204-305)||(510640-510742)
chr7 (197-305)||(37971497-37971606)
chr7 (204-305)||(21068350-21068452)
chr7 (204-305)||(39785090-39785192)
chr7 (204-305)||(9881401-9881500)
chr7 (208-305)||(7994150-7994246)
chr7 (203-305)||(12893107-12893210)
chr7 (198-305)||(37328820-37328927)
chr7 (204-305)||(40459833-40459933)
chr7 (251-305)||(28034286-28034340)
chr7 (204-305)||(48136362-48136462)
chr7 (204-305)||(39029047-39029147)
chr7 (207-305)||(32884747-32884850)
chr7 (207-305)||(46035452-46035550)
chr7 (260-305)||(33383635-33383680)
chr7 (260-305)||(33891402-33891447)
chr7 (260-305)||(44255947-44255992)
chr7 (201-239)||(3635187-3635225)
chr7 (204-242)||(28034232-28034270)
chr7 (200-242)||(47067746-47067788)
chr7 (260-305)||(26183088-26183133)
chr7 (205-242)||(46405302-46405339)
chr7 (204-236)||(33891384-33891416)
chr7 (204-234)||(26183121-26183151)
chr7 (204-234)||(33383668-33383698)
chr7 (260-305)||(27417703-27417748)
chr7 (260-305)||(35089152-35089197)
chr7 (202-234)||(44255927-44255959)
chr7 (204-232)||(47879770-47879798)
chr7 (204-232)||(47914848-47914876)
[»] scaffold0054 (1 HSPs)
scaffold0054 (205-305)||(36401-36501)
[»] chr4 (27 HSPs)
chr4 (204-305)||(27769058-27769158)
chr4 (205-305)||(32323063-32323163)
chr4 (204-305)||(32683135-32683235)
chr4 (204-305)||(50019185-50019285)
chr4 (204-305)||(48262069-48262169)
chr4 (204-305)||(54342141-54342241)
chr4 (201-305)||(23988191-23988294)
chr4 (205-305)||(29649131-29649230)
chr4 (205-305)||(49833973-49834073)
chr4 (204-305)||(5442387-5442485)
chr4 (201-305)||(41726100-41726203)
chr4 (201-305)||(48531918-48532021)
chr4 (206-305)||(37827533-37827636)
chr4 (204-305)||(38234597-38234697)
chr4 (204-305)||(49500640-49500740)
chr4 (251-305)||(5801699-5801753)
chr4 (204-305)||(30966185-30966285)
chr4 (255-305)||(28484866-28484916)
chr4 (251-305)||(51321850-51321904)
chr4 (204-242)||(37916864-37916902)
chr4 (204-242)||(51321923-51321961)
chr4 (252-288)||(37916808-37916844)
chr4 (204-239)||(5105001-5105036)
chr4 (204-234)||(54852661-54852691)
chr4 (204-233)||(16019913-16019942)
chr4 (203-239)||(25446714-25446750)
chr4 (204-240)||(37369432-37369468)
[»] chr2 (23 HSPs)
chr2 (204-305)||(18178266-18178366)
chr2 (204-305)||(26789779-26789879)
chr2 (204-305)||(25289149-25289249)
chr2 (206-305)||(43079477-43079576)
chr2 (203-305)||(28845572-28845673)
chr2 (205-305)||(13832669-13832769)
chr2 (210-306)||(7027898-7027993)
chr2 (204-305)||(33136588-33136691)
chr2 (204-305)||(3464581-3464681)
chr2 (204-305)||(10658424-10658524)
chr2 (204-242)||(214625-214663)
chr2 (204-242)||(379966-380004)
chr2 (260-305)||(28739187-28739232)
chr2 (204-239)||(20156344-20156379)
chr2 (204-242)||(30239161-30239199)
chr2 (257-305)||(3576753-3576800)
chr2 (208-242)||(2374033-2374067)
chr2 (199-229)||(12408018-12408048)
chr2 (199-229)||(12420078-12420108)
chr2 (260-305)||(45547901-45547946)
chr2 (204-232)||(1188676-1188704)
chr2 (210-242)||(3576811-3576843)
chr2 (203-239)||(34027516-34027552)
[»] scaffold0940 (1 HSPs)
scaffold0940 (204-305)||(3574-3674)
[»] chr6 (11 HSPs)
chr6 (204-305)||(30384172-30384272)
chr6 (204-305)||(31068414-31068514)
chr6 (204-305)||(31896631-31896731)
chr6 (205-305)||(14261552-14261651)
chr6 (204-305)||(4199587-4199688)
chr6 (204-305)||(7104518-7104618)
chr6 (204-305)||(8790012-8790112)
chr6 (204-305)||(7498084-7498194)
chr6 (251-305)||(34774379-34774433)
chr6 (252-305)||(27585232-27585285)
chr6 (203-239)||(23929374-23929410)
[»] scaffold0042 (1 HSPs)
scaffold0042 (204-305)||(57170-57270)
[»] scaffold0839 (1 HSPs)
scaffold0839 (205-305)||(3114-3214)
[»] scaffold1521 (1 HSPs)
scaffold1521 (204-305)||(1292-1393)
[»] scaffold0383 (1 HSPs)
scaffold0383 (204-305)||(16147-16248)
[»] scaffold0152 (2 HSPs)
scaffold0152 (204-305)||(29326-29427)
scaffold0152 (260-305)||(20430-20475)
[»] scaffold0095 (1 HSPs)
scaffold0095 (206-305)||(21767-21865)
[»] scaffold0110 (1 HSPs)
scaffold0110 (204-305)||(38750-38853)
[»] scaffold0492 (1 HSPs)
scaffold0492 (204-240)||(12094-12130)
[»] scaffold0287 (1 HSPs)
scaffold0287 (201-239)||(10860-10898)


Alignment Details
Target: chr1 (Bit Score: 114; Significance: 8e-58; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 23 - 182
Target Start/End: Complemental strand, 46769153 - 46768990
Alignment:
Q  23 ggatgcatgtaaaacaacagggtgtcaaaggtagttataatgctttcatgaactttagaatgaactaaatcaattac-nnnnnnnnaattaaccatccag 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||         ||||||||||||||    
T  46769153 ggatgcatgtaaaacaacagggtgtcaaaggtagttataatgctttcatgaactttagaatgaacttaatcaattactttttttttaattaaccatccag 46769054  T
Q  122 tttatagtaaaggatttttcatatgaagctcacta---atagccccttgatcaattacttttaa 182  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  46769053 tttatagtaaaggatttttcatatgaagctcactaatcatagccccttgatcaattacttttaa 46768990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 6313670 - 6313570
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6313670 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 6313572  T
Q  304 aa 305  Q
    ||    
T  6313571 aa 6313570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 25613186 - 25613086
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25613186 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 25613088  T
Q  304 aa 305  Q
    ||    
T  25613087 aa 25613086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 29395538 - 29395638
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29395538 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 29395636  T
Q  304 aa 305  Q
    ||    
T  29395637 aa 29395638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 9321619 - 9321720
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||| ||| |||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9321619 ggggtgtattgaattgggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 9321718  T
Q  304 aa 305  Q
    ||    
T  9321719 aa 9321720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 28386558 - 28386659
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  28386558 ggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattctattgattttgtgagatttt 28386657  T
Q  304 aa 305  Q
    ||    
T  28386658 aa 28386659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 203 - 305
Target Start/End: Complemental strand, 49232079 - 49231978
Alignment:
Q  203 aggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattt 302  Q
    ||||||||||||||||||||||||||||||| ||||||||        |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  49232079 aggggtgtattggattaggattttaaaagacaattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattt 49231981  T
Q  303 taa 305  Q
    |||    
T  49231980 taa 49231978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 51702688 - 51702588
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||| |||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  51702688 ggggtgtataggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 51702590  T
Q  304 aa 305  Q
    ||    
T  51702589 aa 51702588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 305
Target Start/End: Complemental strand, 29220202 - 29220106
Alignment:
Q  211 attggattaggattttaaaagactattttaatnnnnnnnn--gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||||||| |||||||||||||||||||||          |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29220202 attggattagaattttaaaagactattttaataaaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaa 29220106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 48199041 - 48198941
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||||||||||||||||||||||| ||||||         |||||||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  48199041 ggggtgtattggattaggattttaaaagacttttttaa-caaaaaaagtctttaagattttaaaagactttgtgggattgtattgattctgtgagatttt 48198943  T
Q  304 aa 305  Q
    ||    
T  48198942 aa 48198941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 48207624 - 48207524
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||||||||||||||||||||||| ||||||         |||||||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  48207624 ggggtgtattggattaggattttaaaagacttttttaa-caaaaaaagtctttaagattttaaaagactttgtgggattgtattgattctgtgagatttt 48207526  T
Q  304 aa 305  Q
    ||    
T  48207525 aa 48207524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 20111682 - 20111782
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||| ||||| ||||||||||||||||||||||        |||||||| ||||||||||||| |||||||||||| |||||||||||||||||    
T  20111682 ggggtgtatttgattacgattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactttgtgagattgtactgattctgtgagatttt 20111780  T
Q  304 aa 305  Q
    ||    
T  20111781 aa 20111782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 46329062 - 46328960
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaa-attttaaaagactgtgtgagattgtattgattctgtgagattt 302  Q
    |||||||||||||||||||||||||||||||||||||||         | |||  | |||| ||||||||||||||||||||||||||||||||||||||    
T  46329062 ggggtgtattggattaggattttaaaagactattttaataaataaaaatgtttttagatttcaaaagactgtgtgagattgtattgattctgtgagattt 46328963  T
Q  303 taa 305  Q
    |||    
T  46328962 taa 46328960  T

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Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 5494258 - 5494358
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||| ||||| ||||||||||| |||||||||        || ||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  5494258 ggggtgtattgaattagaattttaaaagattattttaataaaagaa-gtatttaagattttaaaagactctgtgagattgtattgattatgtgagatttt 5494356  T
Q  304 aa 305  Q
    ||    
T  5494357 aa 5494358  T

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Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 38535261 - 38535357
Alignment:
Q  208 tgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||||||||||||||||||| |||||||||        || ||||| |||||||||| |||||| |||||||||||||||| |||||||||||    
T  38535261 tgtattggattaggattttaaaagattattttaataaaaaaa-gtatttaagattttaaaagtctgtgttagattgtattgattctatgagattttaa 38535357  T

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Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 38557479 - 38557575
Alignment:
Q  208 tgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||||||||||||||||||| |||||||||        || ||||| |||||||||| |||||| |||||||||||||||| |||||||||||    
T  38557479 tgtattggattaggattttaaaagattattttaataaaaaaa-gtatttaagattttaaaagtctgtgttagattgtattgattctatgagattttaa 38557575  T

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Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 45273663 - 45273555
Alignment:
Q  197 aaacttagg-ggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgt 295  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||        || ||||| ||||||||||||| | ||||||| |||||||| | |    
T  45273663 aaacttaggaggtgtattggattaggattttaaaagattattttaat-aaaaaaagtttttaagattttaaaagactatatgagattatattgattttat 45273565  T
Q  296 gagattttaa 305  Q
    ||||||||||    
T  45273564 gagattttaa 45273555  T

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Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 48176645 - 48176684
Alignment:
Q  203 aggggtgtattggattaggattttaaaagactattttaat 242  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48176645 aggggtgtattggattaggattttaaaagactattttaat 48176684  T

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Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 25830360 - 25830426
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaaga 270  Q
    ||||||||||| |||||||||||||||||||||||||||        ||||||||||||||||||||    
T  25830360 ggggtgtattgaattaggattttaaaagactattttaataaaaaaaagtctttaaaattttaaaaga 25830426  T

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Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 291
Target Start/End: Original strand, 8139980 - 8140063
Alignment:
Q  207 gtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgatt 291  Q
    |||||||||||||  |||||||||||||||||||||         ||||||| ||||||||||| ||||||||||||||||||||    
T  8139980 gtgtattggattaaaattttaaaagactattttaatataaaata-tctttaagattttaaaagattgtgtgagattgtattgatt 8140063  T

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Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 15835410 - 15835374
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactatttta 240  Q
    |||||||||||||||||||||||||||||||||||||    
T  15835410 ggggtgtattggattaggattttaaaagactatttta 15835374  T

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Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 239
Target Start/End: Original strand, 1923096 - 1923131
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactatttt 239  Q
    ||||||||||||||||||||||||||||||||||||    
T  1923096 ggggtgtattggattaggattttaaaagactatttt 1923131  T

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Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 234
Target Start/End: Complemental strand, 18799448 - 18799413
Alignment:
Q  199 acttaggggtgtattggattaggattttaaaagact 234  Q
    |||| |||||||||||||||||||||||||||||||    
T  18799448 actttggggtgtattggattaggattttaaaagact 18799413  T

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Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 239
Target Start/End: Original strand, 49197761 - 49197796
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactatttt 239  Q
    |||||||||||||||||||||||||||||| |||||    
T  49197761 ggggtgtattggattaggattttaaaagacaatttt 49197796  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 29209549 - 29209508
Alignment:
Q  198 aacttaggggtgtattggattaggattttaaaagactatttt 239  Q
    |||||||||||||||| ||||||||||||||| ||| |||||    
T  29209549 aacttaggggtgtattagattaggattttaaaggacaatttt 29209508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 232
Target Start/End: Complemental strand, 47781353 - 47781325
Alignment:
Q  204 ggggtgtattggattaggattttaaaaga 232  Q
    |||||||||||||||||||||||||||||    
T  47781353 ggggtgtattggattaggattttaaaaga 47781325  T

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Target: chr8 (Bit Score: 74; Significance: 6e-34; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 200 - 305
Target Start/End: Original strand, 4030439 - 4030544
Alignment:
Q  200 cttaggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgaga 299  Q
    |||||||||||||| ||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4030439 cttaggggtgtattagattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgaga 4030538  T
Q  300 ttttaa 305  Q
    ||||||    
T  4030539 ttttaa 4030544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 14781248 - 14781348
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14781248 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 14781346  T
Q  304 aa 305  Q
    ||    
T  14781347 aa 14781348  T

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Target: chr8; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 18957834 - 18957934
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18957834 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 18957932  T
Q  304 aa 305  Q
    ||    
T  18957933 aa 18957934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 44724898 - 44724997
Alignment:
Q  205 gggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttta 304  Q
    ||||||||||||||||||||||||||||||||||||||        |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44724898 gggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttta 44724996  T

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Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 18305077 - 18305177
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||| ||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18305077 ggggtgtattggattaggattttaaaagacaattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 18305175  T
Q  304 aa 305  Q
    ||    
T  18305176 aa 18305177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 19716983 - 19717081
Alignment:
Q  208 tgtattggattaggattttaaaagactattttaatnnnnnnnn-gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||||||||||||||||||||||||||||||||         |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19716983 tgtattggattaggattttaaaagactattttaataaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaa 19717081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 20831080 - 20831180
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||| ||||||||||||||||||||||| |||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20831080 ggggtgtattgaattaggattttaaaagactattt-aataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 20831178  T
Q  304 aa 305  Q
    ||    
T  20831179 aa 20831180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 37857978 - 37857872
Alignment:
Q  197 aaacttaggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtg 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||        | |||||| ||||||||||||  | |||||||||||||||||||||    
T  37857978 aaacttaggggtgtattggattaggattttaaaagactattttaataaaaaaaagactttaagattttaaaagac--tatgagattgtattgattctgtg 37857881  T
Q  297 agattttaa 305  Q
    |||||||||    
T  37857880 agattttaa 37857872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 32498985 - 32498885
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  32498985 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctaagagatttt 32498887  T
Q  304 aa 305  Q
    ||    
T  32498886 aa 32498885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 42304745 - 42304843
Alignment:
Q  208 tgtattggattaggattttaaaagactattttaatnnnnnnnn-gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||||||||||||||||||||||||||||||||         |||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  42304745 tgtattggattaggattttaaaagactattttaataaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattttgtgagattttaa 42304843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 305
Target Start/End: Original strand, 43307661 - 43307754
Alignment:
Q  211 attggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||| ||||||||||||||||||||||        |||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  43307661 attggattaagattttaaaagactattttaataaaaaga-gtctttaagattttaaaagactgtgtgagattggattgattctgtgagattttaa 43307754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 16365371 - 16365271
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||| |||||||||||||||||| ||||||||        |||||||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  16365371 ggggtgtattgaattaggattttaaaagacaattttaataaaaaaa-gtctttaagattttaaaagactttgtgcgattgtattgattctgtgagatttt 16365273  T
Q  304 aa 305  Q
    ||    
T  16365272 aa 16365271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 39466634 - 39466734
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||| |||||||||||| |||||||||        |||||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  39466634 ggggtgtattggattaagattttaaaagattattttaataaaaaaa-gtctttaagattttaaaagactctgtgatattgtattgattctgtgagatttt 39466732  T
Q  304 aa 305  Q
    ||    
T  39466733 aa 39466734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 31626392 - 31626294
Alignment:
Q  206 ggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||| |||||||||||||||||||| |||||||||||        || ||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  31626392 ggtgcattggattaggattttaaaacactattttaataaaaaaa-gtatttaagattttaaaagattgtgtgagattgtattgattctgtgagattttaa 31626294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 7467455 - 7467401
Alignment:
Q  251 gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  7467455 gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagaatttaa 7467401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 10294564 - 10294607
Alignment:
Q  262 tttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  10294564 tttaaaagactgtgtgagattgtattgattctgtgagattttaa 10294607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 305
Target Start/End: Original strand, 40012297 - 40012395
Alignment:
Q  207 gtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||||||| |||||||||| |||||||||||        |||||| | ||||||||||| | ||||||||||||| |||| |||||||||||||    
T  40012297 gtgtattggattaagattttaaaatactattttaataaaaacaagtctttgagattttaaaagagtttgtgagattgtatcgattttgtgagattttaa 40012395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 34893452 - 34893414
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaat 242  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34893452 ggggtgtattggattaggattttaaaagactattttaat 34893414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 9287608 - 9287644
Alignment:
Q  206 ggtgtattggattaggattttaaaagactattttaat 242  Q
    |||||||||||||||||||||||||||||||||||||    
T  9287608 ggtgtattggattaggattttaaaagactattttaat 9287644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 35143117 - 35143072
Alignment:
Q  260 attttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||||||| ||| |||||||||||||| |||||||||||||    
T  35143117 attttaaaagactctgtaagattgtattgattttgtgagattttaa 35143072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 305
Target Start/End: Original strand, 5266790 - 5266841
Alignment:
Q  254 tttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||| ||||||||||||| ||||||||| |||||||| |||| ||||||||    
T  5266790 tttaagattttaaaagactttgtgagattatattgattttgtgggattttaa 5266841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 242
Target Start/End: Original strand, 10294516 - 10294550
Alignment:
Q  208 tgtattggattaggattttaaaagactattttaat 242  Q
    ||||||||||||||||||||||| |||||||||||    
T  10294516 tgtattggattaggattttaaaacactattttaat 10294550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 42366989 - 42366948
Alignment:
Q  198 aacttaggggtgtattggattaggattttaaaagactatttt 239  Q
    |||||||||||||||||||||  ||||||||| |||||||||    
T  42366989 aacttaggggtgtattggattgagattttaaatgactatttt 42366948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 30381821 - 30381857
Alignment:
Q  203 aggggtgtattggattaggattttaaaagactatttt 239  Q
    ||||||||||||||||  |||||||||||||||||||    
T  30381821 aggggtgtattggattgagattttaaaagactatttt 30381857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 6e-34; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 13999214 - 13999315
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13999214 ggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 13999313  T
Q  304 aa 305  Q
    ||    
T  13999314 aa 13999315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 13927027 - 13926926
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  13927027 ggggtgtattggattaggattttaaaagactattttaataaataaaagtctttaagatttaaaaagactgtgtgagattgtattgattctgtgagatttt 13926928  T
Q  304 aa 305  Q
    ||    
T  13926927 aa 13926926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 4239580 - 4239681
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||| |||| |||||||||||||||    
T  4239580 ggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattttattaattctgtgagatttt 4239679  T
Q  304 aa 305  Q
    ||    
T  4239680 aa 4239681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 40012817 - 40012918
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  40012817 ggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagacagtgtgagattgtattgattttgtgagatttt 40012916  T
Q  304 aa 305  Q
    ||    
T  40012917 aa 40012918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 202 - 305
Target Start/End: Complemental strand, 13717191 - 13717089
Alignment:
Q  202 taggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatt 301  Q
    |||||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||| |||||||||||||||||||| |||||||||    
T  13717191 taggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagattgtgtgagattgtattgattttgtgagatt 13717093  T
Q  302 ttaa 305  Q
    ||||    
T  13717092 ttaa 13717089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 209 - 305
Target Start/End: Original strand, 1459300 - 1459396
Alignment:
Q  209 gtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||| |||||||||||||||||||||||||||        |||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  1459300 gtattgaattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattatgtgagattttaa 1459396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 194 - 305
Target Start/End: Original strand, 1151390 - 1151500
Alignment:
Q  194 aggaaacttaggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattct 293  Q
    ||||||||| |||||||| |||||||| ||||||||| |||||||||||        |||||||| ||||||||||| ||||||||||||||||||||||    
T  1151390 aggaaactttggggtgtaatggattagaattttaaaaaactattttaataaaataa-gtctttaagattttaaaagattgtgtgagattgtattgattct 1151488  T
Q  294 gtgagattttaa 305  Q
    ||||||||||||    
T  1151489 gtgagattttaa 1151500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 7947134 - 7947234
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||| ||||||||||||||||||||||||| |        |||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  7947134 ggggtgtattgaattaggattttaaaagactatttta-ttaaaaaaagtctttaagattttaaaagaccgtgtgagattgtattgattctgtgagatttt 7947232  T
Q  304 aa 305  Q
    ||    
T  7947233 aa 7947234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 39853446 - 39853346
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||||||||| |||||||||||||||||||||        |||||| | ||||||||||||| ||||||||||||||||||||||||||||||    
T  39853446 ggggtgtattggattagaattttaaaagactattttaatataaaaa-gtcttttagattttaaaagactctgtgagattgtattgattctgtgagatttt 39853348  T
Q  304 aa 305  Q
    ||    
T  39853347 aa 39853346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 4549364 - 4549466
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnng-tctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattt 302  Q
    |||||||||| ||||||||||||||||||||||||||||          ||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  4549364 ggggtgtattcgattaggattttaaaagactattttaataaaaaaaaaatctttaagattttaaaagattgtgtgagattgtattgattctgtgagattt 4549463  T
Q  303 taa 305  Q
    |||    
T  4549464 taa 4549466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 37014951 - 37014850
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||||||||| ||||||||||| |||||||||        |||||||| ||||||||| |||||| |||||||||| ||||||| ||||||||    
T  37014951 ggggtgtattggattagaattttaaaagattattttaataaaaaaaagtctttaagattttaaaatactgtgggagattgtatcgattctgggagatttt 37014852  T
Q  304 aa 305  Q
    ||    
T  37014851 aa 37014850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 305
Target Start/End: Complemental strand, 17519608 - 17519503
Alignment:
Q  199 acttaggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgag 298  Q
    |||||||| |||||||||||| |||||||||||||||||||| |         | ||| | ||||||||||||| ||| ||||| |||||||||||||||    
T  17519608 acttagggatgtattggattaagattttaaaagactattttagtaaaagaaatt-tttgatattttaaaagactttgtaagattttattgattctgtgag 17519510  T
Q  299 attttaa 305  Q
    |||||||    
T  17519509 attttaa 17519503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 5950163 - 5950112
Alignment:
Q  254 tttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||| ||||||||| | | ||||||||||||||||||||||||||||||||    
T  5950163 tttaagattttaaaatattatgtgagattgtattgattctgtgagattttaa 5950112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 5950506 - 5950470
Alignment:
Q  206 ggtgtattggattaggattttaaaagactattttaat 242  Q
    |||||||||||||| ||||||||||||||||||||||    
T  5950506 ggtgtattggattatgattttaaaagactattttaat 5950470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 240
Target Start/End: Original strand, 28593000 - 28593036
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactatttta 240  Q
    |||||||||||||||||||||||||||||| ||||||    
T  28593000 ggggtgtattggattaggattttaaaagacaatttta 28593036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 11432641 - 11432541
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11432641 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 11432543  T
Q  304 aa 305  Q
    ||    
T  11432542 aa 11432541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 36673260 - 36673360
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36673260 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 36673358  T
Q  304 aa 305  Q
    ||    
T  36673359 aa 36673360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 23752504 - 23752604
Alignment:
Q  205 gggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttta 304  Q
    |||||||||  |||||||||||||||||||||||||||        |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23752504 gggtgtatttaattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttta 23752603  T
Q  305 a 305  Q
    |    
T  23752604 a 23752604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 10728125 - 10728227
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnn-gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattt 302  Q
    |||||||||||||||||||||||||||||||||||||||         |||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  10728125 ggggtgtattggattaggattttaaaagactattttaataaaaaaaaagtctttaagattttaaaagaatgtgtgagattgtattgattctgtgagattt 10728224  T
Q  303 taa 305  Q
    |||    
T  10728225 taa 10728227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 17947314 - 17947212
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtcttt-aaaattttaaaagactgtgtgagattgtattgattctgtgagattt 302  Q
    |||||||||||||||||||||||||||||||||||||||         ||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  17947314 ggggtgtattggattaggattttaaaagactattttaataaaaaaaaatcttttaaaattttaaaagactatgtgagattgtattgattctgtgagattt 17947215  T
Q  303 taa 305  Q
    |||    
T  17947214 taa 17947212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 10661278 - 10661181
Alignment:
Q  208 tgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||||||||||||||||||||||||||||||||        |||||||| ||||||||||| |||||||||||||||||||||||||| |||||||    
T  10661278 tgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagattgtgtgagattgtattgattctgtgatattttaa 10661181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 45254555 - 45254655
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||| ||||||||||||||||||||||||||||         ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45254555 ggggtgtattagattaggattttaaaagactattttaataaaaaaaa-tctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 45254653  T
Q  304 aa 305  Q
    ||    
T  45254654 aa 45254655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 31645364 - 31645464
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||| ||||||||||||| ||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31645364 ggggtgtattggattaagattttaaaagacaattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 31645462  T
Q  304 aa 305  Q
    ||    
T  31645463 aa 31645464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 44904961 - 44905057
Alignment:
Q  208 tgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||||||||| ||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  44904961 tgtattggattaagattttaaaagactattttaataaaaaag-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaa 44905057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 52617087 - 52617187
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||| ||||||||        |||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  52617087 ggggtgtattggattaggattttaaaagacaattttaataaaaaaa-gtctttaagattttaaaagactttgtgagattgtattgattctgtgagatttt 52617185  T
Q  304 aa 305  Q
    ||    
T  52617186 aa 52617187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 203 - 305
Target Start/End: Original strand, 50761221 - 50761324
Alignment:
Q  203 aggggtgtattggattaggattttaaaagactattttaatnnnnnnnn-gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatt 301  Q
    ||||||||||||||||||||| ||||||||||||||||||         |||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  50761221 aggggtgtattggattaggatattaaaagactattttaataaaaaaaaagtctttaagattttaaaagattgtgtgagattgtattgattctgtgagatt 50761320  T
Q  302 ttaa 305  Q
    ||||    
T  50761321 ttaa 50761324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 18750729 - 18750627
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnng-tctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattt 302  Q
    ||||||||||| |||||||||||||||||||||||||||          ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18750729 ggggtgtattgaattaggattttaaaagactattttaataaaaaaaaaatctttaagattttaaaagactgtgtgagattgtattgattctgtgagattt 18750630  T
Q  303 taa 305  Q
    |||    
T  18750629 taa 18750627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 50902418 - 50902522
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnn---gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagat 300  Q
    |||||||||||||||| ||||||||||||||||||||||           |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  50902418 ggggtgtattggattaagattttaaaagactattttaataaaaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagat 50902517  T
Q  301 tttaa 305  Q
    |||||    
T  50902518 tttaa 50902522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 207 - 305
Target Start/End: Original strand, 51736870 - 51736968
Alignment:
Q  207 gtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||||||||||||||||||||| |||||||||||        |||||||| ||||||||||||| || |||||||||||||||||||||||||||||    
T  51736870 gtgtattggattaggattttaaaatactattttaataaaaaaaagtctttaagattttaaaagactatgcgagattgtattgattctgtgagattttaa 51736968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 39841555 - 39841656
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||| |||| ||||||||||||||||||||||        |||||||| |||||||||||||||| ||||||||||||||| |||||||||||    
T  39841555 ggggtgtattgaattatgattttaaaagactattttaataaaagaaagtctttaagattttaaaagactgtgcgagattgtattgattatgtgagatttt 39841654  T
Q  304 aa 305  Q
    ||    
T  39841655 aa 39841656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 200 - 305
Target Start/End: Complemental strand, 20833996 - 20833892
Alignment:
Q  200 cttaggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgaga 299  Q
    ||||| |||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||| ||||| |||||||||||||||||| |||    
T  20833996 cttagaggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagattgtgtaagattgtattgattctgtaaga 20833898  T
Q  300 ttttaa 305  Q
    ||||||    
T  20833897 ttttaa 20833892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 54629947 - 54629844
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnn--gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatt 301  Q
    |||||||||||||||||||||||||||||| ||||||||          |||||||| || |||||||||||||||||||||||||||||||||||||||    
T  54629947 ggggtgtattggattaggattttaaaagacaattttaataaaaaaaaaagtctttaagatgttaaaagactgtgtgagattgtattgattctgtgagatt 54629848  T
Q  302 ttaa 305  Q
    ||||    
T  54629847 ttaa 54629844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 305
Target Start/End: Original strand, 34483252 - 34483305
Alignment:
Q  252 tctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34483252 tctttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaa 34483305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 40898162 - 40898063
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||| |||||| |||||||||||||||||||||        |||||||| ||||||||||||||||||||||||  ||||||||||||||||||    
T  40898162 ggggtgtattcgattagaattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattg-cttgattctgtgagatttt 40898065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 39039168 - 39039070
Alignment:
Q  208 tgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaa-attttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||||||||| ||||||||||||| ||||||||        |||||| || |||||||| |||| ||||||||||||||||||||||||||||||||    
T  39039168 tgtattggattatgattttaaaagacaattttaataaaaaaaagtcttttaagattttaaatgactttgtgagattgtattgattctgtgagattttaa 39039070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 255 - 305
Target Start/End: Complemental strand, 52811425 - 52811375
Alignment:
Q  255 ttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  52811425 ttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaa 52811375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 50902516 - 50902561
Alignment:
Q  260 attttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  50902516 attttaaaagactgtgtgagattgtattgattctgtgagattttaa 50902561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 48380185 - 48380134
Alignment:
Q  254 tttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  48380185 tttaagattttaaaagattgtgtgagattgtattgattctgtgagattttaa 48380134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 291
Target Start/End: Original strand, 27239327 - 27239412
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgatt 291  Q
    |||||||||||||||||||||||||||||||||||||||        || ||||| ||||||||||||||||| ||||||||||||||    
T  27239327 ggggtgtattggattaggattttaaaagactattttaat-aaaaaaagt-tttaagattttaaaagactgtgtaagattgtattgatt 27239412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 305
Target Start/End: Complemental strand, 44708036 - 44707931
Alignment:
Q  200 cttagggg-tgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgag 298  Q
    |||||||| ||||||| |||| |||||||||||| |||||||||         ||||||| ||||||||||||| ||||||||||||  |||||||||||    
T  44708036 cttaggggatgtattgaattatgattttaaaagattattttaataaaaaaaa-tctttaagattttaaaagactttgtgagattgtaccgattctgtgag 44707938  T
Q  299 attttaa 305  Q
    |||||||    
T  44707937 attttaa 44707931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 37455928 - 37455892
Alignment:
Q  206 ggtgtattggattaggattttaaaagactattttaat 242  Q
    |||||||||||||||||||||||||||||||||||||    
T  37455928 ggtgtattggattaggattttaaaagactattttaat 37455892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 5493092 - 5493041
Alignment:
Q  254 tttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||||||||||| | ||||| ||||||||||||| ||||||||||||    
T  5493092 tttaaaattttaaaagattttgtgaaattgtattgattcagtgagattttaa 5493041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 34483193 - 34483236
Alignment:
Q  198 aacttaggggtgtattggattaggattttaaaagactattttaa 241  Q
    ||||||||||||||||| |||||||||||| |||||||||||||    
T  34483193 aacttaggggtgtattgaattaggattttacaagactattttaa 34483236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 45214139 - 45214184
Alignment:
Q  260 attttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||||    
T  45214139 attttaaaagactttgtgtgattgtattgattttgtgagattttaa 45214184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 48380243 - 48380206
Alignment:
Q  205 gggtgtattggattaggattttaaaagactattttaat 242  Q
    |||||||||||||||| |||||||||||||||||||||    
T  48380243 gggtgtattggattagaattttaaaagactattttaat 48380206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 239
Target Start/End: Complemental strand, 7319174 - 7319139
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactatttt 239  Q
    |||||||||||||||||||||||||||||| |||||    
T  7319174 ggggtgtattggattaggattttaaaagacaatttt 7319139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 239
Target Start/End: Original strand, 24149837 - 24149872
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactatttt 239  Q
    |||||||||||||||| |||||||||||||||||||    
T  24149837 ggggtgtattggattaagattttaaaagactatttt 24149872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 240
Target Start/End: Original strand, 45925777 - 45925820
Alignment:
Q  197 aaacttaggggtgtattggattaggattttaaaagactatttta 240  Q
    |||||||||||||| ||| |||||||||||||||||| ||||||    
T  45925777 aaacttaggggtgtgttgaattaggattttaaaagacaatttta 45925820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 29448433 - 29448471
Alignment:
Q  201 ttaggggtgtattggattaggattttaaaagactatttt 239  Q
    |||||||||||||||||||||||||||||| || |||||    
T  29448433 ttaggggtgtattggattaggattttaaaaaacaatttt 29448471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 305
Target Start/End: Original strand, 2124752 - 2124805
Alignment:
Q  252 tctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||| |||||||||||||||| |||  ||||||||||||| |||| ||||||||    
T  2124752 tcttgaaaattttaaaagactttgttggattgtattgattttgtgggattttaa 2124805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 232
Target Start/End: Complemental strand, 26108524 - 26108496
Alignment:
Q  204 ggggtgtattggattaggattttaaaaga 232  Q
    |||||||||||||||||||||||||||||    
T  26108524 ggggtgtattggattaggattttaaaaga 26108496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 27594034 - 27593998
Alignment:
Q  203 aggggtgtattggattaggattttaaaagactatttt 239  Q
    ||||||||||||||||  |||||||||||||||||||    
T  27594034 aggggtgtattggattgagattttaaaagactatttt 27593998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 9e-33; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 206 - 305
Target Start/End: Original strand, 29613906 - 29614005
Alignment:
Q  206 ggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29613906 ggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaa 29614005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 23102385 - 23102285
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23102385 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 23102287  T
Q  304 aa 305  Q
    ||    
T  23102286 aa 23102285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 198 - 305
Target Start/End: Complemental strand, 18839394 - 18839288
Alignment:
Q  198 aacttaggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtga 297  Q
    ||||||||||||||||||||||||||||||||||| |||||||||        |||||||| ||||||||||| ||||||||||||||||||||||||||    
T  18839394 aacttaggggtgtattggattaggattttaaaagattattttaataaaaaaa-gtctttaagattttaaaagattgtgtgagattgtattgattctgtga 18839296  T
Q  298 gattttaa 305  Q
    ||||||||    
T  18839295 gattttaa 18839288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 29894051 - 29893950
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||| |||||||||||||||||||| |||||||||||    
T  29894051 ggggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagattgtgtgagattgtattgattttgtgagatttt 29893952  T
Q  304 aa 305  Q
    ||    
T  29893951 aa 29893950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 3024018 - 3023919
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        || ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3024018 ggggtgtattggattaggattttaaaagactattttaataaaaaa--gtttttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 3023921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 205 - 305
Target Start/End: Complemental strand, 12741467 - 12741367
Alignment:
Q  205 gggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttta 304  Q
    ||||||||||||||| ||||||||||||||||||||||        |||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  12741467 gggtgtattggattaagattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattatgtgagatttta 12741368  T
Q  305 a 305  Q
    |    
T  12741367 a 12741367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 28343404 - 28343304
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||||||| |||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28343404 ggggtgtattggattgggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 28343306  T
Q  304 aa 305  Q
    ||    
T  28343305 aa 28343304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 30823681 - 30823581
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||| |||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30823681 ggggtgtattgaattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 30823583  T
Q  304 aa 305  Q
    ||    
T  30823582 aa 30823581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 510742 - 510640
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnn-gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattt 302  Q
    ||||||||||||||| |||||||||||||||||||||||         |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  510742 ggggtgtattggattgggattttaaaagactattttaataaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattt 510643  T
Q  303 taa 305  Q
    |||    
T  510642 taa 510640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 197 - 305
Target Start/End: Original strand, 37971497 - 37971606
Alignment:
Q  197 aaacttaggg--gtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctg 294  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||        |||||||| |||||||||||| ||||||||||||||||||||||    
T  37971497 aaacttagggaagtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagaccgtgtgagattgtattgattctg 37971595  T
Q  295 tgagattttaa 305  Q
    |||||||||||    
T  37971596 tgagattttaa 37971606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 21068452 - 21068350
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnn-gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattt 302  Q
    |||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  21068452 ggggtgtattggattaggattttaaaagactattttaataaaaaaaaagtctttaaaattttaaatgactgtgtgagattgtattgattatgttagattt 21068353  T
Q  303 taa 305  Q
    |||    
T  21068352 taa 21068350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 39785192 - 39785090
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnn-gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattt 302  Q
    |||||||||||||||||||||||||||||||||||||||         |||||||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  39785192 ggggtgtattggattaggattttaaaagactattttaataaaaaaaaagtctttaagattttaaaagactgtgcgagattgtattgattctgtgaaattt 39785093  T
Q  303 taa 305  Q
    |||    
T  39785092 taa 39785090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 9881401 - 9881500
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||| ||||||||         ||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  9881401 ggggtgtattggattaggattttaaaagacaattttaataaaaaat--tctttaagattttaaaagactgtgtgagattgtattgattctatgagatttt 9881498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 7994246 - 7994150
Alignment:
Q  208 tgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||||||||||||||||||| |||||||||        |||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  7994246 tgtattggattaggattttaaaagagtattttaataaagaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtaagattttaa 7994150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 203 - 305
Target Start/End: Original strand, 12893107 - 12893210
Alignment:
Q  203 aggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtcttt-aaaattttaaaagactgtgtgagattgtattgattctgtgagatt 301  Q
    |||||||||||||||||||||||||||| ||||||| |||        |||||| |||||||||||||||| |||||||||||||||||||| |||||||    
T  12893107 aggggtgtattggattaggattttaaaatactatttcaataaaaaaaggtcttttaaaattttaaaagactttgtgagattgtattgattctatgagatt 12893206  T
Q  302 ttaa 305  Q
    ||||    
T  12893207 ttaa 12893210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 198 - 305
Target Start/End: Complemental strand, 37328927 - 37328820
Alignment:
Q  198 aacttaggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtga 297  Q
    |||| |||||||||||||||||| |||||||||||||||||||||           ||||| |||| ||| |||||||||||||||||||||||||||||    
T  37328927 aactaaggggtgtattggattagaattttaaaagactattttaataaaaaaaaaaatttaagatttaaaaggactgtgtgagattgtattgattctgtga 37328828  T
Q  298 gattttaa 305  Q
    ||||||||    
T  37328827 gattttaa 37328820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 40459833 - 40459933
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgta-ttgattctgtgagattt 302  Q
    ||||||||||||||||| |||||||||||||||||||||        |||||||| ||||||||||||  |||||||||||| |||||||||||||||||    
T  40459833 ggggtgtattggattagaattttaaaagactattttaataaaaaaaagtctttaagattttaaaagac--tgtgagattgtatttgattctgtgagattt 40459930  T
Q  303 taa 305  Q
    |||    
T  40459931 taa 40459933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 28034286 - 28034340
Alignment:
Q  251 gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28034286 gtctttaaaattttaaaagactgtgtgagattgtattgattttgtgagattttaa 28034340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 48136362 - 48136462
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||| |||||||||||||||||||||||||||||||||         |||| || ||||||||| | ||||||||||||||||||||||||||||||||    
T  48136362 ggggtatattggattaggattttaaaagactattttaataaaaaaaa-tcttcaagattttaaaatattgtgtgagattgtattgattctgtgagatttt 48136460  T
Q  304 aa 305  Q
    ||    
T  48136461 aa 48136462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 39029147 - 39029047
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||||||||||||||||||||| |||||||||        |||||||| ||||||||| | ||||| |||||||||||||||||||| |||||    
T  39029147 ggggtgtattggattaggattttaaaagattattttaataaaaaaa-gtctttaagattttaaaatattgtgtaagattgtattgattctgtgaaatttt 39029049  T
Q  304 aa 305  Q
    ||    
T  39029048 aa 39029047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 305
Target Start/End: Complemental strand, 32884850 - 32884747
Alignment:
Q  207 gtgtattggattaggattttaaaagactattttaatnnnnnnnn-----gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatt 301  Q
    ||||||||||||| ||||||||||||||||||||||             |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  32884850 gtgtattggattaagattttaaaagactattttaataataaaaaaaaaagtctttaagattttaaaagactgtgtgaaattgtattgattctgtgagatt 32884751  T
Q  302 ttaa 305  Q
    ||||    
T  32884750 ttaa 32884747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 207 - 305
Target Start/End: Original strand, 46035452 - 46035550
Alignment:
Q  207 gtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||||||||||||||||||||||||||||||||          | ||||| ||||||||||||| ||||  ||||||||||||||||||||||||||    
T  46035452 gtgtattggattaggattttaaaagactattttaacaaaaaaagttttttaagattttaaaagactttgtggaattgtattgattctgtgagattttaa 46035550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 33383680 - 33383635
Alignment:
Q  260 attttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  33383680 attttaaaagactgtgtaagattgtattgattctgtgagattttaa 33383635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 33891402 - 33891447
Alignment:
Q  260 attttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  33891402 attttaaaagactatgtgagattgtattgattctgtgagattttaa 33891447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 44255947 - 44255992
Alignment:
Q  260 attttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  44255947 attttaaaagactgtgtgagattgtattgattctctgagattttaa 44255992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 3635225 - 3635187
Alignment:
Q  201 ttaggggtgtattggattaggattttaaaagactatttt 239  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  3635225 ttaggggtgtattggattaggattttaaaagacaatttt 3635187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 28034232 - 28034270
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaat 242  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  28034232 ggggtgtattgaattaggattttaaaagactattttaat 28034270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 47067788 - 47067746
Alignment:
Q  200 cttaggggtgtattggattaggattttaaaagactattttaat 242  Q
    ||||||||||||||| ||||| |||||||||||||||||||||    
T  47067788 cttaggggtgtattgaattagaattttaaaagactattttaat 47067746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 26183133 - 26183088
Alignment:
Q  260 attttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||||    
T  26183133 attttaaaagactttgtgggattgtattgattatgtgagattttaa 26183088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 46405302 - 46405339
Alignment:
Q  205 gggtgtattggattaggattttaaaagactattttaat 242  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  46405302 gggtgtattagattaggattttaaaagactattttaat 46405339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 33891384 - 33891416
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactat 236  Q
    |||||||||||||||||||||||||||||||||    
T  33891384 ggggtgtattggattaggattttaaaagactat 33891416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 234
Target Start/End: Complemental strand, 26183151 - 26183121
Alignment:
Q  204 ggggtgtattggattaggattttaaaagact 234  Q
    |||||||||||||||||||||||||||||||    
T  26183151 ggggtgtattggattaggattttaaaagact 26183121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 234
Target Start/End: Complemental strand, 33383698 - 33383668
Alignment:
Q  204 ggggtgtattggattaggattttaaaagact 234  Q
    |||||||||||||||||||||||||||||||    
T  33383698 ggggtgtattggattaggattttaaaagact 33383668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 27417703 - 27417748
Alignment:
Q  260 attttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||||||| ||| |||||||||||||| |||| ||||||||    
T  27417703 attttaaaagactttgttagattgtattgattttgtgggattttaa 27417748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 35089152 - 35089197
Alignment:
Q  260 attttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||||||| |||  ||||||||||||| |||||||||||||    
T  35089152 attttaaaagactttgttggattgtattgattttgtgagattttaa 35089197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 44255927 - 44255959
Alignment:
Q  202 taggggtgtattggattaggattttaaaagact 234  Q
    ||||||||||||| |||||||||||||||||||    
T  44255927 taggggtgtattgaattaggattttaaaagact 44255959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 232
Target Start/End: Complemental strand, 47879798 - 47879770
Alignment:
Q  204 ggggtgtattggattaggattttaaaaga 232  Q
    |||||||||||||||||||||||||||||    
T  47879798 ggggtgtattggattaggattttaaaaga 47879770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 232
Target Start/End: Complemental strand, 47914876 - 47914848
Alignment:
Q  204 ggggtgtattggattaggattttaaaaga 232  Q
    |||||||||||||||||||||||||||||    
T  47914876 ggggtgtattggattaggattttaaaaga 47914848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 36401 - 36501
Alignment:
Q  205 gggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttta 304  Q
    ||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  36401 gggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattatattgattctgtgagatttta 36500  T
Q  305 a 305  Q
    |    
T  36501 a 36501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 6e-31; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 27769158 - 27769058
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27769158 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 27769060  T
Q  304 aa 305  Q
    ||    
T  27769059 aa 27769058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 205 - 305
Target Start/End: Complemental strand, 32323163 - 32323063
Alignment:
Q  205 gggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttta 304  Q
    ||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  32323163 gggtgtattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagattgtgtgagattgtattgattctgtgagatttta 32323064  T
Q  305 a 305  Q
    |    
T  32323063 a 32323063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 32683135 - 32683235
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32683135 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 32683233  T
Q  304 aa 305  Q
    ||    
T  32683234 aa 32683235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 50019285 - 50019185
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50019285 ggggtgtattggattagaattttaaaagactattttaataaaaaaa-gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 50019187  T
Q  304 aa 305  Q
    ||    
T  50019186 aa 50019185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 48262169 - 48262069
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  48262169 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgaaattgtattgattctgtgagatttt 48262071  T
Q  304 aa 305  Q
    ||    
T  48262070 aa 48262069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 54342241 - 54342141
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||||||||| |||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  54342241 ggggtgtattggattagaattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 54342143  T
Q  304 aa 305  Q
    ||    
T  54342142 aa 54342141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 23988294 - 23988191
Alignment:
Q  201 ttaggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagat 300  Q
    ||||||||||||||||||||||||||||||||||||||||||         ||||||| ||||||||||| | |||||||||||||||||||||||||||    
T  23988294 ttaggggtgtattggattaggattttaaaagactattttaataaaaaaaa-tctttaagattttaaaagaatatgtgagattgtattgattctgtgagat 23988196  T
Q  301 tttaa 305  Q
    |||||    
T  23988195 tttaa 23988191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 29649131 - 29649230
Alignment:
Q  205 gggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttta 304  Q
    ||||| ||||||||||||||||||||||||||||||||        |||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  29649131 gggtgaattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctatgagatttta 29649229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 49833973 - 49834073
Alignment:
Q  205 gggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttta 304  Q
    |||| |||||||||||||||||||||||||||||||||        |||||||| ||||||||||| | |||||||||||||||||| ||||||||||||    
T  49833973 gggtatattggattaggattttaaaagactattttaataaaaaaaagtctttaagattttaaaagattatgtgagattgtattgattttgtgagatttta 49834072  T
Q  305 a 305  Q
    |    
T  49834073 a 49834073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 5442485 - 5442387
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||  |||||||||||||||||| |||||||||||    
T  5442485 ggggtgtattggattaggattttaaaagactattttaat-aaaaaaagtctttaagattttaaaagac--tgtgagattgtattgattttgtgagatttt 5442389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 41726203 - 41726100
Alignment:
Q  201 ttaggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagat 300  Q
    |||| |||||||||||||| ||||||||||||||||||||||        |||||||| ||||||||||| ||| |||||||||||||||| ||||||||    
T  41726203 ttagaggtgtattggattatgattttaaaagactattttaataaaaaat-gtctttaagattttaaaagattgtttgagattgtattgattatgtgagat 41726105  T
Q  301 tttaa 305  Q
    |||||    
T  41726104 tttaa 41726100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 201 - 305
Target Start/End: Original strand, 48531918 - 48532021
Alignment:
Q  201 ttaggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagat 300  Q
    |||||| |||||| ||||||||||||||||||||||||||||        |||||||| ||||||||||| | ||| |||||||||||||||||||||||    
T  48531918 ttagggttgtatttgattaggattttaaaagactattttaataaaataa-gtctttaagattttaaaagattctgtaagattgtattgattctgtgagat 48532016  T
Q  301 tttaa 305  Q
    |||||    
T  48532017 tttaa 48532021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 305
Target Start/End: Original strand, 37827533 - 37827636
Alignment:
Q  206 ggtgtattggattaggattttaaaagactattttaatnnnnnnnn----gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatt 301  Q
    ||||||||||||||| |||||||||||||||||||||            |||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  37827533 ggtgtattggattagaattttaaaagactattttaataaaaaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctctgagatt 37827632  T
Q  302 ttaa 305  Q
    ||||    
T  37827633 ttaa 37827636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 38234697 - 38234597
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||||||||||||||||||||||| ||||||         |||||||| ||||||||||||| |||| ||||||||||||||||| |||||||    
T  38234697 ggggtgtattggattaggattttaaaagacttttttaa-caaaaaaagtctttaagattttaaaagactttgtgggattgtattgattctgtaagatttt 38234599  T
Q  304 aa 305  Q
    ||    
T  38234598 aa 38234597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 49500640 - 49500740
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||||||||| ||||| |||||||||||||||         ||||||| |||||||||||||||| ||||||||||||||||||||| |||||    
T  49500640 ggggtgtattggattagaattttgaaagactattttaataaataaaa-tctttaagattttaaaagactgtgcgagattgtattgattctgtgaaatttt 49500738  T
Q  304 aa 305  Q
    ||    
T  49500739 aa 49500740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 5801753 - 5801699
Alignment:
Q  251 gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  5801753 gtctttgagattttaaaagactgtgtgagattgtattgattctgtgagattttaa 5801699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 30966185 - 30966285
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||| |||||||||| |||||||||||| |||||||||        |||||||| ||||||||||| ||| ||||||| |||||||||| |||||||||    
T  30966185 ggggtatattggattatgattttaaaagattattttaataaaaaat-gtctttaagattttaaaagattgtatgagattatattgattctatgagatttt 30966283  T
Q  304 aa 305  Q
    ||    
T  30966284 aa 30966285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 305
Target Start/End: Complemental strand, 28484916 - 28484866
Alignment:
Q  255 ttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  28484916 ttaaaattttaaaagattgtgtgaaattgtattgattttgtgagattttaa 28484866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 51321904 - 51321850
Alignment:
Q  251 gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||| |||||||    
T  51321904 gtctttaagattttaaacgactatgtgagattgtattgattctgtgaaattttaa 51321850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 37916902 - 37916864
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaat 242  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  37916902 ggggtgtattggattaggattttaagagactattttaat 37916864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 51321961 - 51321923
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaat 242  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  51321961 ggggtgtattggattaggattttaaaatactattttaat 51321923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 288
Target Start/End: Complemental strand, 37916844 - 37916808
Alignment:
Q  252 tctttaaaattttaaaagactgtgtgagattgtattg 288  Q
    ||||||| |||||||||||||||||||||||||||||    
T  37916844 tctttaagattttaaaagactgtgtgagattgtattg 37916808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 239
Target Start/End: Complemental strand, 5105036 - 5105001
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactatttt 239  Q
    |||||||||||||||||||||||||||||| |||||    
T  5105036 ggggtgtattggattaggattttaaaagacaatttt 5105001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 234
Target Start/End: Original strand, 54852661 - 54852691
Alignment:
Q  204 ggggtgtattggattaggattttaaaagact 234  Q
    |||||||||||||||||||||||||||||||    
T  54852661 ggggtgtattggattaggattttaaaagact 54852691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 233
Target Start/End: Complemental strand, 16019942 - 16019913
Alignment:
Q  204 ggggtgtattggattaggattttaaaagac 233  Q
    ||||||||||||||||||||||||||||||    
T  16019942 ggggtgtattggattaggattttaaaagac 16019913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 25446750 - 25446714
Alignment:
Q  203 aggggtgtattggattaggattttaaaagactatttt 239  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  25446750 aggggtgtattggattaggattttaaaggacaatttt 25446714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 240
Target Start/End: Original strand, 37369432 - 37369468
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactatttta 240  Q
    ||||||||||||||||||||||||||| || ||||||    
T  37369432 ggggtgtattggattaggattttaaaaaacaatttta 37369468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 6e-31; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 18178366 - 18178266
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18178366 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 18178268  T
Q  304 aa 305  Q
    ||    
T  18178267 aa 18178266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 26789879 - 26789779
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26789879 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 26789781  T
Q  304 aa 305  Q
    ||    
T  26789780 aa 26789779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 25289249 - 25289149
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||         ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25289249 ggggtgtattggattaggattttaaaagactattttaataaaaaaaa-tctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 25289151  T
Q  304 aa 305  Q
    ||    
T  25289150 aa 25289149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 43079576 - 43079477
Alignment:
Q  206 ggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||||||||| |||||||||||||||||||||        |||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  43079576 ggtgtattggattagaattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattatgtgagattttaa 43079477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 203 - 305
Target Start/End: Complemental strand, 28845673 - 28845572
Alignment:
Q  203 aggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattt 302  Q
    ||||||||||||||||||||||||||||||||||||||||        |||||||| ||||| ||||||| |||||||||||||||||||||||||||||    
T  28845673 aggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagatttttaaagactatgtgagattgtattgattctgtgagattt 28845575  T
Q  303 taa 305  Q
    |||    
T  28845574 taa 28845572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 13832669 - 13832769
Alignment:
Q  205 gggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttta 304  Q
    |||||||||  |||||||||||||||||||||||||||         ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13832669 gggtgtattcaattaggattttaaaagactattttaataaaaaaaaatctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttta 13832768  T
Q  305 a 305  Q
    |    
T  13832769 a 13832769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 210 - 306
Target Start/End: Complemental strand, 7027993 - 7027898
Alignment:
Q  210 tattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaat 306  Q
    ||||||||||||||||||||||| |||||||||        |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7027993 tattggattaggattttaaaagattattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaat 7027898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 33136691 - 33136588
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnn--gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatt 301  Q
    |||||||||||||||||||||||||||||| ||||||||          |||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  33136691 ggggtgtattggattaggattttaaaagacaattttaataaaaaaaaaagtctttaagattttaaaagactgtgtgagattgtattgattctatgagatt 33136592  T
Q  302 ttaa 305  Q
    ||||    
T  33136591 ttaa 33136588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 3464681 - 3464581
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||| ||||||||||||||        |||||||| ||||||||||||||||| ||||| |||||||| |||||||||||    
T  3464681 ggggtgtattggattaggattttacaagactattttaattaaaaaa-gtctttaagattttaaaagactgtgtcagattctattgattttgtgagatttt 3464583  T
Q  304 aa 305  Q
    ||    
T  3464582 aa 3464581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 10658524 - 10658424
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||         | ||||| ||||||||||||||| |||||||||||||||| |||||| ||||    
T  10658524 ggggtgtattggattaggattttaaaagactattttaataaaaaagtct-tttaagattttaaaagactgtatgagattgtattgattttgtgagttttt 10658426  T
Q  304 aa 305  Q
    ||    
T  10658425 aa 10658424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 214625 - 214663
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaat 242  Q
    |||||||||||||||||||||||||||||||||||||||    
T  214625 ggggtgtattggattaggattttaaaagactattttaat 214663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 380004 - 379966
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaat 242  Q
    |||||||||||||||||||||||||||||||||||||||    
T  380004 ggggtgtattggattaggattttaaaagactattttaat 379966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 28739187 - 28739232
Alignment:
Q  260 attttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||||||||| || ||||||||||||||||||||||||||||||    
T  28739187 attttaaaagaccgtctgagattgtattgattctgtgagattttaa 28739232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 239
Target Start/End: Original strand, 20156344 - 20156379
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactatttt 239  Q
    ||||||||||||||||||||||||||||||||||||    
T  20156344 ggggtgtattggattaggattttaaaagactatttt 20156379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 30239161 - 30239199
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaat 242  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  30239161 ggggtgtattggattatgattttaaaagactattttaat 30239199  T

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Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 3576800 - 3576753
Alignment:
Q  257 aaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||| ||||||| |||||||||||||||||| |||||||||||||||||    
T  3576800 aaaaatttaaaa-actgtgtgagattgtattaattctgtgagattttaa 3576753  T

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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 242
Target Start/End: Complemental strand, 2374067 - 2374033
Alignment:
Q  208 tgtattggattaggattttaaaagactattttaat 242  Q
    ||||||| |||||||||||||||||||||||||||    
T  2374067 tgtattgtattaggattttaaaagactattttaat 2374033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 229
Target Start/End: Complemental strand, 12408048 - 12408018
Alignment:
Q  199 acttaggggtgtattggattaggattttaaa 229  Q
    |||||||||||||||||||||||||||||||    
T  12408048 acttaggggtgtattggattaggattttaaa 12408018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 229
Target Start/End: Complemental strand, 12420108 - 12420078
Alignment:
Q  199 acttaggggtgtattggattaggattttaaa 229  Q
    |||||||||||||||||||||||||||||||    
T  12420108 acttaggggtgtattggattaggattttaaa 12420078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 45547946 - 45547901
Alignment:
Q  260 attttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||||||||| |||  ||||||||||||| |||||||||||||    
T  45547946 attttaaaagactttgttggattgtattgattttgtgagattttaa 45547901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 232
Target Start/End: Original strand, 1188676 - 1188704
Alignment:
Q  204 ggggtgtattggattaggattttaaaaga 232  Q
    |||||||||||||||||||||||||||||    
T  1188676 ggggtgtattggattaggattttaaaaga 1188704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 242
Target Start/End: Complemental strand, 3576843 - 3576811
Alignment:
Q  210 tattggattaggattttaaaagactattttaat 242  Q
    ||||||||||||||||||||||| |||||||||    
T  3576843 tattggattaggattttaaaagattattttaat 3576811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 34027516 - 34027552
Alignment:
Q  203 aggggtgtattggattaggattttaaaagactatttt 239  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  34027516 aggggtgtatttgattaggattttaaaagattatttt 34027552  T

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Target: scaffold0940 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 3574 - 3674
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  3574 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaagagactgtgtgagattgtattgattctgtgagatttt 3672  T
Q  304 aa 305  Q
    ||    
T  3673 aa 3674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 30384172 - 30384272
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        | |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30384172 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gcctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 30384270  T
Q  304 aa 305  Q
    ||    
T  30384271 aa 30384272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 31068514 - 31068414
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  31068514 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgatatttt 31068416  T
Q  304 aa 305  Q
    ||    
T  31068415 aa 31068414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 31896731 - 31896631
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    |||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  31896731 ggggtgtattggattaggattttaaaagactattttaataaaaaaa-gtctttaagattttaaaatactgtgtgagattgtattgattctgtgagatttt 31896633  T
Q  304 aa 305  Q
    ||    
T  31896632 aa 31896631  T

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Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 14261552 - 14261651
Alignment:
Q  205 gggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttta 304  Q
    ||||||||||||||| ||||||||||||| ||||||||        |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14261552 gggtgtattggattatgattttaaaagacaattttaataaaaaaa-gtctttaagattttaaaagactgtgtgagattgtattgattctgtgagatttta 14261650  T

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Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 4199587 - 4199688
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||||||||||||||||||| |||||||||||           ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4199587 ggggtgtattggattaggattttaaaacactattttaataaaaaaagtcttttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 4199686  T
Q  304 aa 305  Q
    ||    
T  4199687 aa 4199688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 7104618 - 7104518
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||||||||||||||||||||||| ||||||         |||||||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  7104618 ggggtgtattggattaggattttaaaagacttttttaa-caaaaaaagtctttaagattttaaaagactttgtgggattgtattgattctgtgagatttt 7104520  T
Q  304 aa 305  Q
    ||    
T  7104519 aa 7104518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 8790012 - 8790112
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||||||||||||||||||||||| ||||||         |||||||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  8790012 ggggtgtattggattaggattttaaaagacttttttaa-caaaaaaagtctttaagattttaaaagactttgtgggattgtattgattctgtgagatttt 8790110  T
Q  304 aa 305  Q
    ||    
T  8790111 aa 8790112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 7498194 - 7498084
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaat---------nnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctg 294  Q
    |||||||||||||||||||||||||||||||||||||||                 |||||||| ||||||||||| |||||||||||||||||||||||    
T  7498194 ggggtgtattggattaggattttaaaagactattttaataaaaaaaaaaaaaaaaagtctttaagattttaaaagattgtgtgagattgtattgattctg 7498095  T
Q  295 tgagattttaa 305  Q
    |||||||||||    
T  7498094 tgagattttaa 7498084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 34774433 - 34774379
Alignment:
Q  251 gtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  34774433 gtctttaagattttaaaagactgtgtaagattgtattgattctgtgagattttaa 34774379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 305
Target Start/End: Original strand, 27585232 - 27585285
Alignment:
Q  252 tctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  27585232 tctttaagattttaaaagactgtgtgagattttattgattctgtgagattttaa 27585285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 23929410 - 23929374
Alignment:
Q  203 aggggtgtattggattaggattttaaaagactatttt 239  Q
    ||||||||||||||||||||||||||||||| |||||    
T  23929410 aggggtgtattggattaggattttaaaagacaatttt 23929374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 57170 - 57270
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttt 303  Q
    ||||||||||||||||| |||||||||||||||||||||        ||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  57170 ggggtgtattggattagaattttaaaagactattttaataaaaaaa-gtccttaagattttaaaagactgtgtgagattgtattgattctgtgagatttt 57268  T
Q  304 aa 305  Q
    ||    
T  57269 aa 57270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 3114 - 3214
Alignment:
Q  205 gggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagatttta 304  Q
    ||||||||| ||||| ||||||||||||||||||||||        |||||||| |||||||||||||||||||||||||||| ||| ||||||||||||    
T  3114 gggtgtattagattaagattttaaaagactattttaataaaaaaaagtctttaagattttaaaagactgtgtgagattgtattaattatgtgagatttta 3213  T
Q  305 a 305  Q
    |    
T  3214 a 3214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1521 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1521
Description:

Target: scaffold1521; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 1292 - 1393
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctt-taaaattttaaaagactgtgtgagattgtattgattctgtgagattt 302  Q
    |||| |||||| |||||||||||||||||||||||||||        ||||| ||| ||||| |||||| ||||||||||||||||||||||||||||||    
T  1292 ggggagtattgaattaggattttaaaagactattttaataaaaaaa-gtcttataagatttttaaagaccgtgtgagattgtattgattctgtgagattt 1390  T
Q  303 taa 305  Q
    |||    
T  1391 taa 1393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 16147 - 16248
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctt-taaaattttaaaagactgtgtgagattgtattgattctgtgagattt 302  Q
    |||| |||||| |||||||||||||||||||||||||||        ||||| ||| ||||| |||||| ||||||||||||||||||||||||||||||    
T  16147 ggggagtattgaattaggattttaaaagactattttaataaaaaaa-gtcttataagatttttaaagaccgtgtgagattgtattgattctgtgagattt 16245  T
Q  303 taa 305  Q
    |||    
T  16246 taa 16248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 305
Target Start/End: Complemental strand, 29427 - 29326
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctt-taaaattttaaaagactgtgtgagattgtattgattctgtgagattt 302  Q
    |||| |||||| |||||||||||||||||||||||||||        ||||| ||| ||||| |||||| ||||||||||||||||||||||||||||||    
T  29427 ggggagtattgaattaggattttaaaagactattttaataaaaaaa-gtcttataagatttttaaagaccgtgtgagattgtattgattctgtgagattt 29329  T
Q  303 taa 305  Q
    |||    
T  29328 taa 29326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 20430 - 20475
Alignment:
Q  260 attttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||    
T  20430 atttttaaagaccgtgtgagattgtattgattctgtgagattttaa 20475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 21865 - 21767
Alignment:
Q  206 ggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaa 305  Q
    |||||||||||||| |||||||||||| |||||||||        |||||||| ||||||||||||| || || ||||||||||| ||||||||||||||    
T  21865 ggtgtattggattaagattttaaaagattattttaatacaaaaa-gtctttaacattttaaaagactctgggatattgtattgatcctgtgagattttaa 21767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 38750 - 38853
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactattttaatnnnnnnnngtctttaaaattttaaaagactg-----tgtgagattgtattgattctgtgag 298  Q
    ||||||||||||||||||||||||||||||||  |||||        || ||||| ||||||||||||||     |||||||||||||||||||||||||    
T  38750 ggggtgtattggattaggattttaaaagacta--ttaat-aaaaaaagtttttaagattttaaaagactgtgtgatgtgagattgtattgattctgtgag 38846  T
Q  299 attttaa 305  Q
    |||||||    
T  38847 attttaa 38853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 12130 - 12094
Alignment:
Q  204 ggggtgtattggattaggattttaaaagactatttta 240  Q
    |||||||||||||||||||||||||||||||||||||    
T  12130 ggggtgtattggattaggattttaaaagactatttta 12094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 10860 - 10898
Alignment:
Q  201 ttaggggtgtattggattaggattttaaaagactatttt 239  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  10860 ttaggggtgtattggattaggattttaaaagacaatttt 10898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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