View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14752_low_16 (Length: 297)
Name: NF14752_low_16
Description: NF14752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14752_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 79 - 287
Target Start/End: Original strand, 16011640 - 16011848
Alignment:
| Q |
79 |
aatatacaattaaaaaacaaagtaaaggtaatgttaagttagttggttgacgtggaagcagttgaagaagcgcgccaatatctcatcccctttccttcaa |
178 |
Q |
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| T |
16011640 |
aatatacaattaaaaaacaaagtaaaggtaatgttaagttagttggttgacgtggaagccgttcaagaagcgcgccaatatctcatcccctttccttcaa |
16011739 |
T |
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| Q |
179 |
cgaaacattcgcatcttctctttctctctcaatttctcaatccaatcttgctcatcacacacttgttcatgcaaatctcacacgtagaaagaatgacgct |
278 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
16011740 |
cgaaacattcgcatcttctctttctctctcaatttctcaatccaatcttgctcatcacacacttgttcaagcaaatctcacacgtagaaagaatgacgct |
16011839 |
T |
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| Q |
279 |
tgacctttg |
287 |
Q |
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| T |
16011840 |
tgacctttg |
16011848 |
T |
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