View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14754_low_7 (Length: 287)
Name: NF14754_low_7
Description: NF14754
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14754_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 18 - 284
Target Start/End: Original strand, 14325199 - 14325465
Alignment:
| Q |
18 |
gtctctaataatgaaactcaaattaaggatcaataaaataaaattaatctaatccactaatcacttcaagccaaagcaaacactacagtctcatcctctt |
117 |
Q |
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| T |
14325199 |
gtctgtaataatgaaactcaaattaaggatcaataaaaaaaaattaatttaatccactaatcactgcaagccaaagcaaacactacagtatcatcctctt |
14325298 |
T |
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| Q |
118 |
ttctttatatagta-aaaatcattattcttttagacgtgttagaatgtcattcctcaatcactggctccaatccctagaatcatacattgtttatatgat |
216 |
Q |
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||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14325299 |
ttctttata--gtacaaaatcattattcttttagacgtgttagaatgtcattcctcaatcactggctccaatccctagaatcatacattgtttatatgat |
14325396 |
T |
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| Q |
217 |
tcccaaaca-cagatgaattccccctgaccagtgaccactatactattgataacatttgttttgccttt |
284 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14325397 |
tcccaaacaccagatgaattccccctgaccagtgaccactatactattgataacatttgttttgccttt |
14325465 |
T |
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